Metagenome Family F076190

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076190
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	58 residues
Representative Sequence	VRTAGGSITISVKNVFTAASRVSGRVWSLVRITVPNDLKFVKIRVEKPQNNSLYPYFQREPL
Number of Associated Samples	108
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	75.42 %
% of genes from short scaffolds (< 2000 bps)	55.93 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.831 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal (30.508 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal distal gut (55.932 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.56% β-sheet: 13.33% Coil/Unstructured: 71.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF02498	Bro-N	11.02
PF14195	DUF4316	9.32
PF03432	Relaxase	8.47
PF05713	MobC	3.39
PF02518	HATPase_c	1.69
PF01381	HTH_3	1.69
PF14130	Cap4_nuclease	1.69
PF12728	HTH_17	1.69
PF00486	Trans_reg_C	1.69
PF08281	Sigma70_r4_2	1.69
PF02361	CbiQ	0.85
PF14193	DUF4315	0.85
PF04963	Sigma54_CBD	0.85
PF13538	UvrD_C_2	0.85
PF02810	SEC-C	0.85
PF00069	Pkinase	0.85
PF00082	Peptidase_S8	0.85
PF13175	AAA_15	0.85
PF00004	AAA	0.85
PF00664	ABC_membrane	0.85
PF01131	Topoisom_bac	0.85
PF05168	HEPN	0.85
PF13307	Helicase_C_2	0.85
PF00145	DNA_methylase	0.85
PF13586	DDE_Tnp_1_2	0.85
PF14196	ATC_hydrolase	0.85
PF13610	DDE_Tnp_IS240	0.85
PF12725	DUF3810	0.85
PF12685	SpoIIIAH	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG3617	Prophage antirepressor	Mobilome: prophages, transposons [X]	11.02
COG3843	Type IV secretory pathway, VirD2 component (relaxase)	Intracellular trafficking, secretion, and vesicular transport [U]	8.47
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.39
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.85
COG0550	DNA topoisomerase IA	Replication, recombination and repair [L]	0.85
COG0619	ECF-type transporter transmembrane protein EcfT	Coenzyme transport and metabolism [H]	0.85
COG1110	Reverse gyrase	Replication, recombination and repair [L]	0.85
COG1508	DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog	Transcription [K]	0.85
COG1895	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.85
COG2250	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.83 %
Unclassified	root	N/A	10.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.83 %
Unclassified	root	N/A	10.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.83 %
Unclassified	root	N/A	10.17 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	69.49 %
Unclassified	root	N/A	10.17 %

Name	Rank	Taxonomy	Distribution
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	68.64 %
Unclassified	root	N/A	10.17 %

Name	Rank	Taxonomy	Distribution
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	62.71 %
Unclassified	root	N/A	10.17 %

Name	Rank	Taxonomy	Distribution
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	62.71 %
Unclassified	root	N/A	10.17 %

Name	Rank	Taxonomy	Distribution
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	15.25 %
Unclassified	root	N/A	10.17 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	1.69 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	1.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.17 %
Enterocloster	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Enterocloster	1.69 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	1.69 %
unclassified Lachnospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae	1.69 %
Ruminococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus	1.69 %
Dorea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Dorea	0.85 %
Johnsonella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Johnsonella	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.17 %
unclassified Clostridium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium	1.69 %
Lachnospiraceae bacterium MD335	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium MD335	1.69 %
Enterocloster asparagiformis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Enterocloster → Enterocloster asparagiformis	1.69 %
unclassified Ruminococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus → unclassified Ruminococcus	0.85 %
Ruminococcus bicirculans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus → Ruminococcus bicirculans	0.85 %
Dorea formicigenerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Dorea → Dorea formicigenerans	0.85 %
Johnsonella ignava	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Johnsonella → Johnsonella ignava	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.17 %
Lachnospiraceae bacterium MD335	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium MD335	1.69 %
Ruminococcus sp. YE71	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus → unclassified Ruminococcus → Ruminococcus sp. YE71	0.85 %
Clostridium sp. ATCC BAA-442	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. ATCC BAA-442	0.85 %
[Clostridium] asparagiforme DSM 15981	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Enterocloster → Enterocloster asparagiformis → [Clostridium] asparagiforme DSM 15981	0.85 %
Clostridium sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp.	0.85 %
Ruminococcus bicirculans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus → Ruminococcus bicirculans	0.85 %
Dorea formicigenerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Dorea → Dorea formicigenerans	0.85 %
Johnsonella ignava	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Johnsonella → Johnsonella ignava	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000359\|EM204_1015197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium MD335	5476	Open in IMG/M
3300000360\|EM205_1071476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Johnsonella → Johnsonella ignava	1311	Open in IMG/M
3300001525\|chfec4_10012629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	2862	Open in IMG/M
3300005461\|Ga0073906_1169685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	606	Open in IMG/M
3300006257\|Ga0099346_100244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	61192	Open in IMG/M
3300007368\|Ga0104977_1027127	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300007641\|Ga0105527_113994	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300007793\|Ga0105888_106073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	4154	Open in IMG/M
3300007796\|Ga0105889_106317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	3876	Open in IMG/M
3300007796\|Ga0105889_108341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2733	Open in IMG/M
3300007804\|Ga0105665_122869	Not Available	547	Open in IMG/M
3300007921\|Ga0111562_142165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	529	Open in IMG/M
3300008077\|Ga0105964_1004989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	5688	Open in IMG/M
3300008079\|Ga0105956_106309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2434	Open in IMG/M
3300008096\|Ga0114155_1057371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	593	Open in IMG/M
3300008103\|Ga0114180_102423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	11110	Open in IMG/M
3300008103\|Ga0114180_102910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	9138	Open in IMG/M
3300008268\|Ga0111491_1006031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	5661	Open in IMG/M
3300008272\|Ga0111092_1034823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	868	Open in IMG/M
3300008360\|Ga0114875_1051553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium MD335	546	Open in IMG/M
3300008520\|Ga0111044_111455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp.	2347	Open in IMG/M
3300008523\|Ga0115231_1038842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Enterocloster → Enterocloster asparagiformis → [Clostridium] asparagiforme DSM 15981	614	Open in IMG/M
3300008622\|Ga0111363_114397	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300008640\|Ga0111422_106312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3324	Open in IMG/M
3300008725\|Ga0115670_1016802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1821	Open in IMG/M
3300008728\|Ga0115675_115589	All Organisms → cellular organisms → Bacteria	1755	Open in IMG/M
3300010262\|Ga0129317_1000243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	65841	Open in IMG/M
3300010266\|Ga0129314_1018118	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300010266\|Ga0129314_1026881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1317	Open in IMG/M
3300013382\|Ga0116618_102355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Enterocloster → Enterocloster asparagiformis	4234	Open in IMG/M
3300013940\|Ga0117807_1026244	Not Available	790	Open in IMG/M
3300014028\|Ga0117810_1025418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1022	Open in IMG/M
3300014028\|Ga0117810_1071373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	541	Open in IMG/M
3300014039\|Ga0116646_1021846	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1507	Open in IMG/M
3300014538\|Ga0134452_113143	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300014565\|Ga0169881_133596	Not Available	532	Open in IMG/M
3300014744\|Ga0134393_100232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	21558	Open in IMG/M
3300014767\|Ga0134506_127693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	642	Open in IMG/M
3300014799\|Ga0134377_1013368	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300014939\|Ga0134458_119428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	661	Open in IMG/M
3300014939\|Ga0134458_120908	Not Available	626	Open in IMG/M
3300014940\|Ga0169849_100117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	79527	Open in IMG/M
3300014954\|Ga0169837_106796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2694	Open in IMG/M
3300014963\|Ga0134523_1021215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	2951	Open in IMG/M
3300021400\|Ga0224422_10481812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Dorea → Dorea formicigenerans	1554	Open in IMG/M
3300023491\|Ga0257045_103796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	6263	Open in IMG/M
3300023538\|Ga0257033_12213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	5686	Open in IMG/M
3300029024\|Ga0169709_117466	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300029032\|Ga0169753_109700	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300029042\|Ga0169701_123007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1125	Open in IMG/M
3300029043\|Ga0169613_130595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	615	Open in IMG/M
3300029050\|Ga0169629_137955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	628	Open in IMG/M
3300029057\|Ga0169682_119582	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300029092\|Ga0169182_116483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1575	Open in IMG/M
3300029106\|Ga0169216_101585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	13255	Open in IMG/M
3300029113\|Ga0168853_102229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	12358	Open in IMG/M
3300029119\|Ga0168816_107204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	4172	Open in IMG/M
3300029120\|Ga0168814_106886	All Organisms → cellular organisms → Bacteria	3175	Open in IMG/M
3300029122\|Ga0168799_1035170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	866	Open in IMG/M
3300029131\|Ga0168790_100229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	70505	Open in IMG/M
3300029215\|Ga0167476_102063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	9093	Open in IMG/M
3300029220\|Ga0168707_106091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3452	Open in IMG/M
3300029250\|Ga0167474_1015063	All Organisms → cellular organisms → Bacteria	1896	Open in IMG/M
3300029250\|Ga0167474_1015912	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300029250\|Ga0167474_1019878	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300029254\|Ga0168700_1060033	Not Available	616	Open in IMG/M
3300029313\|Ga0242781_100374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	72457	Open in IMG/M
3300029335\|Ga0243762_107136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	5671	Open in IMG/M
3300029339\|Ga0242823_1007460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	4017	Open in IMG/M
3300029339\|Ga0242823_1021412	Not Available	1431	Open in IMG/M
3300029343\|Ga0243725_1013055	All Organisms → cellular organisms → Bacteria	3369	Open in IMG/M
3300029358\|Ga0243818_1000392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus → Ruminococcus bicirculans	66503	Open in IMG/M
3300029359\|Ga0243835_1003664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	8973	Open in IMG/M
3300029364\|Ga0243886_1003339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	7480	Open in IMG/M
3300029365\|Ga0243866_1024329	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300029379\|Ga0243906_1013416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2721	Open in IMG/M
3300029381\|Ga0243902_1008431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	5328	Open in IMG/M
3300029388\|Ga0243998_1011318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2307	Open in IMG/M
3300029445\|Ga0243741_1052777	Not Available	733	Open in IMG/M
3300029474\|Ga0244136_112229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1551	Open in IMG/M
3300029478\|Ga0244154_102540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	8333	Open in IMG/M
3300029503\|Ga0244781_103018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. ATCC BAA-442	8401	Open in IMG/M
3300029536\|Ga0244918_107188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2777	Open in IMG/M
3300029551\|Ga0245011_111906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1231	Open in IMG/M
3300029555\|Ga0245053_105285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3871	Open in IMG/M
3300029575\|Ga0244903_102754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	11406	Open in IMG/M
3300029588\|Ga0245111_1012718	All Organisms → cellular organisms → Bacteria	2689	Open in IMG/M
3300029589\|Ga0245106_160286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	535	Open in IMG/M
3300029593\|Ga0245135_121769	Not Available	986	Open in IMG/M
3300029611\|Ga0245149_116662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1415	Open in IMG/M
3300029622\|Ga0245124_1015385	Not Available	2617	Open in IMG/M
3300029623\|Ga0245138_1047013	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300029656\|Ga0245165_100588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	40789	Open in IMG/M
3300029682\|Ga0242767_118604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	801	Open in IMG/M
3300029714\|Ga0245242_1014574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus → unclassified Ruminococcus → Ruminococcus sp. YE71	2385	Open in IMG/M
3300029714\|Ga0245242_1044666	Not Available	778	Open in IMG/M
3300029716\|Ga0245260_1065518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	562	Open in IMG/M
3300029742\|Ga0245239_101813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	18289	Open in IMG/M
3300029746\|Ga0245173_135795	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300029790\|Ga0242825_1020483	Not Available	1469	Open in IMG/M
3300029794\|Ga0243854_1024464	All Organisms → cellular organisms → Bacteria	1700	Open in IMG/M
3300029849\|Ga0245286_115981	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300029859\|Ga0245304_102821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	10905	Open in IMG/M
3300029871\|Ga0245314_137866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	692	Open in IMG/M
3300029873\|Ga0245321_101453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	22992	Open in IMG/M
3300029875\|Ga0245324_114477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1576	Open in IMG/M
3300029875\|Ga0245324_140627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	588	Open in IMG/M
3300029885\|Ga0245329_101706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	15998	Open in IMG/M
3300029887\|Ga0245331_1006758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	4064	Open in IMG/M
7000000036\|SRS049164_WUGC_scaffold_82777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1328	Open in IMG/M
7000000040\|SRS043411_WUGC_scaffold_43621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	786	Open in IMG/M
7000000232\|SRS015578_WUGC_scaffold_28703	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
7000000271\|SRS053335_LANL_scaffold_23120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	962	Open in IMG/M
7000000334\|C2310778	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
7000000417\|SRS011239_Baylor_scaffold_15548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1425	Open in IMG/M
7000000464\|C1430060	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
7000000646\|SRS015960_WUGC_scaffold_8674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1568	Open in IMG/M
7000000659\|C5419328	Not Available	533	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Human	Host-Associated → Human	93.22%
Mammals	Host-Associated → Mammals	6.78%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Human → Digestive System	93.22%
Digestive System	Host-Associated → Mammals → Digestive System	6.78%

Habitat	Taxonomy	Distribution
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	89.83%
Large Intestine	Host-Associated → Mammals → Digestive System → Large Intestine	5.93%
Unclassified	Host-Associated → Human → Digestive System → Unclassified	2.54%
Oral Cavity	Host-Associated → Human → Digestive System → Oral Cavity	0.85%
Foregut	Host-Associated → Mammals → Digestive System → Foregut	0.85%

Habitat	Taxonomy	Distribution
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	89.83%
Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal	5.08%
Unclassified	Host-Associated → Human → Digestive System → Unclassified → Unclassified	2.54%
Supragingival Plaque	Host-Associated → Human → Digestive System → Oral Cavity → Supragingival Plaque	0.85%
Cecum	Host-Associated → Mammals → Digestive System → Large Intestine → Cecum	0.85%
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen	0.85%

Habitat	Taxonomy	Distribution
Human Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal	30.51%
Human	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human	25.42%
Human Feces	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Feces	13.56%
Human Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Host-Associated	9.32%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	9.32%
Human Gut	Host-Associated → Human → Digestive System → Unclassified → Unclassified → Human Gut	2.54%
Human Gut	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Gut	1.69%
Baboon Gut	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Baboon Gut	1.69%
Orangutan Individual Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Orangutan Individual Fecal	1.69%
Human	Host-Associated → Human → Digestive System → Oral Cavity → Supragingival Plaque → Human	0.85%
Primate Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Primate Fecal	0.85%
Eastern Black-And-White Colobus Group Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Eastern Black-And-White Colobus Group Fecal	0.85%
Mouse Cecum	Host-Associated → Mammals → Digestive System → Large Intestine → Cecum → Mouse Cecum	0.85%
Cattle And Sheep Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Cattle And Sheep Rumen	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000359	Human fecal microbial communities from Cork, Ireland - EM204	Host-Associated	Open in IMG/M
3300000360	Human fecal microbial communities from Cork, Ireland - EM205	Host-Associated	Open in IMG/M
3300001525	Chimp virome sample 4	Host-Associated	Open in IMG/M
3300005461	Mouse cecum microbial communities from Vienna, Austria - Inoculum for glucosamine and mucus D2O microcosms	Host-Associated	Open in IMG/M
3300006257	Human stool microbial communities from NIH, USA - visit 2, subject 764224817	Host-Associated	Open in IMG/M
3300007368	Human supragingival plaque microbial communities from NIH, USA - visit 2, subject 158499257 reassembly	Host-Associated	Open in IMG/M
3300007641	Human stool microbial communities from NIH, USA - visit number 3 of subject 159227541 reassembly	Host-Associated	Open in IMG/M
3300007793	Human stool microbial communities from NIH, USA - visit 2, subject 763860675 reassembly	Host-Associated	Open in IMG/M
3300007796	Human stool microbial communities from NIH, USA - visit 1, subject 764143897 reassembly	Host-Associated	Open in IMG/M
3300007804	Human stool microbial communities from NIH, USA - visit 2, subject 159814214 reassembly	Host-Associated	Open in IMG/M
3300007921	Human stool microbial communities from NIH, USA - visit 1, subject 160704339 reassembly	Host-Associated	Open in IMG/M
3300008077	Human stool microbial communities from NIH, USA - visit 1, subject 763860675 reassembly	Host-Associated	Open in IMG/M
3300008079	Human stool microbial communities from NIH, USA - visit 1, subject 160582958 reassembly	Host-Associated	Open in IMG/M
3300008096	Human stool microbial communities from NIH, USA - visit 1, subject 765701615 reassembly	Host-Associated	Open in IMG/M
3300008103	Human stool microbial communities from NIH, USA - visit 2, subject 764892411 reassembly	Host-Associated	Open in IMG/M
3300008268	Human stool microbial communities from NIH, USA - visit 1, subject 158499257 reassembly	Host-Associated	Open in IMG/M
3300008272	Human stool microbial communities from NIH, USA - visit 1, subject 158337416 reassembly	Host-Associated	Open in IMG/M
3300008360	Human stool microbial communities from NIH, USA - visit 1, subject 764224817 reassembly	Host-Associated	Open in IMG/M
3300008520	Human stool microbial communities from NIH, USA - visit 1, subject 764487809 reassembly	Host-Associated	Open in IMG/M
3300008523	Human stool microbial communities from NIH, USA - visit 2, subject 763597684 reassembly	Host-Associated	Open in IMG/M
3300008622	Human stool microbial communities from NIH, USA - visit 1, subject 765640925 reassembly	Host-Associated	Open in IMG/M
3300008640	Human stool microbial communities from NIH, USA - visit 2, subject 763901136 reassembly	Host-Associated	Open in IMG/M
3300008725	Human stool microbial communities from NIH, USA - visit 1, subject 763678604 reassembly	Host-Associated	Open in IMG/M
3300008728	Human stool microbial communities from NIH, USA - visit 2, subject 763840445 reassembly	Host-Associated	Open in IMG/M
3300010262	Eastern black-and-white colobus group fecal microbial communities from Wisconsin, USA - Cm1105 metagenome	Host-Associated	Open in IMG/M
3300010266	Orangutan individual fecal microbial communities from fecal samples from Wisconsin, USA - O1111 metagenome	Host-Associated	Open in IMG/M
3300013382	Baboon gut microbial communities from fecal samples in Kenya - F09	Host-Associated	Open in IMG/M
3300013940	Human gut microbial communities from patients with symptomatic atherosclerosis - Chalmers University of Technology - 252	Host-Associated	Open in IMG/M
3300014028	Human gut microbial communities from patients with symptomatic atherosclerosis - Chalmers University of Technology - 32	Host-Associated	Open in IMG/M
3300014039	Baboon gut microbial communities from fecal samples in Kenya - M06	Host-Associated	Open in IMG/M
3300014538	Human fecal microbial communities from obese patients in Germany - AS60_6	Host-Associated	Open in IMG/M
3300014565	Human fecal microbial communities from infant at 12 months in Denmark - 82_12M	Host-Associated	Open in IMG/M
3300014744	Human fecal microbial communities from obese patients in Germany - AS50_12	Host-Associated	Open in IMG/M
3300014767	Human fecal microbial communities from ulcerative colitis therapy, University of Washington - UWIBD01P788T1	Host-Associated	Open in IMG/M
3300014799	Human fecal microbial communities from obese patients in Germany - AS45_0	Host-Associated	Open in IMG/M
3300014939	Human fecal microbial communities from obese patients in Germany - AS66_6	Host-Associated	Open in IMG/M
3300014940	Human fecal microbial communities from infant at 12 months in Denmark - 626_12M	Host-Associated	Open in IMG/M
3300014954	Human fecal microbial communities from infant at 12 months in Denmark - 615_12M	Host-Associated	Open in IMG/M
3300014963	Human fecal microbial communities from elderly subjects during probiotic consumption in Boston, USA - meta_42827d56	Host-Associated	Open in IMG/M
3300021400	Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assembly	Host-Associated	Open in IMG/M
3300023491	Human gut microbial communities from healthy child feces in Northridge, California, USA - CDI_28A	Host-Associated	Open in IMG/M
3300023538	Human gut microbial communities from healthy child feces in Northridge, California, USA - CDI_148A	Host-Associated	Open in IMG/M
3300029024	Human fecal microbial communities from mother in Denmark - 45_M	Host-Associated	Open in IMG/M
3300029032	Human fecal microbial communities from mother in Denmark - 532_M	Host-Associated	Open in IMG/M
3300029042	Human fecal microbial communities from mother in Denmark - 39_M	Host-Associated	Open in IMG/M
3300029043	Human fecal microbial communities from mother in Denmark - 26_M	Host-Associated	Open in IMG/M
3300029050	Human fecal microbial communities from mother in Denmark - 276_M	Host-Associated	Open in IMG/M
3300029057	Human fecal microbial communities from mother in Denmark - 383_M	Host-Associated	Open in IMG/M
3300029092	Human fecal microbial communities from mother in Denmark - 10_M	Host-Associated	Open in IMG/M
3300029106	Human fecal microbial communities from mother in Denmark - 172_M	Host-Associated	Open in IMG/M
3300029113	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI021310-108	Host-Associated	Open in IMG/M
3300029119	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI021211-26	Host-Associated	Open in IMG/M
3300029120	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI021209-24	Host-Associated	Open in IMG/M
3300029122	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI019857-129	Host-Associated	Open in IMG/M
3300029131	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI019848-93	Host-Associated	Open in IMG/M
3300029215	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI021239-113	Host-Associated	Open in IMG/M
3300029220	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI011710-39	Host-Associated	Open in IMG/M
3300029250	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI021232-90	Host-Associated	Open in IMG/M
3300029254	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI011697-35	Host-Associated	Open in IMG/M
3300029313	Human feces microbial communities from a patient in hospital, Baltimore, Maryland, USA - 008_6_10_stool_1	Host-Associated	Open in IMG/M
3300029335	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 037_10_31_stool_1	Host-Associated	Open in IMG/M
3300029339	Human feces microbial communities from a patient in hospital, Baltimore, Maryland, USA - 015_6_2_stool_1	Host-Associated	Open in IMG/M
3300029343	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 025_10_26_stool_1	Host-Associated	Open in IMG/M
3300029358	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 046_3_12_stool_2	Host-Associated	Open in IMG/M
3300029359	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 048_3_11_stool_2	Host-Associated	Open in IMG/M
3300029364	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 074_4_26_stool_1	Host-Associated	Open in IMG/M
3300029365	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 064_3_10_stool_1	Host-Associated	Open in IMG/M
3300029379	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 075_5_1_stool_2	Host-Associated	Open in IMG/M
3300029381	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 075_4_29_stool_2	Host-Associated	Open in IMG/M
3300029388	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 096_4_29_stool_2	Host-Associated	Open in IMG/M
3300029445	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 027_10_27_stool_1	Host-Associated	Open in IMG/M
3300029474	Human fecal microbial communities from Shanghai Jiao Tong University, China - RSZAXPI001893-50	Host-Associated	Open in IMG/M
3300029478	Human fecal microbial communities from Shanghai Jiao Tong University, China - RSZAXPI001912-102	Host-Associated	Open in IMG/M
3300029503	Human fecal microbial communities from Shanghai Jiao Tong University, China - RSZAXPI003272-105	Host-Associated	Open in IMG/M
3300029536	Human fecal microbial communities from Shanghai, China - P032V6	Host-Associated	Open in IMG/M
3300029551	Human fecal microbial communities from Shanghai, China - P096V1	Host-Associated	Open in IMG/M
3300029555	Human fecal microbial communities from Shanghai, China - P118V1	Host-Associated	Open in IMG/M
3300029575	Human fecal microbial communities from Shanghai, China - P023V1	Host-Associated	Open in IMG/M
3300029588	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35578	Host-Associated	Open in IMG/M
3300029589	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35549	Host-Associated	Open in IMG/M
3300029593	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_36011	Host-Associated	Open in IMG/M
3300029611	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_36440	Host-Associated	Open in IMG/M
3300029622	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35733	Host-Associated	Open in IMG/M
3300029623	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_36049	Host-Associated	Open in IMG/M
3300029656	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_36697	Host-Associated	Open in IMG/M
3300029682	Human feces microbial communities from a patient in hospital, Baltimore, Maryland, USA - 006_6_23_stool_1	Host-Associated	Open in IMG/M
3300029714	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_36525	Host-Associated	Open in IMG/M
3300029716	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37228	Host-Associated	Open in IMG/M
3300029742	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_36390	Host-Associated	Open in IMG/M
3300029746	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37136	Host-Associated	Open in IMG/M
3300029790	Human feces microbial communities from a patient in hospital, Baltimore, Maryland, USA - 015_6_4_stool_1	Host-Associated	Open in IMG/M
3300029794	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 053_3_14_stool_2	Host-Associated	Open in IMG/M
3300029849	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37174	Host-Associated	Open in IMG/M
3300029859	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37336	Host-Associated	Open in IMG/M
3300029871	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37545	Host-Associated	Open in IMG/M
3300029873	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37652	Host-Associated	Open in IMG/M
3300029875	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37829	Host-Associated	Open in IMG/M
3300029885	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35707	Host-Associated	Open in IMG/M
3300029887	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35999	Host-Associated	Open in IMG/M
7000000036	Human stool microbial communities from NIH, USA - visit 2 of subject 765074482 replicate 2	Host-Associated	Open in IMG/M
7000000040	Human stool microbial communities from NIH, USA - visit 2 of subject 763759525	Host-Associated	Open in IMG/M
7000000232	Human stool microbial communities from NIH, USA - visit 1, subject 764285508	Host-Associated	Open in IMG/M
7000000271	Human stool microbial communities from NIH, USA - visit 1, subject 508703490	Host-Associated	Open in IMG/M
7000000334	Human stool microbial communities from NIH, USA - visit 1, subject 764143897	Host-Associated	Open in IMG/M
7000000417	Human stool microbial communities from NIH, USA - visit 1, subject 158742018	Host-Associated	Open in IMG/M
7000000464	Human stool microbial communities from NIH, USA - visit number 3 of subject 159753524	Host-Associated	Open in IMG/M
7000000646	Human stool microbial communities from NIH, USA - visit 1, subject 764325968	Host-Associated	Open in IMG/M
7000000659	Human stool microbial communities from NIH, USA - visit 2, subject 764002286	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
EM204_10151977	3300000359	Human Fecal	VTTAGGSITISVKNVFTAASRVSGRVWSLVRITVPNDLKFVKIRVEKPQNNSLYPYFQREPL*
EM205_10714761	3300000360	Human Fecal	SVKNVFMAASRVSRRVWSLVRITIPNDLKSVRIGVEKPQNNSLYPYF*
chfec4_100126297	3300001525	Primate Fecal	VRTAGGSITTPAGNAPTAASRVSGRAWWLARITAPNGLKSVKIRVGKPQNNPLYPHFQREPL*
Ga0073906_11696851	3300005461	Mouse Cecum	ASRVSGRVWSLVRITVPNDLKSVRIRVEKPQNNSLYPYFQREPL*
Ga0099346_10024446	3300006257	Human	VRTAGGSITISAKNVFTIASRVSGRVWSLVRITVPNDLKFVRIRVEKPQNNSLYSYFQREPL*
Ga0104977_10271273	3300007368	Human	DGSITTSAVSAPAAASRVSGRVRSLVRITVPNDLKSVKIRVEKPQNNSLYPYFQREPL*
Ga0105527_1139941	3300007641	Human	SITISVKNVFMAASRVSGRVWSLVRITIPNDLKFVKIRVEKPQNNSLYPHFQREPL*
Ga0105888_1060736	3300007793	Human	GWNGRSSWARTAGGSITISAKNVFTVASKVSGRVWSLVRITIPNDLKSVKIRVEKPQNNSLYPYF*
Ga0105889_1063177	3300007796	Human	AGGSITISVKNVFTAASRVSGRVWSLVRITVPNDLKFVGIRVEKPQNNSLYSYFQREPL*
Ga0105889_1083414	3300007796	Human	AGGSITISVKNVFTAASRVSGRVWSLARITVPNGLKSVRIRGRKTQNNSLYSYFQREPL*
Ga0105665_1228691	3300007804	Human	VTTAGGSITISVKNVFTAASRVSGRVWSLVRITVPNDLKFVRIRVEKPQNNSLY
Ga0111562_1421651	3300007921	Human	SSWARTAGGSITISAKNVFMAASRVSGRVWSLVRITIPNGLKYVKIGVEKPQNNSLYPYFQREPL*
Ga0105964_10049898	3300008077	Human	SVKNVFTAASRVSGRVWSLVRITVPNDLKFVRIRVEKTQNNSLYPYFQREPL*
Ga0105956_1063094	3300008079	Human	GSITISVKNVFMAASRVSGRVWSLVRITIPNDLKSVKIRVEKPQNNSLCPYFQREPL*
Ga0114155_10573711	3300008096	Human	VRTAGGSITISVKNVFTAASRVSGRVWSLVRITVPNDLKFVRIRVEKPQNNSLYPYFQRELL*
Ga0114180_1024236	3300008103	Human	MAGGSITISAKNVFTAASRVSGRVWSLVRITVPNDLKSVRIRGRKTQNNSLYPYFQREPL
Ga0114180_1029101	3300008103	Human	SWARMAGGSITISAKNVFTVASRVSGYVWSLARITVPNGLKSVRIRGRKTQNNSLYSYFQREPL*
Ga0111491_10060311	3300008268	Human	SGGWNGRSSWARTAGGSITISVKNVFTAASRVSGYVWSLVRITVPNGLKSVRIRGRKTQNNSLYSYFQREPI*
Ga0111092_10348231	3300008272	Human	KNVFTAASRVSGRVWSLVRITVPNDLKFVRIRVEKPQNNSLYPYFQREPL*
Ga0114875_10515531	3300008360	Human	VRTAGGSITISVKNVFTAASRVSGRVWLLVRITVPNDLKFVRIRVEKPQNNSLY
Ga0111044_1114553	3300008520	Human	SVKNVFTAASRVSGRVWSLVRITVPNDLKFVRIRVEKPQNNSLYPYFQREPL*
Ga0115231_10388422	3300008523	Human	IVQKAKARSAGTADGSITISAKNVFTAASRVSGRVWSLARITVPNGLKSVRIRGRKTQNNPLYPYFQR*
Ga0111363_1143971	3300008622	Human	GGSITISVKNVLTAASRVSGRVWLLVRITVPNDLKFVRIRVEKPQNNSLYPYFQREPL*
Ga0111422_1063121	3300008640	Human	ARNGGWNGRSSWVTTAGGSITISVKNVFTAASRVSGRVWSLVRITVPNGLKSVRIWVEKTQNNSLYPYFQREPL*
Ga0115670_10168023	3300008725	Human	GSITIFVKNVFTAASRVLGRVWSLVRITIPNGLKYVKIGVEKPQNNSLYPYFQREPL*
Ga0115675_1155894	3300008728	Human	ITIFVKNVFTAASRVLGRVWSLVRITVPNDLKFVRIRVEKPQNNSLYPYFQREPL*
Ga0129317_100024357	3300010262	Eastern Black-And-White Colobus Group Fecal	VRTAGGSITISVKDVFTAASRVSGHVWSLVRITVPNGLKSVKIGVKKPQNNFLYPYFQREPL*
Ga0129314_10181184	3300010266	Orangutan Individual Fecal	GSITISVKNVFTAASRVSGRVWSLVRITVPNDLKSVRIRGRKTQNNSLYPYFQREPL*
Ga0129314_10268812	3300010266	Orangutan Individual Fecal	VRTAGGSITISVKNVFTAASRVSGRVWSLVRITVPNDLKFVKIRVEKPQNNSLYPYFQREPL*
Ga0116618_1023552	3300013382	Baboon Gut	VRTAGGSITISAKNVFTAASRVSGHVWSLVRITIPNGLKSVKIRVEKPQNNFLYPYFQREPL*
Ga0117807_10262442	3300013940	Human Gut	AGGSITISVKNVFTVASRVSGYVWSLVRITVPNGLKSVRIRGRKTQNNSLYSYFQREPL*
Ga0117810_10254184	3300014028	Human Gut	SSWVRTSGGSITISVKNVFTAASRVSGRVWSLVRITVPNDLKFVKIRVEKPQNNSLYPYFQREPL*
Ga0117810_10713731	3300014028	Human Gut	TISVKNVFTAASRVSGRVWSLVRITIPNDLKFVKIGVEKPQNNFLYPYFQR*
Ga0116646_10218464	3300014039	Baboon Gut	FTAASRVSGRVWSLVRITVPNDLKSVRIRVEKPQNNSLYPYFQREPL*
Ga0134452_1131431	3300014538	Human Fecal	SRVSGRVWSLVRITVPNGLKSVKIGVEKPQNNTLYSYFQRELL*
Ga0169881_1335962	3300014565	Human Host-Associated	VTTAGGSITISVKNVFTAASRVSGRVWSLVRITVPNGLKFVKIRVEKPQNNSLYPYFQREPL*
Ga0134393_10023228	3300014744	Human Fecal	VRTAGGSITISAKNVFTAASRVSGRVWSLVRITVPNDLKSVRIRVEKPQNNSLYPYFQREPL*
Ga0134506_1276931	3300014767	Human Fecal	FTAASRVSGRVWSLVRITVPNGLKSVRIWVEKTQNNSLYPYFQREPL*
Ga0134377_10133681	3300014799	Human Fecal	SITMSAKNVFTAASRVSGRVWSLVRITVPNDLKFVRIRVEKPQNNSLYPYFQREPL*
Ga0134458_1194281	3300014939	Human Fecal	SWARTAGGSITISVKNVFTAASRVSGRVWSLVRITIPNGLKYVKIRGRKTQNNSLYSYFQREPL*
Ga0134458_1209081	3300014939	Human Fecal	VKNVFTAASRVSGRVWSLVRITVPNGLKSVRIRGRKTQNNSLYPYFQKEPL*
Ga0169849_10011714	3300014940	Human Host-Associated	VTTAGGSITISAKNVFTAASRVSGYVWSLVRITVPNGLKSVRIRGRKTQNNFLYPYFQREPL*
Ga0169837_1067965	3300014954	Human Host-Associated	SCWARTAGGSRTISAKNVFTVASRVSGYVWSLVRITVPNGLKSVKIGVEKPQNNFLYPYFQREPL*
Ga0134523_10212151	3300014963	Human Fecal	AKNVFTAASRVSGRVWSLVRITVPNGLKSVKIRVEKPQNNFLYPYFQREPL*
Ga0224422_104818122	3300021400	Cattle And Sheep Rumen	SSIAIAIKKWFTAASRVSVRAWSLVRITVPNALKSVKIGVEEPQNSSLYPYFQREPL
Ga0257045_1037969	3300023491	Human Gut	ARTAGGSITISAKNVFTAASRVSGRVWSLVRITIPNALKSVKIGVEKPQNNSLYSYFQRETL
Ga0257033_122137	3300023538	Human Gut	VRTAGGSITISAKNVFMAASRVSGRVWSLVRITIPNDLKSVKIRVEKPQNNFLYPYFQREPL
Ga0169709_1174661	3300029024	Human Host-Associated	VFTAASRVSGRVWSLARITVPNGLKSVRIRGRKTQNNSLYSYFQREPL
Ga0169753_1097003	3300029032	Human Host-Associated	ISVKNVFTAASRVSGRVWSLARITVPNGLKSVRIRGRKTQNNSLYSYFQREPL
Ga0169701_1230071	3300029042	Human Host-Associated	ASRVSGRVWSLVRITVPNGLKYVKIGVEKPQNNSLYPYFQREPL
Ga0169613_1305952	3300029043	Human Host-Associated	KNVFMAASRVSGRVWLLVRITIPNGLKSVKIRVEKPQNNSLYPYFQREPL
Ga0169629_1379552	3300029050	Human Host-Associated	TISVKNVFTAASRVSGRVWSLVRITVPNDLKFVRIRVEKTQNNSLYPYFQREPL
Ga0169682_1195822	3300029057	Human Host-Associated	KNVFTAASRVSGRVWSLVRITVPNGLKYVKIGVEKPQNNSLYPYFQREPL
Ga0169182_1164833	3300029092	Human Host-Associated	TAGGSITISVKNVFTAASRVSGRVWSLVRITIPNGLKSVKIRGRKTQNNSLYSYFQREPL
Ga0169216_1015851	3300029106	Human Host-Associated	TAGGSITISVKNVFTAASRVSGRVWSLARITVPNGLKSVRIRGRKTQNNSLYSYFQREPL
Ga0168853_1022291	3300029113	Host-Associated	EARSGGWNGRSSWARTAGGSITIFVKNVFTAASRVLGRVWSLVRITIPNGLKYVKIGVEKPQNNSLYPYFQREPL
Ga0168816_1072041	3300029119	Host-Associated	AGGSITISVKNVFTAASRVSGRVWSLARITVPNGLKSVKIRVEKPQNNSLYSYFQREPL
Ga0168814_1068864	3300029120	Host-Associated	SGGWNGRSSWVRTAGGSITIFVKNVFTAASRVLGRVWSLVRITIPNGLKYVKIGVEKPQNNSLYPYFQREPL
Ga0168799_10351701	3300029122	Host-Associated	VKNVFTAASRVSGRVWSLVRITVPNGLKSVRIWVEKTQNNSLYPYFQR
Ga0168790_10022963	3300029131	Host-Associated	VTTAGGSITISVKNVFTAASRVSGRVWSLVRITVPNDLKFVKIRVEKPQNNSLYPYFQREPL
Ga0167476_1020631	3300029215	Host-Associated	ITIFVKNVFTAASRVLGRVWSLVRITIPNGLKYVKIGVEKPQNNSLYPYFQREPL
Ga0168707_1060916	3300029220	Host-Associated	VTTAGGSITISVKNVFTAASRVSGRVWSLVRITVPNDLKFVRIRVEKPQNNSLYPYFQREPL
Ga0167474_10150631	3300029250	Host-Associated	WNGRSSWVRTVGVSITISAKNVFMAASRVSGRVWSLVRITIPNGLKYVKIGVEKPQNNFLHPCFQRESL
Ga0167474_10159121	3300029250	Host-Associated	FTAASRVSGRVWSLVRITIPNALKSVKIGVEKPQNNSLYSYFQRETL
Ga0167474_10198781	3300029250	Host-Associated	VKAIVQKAKARAAGTADGSITISAKNVFTAASRVSGRVWSLARITVPNGLKSVRIRGRKTQNNPLYPYFQR
Ga0168700_10600331	3300029254	Host-Associated	ITISAKNVFTVASKVSGRVWSLVRITIPNDLKSVKIRVEKPQNNSLYPYF
Ga0242781_10037453	3300029313	Human Feces	VRTAGGSITISAKNVFMAASRVSGRVWSLVRITVPNGLKYVKIRVEKPQNNSLYPYFQREPL
Ga0243762_1071362	3300029335	Human Feces	VRTAGGSITISAKNVFTIASRVSGRVWSLVRITVPNDLKFVRIRVEKPQNNSLYSYFQREPL
Ga0242823_10074601	3300029339	Human Feces	GSITISVKNVFTAASRVSERVWPLVHITVPNGLKSVKIRVEKPQNNSLYPYFQREPL
Ga0242823_10214121	3300029339	Human Feces	VRTAGGSITISVKNVFTAASRVSGRVWSLVRITVPNDLKFVRIRV
Ga0243725_10130554	3300029343	Human Feces	TAGGSITISVKNVFTAASRVSGRVWSLARITVPNGLKSVKIRVEKPQNNSLYPYFQREPL
Ga0243818_10003922	3300029358	Human Feces	VRTAGGSITISVKNVFTAASRVSGRVWLLVRITVPNDLKFVRIRVEKPQNNSLYPYFQREPL
Ga0243835_100366411	3300029359	Human Feces	RSGGWNGRSSWARTAGGSITISVKNVFMAASRVSGRVWSLVRITIPNDLKSVKIRVEKPQNNSLYPYFQREPL
Ga0243886_10033391	3300029364	Human Feces	EARNGGWNGRSSWARTAGGSITISVKNVFTAASRVSERVWPLVHITVPNGLKSVKIRVEKPQNNSLYPYFQREPL
Ga0243866_10243291	3300029365	Human Feces	TISAKNVFTAASRVSGRVWSLVRITVPNDLKSVRIRVRKPQNNSLYPHFQGEPL
Ga0243906_10134161	3300029379	Human Feces	VFTVASRVSGYVWSLVRITVPNGLKSVRIRGRKTQNNSLYPYFQREPL
Ga0243902_10084318	3300029381	Human Feces	VRTAGGSITISAKNVFTAASRASGHVWSLVRITVPNGLKYVKIGVEKPQNNSLYPYFQREPL
Ga0243998_10113185	3300029388	Human Feces	VTTAGGSITISVKNVFTAASRVSERVWPLVHITVPNGLKSVKIRVEKPQNNSLYPYFQREPL
Ga0243741_10527771	3300029445	Human Feces	ITISVKNVFTAASRVSGRVWSLVRITIPNGLKYVKIRVEKPQNNSLYPYFQREPL
Ga0244136_1122293	3300029474	Human Fecal	VRTAGGSITISVKNVFTAASRVSGRVWSLVRITIPNGLKYVKIGVEKPQNNSLYPYFQREPL
Ga0244154_10254012	3300029478	Human Fecal	NGRSSWARTAGGSITISVKNVFTAASRVSGRVWSLVRITVPNDLKSVRIRGRKTQNNSLYSYFQREPL
Ga0244781_10301810	3300029503	Human Fecal	GGSIIISAANAPTAASRVSGRVWSLVRITIPNDLKSVKIRVEKPQNNSLYPYFQREPL
Ga0244918_1071885	3300029536	Human Fecal	VRTVGVSITISAKNVFMAASRVSGRVWSLVRITIPNGLKYVKIGVEKPQNNSLYPYFQREPL
Ga0245011_1119061	3300029551	Human Fecal	KNVFTAASRVLGRVWSLVRITIPNGLKYVKIGVEKPQNNSLYPYFQREPL
Ga0245053_1052857	3300029555	Human Fecal	VTTAGGSITISVKNVFTAASRVSGHVWSLVRITVPNDLKFVKIRVEKPQNNSLYPYFQREPL
Ga0244903_10275412	3300029575	Human Fecal	WVTTAGGSITISVKNVFTAASRVSGRVWSLVRITVPNGLKSVRIWVEKTQNNSLYPYFQR
Ga0245111_10127181	3300029588	Human Fecal	GGSITISAKNVFTAASRASGHVWSLVRITVPNGLKYVKIGVEKPQNNSLYPYFQREPL
Ga0245106_1602862	3300029589	Human Fecal	SVKNVFTAASRVSGRVWSLVRITVPNGLKSVRIWVEKTQNNSLYPYFQREPL
Ga0245135_1217692	3300029593	Human Fecal	ITISAKNVFTAASRVSGRVWSLVHITVPDGLKSVKIGVEKPQNNSLYPYFQREPL
Ga0245149_1166621	3300029611	Human Fecal	WNGHFSRVRTAGGSITISAKNVFTAASRVSGRVWSLVRITIPNGLKYVKIGVEKPQNNSLYPYFQREPL
Ga0245124_10153853	3300029622	Human Fecal	VRTAGGSITISVKNVFTAASRVSGRVWSLARITVPNALKFVRIRVKKPQNNSLYSYFQRELL
Ga0245138_10470132	3300029623	Human Fecal	SAKNVFTAASRVSGHVWSFARITVPNGLKYVKIGVEKPQNNSLYPYFQREPL
Ga0245165_10058831	3300029656	Human Fecal	VRTAGGSITAPAENAPTAASRVSGRVWSLVRITVPNDLKFVRIRVEKPQNNSLYPYFQREPL
Ga0242767_1186042	3300029682	Human Feces	MSAKNVFTAASRVSGRVWSLVRITVPNDLKFVRIRVEKPQNNSLYPYFQREPL
Ga0245242_10145741	3300029714	Human Fecal	ADDSITISAKNVFMAASRVSGRVWSLVRITIPNGLKSVKIGVGKPQNNFLYPYFQREPL
Ga0245242_10446661	3300029714	Human Fecal	GSITISVKNVFMAASRVSGRVWSLVRITIPNDLKSVKIRVEKPQNNSLYPYFQREPL
Ga0245260_10655181	3300029716	Human Fecal	AKNVFTAASRVSGRVWSLVRITVPNDLKFVRIRVEKPQNNSLYPYFQREPL
Ga0245239_1018135	3300029742	Human Fecal	MAGGSITISVKNVFTAASRVSGRVWSLVRITIPNDLKSVKIRVEKPQNNSLYPYF
Ga0245173_1357953	3300029746	Human Fecal	AGGSITISVKNVFTAASRVSGRVWSLARITVPNGLKSVRIRGRKTQNNSLYSYFQREPL
Ga0242825_10204831	3300029790	Human Feces	VRTAGGSITISVKNVFTAASRVSGRVWSLVRITVPNDLKFVRIRVEKP
Ga0243854_10244644	3300029794	Human Feces	ITISVKNVFTAASRVSGRVWSLVRITVPNGLKSVKIGVEKPQNNFLYPYFQR
Ga0245286_1159812	3300029849	Human Fecal	CHYGNGRSSWARTADGSITISAKNVFTAASRVSGRVWSLVRITVPNGLKSVKIGVEKPQNNFLYPYFQREPL
Ga0245304_10282113	3300029859	Human Fecal	VRTAGGSITISAKNVFTAASRVSGRVWSLVRITVPNDLKFVRIRVEKPQNNSLYPYFQREPL
Ga0245314_1378662	3300029871	Human Fecal	VRTAGGSITISAKNVFTAASRVSGRVWSLVRITVPNDLKSVRIRGRKTQNNSLYSYFQREPL
Ga0245321_1014531	3300029873	Human Fecal	SITIFVKNVFTAASRVLGRVWSLVRITIPNGLKYVKIGVEKPQNNSLYPYFQREPL
Ga0245324_1144773	3300029875	Human Fecal	FTAASRVLGRVWSLVRITIPNGLKYVKIGVEKPQNNSLYPYFQREPL
Ga0245324_1406271	3300029875	Human Fecal	ITISVKNVFTAASRVSERVWSLVHITVPNGLKFVKIRVEKPQNNSLYPYFQREPL
Ga0245329_10170626	3300029885	Human Fecal	ISVKNVFTAASRVSGRVWSLVRITVPNDLKSVRIRGRKTQNKPLYPYFQREPL
Ga0245331_10067586	3300029887	Human Fecal	VRTADGSITISAKNVFTAASRVSGRVWSLVRITVPNDLKYVRIRVEKPQNNSLYPYFQREPL
SRS049164_WUGC_scaffold_82777__gene_142614	7000000036	Human	GGWNGRSSWARTAGGSITIFVKNVFTAASRVLGCVWSLVRITIPNGLKYVKIGVEKPQNNSLYPYFQREPL
SRS043411_WUGC_scaffold_43621__gene_88149	7000000040	Human	ARTAGGSITISVKNVFMAASRVSGRVWSLVRITIPNDLKFVKIRVEKPQNNSLYPHFQREPL
SRS015578_WUGC_scaffold_28703__gene_53839	7000000232	Human	VFTAASRVLGRVWSLVRITVPNDLKFVRIRVEKPQNNSLYPYFQREPL
SRS053335_LANL_scaffold_23120__gene_51178	7000000271	Human	TAASRVSGRVWSLVRITVPNDLKFVKIRVEKPQNNSLYPYFQREPL
C2310778__gene_198653	7000000334	Human	WNGRSSWVRTAGGSITISVKNVFTAASRVSGRVWSLVRITVPNDLKFVGIRVEKPQNNSLYSYFQREPL
SRS011239_Baylor_scaffold_15548__gene_36919	7000000417	Human	TAASRVSGRVWLLVRITVPNDLKFVRIRVEKPQNNSLYPYFQRESL
C1430060__gene_146036	7000000464	Human	GSIIISAANAPTAASRVSGRVWSLVRITIPNDLKSVKIRVEKPQNNSLYPYFQREPL
SRS015960_WUGC_scaffold_8674__gene_20279	7000000646	Human	IASRVSGRVWSLVRITVPNDLKFVRIRVEKPQNNSLYSYFQREPL
C5419328__gene_128613	7000000659	Human	VRTAGGSITISVKNVFTAASRVSGRVWSLVRITVPNDLKFVRIRVEKPQNNSLYPYFQRESL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076190

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences