Sample 3300029552

Basic Information
IMG/M Taxon OID	3300029552 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0133139 \| Gp0283749 \| Ga0245113
Sample Name	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35630
Sequencing Status	Permanent Draft
Sequencing Center	Beijing Genomics Institute (BGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

3300029552 Open in IMG/M

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0133139 | Gp0283749 | Ga0245113

Sample Name

Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35630

Sequencing Status

Permanent Draft

Sequencing Center

Beijing Genomics Institute (BGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	140840826
Sequencing Scaffolds	16
Novel Protein Genes	20
Associated Families	19

Dataset Contents

Total Genome Size

140840826

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1
Not Available	6
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Podoviridae sp. ct1h53	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → Alistipes timonensis	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	2
All Organisms → cellular organisms → Bacteria	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → Viruses → Duplodnaviria → Heunggongvirae

Not Available

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Podoviridae sp. ct1h53

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → Alistipes timonensis

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii

All Organisms → cellular organisms → Bacteria

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae

Ecosystem Assignment (GOLD)
Name	Human Fecal Microbial Communities From Twins In The Twinsuk Registry In London, United Kingdom
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Twins In The Twinsuk Registry In London, United Kingdom

Ecosystem Assignment (GOLD)

Name

Human Fecal Microbial Communities From Twins In The Twinsuk Registry In London, United Kingdom

Type

Host-Associated

Taxonomy

Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Twins In The Twinsuk Registry In London, United Kingdom

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal distal gut

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

Unclassified

Earth Microbiome Project Ontology (EMPO)

Host-associated → Animal → Animal distal gut

Location Information
Location	United Kingdom: London
Coordinates	Lat. (^o)	51.5	Long. (^o)	-0.12	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

United Kingdom: London

Coordinates

Lat. (^o)

51.5

Long. (^o)

-0.12

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F042095	Metagenome	159	N
F042936	Metagenome	157	N
F044554	Metagenome	154	N
F047126	Metagenome	150	N
F055775	Metagenome	138	N
F057001	Metagenome	137	Y
F058555	Metagenome	135	N
F064725	Metagenome	128	N
F067720	Metagenome	125	Y
F074964	Metagenome	119	N
F085718	Metagenome	111	N
F087336	Metagenome	110	N
F088914	Metagenome	109	N
F089053	Metagenome	109	Y
F089054	Metagenome	109	N
F090484	Metagenome	108	N
F092227	Metagenome	107	N
F099406	Metagenome	103	N
F105374	Metagenome	100	N

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0245113_100081	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	154864	Open in IMG/M
Ga0245113_100212	Not Available	87139	Open in IMG/M
Ga0245113_100330	Not Available	60327	Open in IMG/M
Ga0245113_100341	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	58292	Open in IMG/M
Ga0245113_100459	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Podoviridae sp. ct1h53	43747	Open in IMG/M
Ga0245113_100570	Not Available	35333	Open in IMG/M
Ga0245113_100583	Not Available	34077	Open in IMG/M
Ga0245113_101422	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → Alistipes timonensis	11631	Open in IMG/M
Ga0245113_103374	Not Available	5092	Open in IMG/M
Ga0245113_111552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	1782	Open in IMG/M
Ga0245113_113931	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M
Ga0245113_121075	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
Ga0245113_121335	Not Available	965	Open in IMG/M
Ga0245113_121686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	948	Open in IMG/M
Ga0245113_126967	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
Ga0245113_136004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	543	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0245113_100081	Ga0245113_100081135	F085718	MVIEFDFEIYKNGDYDKVYLRNGKEPRVLCDNGKGDRPIVVMVEDDNANDYIILRYNETGRRNINGQSSLDLMLSVKERKPELWVVVISYMDNKDKRQKMVLPNFFSRNIGGNIYLQGSSKSNVSYYVGRLEEDGCFDELCEKIRVKRDRIYNMEIISLSDDKATV
Ga0245113_100081	Ga0245113_100081149	F057001	MISKEINKVQNEIKKSSEKTLTGAIKAWCQLFKSSKEVNEILKENEIKVDKSIVPALVNLAKDKEVVIQLCKEILPRVNNTFCAYKEVEREYYDKNDQDKNKKLKMNEIEDIAILGSSHKRFGYNEPIEFDFGIYYETFNGADKRIIKCAVPIKRYTFNLIAKCVTYYLTHPRNDR
Ga0245113_100081	Ga0245113_100081175	F058555	MKLVYSQKIKSTMGTKIGILHIMKSNFDKILTERYTPRNIQAKKDELGCVKLPAGSLICPVDFKPVTNKEGKKVTAIKYSLKHEEYHGSGIQISDECKMAMIYLIIINVFKHVFLRNRMHGGNRDQIEINTNDFIDILSDGCAYFCYRHVLRDSHEDMNYQLISLKAWAEGEIMIALSDIIKYKHRASKTPRIKDMFVKKGESVYTCLDKNLDSNTRRWMANKSRKLNRVKMLSKIIFSARNRNINKIYKVTKKRTVKFNVSYLMDRLNIKLSKEGMMLISQRTVYRMIKEVLSMCCKTISDLYDEVKKNNGIVNTKDRKNVTIGHLRLSYRGKIMHIIIAEDFIKDVFLGVKGSEMSKA
Ga0245113_100081	Ga0245113_100081195	F042095	MAKTLYKYEASSNKFVWFTTWDRALRNYYTDDYNYVPDPVVGNPYNTFVEFRSRKPGMANVDWGDGIKEQFPMTKVQGQDNYRIIFRSLAIQHRKNPNTTWWFRKEDGSQYVPIDNHAYADGRKDVQRAVSIDFTCDIYYANIQVCKMTSFPIVDIPGLEFLIVSHTLYVNDGIPVDKLSRSKKLIYIDLQNIGQRMTVIPEAITSKTEVYYLNMFNMLDLRDIESSGIRNIKNMKNLQSLELSSCYLDRYIKEFNDLPKLKTLNITPGPSDMWNYFDINTLPFFEVDKINPNITDFYFLNDWVSGERRTGWNDDNMSGRGLEHLTGFIAANSNSLRMDKLPDYIYEMRAITRFDVNASTHSQKRSDDFVNSFYDLVVGWDQITMTSVAKDGKRNQFYSLSVSMYNAIYPTENQRPSGTEQAPEGFVKGSSNGSPATPMEKIYVLKNNYAQRWTIKPE
Ga0245113_100081	Ga0245113_1000818	F064725	MTIKGLLAEIKADLHKYDDSGAIDTSSVYRWAEIALKRFGGVIAVMSEAVVKTSNKQAVLPSDFFDMLDAYRCEPLVCEIPGGDKAKADLQHEIGWVERTERGFRWNSCTECCKEEFEKTITERIYIGSHEVRFHYHHPVRLSIGRGLRRDCAADKYRDKYDWDNYDITISGNTMYTGFDGFIYIIYRATPKDDDGLPYIPETALGYLEDYVETYIKMKIFENAAVNGLIQGAGDAYKLYAQQEPGKFARAMKELKMSMITLNDYRELAEDNRRRMLSYERMWPNAFDKYIKMV
Ga0245113_100212	Ga0245113_1002121	F089054	MLTKGKFLVSFEVPGHTKEYTEGFTEEMVIPYRTEELRPYLRYPNQEINKNHLHSKHIRLQIREILQIPLRDITIIDIISLP
Ga0245113_100330	Ga0245113_10033054	F099406	MAEIGYNSKFEGQEVDSRLENVVQAAPGTGSESGKGGLIPAPPAGSQDGSKTLLSNMTWGDHVTKQYIDDAVSAAGWKKQIVSKLPTVEEAKDNVMYLVKDDVASTETKNVYNEYILVTEEGGTKVLESLGMVSTGVDSNYLDLSMFSGDSGTLDEASFGKVLDAYNNKITLGKLASNYYSLDYFLEGRDFEGAFELKIVFVSLSDTNTGEGVSESDIEIYAGTYTVTQDKNYKALSNMVTLSNTMMSYLRFMSKAPRVVTTLANLPKDTHNIIANVASATNLSMTVSSEYVGREWQVRVNNTTGTDFTQPLPSSGQFQCMSGYSVTVPRKSFIELSIWYIDDKLVIRAGEQAFAERIGYALCK
Ga0245113_100341	Ga0245113_1003412	F067720	MASITYEHLGDVTEMFAAQEQFRGITKMVCARFRDLTKTYHFGNVNKLVTFCHQFAVLGNMVRNAGQLPQPFWLGAACGGGSCSAARCAART
Ga0245113_100459	Ga0245113_10045977	F074964	MITKKNINKLQNAVIKENAANLVGAVKLYNALFANGADLKAICKALEIPAEYAAKVASLAKDKKRLVAVCSQMLPKVGDTFVKFTLYSKIYKDSKVNKEKGIENKEVKNIAYGEEYKPFGFASPEPLEGKNSAKWLTRETDEYRATYVATRIATYSIRTIAKCVSEYLAHESNQQ
Ga0245113_100570	Ga0245113_10057036	F055775	MAQIAQQDNLVIEVTTTAAKMDDGTKKKLIECIEGGTITDVILVTKEVEKSISHARVVSWWVATTENSQKYTINIINANSGAIEKIALN
Ga0245113_100583	Ga0245113_10058320	F090484	MKLQLGRNINISLRLLEQWSDDSLFMELYALYCMIKISRRDSRIRFKNKKDLLHKLGIGYSKFKNMTGHPMFDELFRMTNSTFVARRYRVNGVQLTLGCGKVNIPKNRILIKIKKNEITNHEKVLDRIREAMFVNLVRNNESVLNSGETNSQAEVVDGSHSYYGLIDSTISNKTIALYLNVGLTKAKEIIGMAIQDKLVKRFENIQFITYVDNPRAYIEANEHNYPIGKLIPVYRHGAVFWQIANTWTLYKKGATNRWYFGEKDIEKGEKEKVSKKDDFNFFLKDNTHILRFLNAEEVVSEDGEILGIDRKKTKEEEARSLASVMAKEAHKDFWDGYERSTQNQIIRKYYRAIIAEDKKRRMDMFLNRLKQSYDKVSGWSKEKVATVKAGMADAEACCAEVGTSVAGVCGRVSRRMKSYNNTDTDKKAGFNEVRDMYAEFAGEMAKAVGSVSEDIYTYVKAEQFKEKIGNMDISIQSLPNISITVDNDKELDGESIFKDIPFEELSFYNDTYLYPSSQYSSL
Ga0245113_101422	Ga0245113_1014229	F105374	MKKRVALLVALCIWKVVAAQTPYGEMPERFRPDTLPCRLGGGVCFGMDGLDAAILRGGGASSCRDPRVVFVAGDTLITFISVAGVADTALGDPVCRFYGRNVARVVSRTRRMTGGRMGAADNDFPDDPDFAELQGVVIENQRYPWESYAAGDSAYRLPVARSLVGGKEDPLLGSDMRRRYVRLLTEVSVELKAGGTRPFVHVVYLLPDP
Ga0245113_103374	Ga0245113_1033747	F047126	VYLKTKKMTNISQTQAGFKSKSLGILCGFQGLLTQNPAALVETDDIFDVSDTPYGFSGLNTLRAAGVPNPPPPFAQRFIACFCSQTAAASQSKSAYILSSLESPCILCSLLRYFHILSKKLQKTC
Ga0245113_111552	Ga0245113_1115523	F089053	MEGPRPDKFAFGVRIGRVVDECRTVKGCIRKWLYIFANGQLKLSTAEEVNVKNMEAFL
Ga0245113_113931	Ga0245113_1139311	F042936	MGRGGGKGRVWKTKEGIMKTSGIVDRGEDTIRNFEKVEQEGALTQPYLGKVYFRSRLRGK
Ga0245113_121075	Ga0245113_1210751	F087336	VAELEQVPKAFRAAGNQRRATAKERIKDDAIGHGRVSDRILAEIEDNHMRERDTKIGLAEQRQVAFLEIAFQILPLKSKQKRAPQEVNSQSALSESNQLISP
Ga0245113_121335	Ga0245113_1213352	F044554	SIARLFPCRTEIARCLTLDFAISRYLFLSFSFSFRTNFDQALFSSLLFVSDTRAKSILFLLFENEIAHLQGQYRFDSHRYCFSAFLVL
Ga0245113_121686	Ga0245113_1216862	F088914	VGRILPVCSGFFVFWSRKEGANYQISVKSFSNLDSYDIIQLYIMTELTDGRVSDRLFSVPYTPKENIKNPGKFIVFSAWYAAKALEMNVK
Ga0245113_126967	Ga0245113_1269671	F089054	MLTSGRFLVSFEVPGPLPGTTEGFCEEMNVVYRTEELNTYLRYPKQEINPWDKHSTYIRLKLREILKVNLRDITIIDIISLP
Ga0245113_136004	Ga0245113_1360042	F092227	MNEQKRKRVLRIGXXXXXXXXXFVLSLLGSILMMLLL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300029552: Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35630

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences