Metagenome / Metatranscriptome Family F060086

Basic Information
Family ID	F060086
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	45 residues
Representative Sequence	DPFELDSNLLLSSGRHGEDRKRQYLYDHETPLLDDLADLLY
Number of Associated Samples	119
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	76.69 %
% of genes from short scaffolds (< 2000 bps)	80.45 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Most Common Taxonomy
Group	Unclassified (72.932 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (15.790 % of family members)
Environment Ontology (ENVO)	Unclassified (30.075 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (42.857 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.58% β-sheet: 0.00% Coil/Unstructured: 59.42%
Feature Viewer

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Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00428	Ribosomal_60s	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG2058	Ribosomal protein L12E/L44/L45/RPP1/RPP2	Translation, ribosomal structure and biogenesis [J]	0.75

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.93 %
All Organisms	root	All Organisms	27.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.93 %
cellular organisms	root	All Organisms → cellular organisms	27.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.93 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	27.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.93 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	2.26 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.93 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	2.26 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.93 %
Oomycota	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota	2.26 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.93 %
Albuginales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Albuginales	2.26 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.93 %
Albuginaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Albuginales → Albuginaceae	2.26 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.93 %
Albugo	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Albuginales → Albuginaceae → Albugo	2.26 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.93 %
Albugo candida	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Albuginales → Albuginaceae → Albugo → Albugo candida	2.26 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001548\|JGI12189J15679_108889	Not Available	782	Open in IMG/M
3300002650\|Ga0005470J37258_100346	All Organisms → cellular organisms → Eukaryota	1039	Open in IMG/M
3300002658\|Ga0005478J37266_100121	All Organisms → cellular organisms → Eukaryota	1103	Open in IMG/M
3300003680\|Ga0003069J53074_1020720	Not Available	582	Open in IMG/M
3300003717\|Ga0006766_109410	Not Available	607	Open in IMG/M
3300003725\|Ga0008087_101525	Not Available	504	Open in IMG/M
3300004954\|Ga0066626_157928	Not Available	1151	Open in IMG/M
3300004961\|Ga0072333_1004598	Not Available	679	Open in IMG/M
3300006227\|Ga0082386_105279	Not Available	661	Open in IMG/M
3300006227\|Ga0082386_105342	Not Available	588	Open in IMG/M
3300006361\|Ga0079055_103443	Not Available	1151	Open in IMG/M
3300006702\|Ga0031688_1007239	All Organisms → cellular organisms → Eukaryota	1212	Open in IMG/M
3300006702\|Ga0031688_1013957	Not Available	572	Open in IMG/M
3300006702\|Ga0031688_1019312	All Organisms → cellular organisms → Eukaryota	692	Open in IMG/M
3300006718\|Ga0005504_1003167	Not Available	1154	Open in IMG/M
3300006900\|Ga0066376_10508464	Not Available	679	Open in IMG/M
3300008013\|Ga0099809_11077740	Not Available	616	Open in IMG/M
3300008016\|Ga0099818_1102072	Not Available	598	Open in IMG/M
3300008031\|Ga0099817_1123737	Not Available	576	Open in IMG/M
3300008035\|Ga0099808_1146027	Not Available	650	Open in IMG/M
3300008038\|Ga0099805_1300650	Not Available	1098	Open in IMG/M
3300008041\|Ga0099806_1559679	Not Available	520	Open in IMG/M
3300008043\|Ga0099807_1018159	Not Available	686	Open in IMG/M
3300008044\|Ga0099804_1113073	Not Available	652	Open in IMG/M
3300008044\|Ga0099804_1254251	Not Available	601	Open in IMG/M
3300008568\|Ga0103784_1005942	Not Available	531	Open in IMG/M
3300008651\|Ga0103623_1006000	All Organisms → cellular organisms → Eukaryota	671	Open in IMG/M
3300008724\|Ga0103785_103089	Not Available	792	Open in IMG/M
3300008872\|Ga0103385_100231	Not Available	730	Open in IMG/M
3300008874\|Ga0103387_100229	All Organisms → cellular organisms → Eukaryota	626	Open in IMG/M
3300009348\|Ga0103786_1007822	All Organisms → cellular organisms → Eukaryota	735	Open in IMG/M
3300009348\|Ga0103786_1014098	All Organisms → cellular organisms → Eukaryota	543	Open in IMG/M
3300009349\|Ga0103787_1008969	All Organisms → cellular organisms → Eukaryota	687	Open in IMG/M
3300009355\|Ga0103788_1003506	All Organisms → cellular organisms → Eukaryota	870	Open in IMG/M
3300009724\|Ga0123380_116945	All Organisms → cellular organisms → Eukaryota	569	Open in IMG/M
3300010074\|Ga0127439_144150	Not Available	843	Open in IMG/M
3300010083\|Ga0127478_1056667	Not Available	923	Open in IMG/M
3300010152\|Ga0126318_10260089	All Organisms → cellular organisms → Eukaryota	705	Open in IMG/M
3300011120\|Ga0150983_12565206	Not Available	504	Open in IMG/M
3300011293\|Ga0138376_192351	Not Available	647	Open in IMG/M
3300011293\|Ga0138376_195326	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Albuginales → Albuginaceae → Albugo → Albugo candida	956	Open in IMG/M
3300011298\|Ga0138362_1056593	All Organisms → cellular organisms → Eukaryota	764	Open in IMG/M
3300011314\|Ga0138382_1102135	Not Available	728	Open in IMG/M
3300011314\|Ga0138382_1125167	Not Available	877	Open in IMG/M
3300011316\|Ga0138399_1045884	Not Available	827	Open in IMG/M
3300011316\|Ga0138399_1123677	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Albuginales → Albuginaceae → Albugo → Albugo candida	922	Open in IMG/M
3300012212\|Ga0150985_109239618	Not Available	553	Open in IMG/M
3300012375\|Ga0134034_1121211	All Organisms → cellular organisms → Eukaryota	823	Open in IMG/M
3300012413\|Ga0138258_1684375	All Organisms → cellular organisms → Eukaryota	975	Open in IMG/M
3300012469\|Ga0150984_113971810	Not Available	1241	Open in IMG/M
3300012470\|Ga0129329_1099683	All Organisms → cellular organisms → Eukaryota	755	Open in IMG/M
3300012472\|Ga0129328_1106723	All Organisms → cellular organisms → Eukaryota	979	Open in IMG/M
3300012524\|Ga0129331_1050648	All Organisms → cellular organisms → Eukaryota	662	Open in IMG/M
3300012524\|Ga0129331_1497326	All Organisms → cellular organisms → Eukaryota	749	Open in IMG/M
3300012969\|Ga0129332_1223419	All Organisms → cellular organisms → Eukaryota	596	Open in IMG/M
3300016726\|Ga0182045_1089209	All Organisms → cellular organisms → Eukaryota	899	Open in IMG/M
3300016733\|Ga0182042_1026507	All Organisms → cellular organisms → Eukaryota	991	Open in IMG/M
3300016735\|Ga0182074_1220273	Not Available	947	Open in IMG/M
3300016747\|Ga0182078_10699087	All Organisms → cellular organisms → Eukaryota	615	Open in IMG/M
3300018605\|Ga0193339_1008065	Not Available	947	Open in IMG/M
3300018845\|Ga0193042_1073487	Not Available	975	Open in IMG/M
3300018874\|Ga0192977_1111883	Not Available	536	Open in IMG/M
3300018952\|Ga0192852_10265024	Not Available	536	Open in IMG/M
3300018971\|Ga0193559_10096534	Not Available	966	Open in IMG/M
3300018974\|Ga0192873_10395687	Not Available	557	Open in IMG/M
3300018979\|Ga0193540_10222493	Not Available	513	Open in IMG/M
3300018982\|Ga0192947_10270211	Not Available	540	Open in IMG/M
3300019000\|Ga0192953_10127510	Not Available	629	Open in IMG/M
3300019010\|Ga0193044_10277240	Not Available	508	Open in IMG/M
3300019012\|Ga0193043_10150912	Not Available	980	Open in IMG/M
3300019021\|Ga0192982_10091692	Not Available	999	Open in IMG/M
3300019043\|Ga0192998_10165505	Not Available	636	Open in IMG/M
3300019254\|Ga0184641_1443421	Not Available	725	Open in IMG/M
3300019267\|Ga0182069_1196589	Not Available	729	Open in IMG/M
3300019269\|Ga0184644_1177628	Not Available	781	Open in IMG/M
3300019274\|Ga0182073_1437395	Not Available	780	Open in IMG/M
3300019279\|Ga0184642_1233371	Not Available	1056	Open in IMG/M
3300021266\|Ga0210348_152456	Not Available	589	Open in IMG/M
3300021273\|Ga0210340_1070261	Not Available	691	Open in IMG/M
3300021276\|Ga0210354_1125065	All Organisms → cellular organisms → Eukaryota	715	Open in IMG/M
3300021278\|Ga0210332_117227	Not Available	609	Open in IMG/M
3300021302\|Ga0210328_1117087	Not Available	670	Open in IMG/M
3300021304\|Ga0210331_1095809	Not Available	650	Open in IMG/M
3300021314\|Ga0210370_1108763	Not Available	738	Open in IMG/M
3300021337\|Ga0210341_1357093	Not Available	756	Open in IMG/M
3300021846\|Ga0210359_154644	All Organisms → cellular organisms → Eukaryota	940	Open in IMG/M
3300021950\|Ga0063101_1075719	Not Available	1218	Open in IMG/M
3300022166\|Ga0213932_1074617	Not Available	505	Open in IMG/M
3300022595\|Ga0215184_1117977	Not Available	610	Open in IMG/M
3300027264\|Ga0255580_1074290	Not Available	999	Open in IMG/M
3300029644\|Ga0206083_100658	Not Available	842	Open in IMG/M
3300030699\|Ga0307398_10231608	All Organisms → cellular organisms → Eukaryota	988	Open in IMG/M
3300030789\|Ga0102766_10909255	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Albuginales → Albuginaceae → Albugo → Albugo candida	771	Open in IMG/M
3300030831\|Ga0308152_108404	Not Available	615	Open in IMG/M
3300030904\|Ga0308198_1012423	Not Available	1049	Open in IMG/M
3300030987\|Ga0308155_1003382	Not Available	1057	Open in IMG/M
3300030993\|Ga0308190_1015957	Not Available	1171	Open in IMG/M
3300031097\|Ga0308188_1004533	Not Available	1047	Open in IMG/M
3300031122\|Ga0170822_12721893	All Organisms → cellular organisms → Eukaryota → Opisthokonta	670	Open in IMG/M
3300031496\|Ga0308130_1029799	All Organisms → cellular organisms → Eukaryota	804	Open in IMG/M
3300031559\|Ga0308135_1042818	All Organisms → cellular organisms → Eukaryota	820	Open in IMG/M
3300031581\|Ga0308125_1032182	Not Available	908	Open in IMG/M
3300031734\|Ga0307397_10158196	All Organisms → cellular organisms → Eukaryota	982	Open in IMG/M
3300032127\|Ga0315305_1070010	All Organisms → cellular organisms → Eukaryota	923	Open in IMG/M
3300032161\|Ga0315301_1018992	All Organisms → cellular organisms → Eukaryota	995	Open in IMG/M
3300033527\|Ga0316586_1065979	Not Available	662	Open in IMG/M
3300033527\|Ga0316586_1122603	All Organisms → cellular organisms → Eukaryota	508	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.97%
Host-Associated	Host-Associated	12.03%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	63.16%
Terrestrial	Environmental → Terrestrial	24.81%
Invertebrates	Host-Associated → Invertebrates	8.27%
Plants	Host-Associated → Plants	3.76%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	51.13%
Soil	Environmental → Terrestrial → Soil	24.81%
Cnidaria	Host-Associated → Invertebrates → Cnidaria	8.27%
Freshwater	Environmental → Aquatic → Freshwater	6.77%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	4.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.01%
Unclassified	Environmental → Aquatic → Unclassified	0.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.05%
Oceanic	Environmental → Aquatic → Marine → Oceanic	19.55%
Unclassified	Environmental → Aquatic → Marine → Unclassified	14.29%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	13.53%
Coral	Host-Associated → Invertebrates → Cnidaria → Coral	8.27%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	4.51%
Coastal	Environmental → Aquatic → Marine → Coastal	3.76%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.01%
Loam	Environmental → Terrestrial → Soil → Loam	2.26%
Lake	Environmental → Aquatic → Freshwater → Lake	1.50%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.50%
Creek	Environmental → Aquatic → Freshwater → Creek	0.75%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	19.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.54%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	14.29%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	9.02%
Unclassified	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified	8.27%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	4.51%
Microbial Mats	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Microbial Mats	4.51%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.76%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.01%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.26%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.50%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.75%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.75%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.75%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.75%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	15.79%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	12.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	11.28%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	9.02%
Coral	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral	7.52%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	4.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.51%
Microbial Mats	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Microbial Mats → Microbial Mats	4.51%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.76%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.01%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	3.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.26%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.50%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.50%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.50%
Tidal Flat	Environmental → Aquatic → Marine → Unclassified → Unclassified → Tidal Flat	1.50%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.75%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.75%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.75%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.75%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.75%
Coral	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral	0.75%
Polar Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine	0.75%
North Sea	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → North Sea	0.75%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001548	Estuarine microbial mat communities from Elkhorn Slough, California, USA - CR1B Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300002650	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF119 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002658	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF127 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300003680	Groundwater microbial communities from S. Glens Falls, New York, USA - water-only treatment rep 3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300003717	Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_9 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003725	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004954	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI054_120m_RNA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004961	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 83 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006227	Marine sediment microbial communities, 10.1 km from oil contamination, ambient, Gulf of Mexico ? BC101	Environmental	Open in IMG/M
3300006230	Marine sediment microbial communities, 15.1 km from oil contamination, ambient, Gulf of Mexico ? BC155	Environmental	Open in IMG/M
3300006361	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S5 AAIW_A metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006702	Metatranscriptome of deep ocean microbial communities from South Indian Ocean - MP1138 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006718	Marine microbial communities from the Deep Atlantic Ocean - MP0747 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental	Open in IMG/M
3300008013	Coral microbial communities from Puerto Morelos, Mexico - Orbicella T R C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008016	Coral microbial communities from Puerto Morelos, Mexico - Siderastrea C C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008031	Coral microbial communities from Puerto Morelos, Mexico - Siderastrea C B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008035	Coral microbial communities from Puerto Morelos, Mexico - Orbicella T R B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008038	Coral microbial communities from Puerto Morelos, Mexico - Orbicella C B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008041	Coral microbial communities from Puerto Morelos, Mexico - Orbicella C C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008043	Coral microbial communities from Puerto Morelos, Mexico - Orbicella T R A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008044	Coral microbial communities from Puerto Morelos, Mexico - Orbicella C A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008568	Microbial communities of thrombolites from Highborne Cay, Bahamas - Zone1_total_RNA	Environmental	Open in IMG/M
3300008651	Microbial communities of saline water collected from the North Sea in Germany - HE327_13	Environmental	Open in IMG/M
3300008724	Microbial communities of thrombolites from Highborne Cay, Bahamas - Zone1_mRNA	Environmental	Open in IMG/M
3300008872	Microbial communities of Wadden Sea tidal flat in Germany - 0850 lateLowTide	Environmental	Open in IMG/M
3300008874	Microbial communities of Wadden Sea tidal flat in Germany - 1250 highTide	Environmental	Open in IMG/M
3300009348	Microbial communities of thrombolites from Highborne Cay, Bahamas - Zone2_total_RNA	Environmental	Open in IMG/M
3300009349	Microbial communities of thrombolites from Highborne Cay, Bahamas - Zone2_mRNA	Environmental	Open in IMG/M
3300009355	Microbial communities of thrombolites from Highborne Cay, Bahamas - Zone3_total_RNA	Environmental	Open in IMG/M
3300009724	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_245_18m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010060	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010064	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010066	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010070	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010074	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010082	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010083	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010086	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010106	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010123	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010140	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011279	Marine microbial communities from the Southern Atlantic ocean - KN S19 NT30 metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011293	Marine microbial communities from the Southern Atlantic ocean - KN S14 O2min_A metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011298	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S2 DCM_A metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011301	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S12 O2min_A metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011314	Marine microbial communities from the Southern Atlantic ocean - KN S15 Bottom_A metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011316	Marine microbial communities from the Southern Atlantic ocean - KN S19 Bottom_A metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012375	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012413	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA6.ICE_1m.20151110 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012470	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012472	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012524	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012686	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES055 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012698	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES071 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012969	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016726	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011504BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016733	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011501AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016735	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071406BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016747	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300018605	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_110 - TARA_N000001754 (ERX1782444-ERR1712177)	Environmental	Open in IMG/M
3300018845	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_081 - TARA_N000001426 (ERX1809760-ERR1740122)	Environmental	Open in IMG/M
3300018874	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_085 - TARA_N000001024 (ERX1809749-ERR1740115)	Environmental	Open in IMG/M
3300018952	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_064 - TARA_N000000539 (ERX1782281-ERR1712142)	Environmental	Open in IMG/M
3300018971	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_143 - TARA_N000003148	Environmental	Open in IMG/M
3300018974	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_066 - TARA_N000000809 (ERX1782160-ERR1711971)	Environmental	Open in IMG/M
3300018979	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_153 - TARA_N000002817 (ERX1782403-ERR1712037)	Environmental	Open in IMG/M
3300018982	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001384 (ERX1782271-ERR1711935)	Environmental	Open in IMG/M
3300019000	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001394 (ERX1782320-ERR1712129)	Environmental	Open in IMG/M
3300019010	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_081 - TARA_N000001428 (ERX1809462-ERR1739838)	Environmental	Open in IMG/M
3300019012	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_081 - TARA_N000001426 (ERX1809764-ERR1740129)	Environmental	Open in IMG/M
3300019021	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_085 - TARA_N000001034 (ERX1782268-ERR1711957)	Environmental	Open in IMG/M
3300019043	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_109 - TARA_N000001784 (ERX1782103-ERR1712098)	Environmental	Open in IMG/M
3300019211	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019245	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019267	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071402VT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019274	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071405CT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021266	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.458 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021273	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.386 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021276	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.491 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021278	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.302 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021302	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.270 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021304	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.300 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021314	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.671 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021337	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.425 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021355	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 150m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021846	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.591 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021853	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.189 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021950	Metatranscriptome of marine eukaryotic phytoplankton communities from the Arctic Ocean - ARK-118M (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300022166	Metatranscriptome of freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022595	Metatranscriptome of coral microbial communities from Popa Island, Bocas del Toro, Panama - APAL T2 (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300027264	APAL treatment metatranscriptome co-assembly	Host-Associated	Open in IMG/M
3300029644	Metatranscriptome of soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030699	Metatranscriptome of marine eukaryotic phytoplankton communities from Antarctic Ocean - PS103-11 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030789	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030831	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_141 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031097	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_183 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031496	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB21_1105_33.1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031559	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB4_937_33.10 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031581	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - AG5_1286_33.1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031734	Metatranscriptome of marine eukaryotic phytoplankton communities from Antarctic Ocean - PS103-7 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300032127	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB9_Tmax_529 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032161	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB4_Tmax_934 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300033527	Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12189J15679_1088892	3300001548	Estuarine	PFELDSNLLLSSGRHGEDRKRQYLYDHETPLLDDLADLLY*
Ga0005470J37258_1003461	3300002650	Forest Soil	CCATAGQEDPFELDSNLLLSSGRHGEDREAVLLYDHETPLLGDLAD*
Ga0005478J37266_1001211	3300002658	Forest Soil	QNNNLLLCCATAGQEDPFELDSNLLLSSGRHGEDREAVLLYDHETPLLGDLAD*
Ga0003069J53074_10207201	3300003680	Groundwater	DPFELDSSLLLSSGRLGEDVRGSTSYDHETPLLVDLADLLYNGIA*
Ga0006766_1094101	3300003717	Avena Fatua Rhizosphere	AGQEDPFELDSSLLLSSGRLGEDVRGSTSYDHETPLLVDLADLLYNGIA*
Ga0008087_1015251	3300003725	Tropical Rainforest Soil	AGQEDPFELDSNLLLSSGRHGEDRKRQYLDDHETPLLDDLADLLYLALPCLV*
Ga0066626_1579282	3300004954	Marine	MLRATAGQEDPFELDSNLLLSSGRHGEDRKRQYNLLYDHETPLLDDLADLLY*
Ga0072333_10045981	3300004961	Peatlands Soil	EDPFELDSNLLLSSGRHGEDREAALLCDHETPLLDDLADLLYLALPLLSLF*
Ga0082386_1052791	3300006227	Marine	DSNLLLSSGRNCEDRKRQYINLYDHETPLLYDLADLLY*
Ga0082386_1053421	3300006227	Marine	GQEDPFELDSNLLLSSGRHGRDRKRQYFLYDNETPLLGDLADLLY*
Ga0082390_1177761	3300006230	Marine	LLLLANLFGEDRKRQLISVNDLETPLLGDMADLLRK*
Ga0079055_1034433	3300006361	Marine	MIIRTTAGQEDPFELDSSLLLSSGRHGEDSKRQYSIKLLYEHETPLLDDLAD*
Ga0031688_10072393	3300006702	Deep Ocean	RATAGQEDPFELDSNLLLSSGRHGEDRKRQYFLYDHETPLLDDLADLLY*
Ga0031688_10139571	3300006702	Deep Ocean	MIIRTTAGQEDPFELDSNLLLSSGRHGEDRKRQYVSTYDHETPLLDDLADLLY*
Ga0031688_10193122	3300006702	Deep Ocean	TTAGQEDPFELDSNLLLSSGRHGEDRKRQYVSTYDHETPLHDDLADLLY*
Ga0005504_10031672	3300006718	Deep Ocean	DPFELDSNLLLSSGRHGEDSKRQCIHLYDHETPLLDDLAD*
Ga0066376_105084641	3300006900	Marine	LCVRATAGQEDPFELDSNLLLSSGRHGEDRKRQYFLYDHETPLLDDLADLLY*
Ga0099809_110777401	3300008013	Coral	QEDPFELDSNLLLSSGRHGEDCKRQYILYIYDHETPLLIDLADLMYYY*
Ga0099818_11020721	3300008016	Coral	LDSNLLLSSGRHGEDRKRQYINLYDHETPLLDDLADLLY*
Ga0099817_11237371	3300008031	Coral	NLLLSSGRHGEDRKRQYINLYDHETPLLDDLADLLY*
Ga0099808_11460271	3300008035	Coral	AGQEDPFELDSNLLLSSGRHGEDRKRQYIQLYDHETPLLDDLADLLY*
Ga0099805_13006502	3300008038	Coral	TAGQEDPFELDSNLLLSSGRHGEDRKRQYNYLYDHETPLLDDLADLLY*
Ga0099806_15596791	3300008041	Coral	LDSNLLLSSGRHGEDRKRQYIQLYDHETPLLDDLADLLY*
Ga0099807_10181591	3300008043	Coral	AGQEDPFELDSNLLLSSGRHGEDRKRQYIQLYDHETPLLDDLADLLYSHCPHLQF*
Ga0099804_11130731	3300008044	Coral	TAGQEDPFELDSNLLLSSGRHGEDRKRQYIQLYDHETPLLDDLADLLY*
Ga0099804_12542511	3300008044	Coral	LLLSSGRHGEDRKRQYIHLYDHETPLLDDLADLLY*
Ga0103784_10059421	3300008568	Microbial Mats	NLLLSSGQHGEDRKRQYFLYDHETPLLADLADLLYIKYGIAFLVLF*
Ga0103623_10060001	3300008651	North Sea	QEDPFELDSNLLLSSSRHGEDSKRQYTPVYDHETPLLVDLADLLYQYYTINW*
Ga0103785_1030892	3300008724	Microbial Mats	LDSNLLLSSGRHGEDCKRQYIFIYIYVHETPLLIDLADLMY*
Ga0103385_1002311	3300008872	Tidal Flat	GQEDPFELDSNLLLSSGRYGEGCKRQYIYDHETPLLIGLADLL*
Ga0103387_1002291	3300008874	Tidal Flat	FELDSNLLLSSGRHGEDRKRQYALYVYNHETPLLDDLADLLYIYSIEYYYT*
Ga0103786_10078221	3300009348	Microbial Mats	QEDPFELDSNLLLSSGRHGEDRKRQYNFLYDHETPLLDDLADLLH*
Ga0103786_10140981	3300009348	Microbial Mats	PFELDSNLLLSSGRHGEDCKRQYNYSKYTLYDHETPLLIDLADLLY*
Ga0103787_10089691	3300009349	Microbial Mats	ILLLSIGQHGEDRKRQYFMYNHETPLLADLIDLLY*
Ga0103788_10035062	3300009355	Microbial Mats	GQEDPFELDSILLLSIGQHGEDSKRQYIYLYNHETPLLAGLIDLLY*
Ga0123380_1169452	3300009724	Marine	LDSNLLLLSSRQGADRKRQYLYDHETPLLVDLADLLY*
Ga0127425_1203151	3300010060	Grasslands Soil	GQEDPFELDSSLLLSSGRLGEDVRGSTSYDHETPLLVDLADLLYNGIA*
Ga0127433_1049531	3300010064	Grasslands Soil	AGPEDPFELDSSLLLSSGRLGEDVRGSTSYDHETPLLVDLADLLYNGIA*
Ga0127427_1422151	3300010066	Grasslands Soil	ARQEDPFELDSSLLLSSGRLGEDVRGSTSYDHETPLLVDLADLLYNGIA*
Ga0127441_1144341	3300010070	Grasslands Soil	VGAEASNKLDSSLLLSSGRLGEDVRGSTSYDHETPLLVDLADLLYNGIA*
Ga0127439_1441502	3300010074	Grasslands Soil	VEEESFEHDSKLLLSSGRHGEDRKRQYLRYDHETPLLGDLAD*
Ga0127469_1079751	3300010082	Grasslands Soil	DPFELDSSLLLSSGRHGIVVRGSTLYNHETPLLGDLADLLYSGIAFCLLKN*
Ga0127469_1901011	3300010082	Grasslands Soil	QEDPFELDSSLLLSSGRLGEDVRGSTSYDHETPLLVDLADLLYNGIA*
Ga0127478_10566671	3300010083	Grasslands Soil	LDSNLLLSSGRHGEDRKRQYLRYDHETPLLGDLAD*
Ga0127496_11004511	3300010086	Grasslands Soil	FELDSSLLLSSGRHGIVVRGSTLYNHETPLLGDLADLLYSGIAFCLLKN*
Ga0127472_10010121	3300010106	Grasslands Soil	VGQVEPFELDSSLLLSSGRLGEDVRGSTSYDHETPLLVDLADLLYNGIA*
Ga0127479_10430561	3300010123	Grasslands Soil	AGEEDPFELDSSLLLSSGRLGEDVRGSTSYDHETPLLVDLADLLYNGIA*
Ga0127456_11972391	3300010140	Grasslands Soil	SSLLLSSGRHGIVVRGSTLYNHETPLLGDLADLLYSGIAFCLLKN*
Ga0126318_102600891	3300010152	Soil	QEDPFELDSSLLLSSGRHGEDCKRQYHYDLETPLLGDLADLLYSGIVI*
Ga0150983_125652061	3300011120	Forest Soil	IWAGQEDPFELDSSLLLSSGRYGEDSKRQYCSNLETPLLGDLADLLY*
Ga0138400_1450871	3300011279	Marine	NLLLSVDQHGEDRKRQLISINDHETPLLDDLADLLY*
Ga0138376_1923511	3300011293	Marine	DPFELDSSLLLSSGRHGEDSKRQYSIKLLYEHETPLLDDLAD*
Ga0138376_1953261	3300011293	Marine	DPFELDSNLLLSSGRHGEDCKRQCIYLYDHETPLLDDLAD*
Ga0138362_10565931	3300011298	Marine	PFELDSNLLLSVDQHGEDRKRQLNSFNDHETPLLDDLADLLY*
Ga0138360_10871921	3300011301	Marine	LDSNLLLSVDQHGEDRKRQLISINDHETPLLDDLADLLY*
Ga0138382_11021351	3300011314	Marine	LLLSSGRHGEDRKRQYFLYDHETPLLDDLADLLY*
Ga0138382_11251671	3300011314	Marine	PFELDSNLLLSSGRHGEDRKRQYFLYDHETPLLDDLADLLY*
Ga0138399_10458841	3300011316	Marine	SNLSLSSGRLGEVVRGSIFGYDHETPLLDDLADLL*
Ga0138399_11236771	3300011316	Marine	FELDSNLLLSSGRHGEDCKRQCIYLYDHETPLLDDLAD*
Ga0150985_1092396181	3300012212	Avena Fatua Rhizosphere	ATAGQEDPFELDSNLLLSSGRHGEDRKRQYLRYDHETPLLGDLAD*
Ga0134027_11463511	3300012364	Grasslands Soil	AWQEDPFELDSSLLLSSGRLGEDVRGSTSYDHETPLLVDLADLLYNGIA*
Ga0134034_11212111	3300012375	Grasslands Soil	FELDSSLLLSSGRHGEVVRGSILCDFETPLLGDLQWSS*
Ga0134034_12226851	3300012375	Grasslands Soil	LDSSLLLSSGRLGEDVRGSTSYDHETPLLVDLADLLYNGIA*
Ga0138258_16843751	3300012413	Polar Marine	PFELDSNLLLSSGRHGEDCKRQCIYLYDHETPLLDDLAD*
Ga0150984_1139718102	3300012469	Avena Fatua Rhizosphere	NCFLQFFLLCCATAGQEDPFELDSNLLLSSGRHGEDRKRQYLRYDHETPLLGDLAD*
Ga0129329_10996831	3300012470	Aqueous	DPFELDSNLLLSSSRHGEDSKRQYTPVYDHETPLLVDLADLLYQYYTINW*
Ga0129328_11067231	3300012472	Aqueous	QEDPFELDSNLLLSSSRQGADRKRQYLVYDHETPLLVDLADLLYYLGIALLQYC*
Ga0129331_10506481	3300012524	Aqueous	ELDSNLLLSSGRHGEDRKRQYIFLYDHETPLLDDLADLLYHYGIA*
Ga0129331_14973261	3300012524	Aqueous	PFELDSNLLLSSSRHGEDSKRQYTPVYDHETPLLVDLADLLYQYYTINW*
Ga0157560_10065601	3300012686	Freshwater	PFELDSSLLLSSGRHGEVVRGSTSYDFETPLLGDLADLLYSGIAY*
Ga0157570_10796431	3300012698	Freshwater	DPFELDSSLLLSSGRHGEVVRGSTSYDFETPLLGDLADLLYSGIAY*
Ga0129332_12234191	3300012969	Aqueous	PFELDSNLLLSSGRHGEDCKRQYIYVYHLYIDHETPLLIDLADLLY*
Ga0182045_10892091	3300016726	Salt Marsh	LDSNLLLSSGRLGEVVRGSTFGYDHETPLLDDLADLL
Ga0182042_10265071	3300016733	Salt Marsh	PFELDSNLLLSSSRQGADRKRQYLVYDHETPLLVDLADLLYYLGIALLQYC
Ga0182074_12202732	3300016735	Salt Marsh	MLHSTAGQEDPFELDSNLILSASEQGIDRKRQCAHAYDNVTPLLVHLADLLY
Ga0182078_106990871	3300016747	Salt Marsh	IMFRHHNYILRTTAGQEDPFELDSILLLSSGRHGEDRKRQYIYLYDHETPLLDDLADLLY
Ga0193339_10080651	3300018605	Marine	PFELDSNLLLSSGRHGEDCKRQCIYLYDHETPLLDDLAD
Ga0193042_10734871	3300018845	Marine	EDPFELDSNLLLSSGRHGEDSKRQCIHLYDHETPLLDDLAD
Ga0192977_11118831	3300018874	Marine	FELDSNLLLSSGRHGEDCKRQCIYLYDHETPLLDDLAD
Ga0192852_102650241	3300018952	Marine	HGELDSNLLLSSGRHGEDCKRQCIYLYDHETPLLDDLAD
Ga0193559_100965341	3300018971	Marine	QEDPFELDSNLLLSSGRHGEDCKRQCIYLYDHETPLLDDLAD
Ga0192873_103956871	3300018974	Marine	DSNLLLSSGRHGEDCKRQCMYLYDHETPLLDDLAD
Ga0193540_102224931	3300018979	Marine	LDSNLLLSSGRHGEDSKRQCIHLYDHETPLLDDLAD
Ga0192947_102702111	3300018982	Marine	ELDSNLLLSSGRHGEDCKRQCIYLYDHETPLLDDLAD
Ga0192953_101275101	3300019000	Marine	DSNLLLSSGRHGEDCKRQCIYLYDHETPLLDDLAD
Ga0193044_102772401	3300019010	Marine	TWDLLLSSGRHGEDSKRQCIHLYDHETPLLDDLAD
Ga0193043_101509121	3300019012	Marine	QEDPFELDSNLLLSSGRHGEDCKRQCIHLYDHETPLLDDLAD
Ga0192982_100916921	3300019021	Marine	HGDPFELDSNLLLSSGRHGEDCKRQCIYLYDHETPLLDDLAD
Ga0192998_101655051	3300019043	Marine	IIIALFELDSNLLLSSGRHGEDCKRQCIYLYDHETPLLDDLAD
Ga0187799_12415491	3300019211	Peatland	DPFELDSSLLLSSGRHGEDCKRQYHYDLETPLLGDLADLLYSGIVF
Ga0187791_13436161	3300019245	Peatland	SSLLLSSGRHGEDRKRQYHHDLETPLLGDLADLLYSGIVF
Ga0184641_14434212	3300019254	Groundwater Sediment	GQEDPFELDSNLLLSSGRHGEDRKRQYLRYDHETPLLGDLAD
Ga0182069_11965891	3300019267	Salt Marsh	EDPFELDSNLLLSSGRHGEDRKRQYLYDHETPLLDDLADLLY
Ga0184644_11776281	3300019269	Groundwater Sediment	PFELDSNLLLSSGRHGEDRKRQYLRYDHETPLLGDLAD
Ga0182073_14373951	3300019274	Salt Marsh	FELDSNLLLSSGRHGEDRKRQYLYDHETPLLDDLADLLY
Ga0184642_12333712	3300019279	Groundwater Sediment	QEDPFELDSNLLLSSGRHGEDRKRQYLRYDHETPLLGDLAD
Ga0210348_1524561	3300021266	Estuarine	IYLCVNTYCVTRTHIPHSTAGQEDPFELETNLLLSSGRHGRDRKRQYFLYDNETPLLGDLADLLY
Ga0210340_10078731	3300021273	Estuarine	GQEDPFELDSSLLLSSGRHGAVVRGSTSYNHETPLLVDLADLLYSGIKLLLV
Ga0210340_10702612	3300021273	Estuarine	DTNLLLSSGRHGEDRKRQYFLYDHETPLLDDLADLLY
Ga0210354_11250651	3300021276	Estuarine	DPFELDSNLLLSSGRQGEDRKRQYFLYDHETPLLVDLADLLYYFGIAF
Ga0210332_1172271	3300021278	Estuarine	NLLLSSGRHGEDRKRQYLYDHETPLLDDLADLLYLALPLLLLFK
Ga0210328_11170871	3300021302	Estuarine	GQEDPFELDSNLLLSSGRHGEDRKRQYLYDHETPLLDDLADLLY
Ga0210331_10958091	3300021304	Estuarine	DPFELDSNLLLSSGRHGEDRKRQYLYDHETPLLDDLADLLYLALPLLLLFK
Ga0210370_11087631	3300021314	Estuarine	PFELDSNLLLSSGRHGEDRKRQYLYDHETPLLDDLADLLYLALPLLLLFK
Ga0210341_13570931	3300021337	Estuarine	DPFELDSNLLLSSGRHGEDRKRQYLYDHETPLLDDLADLLY
Ga0206690_109762851	3300021355	Seawater	PFELDSNLLLSVDQHGEDRKRQLISINDHETPLLDDLADLLY
Ga0210359_1546441	3300021846	Estuarine	PFELDSNLLLSSGRHGRDRKRQYFLYDNETPLLGDLADLLY
Ga0210323_10200861	3300021853	Estuarine	EDPFELDSSLLLSSGRLGEVVRGSTLYNHETPLLGDLADLLYRGIVSNC
Ga0063101_10757191	3300021950	Marine	AGQEDPFELDSNLLLSSGRHGEDCKRQCIYLYDHETPLLDDLAD
Ga0213932_10746172	3300022166	Freshwater	LDSNLLLLSGRHGEDRKRQYLRYDHETPLLVDLAD
Ga0222625_17421141	3300022195	Groundwater Sediment	QRRGKKTLFELDSSLLLSSGRLGEDVRGSTSYDHETPLLVDLADLLYNGIA
Ga0222728_11073412	3300022508	Soil	SSLLLSSGRHGEDRKRQYFLYNHETPLLGDLADLLYSGIAFFV
Ga0215184_11179771	3300022595	Coral	DPFELDSNLLLSSGRHGEDRKRQYINLYDHETPLLDDLADLLY
Ga0255580_10742901	3300027264	Coral	DPFELDSNLLLSSGRHGEDRKRQYIQLYDHETPLLDDLADLLY
Ga0206083_1006581	3300029644	Soil	DPFELDSNLLLSSGRHGEDRKRQYLWYDHETPLLDDLADLLYQSGIALIGIV
Ga0307398_102316081	3300030699	Marine	DPFELDSNLLLSSGRHGEDCKRQCIYLYDHETPLLDDLAD
Ga0102766_109092551	3300030789	Soil	ATAGQEDPFELDSNLLLSSGRHGEDRKRQYFVYDHETPLLGDLAD
Ga0308152_1068131	3300030831	Soil	DPFELDSSLLLSSGRLGEDVRGSTSYDHETPLLVDLADLLYNGIA
Ga0308152_1084041	3300030831	Soil	DPFELDSNLLLSSGRHGEDRKRQYLRYDHETPLLGDLAD
Ga0308198_10124231	3300030904	Soil	DPIELDSNLLLSSGRHGEDRKRQYLRYDHETPLLGDLAD
Ga0308155_10033821	3300030987	Soil	AGQEDPFELDSNLLLSSGRHGEDRKRQYLRYDHETPLLGDLAD
Ga0308190_10159571	3300030993	Soil	AGQEGPFELDSNLLLSSGRHGEDRKRQYLRYDHETPLLGDLAD
Ga0308188_10045331	3300031097	Soil	EDPFELDSNLLLSSGRHGEDRKRQYLRYDHETPLLGDLAD
Ga0170822_127218932	3300031122	Forest Soil	MKKIKRTVFEKNPFELDSSLLLSSGRHGEDRKRQYFLYNHETPLLGDLAD
Ga0308130_10297991	3300031496	Marine	AGQGDPFELDSNLLLSSGRHGEDCKRQCIYLYDHETPLLDDLAD
Ga0308135_10428181	3300031559	Marine	FIAFISCAFRIYPFELDSNLLLSSGRHGEDCKRQCIYLYDHETPLLDDLAD
Ga0308125_10321821	3300031581	Marine	FELDSNLSLSSGRHGEVVRGSIILLYYDHETPLLDDLADLLY
Ga0307483_10089471	3300031590	Hardwood Forest Soil	ELDSSLLLSSGRHGIVVRGSTLYNHETPLLGDLADLLYSGIAFCLLKN
Ga0307397_101581961	3300031734	Marine	LDSNLLLSSGRHGEDCKRQCIYLYDHETPLLDDLAD
Ga0315305_10700101	3300032127	Marine	LPIYPFELDSNLLLSSGRHGEDCKRQCIYLYDHETPLLDDLAD
Ga0315301_10189921	3300032161	Marine	GARRPFELDSNLLLSSGRHGEDCKRQCIYLYDHETPLLDDLAD
Ga0316586_10659791	3300033527	Rhizosphere	IFIIVNNYTRATAGQEDPFELDSNLLLLSIWYGEDSKRQNFFKIDHETPLLTDLADLLY
Ga0316586_11226031	3300033527	Rhizosphere	LKKHSTAGQEEHFELDSNLLLSSGRHGEDCKRQYYLFTFNIDHETPLLIDLADLLY

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060086

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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