NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Browse Microbiome Datasets

Browse Microbiome Datasets





Fetching Data... Please Wait







Family ID(s):




Sample Type: 

Sequencing Center:

Select Location from the list:
or search by text:


Show only published samples


Click on the red pointer ( ) to expand or collapse. Select one or more taxa by ticking the checkboxes next to their names.
Expand    Collapse
  • All Organisms
    • Viruses
      • Fuselloviridae
        • Betafusellovirus
      • Predicted Viral
      • unclassified bacterial viruses
      • unclassified viruses
        • unclassified DNA viruses
          • unclassified ssDNA viruses
            • Circovirus-like genome RW-C
          • unclassified dsDNA viruses
            • Hyperthermophilic Archaeal Virus 1
            • Pandoravirus
              • Pandoravirus salinus
              • Pandoravirus inopinatum
          • unclassified archaeal dsDNA viruses
            • Haloviruses
              • Halovirus HCTV-1
              • Halovirus HGTV-1
              • Halovirus HHTV-2
            • Sulfolobales virus YNP1
      • Bicaudaviridae
        • unclassified Bicaudaviridae
          • Sulfolobus virus STSV1
          • Sulfolobus monocaudavirus SMV4
      • unclassified virophages
      • Riboviria
        • unclassified Riboviria
          • ssRNA viruses
          • unclassified RNA viruses ShiM-2016
            • Hubei narna-like virus 10
            • Wenling narna-like virus 4
            • Wenzhou narna-like virus 6
        • Orthornavirae
          • Negarnaviricota
            • Haploviricotina
              • Monjiviricetes
                • Mononegavirales
          • Kitrinoviricota
            • Alsuviricetes
              • Tymovirales
                • unclassified Tymovirales
            • Flasuviricetes
              • Amarillovirales
                • Flaviviridae
          • Lenarviricota
            • Allassoviricetes
              • Levivirales
                • Leviviridae
            • Amabiliviricetes
              • Wolframvirales
                • Narnaviridae
        • Pararnavirae
          • Artverviricota
            • Revtraviricetes
              • Ortervirales
                • Retroviridae
                • Caulimoviridae
      • Duplodnaviria
        • Heunggongvirae
          • Peploviricota
            • Herviviricetes
              • Herpesvirales
                • Herpesviridae
          • Uroviricota
            • Caudoviricetes
              • Caudovirales
                • Myoviridae
                • Siphoviridae
                • Podoviridae
                • Ackermannviridae
                • Autographiviridae
                • Demerecviridae
                • Schitoviridae
                • Zobellviridae
      • Monodnaviria
        • Shotokuvirae
          • Cossaviricota
            • Papovaviricetes
              • Zurhausenvirales
                • Papillomaviridae
      • Varidnaviria
        • Bamfordvirae
          • Nucleocytoviricota
            • Megaviricetes
              • Algavirales
                • Phycodnaviridae
              • Imitervirales
                • Mimiviridae
              • Pimascovirales
                • Iridoviridae
                • Marseilleviridae
            • Pokkesviricetes
              • Chitovirales
                • Poxviridae
          • Preplasmiviricota
            • Maveriviricetes
              • Priklausovirales
                • Lavidaviridae
            • Tectiliviricetes
              • Kalamavirales
                • Tectiviridae
              • Rowavirales
                • Adenoviridae
      • Adnaviria
        • Zilligvirae
          • Taleaviricota
            • Tokiviricetes
              • Ligamenvirales
                • Lipothrixviridae
                • Rudiviridae
      • Naldaviricetes
        • Lefavirales
          • Baculoviridae
            • Alphabaculovirus
              • Spodoptera exigua multiple nucleopolyhedrovirus
              • Hyphantria cunea nucleopolyhedrovirus
              • Adoxophyes honmai nucleopolyhedrovirus
              • Agrotis segetum nucleopolyhedrovirus A
    • Bacteria
      • Proteobacteria
        • Gammaproteobacteria
          • unclassified Gammaproteobacteria
            • gamma proteobacterium HdN1
            • Bathymodiolus platifrons methanotrophic gill symbiont
            • endosymbiont of Bathymodiolus sp.
            • Olavius algarvensis Gamma 3 endosymbiont
            • gamma proteobacterium HTCC5015
            • gamma proteobacterium NOR5-3
            • gamma proteobacterium HIMB30
            • gamma proteobacterium SCGC AAA076-D02
            • gamma proteobacterium SCGC AAA076-D13
            • gamma proteobacterium SCGC AAA076-E13
            • gamma proteobacterium SCGC AAA076-F14
            • gamma proteobacterium SCGC AAA076-P09
            • gamma proteobacterium SCGC AAA076-P13
            • gamma proteobacterium SCGC AAA160-D02
            • gamma proteobacterium SCGC AAA168-P09
            • gamma proteobacterium WG36
            • gamma proteobacterium L18
            • Gammaproteobacteria bacterium MFB021
            • Gammaproteobacteria bacterium
          • Thiotrichales
            • Francisellaceae
              • Francisella
                • Francisella tularensis
                • Francisella persica
                • Francisella philomiragia
                • Francisella salina
                • Francisella hispaniensis
                • Francisella frigiditurris
                • unclassified Francisella
              • Allofrancisella
                • Allofrancisella guangzhouensis
            • Piscirickettsiaceae
              • Thiomicrospira
                • Thiomicrospira pelophila
                • Thiomicrospira aerophila
                • Thiomicrospira cyclica
                • Thiomicrospira microaerophila
              • Piscirickettsia
                • Piscirickettsia salmonis
              • Hydrogenovibrio
                • Hydrogenovibrio marinus
                • Hydrogenovibrio crunogenus
                • Hydrogenovibrio kuenenii
                • Hydrogenovibrio halophilus
                • unclassified Hydrogenovibrio
              • Cycloclasticus
                • Cycloclasticus pugetii
                • unclassified Cycloclasticus
              • Methylophaga
                • Methylophaga sulfidovorans
                • Methylophaga aminisulfidivorans
                • Methylophaga thiooxydans
                • Methylophaga nitratireducenticrescens
                • Methylophaga frappieri
                • Methylophaga lonarensis
              • Thiomicrorhabdus
                • Thiomicrorhabdus chilensis
                • Thiomicrorhabdus arctica
                • unclassified Thiomicrorhabdus
            • Thiotrichaceae
              • Beggiatoa
                • Beggiatoa alba
                • Beggiatoa leptomitoformis
                • unclassified Beggiatoa
              • Thiothrix
                • Thiothrix nivea
                • Thiothrix eikelboomii
                • Thiothrix lacustris
                • Thiothrix caldifontis
              • Thioploca
                • Thioploca ingrica
              • Achromatium
                • environmental samples
                • unclassified Achromatium
              • Leucothrix
                • Leucothrix mucor
              • Thiomargarita
            • Fastidiosibacteraceae
              • Fangia
                • Fangia hongkongensis
            • Thiolinaceae
              • Thiolinea
                • Thiolinea disciformis
            • Thiofilaceae
              • Thiofilum
                • Thiofilum flexile
          • Pseudomonadales
            • Pseudomonadaceae
              • Pseudomonas
                • Pseudomonas agarici
                • Pseudomonas knackmussii
                • Pseudomonas alcaliphila
                • Pseudomonas frederiksbergensis
                • Pseudomonas gingeri
                • Pseudomonas psychrophila
                • Pseudomonas aeruginosa group
                • Pseudomonas chlororaphis group
                • Pseudomonas fluorescens group
                • Pseudomonas putida group
                • Pseudomonas stutzeri group
                • Pseudomonas syringae group
                • Pseudomonas parafulva
                • Pseudomonas cremoricolorata
                • Pseudomonas thermotolerans
                • unclassified Pseudomonas
                • Pseudomonas umsongensis
                • Pseudomonas batumici
                • Pseudomonas alkylphenolica
                • Pseudomonas psychrotolerans
                • Pseudomonas japonica
                • Pseudomonas azotifigens
                • Pseudomonas entomophila
                • Pseudomonas vranovensis
                • Pseudomonas extremaustralis
                • Pseudomonas pohangensis
                • Pseudomonas reinekei
                • Pseudomonas taiwanensis
                • Pseudomonas massiliensis
                • Pseudomonas toyotomiensis
                • Pseudomonas benzenivorans
                • Pseudomonas flexibilis
                • Pseudomonas brassicacearum
                • Pseudomonas sagittaria
                • Pseudomonas donghuensis
                • Pseudomonas aestus
                • Pseudomonas yangmingensis
              • Azotobacter group
                • Azotobacter
              • Halopseudomonas
                • Halopseudomonas pelagia
                • Halopseudomonas bauzanensis
                • Halopseudomonas formosensis
              • Denitrificimonas
                • Denitrificimonas caeni
            • Perlucidibacaceae
              • Perlucidibaca
                • Perlucidibaca piscinae
            • Marinobacteraceae
              • Marinobacter
                • Marinobacter nauticus
                • unclassified Marinobacter
                • Marinobacter lipolyticus
                • Marinobacter excellens
                • Marinobacter algicola
                • Marinobacter daepoensis
                • Marinobacter gudaonensis
                • Marinobacter pelagius
                • Marinobacter segnicrescens
                • Marinobacter santoriniensis
                • Marinobacter daqiaonensis
                • Marinobacter adhaerens
                • Marinobacter nitratireducens
                • Marinobacter manganoxydans
                • Marinobacter nanhaiticus
              • Mangrovitalea
                • Mangrovitalea sediminis
          • Enterobacterales
            • Enterobacteriaceae
              • Citrobacter
                • Citrobacter koseri
                • Citrobacter amalonaticus
                • Citrobacter farmeri
                • Citrobacter rodentium
                • Citrobacter freundii complex
                • Citrobacter pasteurii
                • unclassified Citrobacter
              • Enterobacter
                • Enterobacter cloacae complex
                • Enterobacter mori
                • Enterobacter bugandensis
                • unclassified Enterobacter
              • Escherichia
                • Escherichia coli
                • Escherichia fergusonii
                • Escherichia albertii
                • unclassified Escherichia
              • Kluyvera
                • Kluyvera ascorbata
              • Salmonella
                • Salmonella enterica
                • Salmonella bongori
              • Shigella
                • Shigella flexneri
                • Shigella sonnei
              • Plesiomonas
                • Plesiomonas shigelloides
              • unclassified Enterobacteriaceae
                • Enterobacteriaceae bacterium 9_2_54FAA
                • Enterobacteriaceae bacterium strain FGI 57
                • Enterobacteriaceae bacterium B14
                • Enterobacteriaceae bacterium LSJC7
              • Buttiauxella
                • Buttiauxella agrestis
              • Leclercia
                • Leclercia adecarboxylata
              • Cedecea
                • Cedecea davisae
                • Cedecea neteri
              • Trabulsiella
                • Trabulsiella guamensis
              • Yokenella
                • Yokenella regensburgei
              • Enterobacteriaceae incertae sedis
                • ant, tsetse, mealybug, aphid, etc. endosymbionts
              • Cronobacter
                • Cronobacter sakazakii
                • Cronobacter dublinensis
                • Cronobacter muytjensii
                • Cronobacter turicensis
                • Cronobacter malonaticus
                • Cronobacter universalis
                • Cronobacter condimenti
              • Kosakonia
                • Kosakonia radicincitans
                • Kosakonia sacchari
              • Shimwellia
                • Shimwellia blattae
              • Franconibacter
                • Franconibacter helveticus
                • Franconibacter pulveris
              • Siccibacter
                • Siccibacter turicensis
                • Siccibacter colletis
              • Atlantibacter
                • Atlantibacter hermannii
              • Metakosakonia
                • Metakosakonia massiliensis
              • Pseudescherichia
                • Pseudescherichia vulneris
              • Klebsiella/Raoultella group
                • Klebsiella
                • Raoultella
            • Thorselliaceae
              • Thorsellia
                • Thorsellia anophelis
            • Erwiniaceae
              • Erwinia
                • Erwinia amylovora
                • Erwinia mallotivora
                • Erwinia pyrifoliae
                • Erwinia toletana
                • Erwinia billingiae
                • Erwinia tasmaniensis
                • unclassified Erwinia
              • Buchnera
                • Buchnera aphidicola
              • Wigglesworthia
                • Wigglesworthia glossinidia
              • Pantoea
                • Pantoea ananatis
                • Pantoea dispersa
                • Pantoea stewartii
                • Pantoea vagans
                • Pantoea agglomerans group
                • unclassified Pantoea
              • Tatumella
                • Tatumella ptyseos
                • Tatumella morbirosei
            • Pectobacteriaceae
              • Brenneria
                • Brenneria salicis
                • unclassified Brenneria
              • Pectobacterium
                • Pectobacterium carotovorum
                • Pectobacterium atrosepticum
                • Pectobacterium wasabiae
                • Pectobacterium brasiliense
                • Pectobacterium parmentieri
              • Dickeya
                • Dickeya chrysanthemi
                • Dickeya dadantii
                • Dickeya dianthicola
                • Dickeya zeae
                • Dickeya poaceiphila
                • Dickeya solani
                • unclassified Dickeya
              • Lonsdalea
                • Lonsdalea quercina
              • Musicola
                • Musicola paradisiaca
            • Yersiniaceae
              • Serratia
                • Serratia liquefaciens
                • Serratia marcescens
                • Serratia odorifera
                • Serratia proteamaculans
                • Serratia fonticola
                • Serratia grimesii
                • Serratia plymuthica
                • Serratia symbiotica
                • unclassified Serratia
              • Yersinia
                • Yersinia enterocolitica
                • Yersinia intermedia
                • Yersinia bercovieri
                • Yersinia kristensenii
                • Yersinia frederiksenii
                • Yersinia mollaretii
                • Yersinia massiliensis
                • Yersinia pseudotuberculosis complex
              • Rahnella
                • Rahnella aquatilis
                • unclassified Rahnella
              • Chania
                • Chania multitudinisentens
            • Hafniaceae
              • Hafnia
                • Hafnia alvei
              • Edwardsiella
                • Edwardsiella tarda
                • Edwardsiella anguillarum
            • Morganellaceae
              • Morganella
                • Morganella morganii
                • unclassified Morganella (in: Bacteria)
              • Proteus
                • Proteus mirabilis
                • Proteus vulgaris
              • Providencia
                • Providencia rettgeri
                • Providencia stuartii
                • Providencia alcalifaciens
                • Providencia sneebia
                • Candidatus Providencia siddallii
              • Xenorhabdus
                • Xenorhabdus nematophila
                • Xenorhabdus bovienii
                • Xenorhabdus szentirmaii
                • unclassified Xenorhabdus
              • Arsenophonus
              • Photorhabdus
                • Photorhabdus luminescens
                • Photorhabdus asymbiotica
                • Photorhabdus temperata
                • Photorhabdus khanii
                • Photorhabdus laumondii
            • Budviciaceae
              • Budvicia
                • Budvicia aquatica
              • Leminorella
                • Leminorella grimontii
              • Pragia
                • Pragia fontium
            • Bruguierivoracaceae
              • Sodalis
                • Sodalis glossinidius
                • Sodalis praecaptivus
          • Gammaproteobacteria incertae sedis
            • sulfur-oxidizing symbionts
              • Solemya velum gill symbiont
              • Codakia orbicularis gill symbiont
              • endosymbiont of Riftia pachyptila
              • Bathymodiolus septemdierum thioautotrophic gill symbiont
              • Candidatus Endoriftia
                • Candidatus Endoriftia persephone
              • Calyptogena okutanii thioautotrophic gill symbiont
              • Candidatus Ruthia
                • Candidatus Ruthia magnifica
              • Candidatus Vesicomyosocius
            • SAR86 cluster
              • SAR86 cluster bacterium SAR86A
              • SAR86 cluster bacterium SAR86B
              • SAR86 cluster bacterium SAR86E
            • Dechloromarinus
              • Dechloromarinus chlorophilus
            • Ignatzschineria
              • Ignatzschineria larvae
            • Alkalimonas
              • Alkalimonas amylolytica
            • Sedimenticola
              • Sedimenticola selenatireducens
            • Thiohalorhabdus
              • Thiohalorhabdus denitrificans
            • Wohlfahrtiimonas
              • Wohlfahrtiimonas chitiniclastica
            • Candidatus Thioglobus
              • Candidatus Thioglobus autotrophicus
            • Gallaecimonas
              • Gallaecimonas xiamenensis
            • Candidatus Competibacteraceae
              • Candidatus Competibacter
                • Candidatus Competibacter denitrificans
              • Plasticicumulans
                • Plasticicumulans lactativorans
              • Candidatus Contendobacter
                • Candidatus Contendobacter odensis
            • Pseudohongiella
              • Pseudohongiella spirulinae
              • Pseudohongiella acticola
              • Pseudohongiella nitratireducens
            • Candidatus Pseudothioglobus
              • Candidatus Pseudothioglobus singularis
          • Legionellales
            • Legionellaceae
              • Legionella
                • Legionella pneumophila
                • Legionella hackeliae
                • Legionella longbeachae
                • Legionella israelensis
                • Legionella jordanis
                • Legionella anisa
                • Legionella birminghamensis
                • Legionella cherrii
                • Legionella sainthelensi
                • Legionella wadsworthii
                • Legionella oakridgensis
                • Legionella moravica
                • Legionella fairfieldensis
                • Legionella geestiana
                • Legionella lansingensis
                • Legionella londiniensis
                • Legionella quinlivanii
                • Legionella shakespearei
                • Legionella waltersii
                • Legionella drancourtii
                • Legionella massiliensis
              • Fluoribacter
                • Fluoribacter dumoffii
              • Tatlockia
                • Tatlockia micdadei
            • Coxiellaceae
              • Coxiella
                • Coxiella burnetii
              • Rickettsiella
                • Rickettsiella grylli
              • Aquicella
                • Aquicella lusitana
              • Candidatus Berkiella
                • Candidatus Berkiella cookevillensis
          • Chromatiales
            • Chromatiaceae
              • Thiocapsa
                • Thiocapsa roseopersicina
                • Thiocapsa marina
              • Nitrosococcus
                • Nitrosococcus oceani
                • Nitrosococcus halophilus
                • Nitrosococcus watsonii
              • Thiocystis
                • Thiocystis violascens
              • Thiodictyon
                • Candidatus Thiodictyon syntrophicum
              • Lamprocystis
                • Lamprocystis purpurea
              • Thiorhodococcus
                • Thiorhodococcus drewsii
              • Thiorhodovibrio
                • unclassified Thiorhodovibrio
              • Rheinheimera
                • Rheinheimera baltica
                • unclassified Rheinheimera
                • Rheinheimera pacifica
                • Rheinheimera perlucida
                • Rheinheimera nanhaiensis
              • unclassified Chromatiaceae
                • Chromatiaceae bacterium 2141T.STBD.0c.01a
              • Allochromatium
                • Allochromatium vinosum
                • Allochromatium warmingii
              • Marichromatium
                • Marichromatium purpuratum
              • Thioflavicoccus
                • Thioflavicoccus mobilis
              • Arsukibacterium
                • unclassified Arsukibacterium
              • Candidatus Tenderia
                • Candidatus Tenderia electrophaga
              • Candidatus Nitrosoglobus
                • Candidatus Nitrosoglobus terrae
              • Imhoffiella
                • Imhoffiella purpurea
              • Pararheinheimera
                • Pararheinheimera texasensis
            • Ectothiorhodospiraceae
              • Ectothiorhodospira
                • Ectothiorhodospira mobilis
                • Ectothiorhodospira haloalkaliphila
                • unclassified Ectothiorhodospira
              • Arhodomonas
                • Arhodomonas aquaeolei
              • Nitrococcus
                • Nitrococcus mobilis
              • Halorhodospira
                • Halorhodospira halochloris
                • Halorhodospira halophila
              • Thioalkalivibrio
                • Thioalkalivibrio versutus
                • Thioalkalivibrio paradoxus
                • Thioalkalivibrio thiocyanoxidans
                • Thioalkalivibrio nitratireducens
                • Thioalkalivibrio thiocyanodenitrificans
                • Thioalkalivibrio sulfidiphilus
                • unclassified Thioalkalivibrio
              • Alkalilimnicola
                • Alkalilimnicola ehrlichii
              • Thiorhodospira
                • Thiorhodospira sibirica
              • Thiohalomonas
                • Thiohalomonas denitrificans
              • Aquisalimonas
                • Aquisalimonas asiatica
              • Thiohalospira
                • Thiohalospira halophila
              • Spiribacter
                • Spiribacter salinus
                • Spiribacter curvatus
                • unclassified Spiribacter
              • Thioalbus
                • Thioalbus denitrificans
              • Thiogranum
                • Thiogranum longum
              • Halopeptonella
                • Halopeptonella vilamensis
              • Acidihalobacter
                • Acidihalobacter prosperus
            • Halothiobacillaceae
              • Halothiobacillus
                • Halothiobacillus neapolitanus
            • Granulosicoccaceae
              • Granulosicoccus
                • Granulosicoccus antarcticus
            • Chromatiales incertae sedis
              • Thiohalobacter
                • Thiohalobacter thiocyanaticus
            • Thioalkalispiraceae
              • Thiohalophilus
                • Thiohalophilus thiocyanatoxydans
            • Wenzhouxiangellaceae
              • Wenzhouxiangella
                • Wenzhouxiangella marina
            • Woeseiaceae
              • Woeseia
                • Woeseia oceani
          • Xanthomonadales
            • Xanthomonadaceae
              • Lysobacter
                • Lysobacter antibioticus
                • Lysobacter gummosus
                • Lysobacter daejeonensis
                • Lysobacter defluvii
                • Lysobacter dokdonensis
                • Lysobacter capsici
                • Lysobacter tolerans
                • unclassified Lysobacter
              • Xanthomonas
                • Xanthomonas campestris
                • Xanthomonas translucens
                • Xanthomonas oryzae
                • Xanthomonas albilineans
                • Xanthomonas fragariae
                • Xanthomonas axonopodis
                • Xanthomonas arboricola
                • Xanthomonas cassavae
                • Xanthomonas hortorum
                • Xanthomonas sacchari
                • Xanthomonas vasicola
                • Xanthomonas vesicatoria
                • Xanthomonas perforans
                • Xanthomonas euvesicatoria
                • Xanthomonas citri group
                • Xanthomonas maliensis
                • Xanthomonas massiliensis
                • Xanthomonas cannabis
                • Xanthomonas phaseoli
                • unclassified Xanthomonas
              • Xylella
                • Xylella fastidiosa
              • Stenotrophomonas
                • unclassified Stenotrophomonas
                • Stenotrophomonas rhizophila
                • Stenotrophomonas pavanii
                • Stenotrophomonas maltophilia group
                • Stenotrophomonas bentonitica
              • Luteimonas
                • Luteimonas mephitis
                • Luteimonas huabeiensis
                • unclassified Luteimonas
              • Pseudoxanthomonas
                • Pseudoxanthomonas taiwanensis
                • Pseudoxanthomonas suwonensis
                • Pseudoxanthomonas dokdonensis
                • Pseudoxanthomonas spadix
                • unclassified Pseudoxanthomonas
              • Thermomonas
                • Thermomonas haemolytica
                • Thermomonas hydrothermalis
                • Thermomonas fusca
              • Silanimonas
                • Silanimonas lenta
              • Arenimonas
                • Arenimonas composti
                • Arenimonas donghaensis
                • Arenimonas oryziterrae
                • Arenimonas metalli
              • Vulcaniibacterium
                • Vulcaniibacterium tengchongense
            • Rhodanobacteraceae
              • Frateuria
                • Frateuria aurantia
                • Frateuria terrea
                • unclassified Frateuria
              • Rhodanobacter
                • Rhodanobacter fulvus
                • Rhodanobacter spathiphylli
                • Rhodanobacter thiooxydans
                • Rhodanobacter glycinis
                • Rhodanobacter denitrificans
                • unclassified Rhodanobacter
              • Fulvimonas
                • Fulvimonas soli
              • Dyella
                • Dyella japonica
                • Dyella ginsengisoli
                • Dyella thiooxydans
                • Dyella jiangningensis
                • unclassified Dyella
              • Luteibacter
                • Luteibacter rhizovicinus
                • Luteibacter yeojuensis
                • unclassified Luteibacter
              • Aquimonas
                • Aquimonas voraii
              • Dokdonella
                • Dokdonella koreensis
                • Dokdonella fugitiva
                • Dokdonella immobilis
              • Rudaea
                • Rudaea cellulosilytica
              • Tahibacter
                • Tahibacter aquaticus
              • Mizugakiibacter
                • Mizugakiibacter sediminis
              • Oleiagrimonas
                • Oleiagrimonas soli
          • Cardiobacteriales
            • Cardiobacteriaceae
              • Dichelobacter
                • Dichelobacter nodosus
              • Cardiobacterium
                • Cardiobacterium hominis
                • Cardiobacterium valvarum
          • Methylococcales
            • Methylococcaceae
              • Methylococcus
                • Methylococcus capsulatus
              • Methylomonas
                • Methylomonas methanica
                • Methylomonas koyamae
                • Methylomonas denitrificans
                • unclassified Methylomonas
              • Methylobacter
                • Methylobacter luteus
                • Methylobacter marinus
                • Methylobacter whittenburyi
                • Methylobacter tundripaludum
                • unclassified Methylobacter
              • Methylomicrobium
                • Methylomicrobium agile
                • Methylomicrobium album
                • Methylomicrobium lacus
              • unclassified Methylococcaceae
                • Methylococcaceae bacterium
              • Methylocaldum
                • Methylocaldum szegediense
                • unclassified Methylocaldum
              • Methylosarcina
                • Methylosarcina fibrata
              • Methylovulum
                • Methylovulum miyakonense
                • Methylovulum psychrotolerans
              • Methylomarinum
                • Methylomarinum vadi
              • Methyloglobulus
                • Methyloglobulus morosus
              • Methyloprofundus
                • Methyloprofundus sedimenti
              • Methylomagnum
                • Methylomagnum ishizawai
              • Methyloterricola
                • Methyloterricola oryzae
              • Methylotuvimicrobium
                • Methylotuvimicrobium buryatense
                • Methylotuvimicrobium kenyense
                • Methylotuvimicrobium alcaliphilum
            • Methylothermaceae
              • Methylohalobius
                • Methylohalobius crimeensis
              • Methylothermus
          • Oceanospirillales
            • Halomonadaceae
              • Halomonas
                • Halomonas elongata
                • Halomonas halodenitrificans
                • Halomonas meridiana
                • Halomonas salina
                • Halomonas cupida
                • Halomonas muralis
                • Halomonas halocynthiae
                • Halomonas boliviensis
                • Halomonas ventosae
                • Halomonas anticariensis
                • Halomonas taeanensis
                • Halomonas gudaonensis
                • Halomonas saccharevitans
                • Halomonas arcis
                • Halomonas subterranea
                • Halomonas daqingensis
                • Halomonas shengliensis
                • Halomonas caseinilytica
                • Halomonas xianhensis
                • Halomonas lutea
                • Halomonas beimenensis
                • Halomonas stevensii
                • Halomonas jeotgali
                • Halomonas daqiaonensis
                • Halomonas smyrnensis
                • Halomonas zhanjiangensis
                • Halomonas xinjiangensis
                • Halomonas huangheensis
                • Halomonas zincidurans
                • unclassified Halomonas
              • Chromohalobacter
                • Chromohalobacter israelensis
                • Chromohalobacter salexigens
              • Carnimonas
                • Carnimonas nigrificans
              • Zymobacter group
                • Zymobacter
              • Cobetia
                • Cobetia crustatorum
                • Cobetia amphilecti
              • Halotalea
                • Halotalea alkalilenta
              • Kushneria
                • Kushneria aurantia
                • Kushneria sinocarnis
            • Oceanospirillaceae
              • Oceanospirillum
                • Oceanospirillum multiglobuliferum
                • Oceanospirillum beijerinckii
                • Oceanospirillum maris
              • Marinomonas
                • Marinomonas mediterranea
                • unclassified Marinomonas
                • Marinomonas ushuaiensis
                • Marinomonas aquiplantarum
                • Marinomonas posidonica
                • Marinomonas fungiae
                • Marinomonas profundimaris
                • Marinomonas spartinae
              • Marinobacterium
                • Marinobacterium stanieri
                • Marinobacterium jannaschii
                • Marinobacterium litorale
                • Marinobacterium rhizophilum
                • unclassified Marinobacterium
              • Marinospirillum
                • Marinospirillum minutulum
                • Marinospirillum alkaliphilum
                • Marinospirillum insulare
                • Marinospirillum celere
              • Neptunomonas
                • Neptunomonas japonica
              • Thalassolituus
                • Thalassolituus oleivorans
              • Oceanobacter
                • Oceanobacter kriegii
              • Nitrincola
                • Nitrincola lacisaponensis
                • Nitrincola nitratireducens
                • unclassified Nitrincola
              • Neptuniibacter
                • Neptuniibacter caesariensis
              • Amphritea
                • Amphritea atlantica
                • Amphritea japonica
              • Bermanella
                • Bermanella marisrubri
            • Oleiphilaceae
              • Oleiphilus
                • Oleiphilus messinensis
            • Alcanivoracaceae
              • Alcanivorax
                • Alcanivorax borkumensis
                • Alcanivorax jadensis
                • Alcanivorax dieselolei
                • Alcanivorax hongdengensis
                • Alcanivorax nanhaiticus
                • Alcanivorax pacificus
                • unclassified Alcanivorax
              • Marinicella
                • Marinicella litoralis
            • Hahellaceae
              • Hahella
                • Hahella chejuensis
                • Hahella ganghwensis
            • Saccharospirillaceae
              • Reinekea
                • Reinekea blandensis
              • Saccharospirillum
                • Saccharospirillum impatiens
              • Gynuella
                • Gynuella sunshinyii
            • unclassified Oceanospirillales
              • Oceanospirillales bacterium SCGC AD-311-J09
              • Oceanospirillales bacterium
            • Endozoicomonadaceae
              • Endozoicomonas
                • Endozoicomonas elysicola
                • Endozoicomonas montiporae
            • Balneatrichaceae
              • Balneatrix
                • Balneatrix alpica
            • Zooshikellaceae
              • Zooshikella
                • Zooshikella ganghwensis
          • Alteromonadales
            • Alteromonadaceae
              • Glaciecola
                • Glaciecola pallidula
                • Glaciecola nitratireducens
                • unclassified Glaciecola
              • unclassified Alteromonadaceae
                • Alteromonadaceae bacterium 2052S.S.stab0a.01
                • Alteromonadaceae bacterium Bs31
                • Alteromonadaceae bacterium 2753L.S.0a.02
                • Alteromonadaceae bacterium
              • Alishewanella
                • Alishewanella aestuarii
                • Alishewanella jeotgali
                • Alishewanella agri
              • Aestuariibacter
                • Aestuariibacter salexigens
              • Agarivorans
                • Agarivorans albus
              • Aliagarivorans
                • Aliagarivorans marinus
                • Aliagarivorans taiwanensis
              • Catenovulum
                • Catenovulum agarivorans
                • Catenovulum maritimum
              • Gayadomonas
                • Gayadomonas joobiniege
              • Aliiglaciecola
                • Aliiglaciecola lipolytica
              • Paraglaciecola
                • Paraglaciecola polaris
                • Paraglaciecola psychrophila
                • Paraglaciecola chathamensis
                • Paraglaciecola agarilytica
                • Paraglaciecola arctica
                • unclassified Paraglaciecola
              • Alteromonas/Salinimonas group
                • Alteromonas
                • Salinimonas
            • Pseudoalteromonadaceae
              • Pseudoalteromonas
                • Pseudoalteromonas haloplanktis
                • Pseudoalteromonas atlantica
                • Pseudoalteromonas citrea
                • Pseudoalteromonas denitrificans
                • Pseudoalteromonas luteoviolacea
                • Pseudoalteromonas rubra
                • Pseudoalteromonas undina
                • Pseudoalteromonas piscicida
                • Pseudoalteromonas ulvae
                • Pseudoalteromonas flavipulchra
                • Pseudoalteromonas ruthenica
                • Pseudoalteromonas translucida
                • Pseudoalteromonas agarivorans
                • unclassified Pseudoalteromonas
                • Pseudoalteromonas marina
                • Pseudoalteromonas spongiae
                • Pseudoalteromonas tunicata
                • Pseudoalteromonas lipolytica
              • Algicola
                • Algicola sagamiensis
            • Colwelliaceae
              • Colwellia
                • Colwellia psychrerythraea
                • unclassified Colwellia
                • Colwellia piezophila
              • Thalassomonas
                • Thalassomonas viridans
                • Thalassomonas actiniarum
              • Thalassotalea
                • Thalassotalea agarivorans
                • unclassified Thalassotalea
            • Shewanellaceae
              • Shewanella
                • Shewanella colwelliana
                • Shewanella putrefaciens
                • Shewanella algae
                • Shewanella benthica
                • Shewanella frigidimarina
                • Shewanella violacea
                • Shewanella amazonensis
                • Shewanella baltica
                • Shewanella oneidensis
                • Shewanella pealeana
                • Shewanella fidelis
                • Shewanella denitrificans
                • unclassified Shewanella
                • Shewanella waksmanii
                • Shewanella decolorationis
                • Shewanella halifaxensis
                • Shewanella loihica
                • Shewanella marina
            • Moritellaceae
              • Moritella
                • Moritella marina
                • Moritella dasanensis
                • unclassified Moritella
            • Ferrimonadaceae
              • Ferrimonas
                • Ferrimonas balearica
                • Ferrimonas kyonanensis
                • Ferrimonas futtsuensis
                • Ferrimonas senticii
            • Idiomarinaceae
              • Idiomarina
                • Idiomarina loihiensis
                • Idiomarina xiamenensis
                • unclassified Idiomarina
              • unclassified Idiomarinaceae
                • Idiomarinaceae bacterium HL-53
              • Pseudidiomarina
                • Pseudidiomarina sediminum
                • Pseudidiomarina salinarum
                • Pseudidiomarina donghaiensis
                • Pseudidiomarina atlantica
            • Psychromonadaceae
              • Psychromonas
                • Psychromonas arctica
                • Psychromonas hadalis
                • Psychromonas ingrahamii
                • Psychromonas aquimarina
                • Psychromonas ossibalaenae
            • unclassified Alteromonadales
              • gamma proteobacterium IMCC1989
              • Alteromonadales bacterium
          • Vibrionales
            • Vibrionaceae
              • Photobacterium
                • Photobacterium phosphoreum
                • Photobacterium angustum
                • Photobacterium damselae
                • Photobacterium iliopiscarium
                • Photobacterium profundum
                • Photobacterium halotolerans
                • Photobacterium leiognathi
                • Photobacterium marinum
                • unclassified Photobacterium
              • Vibrio
                • Vibrio cholerae
                • Vibrio vulnificus
                • Vibrio mimicus
                • Vibrio fluvialis
                • Vibrio diazotrophicus
                • Vibrio gazogenes
                • Vibrio mediterranei
                • Vibrio metschnikovii
                • Vibrio nigripulchritudo
                • Vibrio furnissii
                • Vibrio navarrensis
                • Vibrio splendidus
                • Vibrio scophthalmi
                • Vibrio cyclitrophicus
                • Vibrio anguillarum
                • Vibrio halioticoli
                • Vibrio rumoiensis
                • Vibrio ichthyoenteri
                • Vibrio coralliilyticus
                • Vibrio tasmaniensis
                • Vibrio fortis
                • Vibrio crassostreae
                • Vibrio ezurae
                • Vibrio rhizosphaerae
                • Vibrio hangzhouensis
                • Vibrio breoganii
                • Vibrio caribbeanicus
                • Vibrio harveyi group
                • Vibrio genomosp. F10
                • Vibrio genomosp. F6
                • Vibrio xiamenensis
                • Vibrio mexicanus
                • Vibrio renipiscarius
                • Vibrio cidicii
                • Vibrio oreintalis group
                • unclassified Vibrio
              • Salinivibrio
                • Salinivibrio costicola
                • Salinivibrio socompensis
              • Enterovibrio
                • Enterovibrio calviensis
                • Enterovibrio norvegicus
              • Grimontia
                • Grimontia hollisae
                • Grimontia indica
              • Aliivibrio
                • Aliivibrio fischeri
                • Aliivibrio logei
                • Aliivibrio salmonicida
          • Aeromonadales
            • Succinivibrionaceae
              • Ruminobacter
                • Ruminobacter amylophilus
              • Succinimonas
                • Succinimonas amylolytica
              • Succinivibrio
                • Succinivibrio dextrinosolvens
              • Succinatimonas
                • Succinatimonas hippei
            • Aeromonadaceae
              • Aeromonas
                • Aeromonas hydrophila
                • Aeromonas salmonicida
                • Aeromonas caviae
                • Aeromonas media
                • Aeromonas veronii
                • Aeromonas enteropelogenes
                • Aeromonas popoffii
                • Aeromonas dhakensis
                • unclassified Aeromonas
                • Aeromonas molluscorum
                • Aeromonas diversa
                • Aeromonas taiwanensis
              • Tolumonas
                • Tolumonas auensis
                • Tolumonas lignilytica
              • Oceanimonas
                • Oceanimonas doudoroffii
                • Oceanimonas smirnovii
                • unclassified Oceanimonas
              • Dongshaea
                • Dongshaea marina