NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F098955

Metagenome / Metatranscriptome Family F098955

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098955
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 142 residues
Representative Sequence MDSSAIPVFLAGPFPVLHTSRVQDAEQEVELDVALLISGLPTMLAATRFPLDDTWERIQRALASGDARLGVAGMPHEAESIAGTPEVFPSAYVGLECANGERLVLAHIKGSDREQESEAYARSVISAILNGKTPAELGEPIED
Number of Associated Samples 77
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 84.47 %
% of genes near scaffold ends (potentially truncated) 27.18 %
% of genes from short scaffolds (< 2000 bps) 63.11 %
Associated GOLD sequencing projects 72
AlphaFold2 3D model prediction Yes
3D model pTM-score0.86

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil
(11.650 % of family members)
Environment Ontology (ENVO) Unclassified
(36.893 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(58.252 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.79%    β-sheet: 41.52%    Coil/Unstructured: 42.69%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.86
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Structural matches with PDB biological assemblies

PDB IDStructure NameBiol. AssemblyTM-score
2zwsCRYSTAL STRUCTURE ANALYSIS OF NEUTRAL CERAMIDASE FROM PSEUDOMONAS AERUGINOSA10.51048
2zwsCRYSTAL STRUCTURE ANALYSIS OF NEUTRAL CERAMIDASE FROM PSEUDOMONAS AERUGINOSA20.51048
2zxcCERAMIDASE COMPLEXED WITH C220.50665
2zxcCERAMIDASE COMPLEXED WITH C210.50662

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF02272DHHA1 9.71
PF09537DUF2383 5.83
PF00266Aminotran_5 3.88
PF01966HD 2.91
PF01368DHH 1.94
PF12697Abhydrolase_6 1.94
PF01663Phosphodiest 0.97
PF02518HATPase_c 0.97
PF00437T2SSE 0.97
PF02811PHP 0.97
PF02683DsbD 0.97
PF01926MMR_HSR1 0.97
PF00528BPD_transp_1 0.97
PF02780Transketolase_C 0.97
PF02978SRP_SPB 0.97
PF00886Ribosomal_S16 0.97
PF02586SRAP 0.97
PF13580SIS_2 0.97
PF01738DLH 0.97
PF03705CheR_N 0.97
PF12695Abhydrolase_5 0.97
PF02679ComA 0.97
PF14054DUF4249 0.97
PF08811DUF1800 0.97
PF14520HHH_5 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG1352Methylase of chemotaxis methyl-accepting proteinsSignal transduction mechanisms [T] 1.94
COG0228Ribosomal protein S16Translation, ribosomal structure and biogenesis [J] 0.97
COG0541Signal recognition particle GTPaseIntracellular trafficking, secretion, and vesicular transport [U] 0.97
COG1809Phosphosulfolactate synthase, CoM biosynthesis protein ACoenzyme transport and metabolism [H] 0.97
COG2135ssDNA abasic site-binding protein YedK/HMCES, SRAP familyReplication, recombination and repair [L] 0.97
COG5267Uncharacterized conserved protein, DUF1800 familyFunction unknown [S] 0.97

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000033|ICChiseqgaiiDRAFT_c2105426All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300001077|JGI12419J13241_1007798All Organisms → cellular organisms → Bacteria3384Open in IMG/M
3300001077|JGI12419J13241_1008753All Organisms → cellular organisms → Bacteria3162Open in IMG/M
3300002205|metazooDRAFT_1274262All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300002531|JGI25327J35509_1008882All Organisms → cellular organisms → Bacteria4230Open in IMG/M
3300002963|JGI1652J44930_10020334All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium2006Open in IMG/M
3300003331|Ga0006572J49612_1058943All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300003647|metazooDRAFT_1507205All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium1145Open in IMG/M
3300004157|Ga0062590_101911426All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300005059|Ga0070924_1349871All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300005072|Ga0070923_1867286All Organisms → cellular organisms → Bacteria998Open in IMG/M
3300005274|Ga0065724_111865All Organisms → cellular organisms → Bacteria1732Open in IMG/M
3300005898|Ga0075276_10004520All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3046Open in IMG/M
3300006801|Ga0079223_10062149All Organisms → cellular organisms → Bacteria → Proteobacteria2376Open in IMG/M
3300006801|Ga0079223_10733347All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300006845|Ga0075421_100959641All Organisms → cellular organisms → Bacteria971Open in IMG/M
3300006845|Ga0075421_101528161All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300006846|Ga0075430_100945775All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300006851|Ga0079225_10000887All Organisms → cellular organisms → Bacteria16459Open in IMG/M
3300006876|Ga0079217_11121907All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300006894|Ga0079215_10336668All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300006945|Ga0073933_1047244All Organisms → cellular organisms → Bacteria1110Open in IMG/M
3300007004|Ga0079218_11629153All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300009087|Ga0105107_10098094All Organisms → cellular organisms → Bacteria2065Open in IMG/M
3300009091|Ga0102851_10264682All Organisms → cellular organisms → Bacteria1658Open in IMG/M
3300009095|Ga0079224_100020215All Organisms → cellular organisms → Bacteria9450Open in IMG/M
3300009095|Ga0079224_100025709All Organisms → cellular organisms → Bacteria → Proteobacteria8447Open in IMG/M
3300009095|Ga0079224_100071031All Organisms → cellular organisms → Bacteria5047Open in IMG/M
3300009095|Ga0079224_100288588All Organisms → cellular organisms → Bacteria2362Open in IMG/M
3300009095|Ga0079224_100417966All Organisms → cellular organisms → Bacteria1928Open in IMG/M
3300009095|Ga0079224_100446256All Organisms → cellular organisms → Bacteria1859Open in IMG/M
3300009095|Ga0079224_101227073All Organisms → cellular organisms → Bacteria1067Open in IMG/M
3300009095|Ga0079224_102280120All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300009156|Ga0111538_11945419All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300009506|Ga0118657_10026944All Organisms → cellular organisms → Bacteria9020Open in IMG/M
3300009609|Ga0105347_1228822All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300009852|Ga0131851_1013790All Organisms → cellular organisms → Bacteria1488Open in IMG/M
3300009854|Ga0131850_1003666All Organisms → cellular organisms → Bacteria3887Open in IMG/M
3300009854|Ga0131850_1058483All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300009868|Ga0130016_10025069All Organisms → cellular organisms → Bacteria → Proteobacteria7743Open in IMG/M
3300009868|Ga0130016_10197201All Organisms → cellular organisms → Bacteria1529Open in IMG/M
3300009946|Ga0131844_144639All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300009950|Ga0131848_1001089All Organisms → cellular organisms → Bacteria7302Open in IMG/M
3300010268|Ga0134097_1048020All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300011409|Ga0137323_1102669All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300011420|Ga0137314_1063942All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300011440|Ga0137433_1136148All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300012042|Ga0136627_1254083All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300012940|Ga0164243_10034859All Organisms → cellular organisms → Bacteria6168Open in IMG/M
3300012940|Ga0164243_10379025All Organisms → cellular organisms → Bacteria963Open in IMG/M
3300012964|Ga0153916_12876600All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300014878|Ga0180065_1115784All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300017548|Ga0182743_1006405All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria8046Open in IMG/M
3300017648|Ga0180216_1000859All Organisms → cellular organisms → Bacteria29015Open in IMG/M
3300017649|Ga0182741_1185571All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300017653|Ga0180215_1187613All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300017832|Ga0181858_1012036All Organisms → cellular organisms → Bacteria2940Open in IMG/M
3300017832|Ga0181858_1026792All Organisms → cellular organisms → Bacteria1534Open in IMG/M
3300018422|Ga0190265_13093055All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300018469|Ga0190270_13248465All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300019228|Ga0180119_1075142All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300020599|Ga0180220_1000099All Organisms → cellular organisms → Bacteria156678Open in IMG/M
3300020599|Ga0180220_1002320All Organisms → cellular organisms → Bacteria12419Open in IMG/M
3300022554|Ga0212093_1048167All Organisms → cellular organisms → Bacteria2443Open in IMG/M
3300025326|Ga0209342_10246475All Organisms → cellular organisms → Bacteria1573Open in IMG/M
3300025495|Ga0207932_1027264All Organisms → cellular organisms → Bacteria1476Open in IMG/M
3300025571|Ga0207874_1039679All Organisms → cellular organisms → Bacteria1285Open in IMG/M
3300025571|Ga0207874_1059672All Organisms → cellular organisms → Bacteria890Open in IMG/M
3300025572|Ga0207864_1000451All Organisms → cellular organisms → Bacteria57697Open in IMG/M
3300025572|Ga0207864_1031315All Organisms → cellular organisms → Bacteria1699Open in IMG/M
3300026034|Ga0208773_1038319All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300027653|Ga0209487_1000127All Organisms → cellular organisms → Bacteria69491Open in IMG/M
3300027664|Ga0207873_1000655All Organisms → cellular organisms → Bacteria36872Open in IMG/M
3300027664|Ga0207873_1001814All Organisms → cellular organisms → Bacteria19363Open in IMG/M
3300027664|Ga0207873_1036970All Organisms → cellular organisms → Bacteria1912Open in IMG/M
3300027664|Ga0207873_1061416All Organisms → cellular organisms → Bacteria1323Open in IMG/M
3300027909|Ga0209382_10838175All Organisms → cellular organisms → Bacteria974Open in IMG/M
3300027909|Ga0209382_11172053All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300028603|Ga0265293_10101544All Organisms → cellular organisms → Bacteria2287Open in IMG/M
3300030006|Ga0299907_11314376All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300030606|Ga0299906_10881775All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300030613|Ga0299915_10093902All Organisms → cellular organisms → Bacteria2190Open in IMG/M
3300030620|Ga0302046_10009287All Organisms → cellular organisms → Bacteria → Proteobacteria8491Open in IMG/M
3300031145|Ga0310821_100020All Organisms → cellular organisms → Bacteria360259Open in IMG/M
3300031228|Ga0299914_10154939All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Cloacimonetes → unclassified Candidatus Cloacimonetes → Candidatus Cloacimonetes bacterium2030Open in IMG/M
3300031228|Ga0299914_10661285All Organisms → cellular organisms → Bacteria886Open in IMG/M
3300031228|Ga0299914_10789563All Organisms → cellular organisms → Bacteria793Open in IMG/M
(restricted) 3300031825|Ga0255338_1009663All Organisms → cellular organisms → Bacteria6715Open in IMG/M
(restricted) 3300031825|Ga0255338_1060300All Organisms → cellular organisms → Bacteria1436Open in IMG/M
3300031858|Ga0310892_10928732All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300031949|Ga0214473_10002489All Organisms → cellular organisms → Bacteria22634Open in IMG/M
3300031949|Ga0214473_10450718All Organisms → cellular organisms → Bacteria1444Open in IMG/M
3300032144|Ga0315910_11419247All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300032157|Ga0315912_10171289All Organisms → cellular organisms → Bacteria1703Open in IMG/M
3300032828|Ga0335080_10178076All Organisms → cellular organisms → Bacteria2346Open in IMG/M
3300033004|Ga0335084_10577554All Organisms → cellular organisms → Bacteria1151Open in IMG/M
3300033433|Ga0326726_10006070All Organisms → cellular organisms → Bacteria10888Open in IMG/M
3300033480|Ga0316620_11627718All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300033486|Ga0316624_11967135All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300033489|Ga0299912_10049582All Organisms → cellular organisms → Bacteria3670Open in IMG/M
3300033513|Ga0316628_101228038All Organisms → cellular organisms → Bacteria998Open in IMG/M
3300033513|Ga0316628_101293318All Organisms → cellular organisms → Bacteria971Open in IMG/M
3300033521|Ga0316616_100138931All Organisms → cellular organisms → Bacteria2268Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil11.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.68%
CompostEngineered → Solid Waste → Zoo Waste → Composting → Unclassified → Compost8.74%
Feedstock Adapted CompostEngineered → Solid Waste → Feedstock → Composting → Unclassified → Feedstock Adapted Compost8.74%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil6.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil5.83%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.83%
Ionic Liquid And High Solid EnrichedEngineered → Lab Enrichment → Defined Media → Unclassified → Unclassified → Ionic Liquid And High Solid Enriched5.83%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil4.85%
CompostEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Compost4.85%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.91%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment1.94%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.94%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.94%
WastewaterEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater1.94%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.97%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.97%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.97%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.97%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.97%
Mangrove SedimentEnvironmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.97%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.97%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.97%
Switchgrass Adapted CompostEngineered → Solid Waste → Grass → Composting → Bioreactor → Switchgrass Adapted Compost0.97%
Landfill LeachateEngineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate0.97%
Growth MediumEngineered → Lab Enrichment → Defined Media → Unclassified → Unclassified → Growth Medium0.97%
Switchgrass DegradingEngineered → Bioreactor → Unclassified → Unclassified → Unclassified → Switchgrass Degrading0.97%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300001077Cellulose adapted compost microbial communities from Newby Island Compost Facility, Milpitas, CA, USA - BGW Initial CompostEngineeredOpen in IMG/M
3300002205Compost microbial communities from Sao Paulo Zoo, Brazil - ZC4 day 07EngineeredOpen in IMG/M
3300002531Ionic liquid and high solid enriched microbial communities from the Joint BioEnergy Institute, USA - AR20-2-DEngineeredOpen in IMG/M
3300002963Feedstock adapted compost microbial communities from Newby Island compost facility, Milpitas, CA, USA - starting DNAEngineeredOpen in IMG/M
3300003331Ionic liquid and high solid enriched microbial communities from the Joint BioEnergy Institute, USA - AR20-2-R (Metagenome Metatranscriptome, Counting Only)EngineeredOpen in IMG/M
3300003647Compost microbial communities from Sao Paulo Zoo, Brazil - ZC4 day 78EngineeredOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005059Compost microbial communities from Sao Paulo Zoo, Brazil - Zoo Compost 4 - DAY 67 soap2EngineeredOpen in IMG/M
3300005072Compost microbial communities from Sao Paulo Zoo, Brazil - Zoo Compost 4 - DAY 64 soap2EngineeredOpen in IMG/M
3300005274Thermophilic enriched microbial communities from mini bioreactor at UC Davis - Sample SG0.5JP960EngineeredOpen in IMG/M
3300005898Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_405EnvironmentalOpen in IMG/M
3300006801Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2011EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006851Agricultural soil microbial communities from Georgia to study Nitrogen management - Poultry litter 2012EnvironmentalOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006945Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Dewar Creek DC16 2012 metaGEnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009095Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009506Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8EnvironmentalOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300009852Compost microbial communities from Sao Paulo Zoo, Brazil - Zoo Compost 4 - DAY 99 miraEngineeredOpen in IMG/M
3300009854Compost microbial communities from Sao Paulo Zoo, Brazil - Zoo Compost 4 - DAY 78 miraEngineeredOpen in IMG/M
3300009868Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plantEngineeredOpen in IMG/M
3300009946Compost microbial communities from Sao Paulo Zoo, Brazil - Zoo Compost 4 - DAY 03 miraEngineeredOpen in IMG/M
3300009950Compost microbial communities from Sao Paulo Zoo, Brazil - Zoo Compost 4 - DAY 64 miraEngineeredOpen in IMG/M
3300010268Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 8_30_10_142_A2 metaGEngineeredOpen in IMG/M
3300011409Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2EnvironmentalOpen in IMG/M
3300011420Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2EnvironmentalOpen in IMG/M
3300011440Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2EnvironmentalOpen in IMG/M
3300012042Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ489 (22.06)EnvironmentalOpen in IMG/M
3300012940Organic Plus compost microbial communities from Emeryville, California, USA - Original compost - Organic plus compost (OP)EnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300014878Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200A_16_10DEnvironmentalOpen in IMG/M
3300017548Enriched Organic Plus compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 30_C Kraft OP (version 2)EnvironmentalOpen in IMG/M
3300017648Enriched Miracle-Growth compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 37_C BE-Lig MG (version 2)EnvironmentalOpen in IMG/M
3300017649Enriched Organic Plus compost microbial communities from Emeryville, California, USA - eDNA 5th pass 37_C BE-Lig OP (version 2)EnvironmentalOpen in IMG/M
3300017653Enriched backyard soil microbial communities from Emeryville, California, USA - eDNA 3rd pass 37_C BE-Lig BY (version 2)EnvironmentalOpen in IMG/M
3300017832Feedstock adapted compost microbial communities from Newby Island compost facility, Milpitas, CA, USA - Passage 4_SGEngineeredOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019228Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020599Enriched backyard soil microbial communities from Emeryville, California, USA - eDNA 5th pass 37_C BE-Lig BY (version 2)EnvironmentalOpen in IMG/M
3300022554Dewar_combined assemblyEnvironmentalOpen in IMG/M
3300025326Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025495Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025571Ionic liquid and high solid enriched microbial communities from the Joint BioEnergy Institute, USA - AR20-1-D (SPAdes)EngineeredOpen in IMG/M
3300025572Ionic liquid and high solid enriched microbial communities from the Joint BioEnergy Institute, USA - AR20-2-D (SPAdes)EngineeredOpen in IMG/M
3300026034Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_302 (SPAdes)EnvironmentalOpen in IMG/M
3300027653Agricultural soil microbial communities from Georgia to study Nitrogen management - Poultry litter 2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027664Cellulose adapted compost microbial communities from Newby Island Compost Facility, Milpitas, CA, USA - BGW Initial Compost (SPAdes)EngineeredOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028603Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138REngineeredOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030606Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125EnvironmentalOpen in IMG/M
3300030613Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031145Sorghum-adapted microbial communities from Joint BioEnergy Institute, Emeryville, California, United States - P4_Day56_Rep1EngineeredOpen in IMG/M
3300031228Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57EnvironmentalOpen in IMG/M
3300031825 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - MeOH1_35cm_T4_195EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033489Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214EnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_210542623300000033SoilMASPAIPVFLAGPYPVLHSARVDQEEQEVDLDVALLIDGQPNMLASTTFPLDETWDRIVSALTSGDARLGVAGMPHEAKSMTGAPEVFPSAYVGLECANGERLVLAHIKGLNPEQDSAAYAREVIQAIRDGATPDELGETIDEED*
JGI12419J13241_100779813300001077Feedstock Adapted CompostMDSSAIPVFLAGPFPVLHTARVLHDEQEVELDVALLIGGMPTMLAATRFPLDETWERIQRALSSGDARLAVAGVPHEAQSITGAPEIYPSAYVGLECANGERLVLAHIKGPDRQQEAEGYARSVIS
JGI12419J13241_100875323300001077Feedstock Adapted CompostMDSSAIPVFLAGPFPVLHTFRVQEIEQEVELDVALLISGIPTMLAATRFPLDDTWERIQRALSSGDARLGVAGMPHETQSITGTPEIFPSAYVGLECANGERLVLAHIKGSNREQESEAYARSVISAILEGKTPAELGEPIED*
metazooDRAFT_127426213300002205CompostMDPSAIPVFLAGPFPVLHSANVLEREAEVQLDVGLIIGGLPTILAATSFPLDETWERVEAALSSGDARLGVAGIPFQVESPLGESEIFPSAYIGLECANGERLILAHIRGLDPNQDPES
JGI25327J35509_100888263300002531Ionic Liquid And High Solid EnrichedMDPSAIPVFLAGPFPVLHSANVLDREAEVQLDVGLIIGGLPTILAATSFPLDETWDRVEAALSSGDARLGVAGIPHQVESEIGETEVFPSAYIGLECANGERLILAHIRGPDRKQDPEAYAREVIAALLNGQTPAELGELIED*
JGI1652J44930_1002033423300002963Feedstock Adapted CompostMDPSAIPVFLAGPFPVLHSANVLEREAEVQLDVGLIIGGLPTILAATSFPLDETWERVEAALSSGDARLGVAGIPHQVESPLGELEIFPSAYIGLECANGERLILAHIRGLDPDQDPESYAREVIAALLNGQSPAELGELIED*
Ga0006572J49612_105894313300003331Ionic Liquid And High Solid EnrichedMDPSAIPVFLAGPFPVLHTARIDEIESEVELDVGLIIGGLPTILAASTFPLDETWSRVEAALASGDAKLGVAGVPHEEESVIGKHEVFPSAYVGLECANGERLILAHIRGSDPAQNAEAYAREVIGALLNGQTPAELGELIED*
metazooDRAFT_150720513300003647CompostGGRGAGVGDAATRALPSSGVDMDSSAIPVFLAGPFPVLHTARVLHDEQEVELDVALLIGGMPTMLAATRFPLDETWERIQRALSSGDARLAVAGVPHEAQSITGAPEIYPSAYVGLECANGERLVLAHIKGPDRQQEAEGYARSVISAILEGRTPAELGELIED*
Ga0062590_10191142613300004157SoilMASPAIPVFLAGPFPVLHSARVDQEEKEVDLDVALLIDGQPNMLASTTFPLDDTWDRILSALTSGDARLGVAGMPHEARSMTGAPEVFPSAYVGLECANGERLVLAHIKGLDPGQDSAAYAREVIQAIREG
Ga0070924_134987113300005059CompostVLHDEQEVELDVALLIGGMPTMLAATRFPLDETWERIQRALSSGDARLAVAGVPHEAQSITGAPEIYPSAYVGLECANGERLVLAHIKGPDRQQEAEGYARSVISAILEGRTPAELGELIED*
Ga0070923_186728613300005072CompostMDSSAIPVFLAGPFPVLHTARVLHDEQEVELDVALLIGGMPTMLAATRFPLDETWERIQRALSSGDARLAVAGVPHEAQSITGAPEIYPSAYVGLECANGERLVLAHIKGPDRQQEAEGYARSVISAILEGRTPAELGELIED*
Ga0065724_11186513300005274Switchgrass Adapted CompostMDSSAIPIYMAGPFPVLYTSFINELENEVELDVALLIGGLPNMIAATRLPLDETWYRIEAALQSGDARLGVAGMPYRGESVMGVTEVYPSAYIGLECANGERLVLARIRGHDPNQEAEAYARDVIAAILKGHTPADLGEFIDV*
Ga0075276_1000452023300005898Rice Paddy SoilMDSSAIPVFLAGPFPAVHSARLDRELGEVELDVALLIGGLPTMLAATCFPLDDTWQRVETALRSGDARLGVAGMPHHAESSIGTDEVYPSAYVGLECANGERLVLAHIRGTDPSVRPDAYARRVIKEILQGRTPAELGEAVYDE*
Ga0079223_1006214933300006801Agricultural SoilMDSPPVPVFLAGPFPVIHSVTINREERDVDLDVALLIAGQPNILASTRFPLDDTWERIVTALESGDARLGVAGVPHEVDTITDGVRVYPSAYIGLECANGERLVLSHIRGLDADVDAESYAREVIDSLLQGMGPDELGECVDD*
Ga0079223_1073334713300006801Agricultural SoilAATRAFPQFGVDMDSSAIPVFLAGPFPVLHTSRVQDVEQEVELDVALLISGLPTMLAATRFPLDDTWERIQRALASGDARLGVAGMPHEAESIAGTPEVFPSAYVGLECANGERLVLAHIKGSDREQESEAYARSVISAILNGKTPADLGEPIED*
Ga0075421_10095964113300006845Populus RhizosphereMASPAIPVFLAGPYPVLHSARVDPQEQEVDLDVALLIDGQPNMLASTTFPLDDTWDRIVSALTSGDARLGVAGMPHEAKSMTGAPEVFPSAYVGLECANGERLVLAHIKGMNPAQDSAAYAREVIQAIRDGATPDEL
Ga0075421_10152816123300006845Populus RhizosphereMASPAIPVFLAGPYPVLHSARVDHQEQEVDLDVALLIDGQPNMLASTTFPLDDTWDRIVCALTSGDARLGVAGMPHEAKSMTGAPEVFPSAYVGLECANGERLVLAHIKGTNAAQDSAAYARAVIQAIREGSTPDELGETIDEED*
Ga0075430_10094577523300006846Populus RhizosphereMASPAIPVFLAGPYPVLHSARVDPQEQEVDLDVALLIDGQPNMLASTTFPLDDTWDRIVSALTSGDARLGVAGMPHEAKSMTGAPEVFPSAYVGLECANGERLVLAHIKGMNPAQDSAAYAREVIQAIRDGATPDELGETIDEED*
Ga0079225_10000887123300006851Agricultural SoilMDPSAIPVFLAGPFPVLHTARVSEIDAEVELDIGLLIGGLPTILAATAFPLDETWERVDAALASGDARLGVAGTMYEEESIVGTFDVVPTAYVGLECANGERLILAHIKSPDPDADPERYAHDVMTALLNGQTPADLGQLIEE*
Ga0079217_1112190723300006876Agricultural SoilTASPAIPVFLAGPFPVLPSASIDEFEQEVDLDVALLINGQPNMLASTTFPLDETWDRIQSALTSGDARLGVAGMPHEIRSLTGLAEVFPSAYVGLECANGERLVLAHIKGMDSEQNAEAYAREVINGILAGSSPDDLGETIDDELGETIDEDED*
Ga0079215_1033666813300006894Agricultural SoilMASPAIPVFLAGPFPVLQSARVDPAGQDVDLDVALLINGLPNILAATTFPLDDTWDRILKALTSGDAKLGVAGLPHEGKSITGQPEVFPSAYVGLECANGERLVLAHIRGLDAEQDSEAYAREVINAILTGATPDELGEIVEEDEPIGEDETAD
Ga0073933_104724423300006945Hot Spring SedimentMDSSAIPVFLAGPFPVLHSAWVQEPDGEVELDVALLIGGVPTMIAATRFPLDETWDRIRRALESGDARLGVAGVPHEEESPIGTREVYPAAYVGLECANGERLVLAHIRAPRPGMEPEAFARHVLSSILKGHTPLELGEPIEE*
Ga0079218_1162915323300007004Agricultural SoilPVFLAGPYPVLQSASIDDQESEVDLDVALLINGQPTMLASTTFPLDETWDRILTALTSGDARLGVAGMPHESKSITGAPEVFPSAYVGLECANGERLVLAHIKGLDAEQNAEAYAREVIDGIIAGATPDELGETIDDEMNETIDGEE*
Ga0105107_1009809423300009087Freshwater SedimentMDSSAIPVFLAGPFPVLFTHRVNEAEEEVELDVALLIAGQPNVLASTVFPLDASWERIRSALESGDARLGVAGMVHEEEEASGQLERYPAAYVGLECANGERLVLAHIRGLDAVQPADAYAREVIDSILQGCAPEELGLTIDE*
Ga0102851_1026468223300009091Freshwater WetlandsMDSSAIPVFLAGPFPVLFTFQVNEPEAEVELDVALLIAGLPNVLASTVFPLDAGWDRIRGALESGDARLGVAGMIHEEESAAGQPERFPAAYIGLECANGERLVLAHIRGLDPSQAPDAYAREVIDSILQGSAPEELGLTIDE*
Ga0079224_100020215123300009095Agricultural SoilMDPSAIPVFLAGPFPVLHSANVLEREAEVQLDVGLIIGGLPTILAATSFPLDETWERVEAALSSGDARLGVAGIPHQVESPLGDLEIFPSAYIGLECANGERLILAHIRGLDPNQDPESYAREVIAALLNGQSPAELGELIED*
Ga0079224_10002570953300009095Agricultural SoilMDPSAIPVFLAGPFPVLYSAHVSEADAEVQLDVGLIIGGLPTILAATEFPLDETWTRVSAALASGEARLGVAGVPHEAESLFGERQVFPSAYIGLECANGERLILAHIRGTDPDQVPEAYARDVIAALLNGQSPAELGELIED*
Ga0079224_10007103153300009095Agricultural SoilMDPSAIPVFLAGPFPVLHTSRVQDSEQEVELDIALLISGVPTMLAATRFPLDDTWERIQRALSSGDARLGVAGMPHEAESITGTTEIFPSAYVGLECANGERLVLAHIKGSDREQESEAYARSVIAAILDGKTPAELGEPIED*
Ga0079224_10028858823300009095Agricultural SoilMDPSAIPVFLAGPFPVLHSANLLDREEEVQLDVGLLIGGLPTILAATAFPLDETWERVEAALSSGDARLGVAGIPHHVESVIGEAEVFPSAYIGLECANGERLILAHIRGPDREQDAEDYAREVIAALLNGQTPAELGELIED*
Ga0079224_10041796623300009095Agricultural SoilMDSPAIPVFLAGPFPVLHTAAIREDAGEVELDVALIIAGMPNILACTCFPLDDTWDRIERALQSGDARLGVAGVPHEEEAGPGAARVFPSAYIGLECANGERLVLTHIRGLDADQNAEAYAREVIDSILMGQAPAELGLALDD*
Ga0079224_10044625623300009095Agricultural SoilMMDSPPVPVFLAGPFPVVHSIAINREECDVDLDVALLIAGQPNILASTRFPLDDTWERIVCALESGDARLGVAGVPHEVESITDGVRVFPSAYIGLECANGERLVLSHIRGLDAAVDPERYAREVIDSLLQGMGPDELGESVDD*
Ga0079224_10122707323300009095Agricultural SoilMDSSAIPVFLAGPFPVLHCANVLEREAEVQLAVGLIIGGLPTIIAATSFPLDETWERVKAALSSGDARLGVAGVPHQVESPLGEPVIYPSAYIGLECANGERLILAHIRGLDPNQDPESYAREVIAALLNGQSPVELGELIED*
Ga0079224_10228012013300009095Agricultural SoilMMDSPSVPVFLAGPFPVIHSIAINREERDVDLDVALLIAGQPNILASTRFPLDDTWERIVNALESGDARLGVAGVPHEVESVTDGARVFPSAYIGLECANGERLVLSHIRGLDAEVDPERYAREVIDSLLQGMGPDELGENVED*
Ga0111538_1194541913300009156Populus RhizosphereMASPAIPVFLAGPFPVLHSARVDHDEQEVDLDVALLIDGQPNMLASTTFPLDDTWDRILSALTSGDARLGVAGMPHESRSMTGTPEVFPSAYVGLECANGERLVLAHIKGKNPEQDSAAYARAVIQAIRDGSTPDELGETIDEED*
Ga0118657_1002694463300009506Mangrove SedimentMDSSAIPVFLAGPFPVLFTFRVDELEEEVELDVALLIAGLPNVLASTAFPLDAGWERIRGALESGDARLGVAGMVHEEESVAGALERFPSAYIGLECANGERLVLAHIRGLDALQAPDVYAREVIDSILQGSAPEELGLTIDE*
Ga0105347_122882213300009609SoilMASPAIPVFTAGPFPVLQSSRVNSGEREVDLDVALLIKGQPNILASTTFPLDDTWERILSALTSGDAKLGVAGMPHTGQSLAGQEEVFPSAYVGLECANGERLVLAHIKGLDTEQESEAYAREVINAILSGATPDE
Ga0131851_101379023300009852CompostMDSSAIPVFLAGPFPVLHCANVLEREAEVQLDVGLIIGGLPTIIAATSFPLDETWERVKAALSSGDARLGVAGVPHQVESPLGEPVIYPSAYIGLECANGERLILAHIRGLDPNQDPESYAREVIAALLNGQSPAELGELIED*
Ga0131850_100366633300009854CompostMDSSAIPVFLAGPFPVLHCANVLEREAEVQLDVGLIIGGLPTIIAATSFPLDETWERVKAALSSGDARLGVAGVPHQVESPLGEPVIYPSAYIGLECANGERLILAHIRGLDPNQDPESYAREVIAALLNGQSPVELGELIED*
Ga0131850_105848323300009854CompostPTILAATSFPVDETWERVEAALSSGDARLGVAGIPHQVESPLGDLEIFPSAYIGLECANGERLILAHIRGLDPNQDPESYAREVIAALLNGQSPAELGELIED*
Ga0130016_1002506963300009868WastewaterMAPELMMDSPPVPVFLAGPFPVVHSIAINREERDVDLDVALLIAGQPNILASTRFPLDDTWERIVYALESGDARLGVAGVPHEVESITDGVRVFPSAYIGLECANGERLVLSHIRGLDAAVDAESYAREVIDALLQGMGPDELGECVDD*
Ga0130016_1019720123300009868WastewaterMMDSPPVPVFLAGPFPVVHSIAINREECDVDLDVALLIAGQPNILASTRFPLDDTWERIVCALESGDARLGVAGVPHEVESITDGVRVFPSAYIGLECANGERLVLSHIRGLDAAVDAESYAREVIDSLLQGMGPDELGESVDD*
Ga0131844_14463913300009946CompostMDSSAIPVFLAGPFPVLHTARVLHDEQEVELDVALLIGGMPTMLAATRFPLDETWERIQRALSSGDARLAVAGVPHEAQSITGAPEIYPXAYVGLECANGERLVLAHIKGPDRQQEAEGYARSVISAILEGRTPAELGELIED*
Ga0131848_100108933300009950CompostMDSSAIPVFLAGPFPVLHTARVLHDEQEVELDVALLIGGMPTMLAATRFPLDETWERIQRALSSGDARLAVAGVPHEAQSITGAPEIHPSAYVGLECANGERLVLAHIKGPDRQQEAEGYARSVISAILEGRTPAELGELIED*
Ga0134097_104802023300010268Switchgrass DegradingMDPRSVRVRFESALELHMDPSAIPVFLAGPFPVLHSARVDDVLEEVDLDVALLISGMPTMIAETTFDLDDTWERVRNALASGDARLGVAGALHEEESELGVREVFPAAYVGLECANGERLVLAHIRSVEAGRDADAYAREVIAAILEGQTPGELGVFVDD*
Ga0137323_110266913300011409SoilMASPAIPVFTAGPFPVLQSSRVNSGEREVDLDVALLIKGQPNILASTTFPLDDTWERILSALTSGDAKLGVAGMPHTGQSLAGQEEVFPSAYVGLECANGERLVLAHIK
Ga0137314_106394223300011420SoilPFPVLQSSRVNSGEREVDLDVALLIKGQPNILASTTFPLDDTWERILSALTSGDAKLGVAGMPHTGQSLAGQEEVFPSAYVGLECANGERLVLAHIKGLDTEQESEAYAREVINAILSGATPDELGETIEDED*
Ga0137433_113614813300011440SoilTVVTGTKRRSWTMASPAIPVFTAGPFPVLQSSRVNSGEREVDLDVALLIKGQPNILASTTFPLDDTWERILSALTSGDAKLGVAGMPHTGQSLAGQEEVFPSAYVGLECANGERLVLAHIKGLDTEQESEAYAREVINAILSGATPDELGETIEDED*
Ga0136627_125408313300012042Polar Desert SandMDSSAIPVFLAGPFPVVYTCNVDCTENEVELDVALLIAGLPNILASTMFPLDDTWERVRLALESGDARLGVAGMRYEEEAPDGEATLFPSAYIGLECANGERLVLAHIRGMDDTQEPDVYAREVIDALLQGCAPDDLGVTIDD*
Ga0164243_1003485943300012940CompostMDSAIPVFLAGPFPVIHTARVLEIEQEVELDVALLINGLPNMLASTAFPLDDSWGRIQSALNSGDARLAVAGIPYETTSASGRAETFPSAYVGMECANGERLVLAHIKGMDAEQQAEAYAREVINAILDGNSPVDLGETIED*
Ga0164243_1037902523300012940CompostMDSAIPVFLAGPFPVIHTARVLEFEQEVELDVALLINGLPNMLASTAFPLDESWGRIETALNSGDARLAVAGMPHETTSASGRTETFPSAYVGMECANGERLVLAHIKGVDAGQQAEAYAREVINAILDGNSPVDLGETIED*
Ga0153916_1287660013300012964Freshwater WetlandsMDSSAIPVFLAGPFPVLFTFRVDEPEEEVELDVALLIAGLPNVLASTVFPLDAGWERIRGALESGDARLGVAGTLHEEESAAGQSEHFPAAYIGLECANGERLVLAHIRGIDPLQPPDAYAREVIDSLLQGSAPEELGLAIDE*
Ga0180065_111578413300014878SoilREVDLDVALLIKGQPNILASTTFPLDDTWERILSALTSGDAKLGVAGMPHTGQSLAGQEEVFPSAYVGLECANGERLVLAHIKGLDTEQESEAYAREVINAILSGATPDELGETIEDED*
Ga0182743_100640533300017548CompostMSSPAIPVFSAGPFPVLKSVRIDEIDNEVELDVALLIQGQPNIIASSRFPLDDTWERIVKALTSGPARLGVAGIPHQVKTSVGIEEVYPSAYVGLECGNGERLVLAHIKGLNAEQPADAYAREVIHAILDGAGPDELGENIDDE
Ga0180216_1000859273300017648CompostMDPSAIPVFLAGPFPVIHSARIRPVEEEIELDVGLIIGGLPSILAATVFPLDDSWERVNAALASGDARLGVAGMLHEQESPTGEFEVFPSAYVGLECANGERLILAHIRSPDPDQEPEAFAREVIAALLNGQTPADLGELIDD
Ga0182741_118557123300017649CompostEQEVELDVALLINGLPNMLASTAFPLDDSWERIQAALDSGDARLAVAGMPYETTSASGRAETFPSAYVGMECANGERLVLAHIKGVDAEQQAEAYAREVINAILDGNSPVDLGETIED
Ga0180215_118761323300017653SoilMDSAIPVFLAGPFPVIHTARVLEFEQEVELDVALLINGLPNMLASTAFPLDDSWERIQAALDSGDARLAVAGMPYETTSASGRAETFPSAYVGMECANGERLVLAHIKGVDAEQQAEAYAREVINAILDGNSPVDLGETIED
Ga0181858_101203633300017832Feedstock Adapted CompostMDSSAIPVFLAGPFPVLHTARVLHDEQEVELDVALLIGGMPTMLAATRFPLDETWERIQRALSSGDARLAVAGVPHEAQSITGAPEIYPSAYVGLECANGERLVLAHIKGPDRQQEAEGYARSVISAILEGRTPAELGELIED
Ga0181858_102679223300017832Feedstock Adapted CompostMDPSAIPVFLAGPFPVLHSANVLEREAEVQLDVGLIIGGLPTILAATSFPLDETWERVEAALSSGDARLGVAGIPHQVESPLGDLEIFPSAYIGLECANGERLILAHIRGLDPNQDPESYAREVIAALLNGQSPAELGELIED
Ga0190265_1309305513300018422SoilMASPAIPVFLAGPFPVLQSASIDEQEHEVDLDVALLINGQPNMLASTTFPLDETWDRILNALTSGDARLGVAGMPHESRSLTGLPEVFPSAYVGLECANGERLVLAHIKGLDSEQNAEAYARDVINGILGGSTPDELGETIDDELGETIDEDED
Ga0190270_1324846513300018469SoilMASPAIPVFLAGPFPVLQSARVDPAGQDIDLDVALLINGLPNILAATTFPLDDTWDRILKALTSGDAKLGVAGLPHEGRSITGQPEVFPSAYVGLECANGERLVLAHIRGLDSEQDSEAYAREVINAILTGAAPDELGEIVEEDEP
Ga0180119_107514213300019228Groundwater SedimentMASPAIPVFTAGPFPVLQSSRVNSGEREVDLDVALLIKGQPNILASTTFPLDDTWERILSALTSGDAKLGVAGMPHTGQSLAGQEEVFPSAYVGLECANGERLVLAHIKGLDTEQESEAYAREVINAILSGATPDELGETIE
Ga0180220_1000099533300020599SoilMDSPPVPVFLAGPFPVIHSVTINREERDVDLDVALLIAGQPNILASTRFPLDDTWERIVTALESGDARLGVAGVPHEVDTITDGVRVYPSAYIGLECANGERLVLSHIRGLDADVDAESYAREVIDSLLQGMGPDELGECVDD
Ga0180220_100232063300020599SoilMDPSAIPVFLAGPFPVIHSARIRPVEEEIELDVGLIIGGLPSILAATVFPLDDSWERVDAALASGDARLGVAGMLHEQESPTGEFEVFPSAYVGLECANGERLILAHIRSPDPDQEPEAFAREVIAALLNGQTPADLGELIDD
Ga0212093_104816723300022554Hot Spring SedimentMDSSAIPVFLAGPFPVLHSARVQEPDGEVELDVALLIGGMPTMIAATRFPLDETWDRIRRALESGDARLGVAGVPHEEESPIGTREVYPAAYVGLECANGERLVLAHIRAPRPGMEPEAFARHVLSSILKGHTPLELGEPIEE
Ga0209342_1024647523300025326SoilMDSSAIPVFLAGPFPVLFTFRVDKLEEEVELDVALVIAGLPNVLASTLFPLDDSWERMRGALESGDARLGVAGMVHEEESMAGQLDRFPAAYVGLECANGERLVLAHIRGLDSVQPPDAYAREVIDSILQGSAPEELGLTIDE
Ga0207932_102726423300025495Arctic Peat SoilMDSSAIPVFLAGPFPVVHSARLDHEESNVELDVALLIGGLPTMLAATCFPLDETWERVELALESGDARLGVAGMPHHSEDELSDESYPSAYVGLECANGERLVLAHIRGSDAAVRPEVYARRVIRSILQGRTPAELGEPVFDE
Ga0207874_103967923300025571Ionic Liquid And High Solid EnrichedMDSSAIPVFLAGPFPVLHTARVMHDEQEVELDVALLIGGLPTMLVATRFPLDDTWERIQRALTSGDARLGVAGVPHEAQSITGAPEIFPSAYVGLECANGERLVLAHIKGSDREQEAEAFARSVIAAILEGKTPAELGELIED
Ga0207874_105967223300025571Ionic Liquid And High Solid EnrichedMDSSAIPVFLAGPFPVLHTFRVQEIEQEVELDVALLISGIPTMIAATRFPLDDTWERIQRALSSGDARLGVAGMPHETQSITGAPEIFPSAYVGLECANGERLVLAHIRGLNREQESEAY
Ga0207864_1000451213300025572Ionic Liquid And High Solid EnrichedMDPSAIPVFLAGPFPVLHSANVLDREAEVQLDVGLIIGGLPTILAATSFPLDETWDRVEAALSSGDARLGVAGIPHQVESEIGETEVFPSAYIGLECANGERLILAHIRGPDRKQDPEAYAREVIAALLNGQTPAELGELIED
Ga0207864_103131523300025572Ionic Liquid And High Solid EnrichedMDSSAIPVFLAGPFPVLHTFRVQEIEQEVELDVALLISGIPTMIAATRFPLDDTWERIQRALSSGDARLGVAGMPHETQSITGAPEIFPSAYVGLECANGERLVLAHIRGLNREQES
Ga0208773_103831913300026034Rice Paddy SoilMDSSAIPVFLAGPFPVVHSARLDRELGEVELDVALLIGGLPTMLAATCFPLDDTWERVETALRSGDARLGVAGMPHHAESSIGTDEVYPSAYVGLECANGERLVLAHIRGTDPSVRPDAYARRVIKEILQGRTPAELGEAVYDE
Ga0209487_1000127343300027653Agricultural SoilMDPSAIPVFLAGPFPVLHTARVSEIDAEVELDIGLLIGGLPTILAATAFPLDETWERVDAALASGDARLGVAGTMYEEESIVGTFDVVPTAYVGLECANGERLILAHIKSPDPDADPERYAHDVMTALLNGQTPADLGQLIEE
Ga0207873_1000655193300027664Feedstock Adapted CompostMDPSAIPVFLAGPFPVLHSANVLEREAEVQLDVGLIIGGLPTILAATSFPLDETWERVEAALSSGDARLGVAGIPHQVESPLGELEIFPSAYIGLECANGERLILAHIRGLDPDQDPESYAREVIAALLNGQSPAELGELIED
Ga0207873_100181473300027664Feedstock Adapted CompostMDSSAIPVFLAGPFPVLHTFRVQEIEQEVELDVALLISGIPTMLAATRFPLDDTWERIQRALSSGDARLGVAGMPHETQSITGTPEIFPSAYVGLECANGERLVLAHIKGSNREQESEAYARSVISAILEGKTPAELGEPIED
Ga0207873_103697023300027664Feedstock Adapted CompostMDSSAIPVFLAGPFPVIYTYRVREAEREVELDVALLISGMPTMLAATRFPLDDTWERIRAALDSGDARLGVAGVPHEAESLFGTPEIFPSAYVGLECANGERLVLAHIRGSDREQQSESYARSVIAAILQGHTPADLGEPIDA
Ga0207873_106141623300027664Feedstock Adapted CompostMDPSAIPVFLAGPFPVLHSANVLDREAEVQLDVGLIIGGLPTILAATSFPLDETWERVEAALSSGDARLGVAGIPHQVESEIGETEVFPSAYVGLECANGERLILAHIRGPDRKQDPEAYAREVIAALLNGQTPA
Ga0209382_1083817523300027909Populus RhizosphereMASPAIPVFLAGPYPVLHSARVDPQEQEVDLDVALLIDGQPNMLASTTFPLDDTWDRIVSALTSGDARLGVAGMPHEAKSMTGAPEVFPSAYVGLECANGERLVLAHIKGMNPAQDSAAYAREVIQAIRDGATPDELGETIDEED
Ga0209382_1117205313300027909Populus RhizosphereMASPAIPVFLAGPYPVLHSARVDHQEQEVDLDVALLIDGQPNMLASTTFPLDDTWDRIVCALTSGDARLGVAGMPHEAKSMTGAPEVFPSAYVGLECANGERLVLAHIKGTNAAQDSAAYARAVIQAIREGSTPDELGETIDEED
Ga0265293_1010154423300028603Landfill LeachateMPHRVGRPTFMAPELMMDSPPVPVFLAGPFPVVHSIAINREERDVDLDVALLIAGQPNILASTRFPLDDTWERIVYALESGDARLGVAGVPHEVESITDGVRVFPSAYIGLECANGERLVLSHIRGLDAAVDAESYAREVIDALLQGMGPDELGECVDD
Ga0299907_1131437613300030006SoilVVPDGASGAGWRTRSWLLMDSPAIPVFLAGPFPVLQTHVLDETEGEVELDVALLIAGLPNLIASTVFPLDDTWERILSALESGDARLGVAGVPHEDASPLGEPTSYPSAYVGLECANGERLVLTHIRGLDSAQNPEAYAREVIDSILQGHAPDELGITIDD
Ga0299906_1088177513300030606SoilMAPGYGVRNRMRSTELRLMDSPAIPVFLAGPFPVLQTHLLDHAEGEVELDVALLIAGLPNLIASTVFPLDETWGRILSALKSGDARLGVAGVPHEDDSPLGEPLSYPSAYVGLECANGERLVLTHIRGLDAAQNPEAYAREVIDSILQGHAPEELGLT
Ga0299915_1009390233300030613SoilDAALSAEPEQDVDKSAIPVFLAGPFPVLFTFRVDELEEEVELDVALLIAGLPNVLASTVFPLDAGWDRIRGALESGDARLGVAGVVHEEESVAGQLERFPSAYIGLECTNGERLVLAHIRGLDALQAPDAYAREVIDSLLQGSAPEELGLTIDE
Ga0302046_1000928753300030620SoilMDTPAIPVFLAGPFPVLQHHKLDEDVFEVELDVALLISGLPSIIASSIFPLDETWERVLAALRSGDARLGVAGVPHPSDSDVGEPMVYPSAFIGLECANGERLVLSHIRGLDSTQDAESYAREVIDSVLLGHSPEELGVTIDD
Ga0310821_1000203063300031145Growth MediumMDPSAIPVFLAGPFPVLHTARIDEIESEVELDVGLIIGGLPTILAASTFPLDETWSRVEAALASGDAKLGVAGVPHEEESVIGKHEVFPSAYVGLECANGERLILAHIRGSDPAQNAEAYAREVIGALLNGQTPAELGELIED
Ga0299914_1015493913300031228SoilMDSPAIPVFLAGPFPVLHTAVVREDVGEVELDVALIIAGLPNILACTCFPLDDTWDRIQEALQSGDARLGVAGVPHEEDEDLSGPLVFPSAYIGLECANGERLVLTHIRGLDAGQQPEAYAREVIDSILQGQAPAELGLALDD
Ga0299914_1066128523300031228SoilMDSPAIPVFLAGPFPVLQTHVLDETEGEVELDVALLIAGLPNLIASTVFPLDDTWERILSALESGDARLGVAGVPHEDASPLGEPTSYPSAYVGLECANGERLVLTHIRGLDSAQNPEAYAREVIDSILQGHAPDELGITIDD
Ga0299914_1078956313300031228SoilMDSPAIPVFLAGPFPVLQTHLLDEAEGEVELDVALLIAGLPNLIASTVFPLDETWDRILSALKSGDARLGVAGVPHEDDSPLGEPTSYPSAYVGLECANGERLVLTHIRGLDDSQNPEAYAREVIDSILQGHAPEELGLTIDD
(restricted) Ga0255338_100966353300031825Sandy SoilMDSAIPVFLAGPFPVLHTARLLDIEQEVELDVALLINGLPNMLASTAFPLDDSWSRIESALSSGDARLAVAGMPYETTSASGRPETFPSAYVGMECANGERLVLAHIKGMDAEQQAEAYAREVINAILDGNSPVDLGETIED
(restricted) Ga0255338_106030023300031825Sandy SoilMDSAIPVFLAGPFPVLHTARLLDIEQEVELDVALLINGLPNMLASTAFPLDDSWSRIESALSSGDARLAVAGMPYETTSASGRTETFPSAYVGMECANGERLVLAHIKGMDAEQQAEAYAREVINAILDGNS
Ga0310892_1092873213300031858SoilMDSSAIPVFLAGPFPVLHTSRVQDAEQEVELDVALLISGLPTMLAATRFPLDDTWERIQRALASGDARLGVAGMPHEAESIAGTPEVFPSAYVGLECANGERLVLAHIKGSDREQESEAYARSVISAILNGKTPAELGEPIED
Ga0214473_10002489123300031949SoilMDSSAIPVFLAGPFPVLHTWRIDDVDAEVELDVALLIAGLPNRLASTQFPLDDTWNRIRDALGSGDARLGVAGLPHEGHSVMGTPEIFPSAYIGLECSNGERLVLSHIRGMDSGQQAEAYAREVMDALLQGLSPEELGVAVDD
Ga0214473_1045071823300031949SoilMDSSAIPVFLAGPFPVLFTFRVDEAEEEVELDVALLIAGLPNVLASTVFPLDDAWERIRGALESGDARLGVAGMVHEEESDVGQPERFPSAYVGLECANGERLVLTHIRGLDGLQAPDAYAREVIDSILQGCAPEELGLTIDE
Ga0315910_1141924723300032144SoilEEQEVDLDVALLIDGQPNMLASTTFPLDETWDRIVSALTSGDARLGVAGMPHEAKSMTGAPEVFPSAYVGLECANGERLVLAHIKGLNPEQDSAAYAREVIQAIRDGATPDELGETIDED
Ga0315912_1017128923300032157SoilMASPAIPVFLAGPYPVLHSARVDQEEQEVDLDVALLIDGQPNMLASTTFPLDETWDRIVSALTSGDARLGVAGMPHEAKSMTGAPEVFPSAYVGLECANGERLVLAHIKGLNPEQDSAAYAREVIQAIRDGATPDELGETIDEDD
Ga0335080_1017807623300032828SoilMDSSAIPVFLAGPFPVIHSARIDRELAEVELDVALLIGGLPTMLAATSFPLDDTWERVELALQSGDARLGVAGMPHHSESSIGMEEVYPSAYVGLECANGERLVLAHIRGMDSSVRADVYARRVIKEILQGHTPAELGEPVYDD
Ga0335084_1057755413300033004SoilMDSSAIPVFLAGPFPVIHSARIDRELAEVDLDVALLIGGLPTMLAATSFPLDDTWERVELALQSGDARLGVAGMPHHAESSIGMCEIYPSAYVGLECANGERLVLAHIRGMDCSVRADAYARRVIKEILQGHTPAELGEPVYDD
Ga0326726_1000607023300033433Peat SoilMDPSAIPVFLAGPFPVLHSARIDQELSEVELDVALLIGGLPTMLAATCFPLDDTWERVETALASGDARLGVAGMPYHSENAIGTDEVFPSAYVGLECANGERLVLAHIRGSDSTVRSDAYARRVIKEILQGRTPAELGEAVYDE
Ga0316620_1162771813300033480SoilMDSSAIPVFLAGPFPVIHSARLDRELAEVELDVALLIGGLPTMLAATCFPLDDTWDRVESALRSGDARLGVAGMPHRAESSIGTDEVFPSAYVGLECANGERLVLAHIRGTDASVRPDAYARRVIKEILQGRTPAELGEAVYDE
Ga0316624_1196713513300033486SoilMDPSAIPVFLAGPFPVLHSARVDQELSEVELDVALLIGGLPTMLAATCFPLDDTWERVETALASGDARLGVAGMPHHSENAIGTDEIFPSAYVGLECANGERLVLAHIRGSDSTVRSDAY
Ga0299912_1004958223300033489SoilVDKSAIPVFLAGPFPVLFTFRVDELEEEVELDVALLIAGLPNVLASTVFPLDAGWDRIRGALESGDARLGVAGVVHEEESVAGQLERFPSAYIGLECTNGERLVLAHIRGLDALQAPDAYAREVIDSLLQGSAPEELGLTIDE
Ga0316628_10122803823300033513SoilMDSSAIPVFLAGPFPVLFTFRVDEAEEEVELDVALLIAGLPNVLAATVFPLDAGWDRIRGALESGDARLGVAGVVHEEESAAGTSERFPAAYIGLECANGERLVLAHIRGLDAEQPADAYAREVIDSILQGSAPEELGLTIDE
Ga0316628_10129331823300033513SoilMDPSAIPVFMAGPFPVLHTARLDRELSEVDLDVAVLIGGLPTMLAATSFPLDDTWERVESALESGDARLGVAGMPHRSETPFGADEVYPSAYVGLECANGERLVLAHIRGTDPAIRPDAYARSVIKEILQGRTPAELGEAVYDD
Ga0316616_10013893133300033521SoilMDSSAIPVFLAGPFPVLFTFQVNEPEAEVELDVALLIAGLPNVLASTVFPLDAGWDRIRGALESGDARLGVAGMIHEEESAAGQPERFPAAYIGLECANGERLVLAHIRGLDPSQAPDAYAREVIDSILQGSAPEELGLTIDE

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Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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