Sample 3300029849

Overview

Basic Information
IMG/M Taxon OID	3300029849 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0133139 \| Gp0283921 \| Ga0245286
Sample Name	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37174
Sequencing Status	Permanent Draft
Sequencing Center	Beijing Genomics Institute (BGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	134201519
Sequencing Scaffolds	10
Novel Protein Genes	11
Associated Families	11

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Gemmiger → Gemmiger formicilis	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus subtilis group → Bacillus atrophaeus	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Human Fecal Microbial Communities From Twins In The Twinsuk Registry In London, United Kingdom
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Twins In The Twinsuk Registry In London, United Kingdom

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Unclassified

Location Information
Location	United Kingdom: London
Coordinates	Lat. (^o)	51.5	Long. (^o)	-0.12	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F032286	Metagenome / Metatranscriptome	180	Y
F052660	Metagenome	142	N
F074964	Metagenome	119	N
F076190	Metagenome	118	Y
F078693	Metagenome	116	N
F080163	Metagenome	115	N
F090484	Metagenome	108	N
F090513	Metagenome	108	N
F090514	Metagenome	108	N
F099406	Metagenome	103	N
F101355	Metagenome	102	N

Family

Category

Number of Sequences

3D Structure?

F032286

Metagenome / Metatranscriptome

180

F052660

Metagenome

142

F074964

Metagenome

119

F076190

Metagenome

118

F078693

Metagenome

116

F080163

Metagenome

115

F090484

Metagenome

108

F090513

Metagenome

108

F090514

Metagenome

108

F099406

Metagenome

103

F101355

Metagenome

102

Scaffold	Taxonomy	Length	IMG/M Link
Ga0245286_100411	Not Available	43866	Open in IMG/M
Ga0245286_100473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	39298	Open in IMG/M
Ga0245286_101207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Gemmiger → Gemmiger formicilis	16127	Open in IMG/M
Ga0245286_101473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	13377	Open in IMG/M
Ga0245286_101939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Gemmiger → Gemmiger formicilis	10229	Open in IMG/M
Ga0245286_104090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	4970	Open in IMG/M
Ga0245286_108909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus subtilis group → Bacillus atrophaeus	2384	Open in IMG/M
Ga0245286_111109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1907	Open in IMG/M
Ga0245286_115981	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
Ga0245286_126212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	686	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0245286_100411

Not Available

43866

Open in IMG/M

Ga0245286_100473

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii

39298

Open in IMG/M

Ga0245286_101207

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Gemmiger → Gemmiger formicilis

16127

Open in IMG/M

Ga0245286_101473

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii

13377

Open in IMG/M

Ga0245286_101939

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Gemmiger → Gemmiger formicilis

10229

Open in IMG/M

Ga0245286_104090

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae

4970

Open in IMG/M

Ga0245286_108909

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus subtilis group → Bacillus atrophaeus

2384

Open in IMG/M

Ga0245286_111109

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes

1907

Open in IMG/M

Ga0245286_115981

All Organisms → cellular organisms → Bacteria

1283

Open in IMG/M

Ga0245286_126212

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae

686

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0245286_100411	Ga0245286_10041110	F099406	MAEVGYNSKFEGQEVDSRLENVVQAVPGTGSESGKGGLIPAPPAGSQDGSKTLLSNMTWGDHVTKQYIDDAVSAAGWKKQIVSKLPTVEEAKDNVMYLVKDDVASTETKNVYNEYILVTEEGGGKVLESLGMVSTGVDPTYLDLSIFPSTSGTLDEDSYAKVLNAYNNNITLGKFSFYYFSLDYFLDNDNSELKIIAVLFNNTNSKEDVSGSYIDIEMVTYIVAQDKTYRAIANTATLFNTMLSYLKFMAKTPNIVTTLASLPIDAHNIIANVASATNLSMAVSAEDVGREWQVRVNNTTGTDITQPLPTSGLFQSMSGNSVVVPKKSFIELSIWYINDKLVIRVGKQA
Ga0245286_100411	Ga0245286_10041131	F090484	MNRMDIPKNPSDFFLLRYSVKPLLLSICFSDGSMSKIMKIQLGRNINISLRLLERWSDDLLFMELYALYCMIKISRRDSRIRFKNQKDLLHKLGIGYSKFKNMTGHPMFNELFRVTDSTFVARRYRVNGVQLTLGCGKVSLPKNRILIKIKKNEITNHEKVLDRIKEAMFVNLVRNNESVLNSGETNSQADVVDGSHSYYGLIDSTISNKTIALYLNVGLTKAKEIVGMAIQDKLVKRFENIQFITYVDNPRAYIEANEHNYPIGKLIPVYRHGAVFWQIANTWALYKKGATNRWYFGEKDIEKGEKEKVSKKDDFNFFLKDNTHILRFLNAEEVVSEYGEILGIDRKKTKEEEARSLASAMAKEAHKDFWDGYERSTQNQIVRKYYRAIIAEDKKRRMDMFLNRLKQSYDKVSGWSKEKVATVKAGLADAEACCAEVGTSVAGVCGRVSRRMKSYNNTVSDKKAGFNEVRDMYAEFAGEMAKAVGSVSEDIYTYVKAEQFKEKIENMDISAQSLPNISITVDNDKELDGESVFKDIPFEELSFYNDTYLYPSSQYSSL
Ga0245286_100473	Ga0245286_10047340	F078693	MWNIGSFSFERLHAPVRGAERFYVKWNCSLLMSKENQKTTSDFDALDPRERGCSPLSDPEGEVETEKS
Ga0245286_101207	Ga0245286_1012079	F101355	MIEPPFQHGIADMAFWFIQWYLPSAQPPQPKGAGAVFSYVLPRCSYFFKIFVTEMSIFICMHKCLAQTGRLRGSSCHIVVAAKRACACTFLWISDHFYKKLLPYVLFFFLKIYLKKIDFFQNIA
Ga0245286_101473	Ga0245286_1014736	F090514	MNLRIHALKKASRQRPGVKTAAARFFSILYYPFCAKRSSFFQQNVQPRGNFFANRPIFVYFADIPPRLTGAKWFVILLTIVPAGSRARAGSSLPLSPATNIFLKQTPRRGLPLAWNAGAGSFLFCG
Ga0245286_101939	Ga0245286_1019399	F090513	MAKYVRKMEWKLLHIKHILYMQPFGALKIVPQSVGNKNGTKAVLQGWAAAFVPYMLSFTYGNTA
Ga0245286_104090	Ga0245286_1040901	F052660	MCILHVLPENTPEKIGQERAGTEWTVVKSKIRLCIRNRSCGRFLHGGILMGIALPIPSHRAKSHDFACWWPAAAGHSRSADALPGKSNS
Ga0245286_108909	Ga0245286_1089091	F074964	MITKKNVNKLQNAVIKENAANLVGAVKLYNALFANGADLKAICKALEIPAEYAVKVAALAKDKKRLVAVCSQMLPKVDDIFVKFTLYSKVYKDTNVDKEKGIEAKTADWCAENVVYGSEYKAFGFTTAESLETKKSTKWLIKETDEYKATYVAVKIKSYSIRTVAKCVSEYLAHESTQQ
Ga0245286_111109	Ga0245286_1111092	F032286	VTPVRHSALIFDTRLSAGNAANDVLITGSTFHFCRLTCLCVKRRNVILNGKRRSLLDSTLFHADNRTEQKTISPFSLALIFTFDFAALSERRSCPEDRSRRFVLLGALDAALRRRTYPVRTVMQFSRFRCDYKTILAKNIALSRISKR
Ga0245286_115981	Ga0245286_1159812	F076190	CHYGNGRSSWARTADGSITISAKNVFTAASRVSGRVWSLVRITVPNGLKSVKIGVEKPQNNFLYPYFQREPL
Ga0245286_126212	Ga0245286_1262121	F080163	MKTIKFLQESFETEERFQQEISFKYSYNRDTVESIDFRINQHNIRYFYEAMQNFENFLVNEVKEKKNNFCDAKQFLESINDFDKIIFVIITYMKTYFDFCKNYSKISLHVHLVQFDFTTSVLIQGFYNYSYKDLSFSTKLESEILGSEIELLQEKLDLIREELCKLIGLDPNLQKKGHDENYIFNLNIDSDNQIGFFL

Scaffold ID

Protein ID

Family

Sequence

Ga0245286_100411

Ga0245286_10041110

F099406

MAEVGYNSKFEGQEVDSRLENVVQAVPGTGSESGKGGLIPAPPAGSQDGSKTLLSNMTWGDHVTKQYIDDAVSAAGWKKQIVSKLPTVEEAKDNVMYLVKDDVASTETKNVYNEYILVTEEGGGKVLESLGMVSTGVDPTYLDLSIFPSTSGTLDEDSYAKVLNAYNNNITLGKFSFYYFSLDYFLDNDNSELKIIAVLFNNTNSKEDVSGSYIDIEMVTYIVAQDKTYRAIANTATLFNTMLSYLKFMAKTPNIVTTLASLPIDAHNIIANVASATNLSMAVSAEDVGREWQVRVNNTTGTDITQPLPTSGLFQSMSGNSVVVPKKSFIELSIWYINDKLVIRVGKQA

Ga0245286_100411

Ga0245286_10041131

F090484

MNRMDIPKNPSDFFLLRYSVKPLLLSICFSDGSMSKIMKIQLGRNINISLRLLERWSDDLLFMELYALYCMIKISRRDSRIRFKNQKDLLHKLGIGYSKFKNMTGHPMFNELFRVTDSTFVARRYRVNGVQLTLGCGKVSLPKNRILIKIKKNEITNHEKVLDRIKEAMFVNLVRNNESVLNSGETNSQADVVDGSHSYYGLIDSTISNKTIALYLNVGLTKAKEIVGMAIQDKLVKRFENIQFITYVDNPRAYIEANEHNYPIGKLIPVYRHGAVFWQIANTWALYKKGATNRWYFGEKDIEKGEKEKVSKKDDFNFFLKDNTHILRFLNAEEVVSEYGEILGIDRKKTKEEEARSLASAMAKEAHKDFWDGYERSTQNQIVRKYYRAIIAEDKKRRMDMFLNRLKQSYDKVSGWSKEKVATVKAGLADAEACCAEVGTSVAGVCGRVSRRMKSYNNTVSDKKAGFNEVRDMYAEFAGEMAKAVGSVSEDIYTYVKAEQFKEKIENMDISAQSLPNISITVDNDKELDGESVFKDIPFEELSFYNDTYLYPSSQYSSL

Ga0245286_100473

Ga0245286_10047340

F078693

MWNIGSFSFERLHAPVRGAERFYVKWNCSLLMSKENQKTTSDFDALDPRERGCSPLSDPEGEVETEKS

Ga0245286_101207

Ga0245286_1012079

F101355

MIEPPFQHGIADMAFWFIQWYLPSAQPPQPKGAGAVFSYVLPRCSYFFKIFVTEMSIFICMHKCLAQTGRLRGSSCHIVVAAKRACACTFLWISDHFYKKLLPYVLFFFLKIYLKKIDFFQNIA

Ga0245286_101473

Ga0245286_1014736

F090514

MNLRIHALKKASRQRPGVKTAAARFFSILYYPFCAKRSSFFQQNVQPRGNFFANRPIFVYFADIPPRLTGAKWFVILLTIVPAGSRARAGSSLPLSPATNIFLKQTPRRGLPLAWNAGAGSFLFCG

Ga0245286_101939

Ga0245286_1019399

F090513

MAKYVRKMEWKLLHIKHILYMQPFGALKIVPQSVGNKNGTKAVLQGWAAAFVPYMLSFTYGNTA

Ga0245286_104090

Ga0245286_1040901

F052660

MCILHVLPENTPEKIGQERAGTEWTVVKSKIRLCIRNRSCGRFLHGGILMGIALPIPSHRAKSHDFACWWPAAAGHSRSADALPGKSNS

Ga0245286_108909

Ga0245286_1089091

F074964

MITKKNVNKLQNAVIKENAANLVGAVKLYNALFANGADLKAICKALEIPAEYAVKVAALAKDKKRLVAVCSQMLPKVDDIFVKFTLYSKVYKDTNVDKEKGIEAKTADWCAENVVYGSEYKAFGFTTAESLETKKSTKWLIKETDEYKATYVAVKIKSYSIRTVAKCVSEYLAHESTQQ

Ga0245286_111109

Ga0245286_1111092

F032286

VTPVRHSALIFDTRLSAGNAANDVLITGSTFHFCRLTCLCVKRRNVILNGKRRSLLDSTLFHADNRTEQKTISPFSLALIFTFDFAALSERRSCPEDRSRRFVLLGALDAALRRRTYPVRTVMQFSRFRCDYKTILAKNIALSRISKR

Ga0245286_115981

Ga0245286_1159812

F076190

CHYGNGRSSWARTADGSITISAKNVFTAASRVSGRVWSLVRITVPNGLKSVKIGVEKPQNNFLYPYFQREPL

Ga0245286_126212

Ga0245286_1262121

F080163

MKTIKFLQESFETEERFQQEISFKYSYNRDTVESIDFRINQHNIRYFYEAMQNFENFLVNEVKEKKNNFCDAKQFLESINDFDKIIFVIITYMKTYFDFCKNYSKISLHVHLVQFDFTTSVLIQGFYNYSYKDLSFSTKLESEILGSEIELLQEKLDLIREELCKLIGLDPNLQKKGHDENYIFNLNIDSDNQIGFFL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300029849: Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37174

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences