Metagenome Family F089053

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089053
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	58 residues
Representative Sequence	MEGPRPDKFAFGVRIGRVVDGCRPIKGCIRKWIYGSANGQPELSTAEEVNVKNMEAFL
Number of Associated Samples	102
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	12.84 %
% of genes near scaffold ends (potentially truncated)	13.76 %
% of genes from short scaffolds (< 2000 bps)	33.03 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal (33.945 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal distal gut (65.138 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.60% β-sheet: 0.00% Coil/Unstructured: 81.40%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00589	Phage_integrase	9.17
PF00392	GntR	9.17
PF14659	Phage_int_SAM_3	6.42
PF00152	tRNA-synt_2	4.59
PF03600	CitMHS	4.59
PF08244	Glyco_hydro_32C	4.59
PF08901	DUF1847	3.67
PF07729	FCD	2.75
PF05681	Fumerase	2.75
PF09223	ZinT	2.75
PF09035	Tn916-Xis	2.75
PF01638	HxlR	1.83
PF13443	HTH_26	1.83
PF01547	SBP_bac_1	1.83
PF02452	PemK_toxin	1.83
PF05272	VirE	1.83
PF13377	Peripla_BP_3	1.83
PF05683	Fumerase_C	1.83
PF03449	GreA_GreB_N	1.83
PF06250	YhcG_C	0.92
PF04205	FMN_bind	0.92
PF08665	PglZ	0.92
PF13487	HD_5	0.92
PF02632	BioY	0.92
PF02534	T4SS-DNA_transf	0.92
PF13641	Glyco_tranf_2_3	0.92
PF01695	IstB_IS21	0.92
PF08706	D5_N	0.92
PF00528	BPD_transp_1	0.92
PF02872	5_nucleotid_C	0.92
PF00005	ABC_tran	0.92
PF13280	WYL	0.92
PF04754	Transposase_31	0.92
PF04854	DUF624	0.92
PF01243	Putative_PNPOx	0.92
PF01443	Viral_helicase1	0.92
PF00149	Metallophos	0.92
PF01297	ZnuA	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.59
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	4.59
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	4.59
COG1621	Sucrose-6-phosphate hydrolase SacC, GH32 family	Carbohydrate transport and metabolism [G]	4.59
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.59
COG4887	Uncharacterized metal-binding protein MJ0455, DUF1847 family	Function unknown [S]	3.67
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	2.75
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	2.75
COG1951	Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain	Energy production and conversion [C]	2.75
COG1838	Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain	Energy production and conversion [C]	1.83
COG5545	Predicted P-loop ATPase and inactivated derivatives	Mobilome: prophages, transposons [X]	1.83
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	1.83
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.83
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	1.83
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.92
COG1268	Biotin transporter BioY	Coenzyme transport and metabolism [H]	0.92
COG3505	Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase	Intracellular trafficking, secretion, and vesicular transport [U]	0.92
COG4804	Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family	General function prediction only [R]	0.92
COG5464	Recombination-promoting DNA endonuclease RpnC/YadD	Replication, recombination and repair [L]	0.92
COG0737	2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or 3'-nucleotidase, 5'-nucleotidase family	Defense mechanisms [V]	0.92
COG5578	Uncharacterized membrane protein YesL	Function unknown [S]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	97.25 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	94.50 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	87.16 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	87.16 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	74.31 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Faecalibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium	71.56 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Faecalibacterium prausnitzii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	64.22 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.92 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000273\|EM039_1079169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	1214	Open in IMG/M
3300000291\|EM293_1012517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	556	Open in IMG/M
3300003140\|Ga0051081_1007490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	3827	Open in IMG/M
3300006298\|Ga0099618_117562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	530	Open in IMG/M
3300006739\|Ga0101793_100763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	27232	Open in IMG/M
3300006747\|Ga0101801_101148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	18102	Open in IMG/M
3300007105\|Ga0102630_105198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3891	Open in IMG/M
3300007222\|Ga0104061_109203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	3409	Open in IMG/M
3300007362\|Ga0104788_127767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	598	Open in IMG/M
3300007524\|Ga0105481_1030162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium	957	Open in IMG/M
3300007530\|Ga0104842_106965	All Organisms → cellular organisms → Bacteria	2380	Open in IMG/M
3300007657\|Ga0105536_133832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	652	Open in IMG/M
3300007664\|Ga0105542_1010746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	2776	Open in IMG/M
3300007742\|Ga0105758_1009612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	2795	Open in IMG/M
3300007793\|Ga0105888_103916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	7438	Open in IMG/M
3300008058\|Ga0114167_108424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	1071	Open in IMG/M
3300008096\|Ga0114155_1039411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium	864	Open in IMG/M
3300008404\|Ga0115185_103344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	5808	Open in IMG/M
3300008496\|Ga0115078_101937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	11098	Open in IMG/M
3300008571\|Ga0111077_113669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	1812	Open in IMG/M
3300008620\|Ga0111272_100545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	32645	Open in IMG/M
3300008705\|Ga0113869_1002218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	12872	Open in IMG/M
3300014543\|Ga0169722_121433	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300014566\|Ga0134372_1000152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium	38695	Open in IMG/M
3300014566\|Ga0134372_1009492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	1953	Open in IMG/M
3300014651\|Ga0134488_100220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	6057	Open in IMG/M
3300014757\|Ga0134375_100039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	99096	Open in IMG/M
3300014776\|Ga0134555_1023756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	837	Open in IMG/M
3300014939\|Ga0134458_101535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	4968	Open in IMG/M
3300014946\|Ga0169857_104039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium	2975	Open in IMG/M
3300023499\|Ga0257052_104021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	5864	Open in IMG/M
3300023506\|Ga0257040_113791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	2622	Open in IMG/M
3300029010\|Ga0169625_100504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	31721	Open in IMG/M
3300029010\|Ga0169625_100572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	28165	Open in IMG/M
3300029015\|Ga0169650_126178	All Organisms → cellular organisms → Bacteria → Terrabacteria group	555	Open in IMG/M
3300029024\|Ga0169709_103545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	4532	Open in IMG/M
3300029031\|Ga0169626_100237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	59770	Open in IMG/M
3300029036\|Ga0169607_1006922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	2815	Open in IMG/M
3300029036\|Ga0169607_1043040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	694	Open in IMG/M
3300029040\|Ga0169694_109099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	1474	Open in IMG/M
3300029044\|Ga0169677_1007837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	3894	Open in IMG/M
3300029045\|Ga0169661_100124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	102217	Open in IMG/M
3300029050\|Ga0169629_125286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	994	Open in IMG/M
3300029055\|Ga0169617_103606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	6978	Open in IMG/M
3300029092\|Ga0169182_108786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	3047	Open in IMG/M
3300029098\|Ga0169171_114314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	796	Open in IMG/M
3300029112\|Ga0168820_105188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2852	Open in IMG/M
3300029114\|Ga0168819_102077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	9087	Open in IMG/M
3300029128\|Ga0168745_127772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	679	Open in IMG/M
3300029131\|Ga0168790_144800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	551	Open in IMG/M
3300029135\|Ga0168740_105894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	4729	Open in IMG/M
3300029136\|Ga0168747_102868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	8382	Open in IMG/M
3300029188\|Ga0169196_100202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	70888	Open in IMG/M
3300029195\|Ga0167502_106516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	2491	Open in IMG/M
3300029218\|Ga0168718_102129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	7980	Open in IMG/M
3300029234\|Ga0168698_101650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	18899	Open in IMG/M
3300029237\|Ga0167477_102194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	10506	Open in IMG/M
3300029245\|Ga0168762_118497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1501	Open in IMG/M
3300029333\|Ga0243760_102623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	16231	Open in IMG/M
3300029333\|Ga0243760_115289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	1877	Open in IMG/M
3300029340\|Ga0243727_1003527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	8114	Open in IMG/M
3300029341\|Ga0243736_1040735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	829	Open in IMG/M
3300029343\|Ga0243725_1008873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	4755	Open in IMG/M
3300029359\|Ga0243835_1001228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	23341	Open in IMG/M
3300029374\|Ga0243945_1002801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	10051	Open in IMG/M
3300029381\|Ga0243902_1027544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1559	Open in IMG/M
3300029391\|Ga0243992_109745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	2462	Open in IMG/M
3300029393\|Ga0243986_1004391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	5835	Open in IMG/M
3300029413\|Ga0243792_1006639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2957	Open in IMG/M
3300029430\|Ga0243922_101424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	27612	Open in IMG/M
3300029431\|Ga0243758_1004038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	9072	Open in IMG/M
3300029438\|Ga0243733_1012501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	2631	Open in IMG/M
3300029444\|Ga0243728_1003023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	10082	Open in IMG/M
3300029444\|Ga0243728_1014607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	2457	Open in IMG/M
3300029458\|Ga0244161_100715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	23095	Open in IMG/M
3300029469\|Ga0244168_103347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	4454	Open in IMG/M
3300029483\|Ga0244102_104638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	5634	Open in IMG/M
3300029489\|Ga0244014_1000443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	41409	Open in IMG/M
3300029493\|Ga0244010_1005269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	6805	Open in IMG/M
3300029524\|Ga0244794_135930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium	881	Open in IMG/M
3300029552\|Ga0245113_111552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	1782	Open in IMG/M
3300029557\|Ga0245120_102347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	8696	Open in IMG/M
3300029557\|Ga0245120_115929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	1306	Open in IMG/M
3300029595\|Ga0245140_101303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	21147	Open in IMG/M
3300029612\|Ga0245127_125233	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300029614\|Ga0245155_116113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	2035	Open in IMG/M
3300029620\|Ga0245130_116026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2048	Open in IMG/M
3300029622\|Ga0245124_1001781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	23956	Open in IMG/M
3300029653\|Ga0245224_116077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	867	Open in IMG/M
3300029684\|Ga0245194_100885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	38215	Open in IMG/M
3300029708\|Ga0245189_110729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	2581	Open in IMG/M
3300029708\|Ga0245189_115330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium	1721	Open in IMG/M
3300029710\|Ga0245233_118823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	1635	Open in IMG/M
3300029717\|Ga0245160_1063960	All Organisms → cellular organisms → Bacteria → Terrabacteria group	657	Open in IMG/M
3300029731\|Ga0245178_114726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium	1307	Open in IMG/M
3300029733\|Ga0245176_102400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	8969	Open in IMG/M
3300029737\|Ga0245199_101100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	23801	Open in IMG/M
3300029746\|Ga0245173_111180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	2611	Open in IMG/M
3300029768\|Ga0245196_104914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	5923	Open in IMG/M
3300029785\|Ga0243763_1062553	All Organisms → cellular organisms → Bacteria → Terrabacteria group	502	Open in IMG/M
3300029815\|Ga0244882_1004466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	9960	Open in IMG/M
3300029853\|Ga0245292_103612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	8299	Open in IMG/M
3300029855\|Ga0245295_1043614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	736	Open in IMG/M
3300029857\|Ga0245297_1010061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	3837	Open in IMG/M
3300029860\|Ga0245305_1004495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	7543	Open in IMG/M
3300029873\|Ga0245321_102178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	15799	Open in IMG/M
7000000040\|SRS043411_WUGC_scaffold_25921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium	961	Open in IMG/M
7000000300\|SRS043701_LANL_scaffold_10863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	598	Open in IMG/M
7000000559\|SRS058723_Baylor_scaffold_9589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	4861	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Human	Host-Associated → Human	100.00%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Human → Digestive System	100.00%

Habitat	Taxonomy	Distribution
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	100.00%

Habitat	Taxonomy	Distribution
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	100.00%

Habitat	Taxonomy	Distribution
Human Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal	33.95%
Human	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human	20.18%
Human Feces	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Feces	17.43%
Human Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Host-Associated	15.60%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	10.09%
Human Gut	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Gut	1.83%
Huma Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Huma Fecal	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000273	Human fecal microbial communities from Cork, Ireland - EM039	Host-Associated	Open in IMG/M
3300000291	Human fecal microbial communities from Cork, Ireland - EM293	Host-Associated	Open in IMG/M
3300003140	Human fecal microbial communities from Washington University at St. Louis, Missouri, USA, of twins - TS29	Host-Associated	Open in IMG/M
3300006298	Human stool microbial communities from NIH, USA - visit 1, subject 737052003	Host-Associated	Open in IMG/M
3300006739	Human stool microbial communities from NIH, USA - visit 1, subject 159632143	Host-Associated	Open in IMG/M
3300006747	Human stool microbial communities from NIH, USA - visit 1, subject 160218816	Host-Associated	Open in IMG/M
3300007105	Human stool microbial communities from NIH, USA - visit 2, subject 764447348	Host-Associated	Open in IMG/M
3300007222	Human stool microbial communities from NIH, USA - visit 1, subject 706846339	Host-Associated	Open in IMG/M
3300007362	Human stool microbial communities from NIH, USA - visit 1, subject 675950834 reassembly	Host-Associated	Open in IMG/M
3300007524	Human stool microbial communities from NIH, USA - visit 1, subject 763496533 reassembly	Host-Associated	Open in IMG/M
3300007530	Human stool microbial communities from NIH, USA - visit 1, subject 809635352 reassembly	Host-Associated	Open in IMG/M
3300007657	Human stool microbial communities from NIH, USA - visit 2, subject 158479027 reassembly	Host-Associated	Open in IMG/M
3300007664	Human stool microbial communities from NIH, USA - visit 1, subject 765074482 reassembly	Host-Associated	Open in IMG/M
3300007742	Human stool microbial communities from NIH, USA - visit 1, subject 763577454 reassembly	Host-Associated	Open in IMG/M
3300007793	Human stool microbial communities from NIH, USA - visit 2, subject 763860675 reassembly	Host-Associated	Open in IMG/M
3300008058	Human stool microbial communities from NIH, USA - visit 2, subject 159510762 reassembly	Host-Associated	Open in IMG/M
3300008096	Human stool microbial communities from NIH, USA - visit 1, subject 765701615 reassembly	Host-Associated	Open in IMG/M
3300008404	Human stool microbial communities from NIH, USA - visit 2, subject 764002286 reassembly	Host-Associated	Open in IMG/M
3300008496	Human stool microbial communities from NIH, USA - visit 1, subject 160178356 reassembly	Host-Associated	Open in IMG/M
3300008571	Human stool microbial communities from NIH, USA - visit 1, subject 763901136 reassembly	Host-Associated	Open in IMG/M
3300008620	Human stool microbial communities from NIH, USA - visit 1, subject 763536994 reassembly	Host-Associated	Open in IMG/M
3300008705	Human stool microbial communities from NIH, USA - visit 1, subject 763982056 reassembly	Host-Associated	Open in IMG/M
3300014543	Human fecal microbial communities from infant at 12 months in Denmark - 511_12M	Host-Associated	Open in IMG/M
3300014566	Human fecal microbial communities from obese patients in Germany - AS58_18	Host-Associated	Open in IMG/M
3300014651	Human fecal microbial communities from ulcerative colitis therapy, University of Washington - UWIBD01P271T3	Host-Associated	Open in IMG/M
3300014757	Human fecal microbial communities from obese patients in Germany - AS53_3	Host-Associated	Open in IMG/M
3300014776	Human fecal microbial community of Hadza hunter-gatherer populations from Tanzania - 10002	Host-Associated	Open in IMG/M
3300014939	Human fecal microbial communities from obese patients in Germany - AS66_6	Host-Associated	Open in IMG/M
3300014946	Human fecal microbial communities from infant at 12 months in Denmark - 635_12M	Host-Associated	Open in IMG/M
3300023499	Human gut microbial communities from healthy child feces in Northridge, California, USA - CDI_69C	Host-Associated	Open in IMG/M
3300023506	Human gut microbial communities from healthy child feces in Northridge, California, USA - CDI_182B	Host-Associated	Open in IMG/M
3300029010	Human fecal microbial communities from mother in Denmark - 275_M	Host-Associated	Open in IMG/M
3300029015	Human fecal microbial communities from infant at 12 months in Denmark - 338_12M	Host-Associated	Open in IMG/M
3300029024	Human fecal microbial communities from mother in Denmark - 45_M	Host-Associated	Open in IMG/M
3300029031	Human fecal microbial communities from infant at 12 months in Denmark - 276_12M	Host-Associated	Open in IMG/M
3300029036	Human fecal microbial communities from mother in Denmark - 265_M	Host-Associated	Open in IMG/M
3300029040	Human fecal microbial communities from infant at 12 months in Denmark - 39_12M	Host-Associated	Open in IMG/M
3300029044	Human fecal microbial communities from mother in Denmark - 377_M	Host-Associated	Open in IMG/M
3300029045	Human fecal microbial communities from mother in Denmark - 343_M	Host-Associated	Open in IMG/M
3300029050	Human fecal microbial communities from mother in Denmark - 276_M	Host-Associated	Open in IMG/M
3300029055	Human fecal microbial communities from mother in Denmark - 272_M	Host-Associated	Open in IMG/M
3300029092	Human fecal microbial communities from mother in Denmark - 10_M	Host-Associated	Open in IMG/M
3300029098	Human fecal microbial communities from infant at 12 months in Denmark - 10_12M	Host-Associated	Open in IMG/M
3300029112	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI021215-34	Host-Associated	Open in IMG/M
3300029114	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI021214-33	Host-Associated	Open in IMG/M
3300029128	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI012243-142	Host-Associated	Open in IMG/M
3300029131	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI019848-93	Host-Associated	Open in IMG/M
3300029135	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI012085-89	Host-Associated	Open in IMG/M
3300029136	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI012245-136	Host-Associated	Open in IMG/M
3300029188	Human fecal microbial communities from infant at 12 months in Denmark - 133_12M	Host-Associated	Open in IMG/M
3300029195	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI021314-123	Host-Associated	Open in IMG/M
3300029218	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI012062-30	Host-Associated	Open in IMG/M
3300029234	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI011691-140	Host-Associated	Open in IMG/M
3300029237	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI021246-166	Host-Associated	Open in IMG/M
3300029245	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI019817-21	Host-Associated	Open in IMG/M
3300029333	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 037_10_29_stool_2	Host-Associated	Open in IMG/M
3300029340	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 025_10_28_stool_1	Host-Associated	Open in IMG/M
3300029341	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 026_10_29_stool_2	Host-Associated	Open in IMG/M
3300029343	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 025_10_26_stool_1	Host-Associated	Open in IMG/M
3300029359	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 048_3_11_stool_2	Host-Associated	Open in IMG/M
3300029374	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 080_4_27_stool_1	Host-Associated	Open in IMG/M
3300029381	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 075_4_29_stool_2	Host-Associated	Open in IMG/M
3300029391	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 094_4_30_stool_2	Host-Associated	Open in IMG/M
3300029393	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 091_5_3_stool_2	Host-Associated	Open in IMG/M
3300029413	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 043_10_29_stool_2	Host-Associated	Open in IMG/M
3300029430	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 077_4_27_stool_1	Host-Associated	Open in IMG/M
3300029431	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 037_10_28_stool_1	Host-Associated	Open in IMG/M
3300029438	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 026_10_28_stool_1	Host-Associated	Open in IMG/M
3300029444	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 025_10_29_stool_1	Host-Associated	Open in IMG/M
3300029458	Human fecal microbial communities from Shanghai Jiao Tong University, China - RSZAXPI001919-113	Host-Associated	Open in IMG/M
3300029469	Human fecal microbial communities from Shanghai Jiao Tong University, China - RSZAXPI001926-13	Host-Associated	Open in IMG/M
3300029483	Human fecal microbial communities from Shanghai Jiao Tong University, China - RSZAXPI001857-108	Host-Associated	Open in IMG/M
3300029489	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 098_4_28_stool_1	Host-Associated	Open in IMG/M
3300029493	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 097_5_2_stool_1	Host-Associated	Open in IMG/M
3300029524	Human fecal microbial communities from Shanghai Jiao Tong University, China - RSZAXPI005361-17	Host-Associated	Open in IMG/M
3300029552	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35630	Host-Associated	Open in IMG/M
3300029557	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35705	Host-Associated	Open in IMG/M
3300029595	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_36057	Host-Associated	Open in IMG/M
3300029612	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35741	Host-Associated	Open in IMG/M
3300029614	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_36526	Host-Associated	Open in IMG/M
3300029620	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35980	Host-Associated	Open in IMG/M
3300029622	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35733	Host-Associated	Open in IMG/M
3300029653	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35653	Host-Associated	Open in IMG/M
3300029684	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37269	Host-Associated	Open in IMG/M
3300029708	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37210	Host-Associated	Open in IMG/M
3300029710	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_36051	Host-Associated	Open in IMG/M
3300029717	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_36667	Host-Associated	Open in IMG/M
3300029731	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37179	Host-Associated	Open in IMG/M
3300029733	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37172	Host-Associated	Open in IMG/M
3300029737	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37286	Host-Associated	Open in IMG/M
3300029746	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37136	Host-Associated	Open in IMG/M
3300029768	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37277	Host-Associated	Open in IMG/M
3300029785	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 037_10_31_stool_2	Host-Associated	Open in IMG/M
3300029815	Human fecal microbial communities from Shanghai, China - P010V6	Host-Associated	Open in IMG/M
3300029853	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37209	Host-Associated	Open in IMG/M
3300029855	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37270	Host-Associated	Open in IMG/M
3300029857	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37292	Host-Associated	Open in IMG/M
3300029860	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37337	Host-Associated	Open in IMG/M
3300029873	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37652	Host-Associated	Open in IMG/M
7000000040	Human stool microbial communities from NIH, USA - visit 2 of subject 763759525	Host-Associated	Open in IMG/M
7000000300	Human stool microbial communities from NIH, USA - visit 2, subject 159814214	Host-Associated	Open in IMG/M
7000000559	Human stool microbial communities from NIH, USA - visit 2, subject 763820215	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
EM039_10791692	3300000273	Human Fecal	MEGPRPDKFAFGVKLERVVDECRPVKGCIRKWLYIFANGQPELSTAEEVNVKNMEAFL*
EM293_10125172	3300000291	Human Fecal	MEGPRPDKFAFGVRIGRVVDGCRPAKGCIRKWLYIFANGQLKLSTAKEATVKNMEVSL*
Ga0051081_10074904	3300003140	Huma Fecal	LFAFGSRNGCVVDECRTAKGCIRKWLYIFANGQLKLSTAKEATVKNMEVSL*
Ga0099618_1175622	3300006298	Human	VNKMEGPRPDKFAFGVRIGRVVDECRPVKGCIRKWLYIFANGRLKLSTAEEVNVKSMEVSL*
Ga0101793_10076319	3300006739	Human	MEGPCPDKFAFSVKLERVVDECRPIKGCIKKRIYESANGQLELSTAEEVNVKNMEVSL*
Ga0101801_1011486	3300006747	Human	MEGPRPDKFAFGVRIGRVVDGCRPAKGCIRKWIHGFAYGQPELSTAEEVNVKNMEVSL*
Ga0102630_1051984	3300007105	Human	MEGPRPDKFAFGVRIGRVVDECRPAKGCIRKWIHGFAYGQPELSTAEEVNVKNMEVSL*
Ga0104061_1092034	3300007222	Human	MEGSRPDKFAFGVRIGRVVDGCRPIKGCIRKWIYGSANGQPELSTAEEATVKNMEVSL*
Ga0104788_1277673	3300007362	Human	ATERSCVSKMEGPRPDKFAFGVRIGRVVDGCRPIKGCIRKWIYGSANGQPELSTAEEVNVKNMEVSL*
Ga0105481_10301622	3300007524	Human	MEGPRPDKFAFSVKLERVVDGCRPAKGCVKKWLYVFANGQPELSTAEEANVKNMEASL*
Ga0104842_1069652	3300007530	Human	LFAFGSRNGCVVDECRTVKGCIRKWLYIFANGQLKLSTAEEVNVKNMEAFL*
Ga0105536_1338321	3300007657	Human	MEGPRPDKFASSEKLERVVDGCRPIKGCIKKRIYESANGRLKLSTAEEVNVKNMEASL*
Ga0105542_10107462	3300007664	Human	MEGPRPDKFAFGVKLERVVDECRPAKGCIRKWLYIFANGQPELSTAEEVNVKSMEAFL*
Ga0105758_10096125	3300007742	Human	MEGPRPDKFAFGVRIGRVVDECRLAKGCIRKWLYIFANGQLKLSTAEEVNVKNMEVFL*
Ga0105888_1039161	3300007793	Human	RSCVSKMEGPRPDKFAFGVRIGRVVDECRPAKGCIRKRIHGSANGQPELSTAEEVNVKNMEAFL*
Ga0114167_1084241	3300008058	Human	LFAFGSRNGCVVDECRTVKGCIRKWLYIFANGQLKLSTAEEVNVKNMEVSL*
Ga0114155_10394112	3300008096	Human	MEGSRPDKFAFGVRIGCVVDECRPAKGCIKKRIYESANGQPELSTAEEVNVKNMEAFV*
Ga0115185_1033441	3300008404	Human	MEGPRPDKFTFGVRIGRVVDGCRPAKGCIKKRIYGSANGQPELSAAEEVNVKNMEASL*
Ga0115078_10193713	3300008496	Human	MEGPRPDKFAFGVRIGRVVDECRPVKGCIRKWIHGFAYGQPELSTAGEVNVKNMEVSL*
Ga0111077_1136694	3300008571	Human	MEGPRPDKFAFSEKLERVVDGCRPIKGCIKKRIYESANGQLKLSTAEEVNVKNMEAFL*
Ga0111272_1005455	3300008620	Human	MEGPRPDKFAFGVRIGCVVGRCRPVKDCIRKWIHGFAYGQPELSTAEEVNVKNMEVSL*
Ga0113869_10022186	3300008705	Human	MEGPRPDKFAFGVRIGRVVDECRPAKGCIRKRIHGSANGQPELSTAEEVNVKNMEAFL*
Ga0169722_1214333	3300014543	Human Host-Associated	MEGLRPDKFAFSVKLERVVDGCRPAKGCVKKWLYVFANGQPELSTAEEVNVKNMEAFL*
Ga0134372_10001525	3300014566	Human Fecal	MEGPCPDKFAFGVRIGRVVDECRPVKNCITKRIYESANGQPELSTAEEVNVKNMEASL*
Ga0134372_10094921	3300014566	Human Fecal	SCVSKMEGPRPDKFAFGVRIGRVVDGCRPIKGCITKRIHGSANGQPELSTGREVEVKNWRLHL*
Ga0134488_1002203	3300014651	Human Fecal	MEGARPDKFAFSVKLERVVDGCRPIKGCIRKWIYGSANGQPELSTAKEANVKNVEVSL*
Ga0134375_1000394	3300014757	Human Fecal	MEGPRPDKFAFGVKLERVVDECRPVKGCIRKWLYIFANGQPELSTAEEVNVKNMEVSL*
Ga0134555_10237562	3300014776	Human Fecal	MEGPRPDKFAFSAKLERVVDECRPVKGCIRKWLYVFANEQQELSTAEEVNVKNMEAFL*
Ga0134458_1015354	3300014939	Human Fecal	MEGPRPDKFAFGVKLERVVDECRPIKGCIRKWLYVFANGQQELSAAEEANVKNMEAFL*
Ga0169857_1040392	3300014946	Human Host-Associated	MEGPRPDKFAFSVKLERVVDECRPIKGCIRKWLYIFANGQPELSTAEEVNVKNMEASL*
Ga0257052_1040215	3300023499	Human Gut	MILCRAKRALFASSVKLERVVDGCRPIKGCIRKWIHGFAYGQPELSTAEEVNVKNMEAFL
Ga0257040_1137911	3300023506	Human Gut	MEGPRPDKFAFGVRIGRVVGGCRPVKGCIKKWIHESANEQPELSTAEEVNVKNMEAFL
Ga0169625_10050434	3300029010	Human Host-Associated	MEGPRPDKFAFGVKIGRVVGGYRLIKGCIRKWLYIFANGRLKLSTAEEVNVKNMEVSL
Ga0169625_1005726	3300029010	Human Host-Associated	LFGFGSRNGCVVDECRTVKGCIRKWLYIFANGQLKLSTAEEVNVKNMEVSL
Ga0169650_1261781	3300029015	Human Host-Associated	MEGPRPDKFTFGVRIGRVVYECRTVKGCIRKWIYRSANGQPELSTAEEATVKNMEAFL
Ga0169709_1035452	3300029024	Human Host-Associated	MEGPRPDKFAFGVKLERVVDECRPAKGCIRKWLYIFANGQPELSTAEEVNVKSMEAFL
Ga0169626_10023724	3300029031	Human Host-Associated	MEGPRPDKFAFGVRIGRVVDECRTVKGCIRKWLYIFAYGQPELSTAEEVNVKSMEAFV
Ga0169607_10069224	3300029036	Human Host-Associated	MILCRAKRALFGFDVRSGCVVDECRPAKGCIRKWLYIFANGQLKLSTAEEVNVKNMEVSL
Ga0169607_10430401	3300029036	Human Host-Associated	MEGPRPDKFAFGVRIGRVVDGCRPAKGCVKKWLYVFANGQPELSTAEEVNVKNMEVSL
Ga0169694_1090993	3300029040	Human Host-Associated	MEGSRPDKFAFGVRIGRVVDGCRPAKGCVKKWLYGFANGQPELSTVKEANGKNMEAFV
Ga0169677_10078374	3300029044	Human Host-Associated	MEGPRPDKFAFGVRIGRVVDGCRPAKGCIRKWLYIFANGQLKLSTAKEATVKNMEVSL
Ga0169661_10012499	3300029045	Human Host-Associated	MEGPRPDKFAFGVRIGREVDGCRPAKGCVKKRIYESANGQPELSTAAEANVKNMEAFL
Ga0169629_1252861	3300029050	Human Host-Associated	MILCRAKRALFAFSVKLERVVDGCRPTKGCIKKWIHGSANGQPELSTAEEVNVKNMEAFL
Ga0169617_10360611	3300029055	Human Host-Associated	MEGPRPDKFAFGVRIGRVVDECRPVKGCIRKWIHGFAYGQPELSTAGEVNVKNMEVSL
Ga0169182_1087862	3300029092	Human Host-Associated	MEGPRPDKFAFGVRIGRVVDGCRPAKGCIKKRIYESANGQPELSTAAEANVKNMEAFL
Ga0169171_1143141	3300029098	Human Host-Associated	MEGPRPDKFASSVKLERVVDGCRPAKGCIKKRIYGSANGQPELSTAEEVNVKNMEAFL
Ga0168820_1051882	3300029112	Host-Associated	MEGPRLDKFGFGSRNGCVVGGCRPEKGYITKRIHGFADGMPKLSTAKEATVKNMEVFL
Ga0168819_1020771	3300029114	Host-Associated	LCRAKRALFQFGSRNGCVVGGCRPAKGYIKKWVHESANGQPELSTAEEVNVKNMEAFL
Ga0168745_1277722	3300029128	Host-Associated	MEGPRLDKFRFGSRNGCVVGGCGPIKGCIRKWIYGFANGQPELSTAEEVNVKNMGAFL
Ga0168790_1448001	3300029131	Host-Associated	MILRRAKRALFGFDVKFGCVVDGCRPAKGCITKRIHGSANGQLKLSTAEEVNVKNMEAFL
Ga0168740_1058941	3300029135	Host-Associated	ERSCVSKMEGPRLDKFRFGSRNGCVVGGCGPIKGCIRKWIYGFANGQPELSTAEEVNVKNMGAFL
Ga0168747_1028684	3300029136	Host-Associated	MEGPRLDKFRFGSRNGCVVGGCGPIKGCIRKWIYGFANGQPELSTAEEVNVKNMEVFL
Ga0169196_10020253	3300029188	Human Host-Associated	MEGARPDKFAFSVKLERVVDGCRPIKGCIRKWIYGSANGQPELSTAKEANVKNVEVSL
Ga0167502_1065165	3300029195	Host-Associated	SCVSKMEGPRPDKFAFGVRIGRVVDGCRPVRGCIRKRIYRSANGQLKLSTVKEANVKNMEVF
Ga0168718_1021291	3300029218	Host-Associated	CSSFGVRIGRVVDGCRPAKGCITKRLYVFANGQLKLSTAEEVNVKNMEVFL
Ga0168698_1016507	3300029234	Host-Associated	LFQFGSRNGCVVGGCRPAKGYIKKWVHESANGQPELSTAEEVNVKNMEAFL
Ga0167477_1021945	3300029237	Host-Associated	MILCRAKRALFQFGSRNGCVVGGCRPAKGYIKKWVHESANGQPELSTAEEVNVKNMEAFL
Ga0168762_1184972	3300029245	Host-Associated	MEGPRPDKFAFGVRNGRVVDGCRPVENCIRKWIYESANGQLELSTTEEVNVKNMEVFL
Ga0243760_10262312	3300029333	Human Feces	MEGPRPDKFAFGVRIGRVVDECRPVKGCIRKWLYIFANGRLKLSTAEEVNVKNMEVSL
Ga0243760_1152893	3300029333	Human Feces	MEGPRPDKFAFGVRIGRVVDGCRPIKGCIRKWIYGSANGQPELSTAEEVNVKNMEAFL
Ga0243727_10035273	3300029340	Human Feces	LCRAKRVLFGFGSRNGCVVGGCRLIKGCIRKWIYESANGQQELSTAEEVNVKNMEVFL
Ga0243736_10407351	3300029341	Human Feces	SCVSKMEGPRPDKFAFGVRIGRVVDGCRPIKGCITKRIHGSANGQPELSTGREVEVKNWRLHL
Ga0243725_10088731	3300029343	Human Feces	RCRILCRAKRALFGFDVKFGCVVDGCRLIKGCIRKWIYGFANGQPELSTAEEVNVKNMEAFL
Ga0243835_100122814	3300029359	Human Feces	MEGPRPDKFAFGVKLERVVDECRPVKGCIRKWLYIFANGQPELSTAEEVNVKSMEAFL
Ga0243945_10028014	3300029374	Human Feces	MEGARPDKFAFSVKLERVVDGCRPIKGCIRKWIYRSANGQPELSTAEEANVKNMEVFL
Ga0243902_10275442	3300029381	Human Feces	MEGPRPDKFAFGVRIGRVVDGCRPAKGCITKRIHRSANGQPELSTAEEVNVKNMEAFL
Ga0243992_1097452	3300029391	Human Feces	MEGPRPDKFAFGVRIGRVVDGCRPAKGCITKRIHRSANGQLKLSTAEEANVKNMEASL
Ga0243986_10043916	3300029393	Human Feces	MILCRAKRALFGFDVKFGCVVDGCRPAKGCVTKRLYVFANGQLKLSTAEEVNVKNMEVSL
Ga0243792_10066392	3300029413	Human Feces	LCRAKRALFAFSVKLERVVDGCRPAKGCIRKWIHGFAYGQPELSTAEEINVKNMEVSL
Ga0243922_10142413	3300029430	Human Feces	MILCRAKRALFQFGSRNGCVVGGCRPAKGYIKKWVHESANGQPELSTAEEVNVKNMEVFL
Ga0243758_100403813	3300029431	Human Feces	CVSKMEGPRPDKFAFGVRIGRVVDGCRPIKGCITKRIHGSANGQPELSAGREVEVKNWRLHL
Ga0243733_10125015	3300029438	Human Feces	MEGPRPDKFASSVKLERVVDGCRPAKGYIKKWVHESANGQPELSTTEEVNVKNMEAFL
Ga0243728_100302311	3300029444	Human Feces	VLFGFGSRNGCVVGGCRLIKGCIRKWIYESANGQQELSTAEEVNVKNMEVFL
Ga0243728_10146072	3300029444	Human Feces	LCRAKRALFGFDVKFGCVVDGCRLIKGCIRKWIYGFANGQPELSTAEEVNVKNMEAFL
Ga0244161_10071511	3300029458	Human Fecal	MEGPRPDKFAFGVRIGRVVDGCRPVRGCIRKRIYRSANGQLKLSTVKEANVKNMEVF
Ga0244168_1033473	3300029469	Human Fecal	LFRFGSRNGCVVGGCRLIKGCIRKWIHGFAYGQPELSTAKEANVKKMEVIL
Ga0244102_1046382	3300029483	Human Fecal	MEGPRPDKFAFGVRIGRVVDGCRPVKGCITKWIHGSANGQPELFTTEEVNAKNMEVFL
Ga0244014_100044313	3300029489	Human Feces	MILCRAKRALFGFGSRNGCVVGGYRPIKGCIKKRIYESATGQPELSTAEEVNVKNMEVF
Ga0244010_10052692	3300029493	Human Feces	MEGPRPDKFAFGVRIGRVVDECRPAKGCIRKRIHGSANGQPELSTAEEVNVKNMEAFL
Ga0244794_1359303	3300029524	Human Fecal	LCRAKRALFQFGSRNGCVVGGCRPVKGCIRKWLYIFANGQLKLSTAEEVNVKNMEAFL
Ga0245113_1115523	3300029552	Human Fecal	MEGPRPDKFAFGVRIGRVVDECRTVKGCIRKWLYIFANGQLKLSTAEEVNVKNMEAFL
Ga0245120_1023472	3300029557	Human Fecal	LFGFDVKFGCVVDECRPAKGCVRKWLYVFANGQPELSTAEEANVKNMEVSL
Ga0245120_1159291	3300029557	Human Fecal	MEGPRPDKFAFGVRIGRVVDECRPVKGCIRKWLYIFANGRLKLSTAEEVNVKSMEVSL
Ga0245140_10130311	3300029595	Human Fecal	MILRRAKRALFGFDVKFGCVVDGCRPAKGCVKKWLYVFTNGQPELFTTEEVTVKNMEVSL
Ga0245127_1252332	3300029612	Human Fecal	XQFYAKRCRILCRAKRALFQFGSRNGCVVGGCRPAKGYIKKWVHESANGQPELSTAEEVNVKNMEAFL
Ga0245155_1161134	3300029614	Human Fecal	MEGPCPDKFAFGVRIGCVVDGCGSAKGCIRKWIHGFANGQPELSTAEEVNVKNIEASL
Ga0245130_1160263	3300029620	Human Fecal	MEGPRPDKFAFSVKLERVVDGCRPAKGCVKKWLYVFANGQPELSTAEEANVKNMEASL
Ga0245124_10017818	3300029622	Human Fecal	MEGPRPDKFAFGVRIGRVVDGCRLIKGCIRKWLYVFANGQLKLSTAEEVNVKNMEVSL
Ga0245224_1160771	3300029653	Human Fecal	MEGPRPDKFAFGVKIGRVVDGCRPVKGCIRKWLYIFANEQLKLSTAEEVNVKNMEVSL
Ga0245194_10088533	3300029684	Human Fecal	MEGPRPDKFAFGVRIGRVVDECRPAKGCIKKWIHGSANEQPELSTAKEANGKNMEVFL
Ga0245189_1107293	3300029708	Human Fecal	MILRRAKRALFGFDVKFGCVVDGCRPAKGCVKKWLYIFANGQLKLSTAEEVNVKNMEVSL
Ga0245189_1153304	3300029708	Human Fecal	GFDVKFGCVVDGCRPAKGCVKKWLYVFTNGQPELFTTEEVTVKNMEVSL
Ga0245233_1188233	3300029710	Human Fecal	MEGPRPDKFAFSVKLERVVDGCRPAKGCIRKWFYVFANGQLKLSTAEEVNVKNMEVSL
Ga0245160_10639603	3300029717	Human Fecal	ATERSCVSKMEGPRPDKFAFGVRIGRVVDECRPAKGCIKKWIHGSANEQPELSTAEEVNVKNMEAFL
Ga0245178_1147263	3300029731	Human Fecal	MEGPRPDKFAFGVKIGRVVDGCRPAKGCIRKWIHGFAYGQPELSTAEEVNVKNMEVSL
Ga0245176_1024006	3300029733	Human Fecal	MEGPRPDKFAFGVRIGRVVDGCRPAKGCIRKWLYIFANGQLKLSTAKEATVKNIEVSL
Ga0245199_10110014	3300029737	Human Fecal	MEGPRPDKFAFGVRIGRVVDECRPAKGCIKKWIHGSANEQPELSTAEEVNVKNMEVFL
Ga0245173_1111802	3300029746	Human Fecal	MEGPRPDKFAFGVRIGRVVDECRPAKGSIKKWVHGFANGQPELSTAEEVNVKNMEVFL
Ga0245196_1049145	3300029768	Human Fecal	MQDFVQSKRALFQFGSRNGCVVGGCRPAKDCIKKWLYGSANGQLKLSTAEEVNVKNMEVF
Ga0243763_10625533	3300029785	Human Feces	AFSVKLERVVDGCRPVKGCIRKWIYRSANGQPELSTAEEATVKNMEAFL
Ga0244882_10044666	3300029815	Human Fecal	MILCRAKRALFAFSVKLERVVDGCRPAKGCIRKRIYESANGQPELSTAKETTVKNMEVFL
Ga0245292_1036122	3300029853	Human Fecal	MEGPRPDKFAFGVRIGRVVDECRPAKGCIKKWIHGSANEQPELSTAEEVNVKNMEAFL
Ga0245295_10436141	3300029855	Human Fecal	LCRAKRALFGFDVKFGCVVDECRPAKGCIRKWLYIFANGQLKLSTAEEVNVKNMEVFL
Ga0245297_10100615	3300029857	Human Fecal	MEGPRPDKFAFGVRIGRVVDGCRPAKGCITKRIHRSANGQPELSTAEEANVKNMEAFL
Ga0245305_10044951	3300029860	Human Fecal	FYAKRCRILCRAKRALFAFSVKLERVVDGCRPAKGCVKKWLYGFANGQPELSTVEEINVKNMEVSL
Ga0245321_10217812	3300029873	Human Fecal	MILCRAKRALFGFDVRSGCVVDECRPAKGCIRKWLYIFANGQLKLSTAEEVNVKNMEAFL
SRS043411_WUGC_scaffold_25921__gene_48295	7000000040	Human	MEGPRPDKFAFGVKLERVVDECRPVKGCIRKWLYIFANGQPKLSTAEEVNVKNMEAFL
SRS043701_LANL_scaffold_10863__gene_20961	7000000300	Human	CRAKRALFGFDVRSGCVVDECRPAKGCIRKWLYIFANGQLKLSTAEEVNVKNMEVSL
SRS058723_Baylor_scaffold_9589__gene_21715	7000000559	Human	MILCRAKRALFAFSVKLECVVDECRPVKGCIRKWIHGFAYGQPELSTAEEVNVKNMEAIL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089053

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences