Sample 3300008651

Basic Information
IMG/M Taxon OID	3300008651 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0117953 \| Gp0126212 \| Ga0103623
Sample Name	Microbial communities of saline water collected from the North Sea in Germany - HE327_13
Sequencing Status	Permanent Draft
Sequencing Center	Goettingen Genomics Laboratory
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

3300008651 Open in IMG/M

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0117953 | Gp0126212 | Ga0103623

Sample Name

Microbial communities of saline water collected from the North Sea in Germany - HE327_13

Sequencing Status

Permanent Draft

Sequencing Center

Goettingen Genomics Laboratory

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	36231368
Sequencing Scaffolds	31
Novel Protein Genes	38
Associated Families	37

Dataset Contents

Total Genome Size

36231368

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses	1
Not Available	15
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2
All Organisms → cellular organisms → Bacteria	3
All Organisms → Viruses → Predicted Viral	4
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	1
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → Viruses

Not Available

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria

All Organisms → cellular organisms → Bacteria

All Organisms → Viruses → Predicted Viral

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium

All Organisms → cellular organisms → Eukaryota

All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

Ecosystem Assignment (GOLD)
Name	Microbial Communities Of Saline Water Collected From The North Sea In Germany
Type	Environmental
Taxonomy	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → North Sea → Microbial Communities Of Saline Water Collected From The North Sea In Germany

Ecosystem Assignment (GOLD)

Name

Microbial Communities Of Saline Water Collected From The North Sea In Germany

Type

Environmental

Taxonomy

Environmental → Aquatic → Unclassified → Unclassified → Unclassified → North Sea → Microbial Communities Of Saline Water Collected From The North Sea In Germany

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

marine biome → marine water body → sea water

Earth Microbiome Project Ontology (EMPO)

Free-living → Saline → Water (saline)

Location Information
Location	North Sea, Germany
Coordinates	Lat. (^o)	54.4365	Long. (^o)	8.2328	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

Zoom:	Powered by OpenStreetMap^©

Location Information

Location

North Sea, Germany

Coordinates

Lat. (^o)

54.4365

Long. (^o)

8.2328

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F002688	Metagenome / Metatranscriptome	536	Y
F003058	Metagenome / Metatranscriptome	510	Y
F003833	Metagenome / Metatranscriptome	466	Y
F005817	Metagenome / Metatranscriptome	389	N
F007123	Metagenome / Metatranscriptome	357	Y
F010726	Metagenome / Metatranscriptome	300	Y
F010928	Metagenome / Metatranscriptome	297	N
F011521	Metagenome / Metatranscriptome	290	N
F013609	Metagenome / Metatranscriptome	269	N
F015169	Metagenome / Metatranscriptome	257	Y
F019141	Metagenome / Metatranscriptome	231	Y
F020685	Metagenome / Metatranscriptome	222	N
F033501	Metagenome / Metatranscriptome	177	Y
F033962	Metagenome / Metatranscriptome	176	N
F039349	Metagenome / Metatranscriptome	164	Y
F040858	Metagenome / Metatranscriptome	161	Y
F040867	Metagenome / Metatranscriptome	161	N
F049593	Metagenome / Metatranscriptome	146	N
F049942	Metagenome / Metatranscriptome	146	N
F054345	Metagenome / Metatranscriptome	140	Y
F057930	Metagenome / Metatranscriptome	135	Y
F058437	Metagenome / Metatranscriptome	135	Y
F059341	Metagenome / Metatranscriptome	134	Y
F060086	Metagenome / Metatranscriptome	133	Y
F060770	Metagenome / Metatranscriptome	132	N
F062184	Metagenome / Metatranscriptome	131	Y
F063588	Metagenome / Metatranscriptome	129	N
F063653	Metagenome / Metatranscriptome	129	N
F066157	Metagenome / Metatranscriptome	127	N
F071649	Metagenome / Metatranscriptome	122	Y
F085721	Metagenome / Metatranscriptome	111	N
F086834	Metagenome / Metatranscriptome	110	Y
F092720	Metagenome / Metatranscriptome	107	Y
F095518	Metagenome / Metatranscriptome	105	N
F104957	Metagenome / Metatranscriptome	100	N
F105292	Metagenome / Metatranscriptome	100	N
F105889	Metagenome / Metatranscriptome	100	Y

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0103623_1000002	All Organisms → Viruses	32956	Open in IMG/M
Ga0103623_1000073	Not Available	8645	Open in IMG/M
Ga0103623_1000149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6177	Open in IMG/M
Ga0103623_1000172	All Organisms → cellular organisms → Bacteria	5658	Open in IMG/M
Ga0103623_1001511	Not Available	1706	Open in IMG/M
Ga0103623_1001985	All Organisms → Viruses → Predicted Viral	1430	Open in IMG/M
Ga0103623_1002144	Not Available	1352	Open in IMG/M
Ga0103623_1002604	Not Available	1184	Open in IMG/M
Ga0103623_1002621	All Organisms → Viruses → Predicted Viral	1181	Open in IMG/M
Ga0103623_1002666	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1168	Open in IMG/M
Ga0103623_1002775	Not Available	1133	Open in IMG/M
Ga0103623_1002791	All Organisms → Viruses → Predicted Viral	1128	Open in IMG/M
Ga0103623_1002882	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1103	Open in IMG/M
Ga0103623_1002992	All Organisms → Viruses → Predicted Viral	1075	Open in IMG/M
Ga0103623_1004066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	874	Open in IMG/M
Ga0103623_1004161	Not Available	860	Open in IMG/M
Ga0103623_1005441	Not Available	715	Open in IMG/M
Ga0103623_1005829	Not Available	683	Open in IMG/M
Ga0103623_1006000	All Organisms → cellular organisms → Eukaryota	671	Open in IMG/M
Ga0103623_1006081	Not Available	664	Open in IMG/M
Ga0103623_1006085	Not Available	664	Open in IMG/M
Ga0103623_1006257	Not Available	653	Open in IMG/M
Ga0103623_1006952	Not Available	611	Open in IMG/M
Ga0103623_1007135	Not Available	602	Open in IMG/M
Ga0103623_1007363	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
Ga0103623_1007458	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
Ga0103623_1007623	Not Available	576	Open in IMG/M
Ga0103623_1007748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	572	Open in IMG/M
Ga0103623_1008468	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	542	Open in IMG/M
Ga0103623_1009265	Not Available	514	Open in IMG/M
Ga0103623_1009399	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	509	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0103623_1000002	Ga0103623_100000237	F039349	MAILTKTEGYFIINEGAISLTESTSVSYRDDATVQEFDTEALMLAAHEEQFPDQYLHDSDEL*
Ga0103623_1000073	Ga0103623_100007312	F060770	MTNTTTIKTNVFNSMMEFASTKFDNFYKATNSVIPCYLEKVATIGWVASYEDPKWKQTGLSVKEATQQFGTKAVRVKKNALNNGNDMIEVQDGFTSDEKEFDTPKAAIAWLETKVPFSMKLSEFK*
Ga0103623_1000149	Ga0103623_10001495	F062184	MSSTFEEVKEQILNKYDVDFLCELLGITSESLVDRYEDLVMKNLDMFTEEDEASE*
Ga0103623_1000172	Ga0103623_10001729	F066157	MWAIVLATMLASGEPQVPTIMSSYRTLDTCRKELLRVGTIGGYEPVVSPMVGLAVVKVEAKKTITAFCVKDMRSI*
Ga0103623_1001511	Ga0103623_10015113	F049593	MDKELQQYYETLLDLFASQGWKQYVEDISDNMDLLQDITTIPDEKQFWFRRGQIEALQRVLSYESAIKNSYEDFEKEQYA*
Ga0103623_1001985	Ga0103623_10019852	F015169	MERRMEDKQYYHFKKKCSRPSVETTSEHFYVCNEDARWDDVMRQFAAFLDSCGYVGVYEKVDIMLEDYWDTGLDTGGFRA*
Ga0103623_1002144	Ga0103623_10021443	F104957	MKVNQAIWDGLKKQIEHYTEQDKEITDVTITYQVKPSAERNFLKLTVKQ*
Ga0103623_1002604	Ga0103623_10026043	F105292	MKHVRLFEQFVNEAKVDKKYFDKVVKVLSKSKYPFTVMLVTKWNEIDIVIGYDAPDAISDDIDQRLSKAKLNWGGNSGISISGDSSNYSRREYDEIARINGGHRDY*
Ga0103623_1002621	Ga0103623_10026214	F005817	MRSNLLSRLKPEFKKGLEDNKLRYPSMTNDIEFLLTQIFYYDDLTVRQVLNIFVFSDMEYLDRKSFDWRYGEDIFEIENNVA*
Ga0103623_1002621	Ga0103623_10026215	F086834	MCEWTLADIKNRASNKAFAKVTILTLDVETYKEDLRTGNIGGV
Ga0103623_1002666	Ga0103623_10026662	F013609	MLKVLVLAKLILLGMGKKAMLILFVGFALSSCFTIHPEMQHARSIDKGGRYYSVGAFGGANVLVQSYGVAGFYNYGLTDKIDWSTDGSFSVQASSLKRAFQGFGVNQYNLSTGPKFSMLNNRLALRLPATITFTADDLFLSTSPTLLWDVADEKATLFLRYNRLYERNAIEGYSGDLIFGFNYFVPFYSDQLIISIQSNGLGLYGGVGLTL*
Ga0103623_1002775	Ga0103623_10027753	F010726	MKLVFALIVLINGTVDVKATSHWHDLNRCKWFAEELTIQGTRKRYSTPVMAYCVPKYVDPSKVLIHD*
Ga0103623_1002791	Ga0103623_10027911	F071649	MTTNYTTDAQIDAQGLKHEEWLEASMKAQRHMFNTARGKGIAIMSWKDTDFHDDHHYVVMAQNDKLEFVTWVWANGGFHNGHYFNGDEIAAWT
Ga0103623_1002877	Ga0103623_10028771	F105889	LWEALKEHLNNLRNLELQGLAVATSELELYRKQGKASSLANLLQLKEQAIEARQRIEEQQ
Ga0103623_1002882	Ga0103623_10028821	F095518	MKKHLFITILLLLSLSGKSQTIQLKTGLDAKAKTYLNFATEEFEGRLSAQPDHIDLTLRNTSSEALAYKNGDFLLTSSRGNGDELCADLLLIAPGKKVKVTLTRCKDADRLGLFGLKPAYKSYDSFTSESTFLIDQEFILTIGTYKVRFYTDL*
Ga0103623_1002992	Ga0103623_10029921	F085721	TDTEIKDRTAGKCFAKINALENSLEYLATQKPYLAYTQDMIDAQISFKRRELTIWNHMALLNETNT*
Ga0103623_1003518	Ga0103623_10035182	F003058	MTDKEMSKLADIIVDKIIERQKAYDEEFKADIQSMVDENTNLEFGTITQDELIIEEIDGLQERLAKLEEKEDYEAARIVANKIKHLKNKYNL*
Ga0103623_1004066	Ga0103623_10040661	F054345	VFLYSGFLVYFFDFSIKTVGGGPTCQSLFFACAKKSNQKKAHNLTKIDPDITYSLWDGFIQYTLATPTKTFFTRLSWSSISELASSQYHSDSADFSKHNEATTNKFSRLLFILEQVKTVPNGRLLLLSSACRSKKIVEEPSREKIAMKSSSSKE*
Ga0103623_1004066	Ga0103623_10040662	F059341	MLDVSAAQKKYPLYRLAIISLELLDRKHCEMHPSWLSFAVKLTAFLVTF
Ga0103623_1004161	Ga0103623_10041613	F057930	VGNFIMAVSYTDSYDDLVYVSNFVNCDMALDYYNMNCTDAKIMMCQLEQYLYMPIGHNSDSSFDFEPTDRQSCGFVGVQKPKFIEE*
Ga0103623_1004566	Ga0103623_10045662	F011521	IFKFKAESIVNIEINGQTRQAIYTKLWGSRPTSTTNCQSLPSRGFSTSTGEIYVETWFDLKDSSLLKQVFTKYGCVPSRIIVSKETWVLNN*
Ga0103623_1004988	Ga0103623_10049882	F013609	YGLTDKLDWSTDGSFSVQASSLNRAFQGFGVNQYNLSSGPKLSVLNNRIALRLPATVTYSTEDIYLSTSPTLLLDVIDEKATLFLRYNRLYERNAIEGYSGDLVFGFNYFLPFYSNQLLLSIQSNGVGLYGGIGLTL*
Ga0103623_1005441	Ga0103623_10054412	F049942	MNDKDFLNDLDRGDYDASKGYPHQEGESQAYDMGYAFRYMIEQMETARSEQ*
Ga0103623_1005829	Ga0103623_10058292	F033962	MTMTELKQYMAEQKRIKVIQWNKEREGNHCQGFTQKEFEQSMEVDRIKSRTRRTHSKGNLWVFNDTKDRELFTK*
Ga0103623_1006000	Ga0103623_10060001	F060086	QEDPFELDSNLLLSSSRHGEDSKRQYTPVYDHETPLLVDLADLLYQYYTINW*
Ga0103623_1006081	Ga0103623_10060812	F007123	KADVALTKSAEEALPHFDLAVAKSLVEKFAEEEKIMEALKACDASIGASMEEFGKSDVDGEFATSADKLDALVKSYMDENQLKKSEFAKAYAAVAKTEEGKALITKSYKGE*
Ga0103623_1006085	Ga0103623_10060851	F002688	VGMEENMSNQEHDNKGALGAVAIIAFMMVGLPIIIGTSMGWFNLFGILGL*
Ga0103623_1006257	Ga0103623_10062572	F019141	MSKIKEQLIGYEQNDWIADEDHVRVDEVTEYLMYAMSVSEMQQVAKQHIQHDLYTMARSDFEKVHYDTIGVHTK*
Ga0103623_1006257	Ga0103623_10062574	F063588	MQFNVAGMFLNVEPRFGIGLDIESVESRPMWTLQDGELSTMAFDGLVLLLPFFIVTLGNVWTEAEEE*
Ga0103623_1006952	Ga0103623_10069521	F003833	QFLINLVTHTLENRVTSGTRTIVRDTPETPFRRGSRVGVQYAMMRQAGGASTRDIMDCTGCSEQRVRAAVSEIRTRVGDAAVITHTQQSNGASYGSGTDHTSYEVQASFEEQTSGVTLLPENSIGNASIWAGIPDEAFEWWQARIAALA*
Ga0103623_1007135	Ga0103623_10071351	F033501	SSTIAKKKKNMNAIEFINEMDRLAEVHFGEFGYDTCSQDEKKAVIKLLLHNTK*
Ga0103623_1007363	Ga0103623_10073631	F040858	MSNQRMGKTHKAAANDGTGEMKLRIFFRKAAELMEPESDAQFYFEQIVEHINNGGNLNTDDSKAIGRILGV*
Ga0103623_1007458	Ga0103623_10074581	F040867	RQGPRANGHGYNINMVKEEVDTMTIENVYGQDVVNQGALYLTLLAKAVINIDGGRSRNEEDDLLIAEAMAWVESFSNFIDDEEMTEH*
Ga0103623_1007623	Ga0103623_10076231	F058437	MKIFAESSASDVDVREEAHSIVRALNEIEITLDAAISAEVILDKQRK*
Ga0103623_1007748	Ga0103623_10077482	F010928	METQKHMGRGELVDRLTAQVRDRGFAIALLKKRGDLTASGELTAKGRARDRMTAEERALDRAGETSATATYNPKTNRVTKK*
Ga0103623_1008468	Ga0103623_10084682	F092720	RVLGVWDHVFLADHGIKAHFILSRALGDNRGDAEMKRSKLLALFADLKIPFARWTRNATFYDDNMGVLDMAEKMGIRTKNAVQLNLQLTKKQA*
Ga0103623_1009265	Ga0103623_10092652	F020685	MININMRLGIGFDIEHNDNICHVVGDDEGRFVAAYEGLIIRIPFFSVYIGEFSELDEGVLEVED*
Ga0103623_1009399	Ga0103623_10093992	F063653	MLTIPDICDKLKRMDEVTILELLEINSEEIVNRFQDKIEDIADYLEEALDDN*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300008651: Microbial communities of saline water collected from the North Sea in Germany - HE327_13

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences