NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F101265

Metagenome / Metatranscriptome Family F101265

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F101265
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 56 residues
Representative Sequence GNEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTSSSEIAETN
Number of Associated Samples 94
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 5.88 %
% of genes near scaffold ends (potentially truncated) 85.29 %
% of genes from short scaffolds (< 2000 bps) 93.14 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (82.353 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(12.745 % of family members)
Environment Ontology (ENVO) Unclassified
(65.686 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(97.059 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 16.07%    β-sheet: 35.71%    Coil/Unstructured: 48.21%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF01527HTH_Tnp_1 1.96
PF13683rve_3 1.96
PF05430Methyltransf_30 0.98
PF07045DUF1330 0.98
PF02548Pantoate_transf 0.98
PF03466LysR_substrate 0.98
PF01084Ribosomal_S18 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0238Ribosomal protein S18Translation, ribosomal structure and biogenesis [J] 0.98
COG0413Ketopantoate hydroxymethyltransferaseCoenzyme transport and metabolism [H] 0.98
COG4121tRNA U34 5-methylaminomethyl-2-thiouridine-forming methyltransferase MnmCTranslation, ribosomal structure and biogenesis [J] 0.98
COG5470Uncharacterized conserved protein, DUF1330 familyFunction unknown [S] 0.98


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A82.35 %
All OrganismsrootAll Organisms17.65 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10063375All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1760Open in IMG/M
3300001353|JGI20159J14440_10007279All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → Maritimibacter alkaliphilus6388Open in IMG/M
3300001963|GOS2229_1010261Not Available1746Open in IMG/M
3300002646|Ga0005265J37294_100031Not Available541Open in IMG/M
3300002682|Ga0005230J37285_103037Not Available539Open in IMG/M
3300002686|Ga0005232J37287_104493Not Available516Open in IMG/M
3300002688|Ga0005227J37284_1001670Not Available542Open in IMG/M
3300002692|Ga0005226J37279_1000157Not Available535Open in IMG/M
3300002884|Ga0005253J43195_1002525Not Available542Open in IMG/M
3300002885|Ga0005267J43198_1001635Not Available540Open in IMG/M
3300003294|Ga0006245J48900_100791Not Available551Open in IMG/M
3300003299|Ga0006244J48909_1000784Not Available559Open in IMG/M
3300003301|Ga0005239J48904_1000013Not Available535Open in IMG/M
3300003549|Ga0008452J51689_102556Not Available550Open in IMG/M
3300003553|Ga0008454J51686_101344Not Available545Open in IMG/M
3300003566|Ga0008455J51687_1001840Not Available537Open in IMG/M
3300003683|Ga0008459J53047_1015239Not Available507Open in IMG/M
3300004097|Ga0055584_100579134Not Available1171Open in IMG/M
3300004636|Ga0066622_1170967Not Available534Open in IMG/M
3300006356|Ga0075487_1505023Not Available534Open in IMG/M
3300006382|Ga0075494_1420839Not Available500Open in IMG/M
3300006384|Ga0075516_1025954Not Available525Open in IMG/M
3300006393|Ga0075517_1576841Not Available526Open in IMG/M
3300006399|Ga0075495_1091144Not Available531Open in IMG/M
3300006400|Ga0075503_1010222Not Available534Open in IMG/M
3300006402|Ga0075511_1091880Not Available543Open in IMG/M
3300006404|Ga0075515_10968057Not Available533Open in IMG/M
3300006405|Ga0075510_10031111Not Available555Open in IMG/M
3300006602|Ga0075484_1480921Not Available514Open in IMG/M
3300006706|Ga0005505_1014289Not Available559Open in IMG/M
3300007615|Ga0102773_1028215Not Available530Open in IMG/M
3300008598|Ga0103935_11448Not Available532Open in IMG/M
3300008601|Ga0103933_14404Not Available531Open in IMG/M
3300008690|Ga0103947_10951Not Available530Open in IMG/M
3300008693|Ga0103943_12729Not Available545Open in IMG/M
3300008791|Ga0103696_1032824Not Available567Open in IMG/M
3300008791|Ga0103696_1034279Not Available555Open in IMG/M
3300008919|Ga0103484_1012216Not Available549Open in IMG/M
3300008922|Ga0103487_1013055Not Available554Open in IMG/M
3300008955|Ga0104273_101402Not Available549Open in IMG/M
3300008958|Ga0104259_1030930Not Available559Open in IMG/M
3300008993|Ga0104258_1080592Not Available607Open in IMG/M
3300008993|Ga0104258_1094234Not Available560Open in IMG/M
3300009071|Ga0115566_10094523All Organisms → cellular organisms → Bacteria1933Open in IMG/M
3300009074|Ga0115549_1015940All Organisms → cellular organisms → Bacteria → Proteobacteria3112Open in IMG/M
3300009077|Ga0115552_1072764All Organisms → cellular organisms → Bacteria1525Open in IMG/M
3300009077|Ga0115552_1120115All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1121Open in IMG/M
3300009433|Ga0115545_1040139Not Available1839Open in IMG/M
3300009433|Ga0115545_1182690All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria720Open in IMG/M
3300009443|Ga0115557_1151900All Organisms → cellular organisms → Bacteria936Open in IMG/M
3300009447|Ga0115560_1030150Not Available2551Open in IMG/M
3300009543|Ga0115099_10593539Not Available535Open in IMG/M
3300009592|Ga0115101_1007760Not Available541Open in IMG/M
3300009599|Ga0115103_1242853Not Available528Open in IMG/M
3300012470|Ga0129329_1009147Not Available517Open in IMG/M
3300012523|Ga0129350_1142689Not Available503Open in IMG/M
3300012528|Ga0129352_10670297Not Available526Open in IMG/M
3300016703|Ga0182088_1249636Not Available547Open in IMG/M
3300016726|Ga0182045_1025478Not Available520Open in IMG/M
3300016731|Ga0182094_1131421Not Available506Open in IMG/M
3300016766|Ga0182091_1149174Not Available544Open in IMG/M
3300016791|Ga0182095_1911686Not Available506Open in IMG/M
3300018642|Ga0188867_1008306Not Available530Open in IMG/M
3300019077|Ga0188868_1002571Not Available532Open in IMG/M
3300019196|Ga0182087_1159309Not Available607Open in IMG/M
3300019200|Ga0180036_1081999Not Available539Open in IMG/M
3300020013|Ga0182086_1074579Not Available541Open in IMG/M
3300020166|Ga0206128_1019001All Organisms → cellular organisms → Bacteria → Proteobacteria3966Open in IMG/M
3300020166|Ga0206128_1058553All Organisms → cellular organisms → Bacteria1829Open in IMG/M
3300020169|Ga0206127_1063919Not Available1752Open in IMG/M
3300021169|Ga0206687_1104360Not Available547Open in IMG/M
3300021291|Ga0206694_1016264Not Available534Open in IMG/M
3300021299|Ga0210302_1040448Not Available532Open in IMG/M
3300021305|Ga0210296_1008784Not Available543Open in IMG/M
3300021323|Ga0210295_1180283Not Available538Open in IMG/M
3300021334|Ga0206696_1433796Not Available543Open in IMG/M
3300021336|Ga0210307_1157935Not Available515Open in IMG/M
3300021345|Ga0206688_10472518Not Available517Open in IMG/M
3300021350|Ga0206692_1092422Not Available527Open in IMG/M
3300021350|Ga0206692_1150502Not Available538Open in IMG/M
3300021375|Ga0213869_10094536All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1465Open in IMG/M
3300021958|Ga0222718_10453182Not Available630Open in IMG/M
3300022372|Ga0210293_114356All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales791Open in IMG/M
3300022372|Ga0210293_124830Not Available587Open in IMG/M
3300022374|Ga0210311_1044136Not Available540Open in IMG/M
3300022375|Ga0210313_1043434Not Available538Open in IMG/M
3300023679|Ga0232113_1035043Not Available549Open in IMG/M
3300023685|Ga0228686_1057089Not Available538Open in IMG/M
3300023701|Ga0228685_1067072Not Available546Open in IMG/M
3300025654|Ga0209196_1115042All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria780Open in IMG/M
3300025658|Ga0209659_1178911Not Available612Open in IMG/M
3300025684|Ga0209652_1023524All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales2927Open in IMG/M
3300025869|Ga0209308_10232260Not Available800Open in IMG/M
3300025886|Ga0209632_10039083All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales3152Open in IMG/M
3300025886|Ga0209632_10086753All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1864Open in IMG/M
3300025894|Ga0209335_10027066All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae3896Open in IMG/M
3300025897|Ga0209425_10115790All Organisms → cellular organisms → Bacteria1558Open in IMG/M
3300026403|Ga0247557_1040138Not Available546Open in IMG/M
3300028290|Ga0247572_1035225Not Available1160Open in IMG/M
3300028330|Ga0247601_1054251Not Available541Open in IMG/M
3300028334|Ga0247597_1059940Not Available522Open in IMG/M
3300032153|Ga0073946_1057771Not Available560Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous12.75%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater11.76%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine10.78%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine9.80%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine8.82%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater7.84%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh6.86%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine5.88%
Ocean WaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water4.90%
Coastal WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Coastal Water3.92%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine2.94%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.94%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater2.94%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake1.96%
Bay WaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Bay Water1.96%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean0.98%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.98%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.98%
Ocean WaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water0.98%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300001353Pelagic Microbial community sample from North Sea - COGITO 998_met_09EnvironmentalOpen in IMG/M
3300001963Marine microbial communities from Nags Head, North Carolina, USA - GS013EnvironmentalOpen in IMG/M
3300002646Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI075_10m (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300002682Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI072_120m_B (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300002686Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI072_135m_B (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300002688Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI072_100m_A (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300002692Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI072_10m (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300002884Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI074_100m_A (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300002885Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI075_100m_B (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300003294Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome C0912_C27A4_35 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300003299Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome C0912_C43A7_35 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300003301Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI073_10m (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300003549Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_08_M0_20 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300003553Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_18_M0_10 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300003566Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_07_M0_10 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300003683Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_54_BLW_10 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004636Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI048_150m_RNA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006356Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006382Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006384Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006393Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006399Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006400Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006402Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006404Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006405Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006602Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006706Marine microbial communities from the Deep Indian Ocean - MP0958 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007615Marine microbial communities from the Southern Atlantic ocean - KN S14 DCM2_A metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300008598Planktonic microbial communities from coastal waters of California, USA - Canon-40EnvironmentalOpen in IMG/M
3300008601Planktonic microbial communities from coastal waters of California, USA - Canon-36EnvironmentalOpen in IMG/M
3300008690Planktonic microbial communities from coastal waters of California, USA - Canon-57EnvironmentalOpen in IMG/M
3300008693Planktonic microbial communities from coastal waters of California, USA - Canon-50EnvironmentalOpen in IMG/M
3300008791Microbial communities from seawater in eastern North Pacific Ocean - P1 free-living McLaneEnvironmentalOpen in IMG/M
3300008919Microbial communities of nutrient treated water from Blanes Bay, Barcelona, Spain - NA1EnvironmentalOpen in IMG/M
3300008922Microbial communities of nutrient treated water from Blanes Bay, Barcelona, Spain - NB2EnvironmentalOpen in IMG/M
3300008955Marine bacterioplankton communities from the North Sea island Helgoland off the German coast - probe E228EnvironmentalOpen in IMG/M
3300008958Marine microbial communities from eastern North Pacific Ocean - P1 particle-associatedEnvironmentalOpen in IMG/M
3300008993Marine microbial communities from eastern North Pacific Ocean - P1 free-livingEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009443Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421EnvironmentalOpen in IMG/M
3300009447Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509EnvironmentalOpen in IMG/M
3300009543Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009592Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009599Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012470Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012523Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012528Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016703Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041407CT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016726Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011504BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016731Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412AT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016766Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041409AS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016791Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412BS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300018642Metatranscriptome of marine microbial communities from Baltic Sea - GS695_0p1EnvironmentalOpen in IMG/M
3300019077Metatranscriptome of marine microbial communities from Baltic Sea - GS695_0p8EnvironmentalOpen in IMG/M
3300019196Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041406BS (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019200Estuarine microbial communities from the Columbia River estuary - R.1175 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020013Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041406CT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020166Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1EnvironmentalOpen in IMG/M
3300020169Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1EnvironmentalOpen in IMG/M
3300021169Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021291Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 100m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021299Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1034 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021305Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R868 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021323Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R9.63AS (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021334Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 500m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021336Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1073 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021345Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021350Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300022372Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R8.46A (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022374Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1166 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022375Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1183 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023679Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 32R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023685Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 50R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023701Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 47R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025654Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509 (SPAdes)EnvironmentalOpen in IMG/M
3300025658Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_10m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025684Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025869Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)EnvironmentalOpen in IMG/M
3300025886Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025894Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)EnvironmentalOpen in IMG/M
3300025897Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)EnvironmentalOpen in IMG/M
3300026403Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 2R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028290Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 25R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028330Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 76R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028334Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 68R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300032153Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E4_V_0.2 metaT (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1006337513300000101MarineNEISGLKLAIVLRLKRNYHCRSTDVGEDYDLRVIFSKSIGGYIVKTSSSEIVETN*
JGI20159J14440_1000727993300001353Pelagic MarineMYSGNQSSLGGNEISGLKLATELRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTSSSEIAETN*
GOS2229_101026123300001963MarineMYSRDQSSLGGNEISGLKLATDLRLKRNYHCRSTDVGEDYDLRVIISKNIGGYIVKTSSSEIVETH*
Ga0005265J37294_10003113300002646MarineGNEISGLKLAIVLRLKRNYHCRSTDVGEDYDLRVIFSKSIGGYIVKTSSSEIVETN*
Ga0005230J37285_10303713300002682MarineGNEISGLKLATDLRLNRTYHCRITDVGEDYDLRIIINKSIGVYIVKTSSSEIVETN*
Ga0005232J37287_10449313300002686MarineLKLAIVLRLKRNYHCRSTDVGEDYDLRVIFSKSIGGYIVKTSSSEIVETN*
Ga0005227J37284_100167013300002688MarineGGNEISGLKLATDLRLNRTYHCRITDVGEDYDLRIIINKSIGVYIVKTSSSEIVETN*
Ga0005226J37279_100015713300002692MarineEISGLKLATDLRLKRNYHCRSTDVGEDYDLRVIISKSIGGYIVKTSSSEIVETN*
Ga0005253J43195_100252513300002884MarineGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRIIINKSIGVYIVKTSSSEIVETN*
Ga0005267J43198_100163513300002885MarineGGNEISGLKLAIVLRLKRNYHCRSTDVGEDYDLRVIFSKSIGGYIVKTSSSEIVETN*
Ga0006245J48900_10079113300003294SeawaterGGNKISGLKLATDLRLKRTYHCRITDVGEDYDLRIIISKSIGVYIVKTTSSEIVEAN*
Ga0006244J48909_100078413300003299SeawaterLGGNKISGLKLATDLRLKRTYHCRITDVGEDYDLRIIISKSIGVYIVKTTSSEIVEAN*
Ga0005239J48904_100001313300003301MarineGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRIIISKSIGGYIVKTSSSEIVETN*
Ga0008452J51689_10255613300003549SeawaterGGNKISGLKLATDLRLKRTYHCRITDVGQDYDLRIIISKSIGVYIVKTTS*
Ga0008454J51686_10134413300003553SeawaterGNKISGLKLATDLRLKRTYHCRITDVGEDYDLRIIISKSIGVYIVKTTSSEIVEAN*
Ga0008455J51687_100184013300003566SeawaterGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRIIISKSIGVYIVKTXSSEIVEAN*
Ga0008459J53047_101523913300003683SeawaterGNDISGLNLATGLRLKRNYHCRITDVGEGYDLRVIINKSIGGYIVKTSS*
Ga0055584_10057913433300004097Pelagic MarineMYSRSQSSLGGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTSSSEIAETN*
Ga0066622_117096723300004636MarineGNEISGLKLATDLRLKRNYHCRSTDVGEDYDLRVIFSKSIGGYIVKTSSSEIVETN*
Ga0075487_150502313300006356AqueousGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTSSSEIAETN*
Ga0075494_142083923300006382AqueousLRLKRNYHCRSTDVGEDYDLRVIISKNIGGYIVKTSSSEIVETH*
Ga0075516_102595413300006384AqueousEISGLKLATDLRLNRTYHCRITDVGEDYDLRIIINKSIGVYIVKTRSSEIVETH*
Ga0075517_157684113300006393AqueousEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTSSSEIVETN*
Ga0075495_109114413300006399AqueousSGLKLAIVLRLKRNYHCRSTDVGEDYDLRVIISKNIGGYIVKTSSSEIVETH*
Ga0075503_101022223300006400AqueousGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRIIISKSIGGYIVKTSSSEIAETN*
Ga0075511_109188023300006402AqueousGNEISGLKLAIVLRLKRNYHCRSTDVGEDYDLRVIISKSIGGYIVKTSSSEIVETN*
Ga0075515_1096805713300006404AqueousEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTSSSEIAETN*
Ga0075510_1003111113300006405AqueousGGNEISGLKLAIVLRLKRNYHCRSTDVGEDYDLRVIISKSIGGYIVKTSSSEIVETN*
Ga0075484_148092123300006602AqueousDISGLNLATGLRLKRNYHCRITDVGEGYDLRVIINKSIGGYIVKTSS*
Ga0005505_101428913300006706Deep OceanGGNEISGLKLATDLRLKRIYHCRVTDVGEDYVLRIIILKSIGGLIVKTNFSEIAETN*
Ga0102773_102821513300007615MarineEISGLKLATDLRLKRIYHCRVTDVGEDYVLRIIILKSIGGLIVKANFSEIAETN*
Ga0103935_1144823300008598Coastal WaterSSLGGNEISGLKLATDLRLKRIYHCRITDVGEDYDLRIIISKSIGVYIVKTTSSEIVEAN
Ga0103933_1440423300008601Coastal WaterTSLGGNKISGLKLATDLRLKRTYHCRITDVGEDYDLRIIISKSIGVYIVKTTSSEIVEAN
Ga0103947_1095113300008690Coastal WaterPSLGGNKISGLKLATDLRLKRTYHCRITDVGEDYDLRIIISKSIGVYTVKTIS*
Ga0103943_1272923300008693Coastal WaterSLGGNKISGLKLATDLRLKRTYHCRITDVGEDYDLRIIISKSIGVYIVKTTSSEIVEAN*
Ga0103696_103282413300008791Ocean WaterAFLKLATDLRLNRTYHCRITDVGEDYDLRIIINKSIGVYIVKTSSSEIVETN*
Ga0103696_103427913300008791Ocean WaterQFLKLAIVLRLKRNYHCRSTDVGEDYDLRVIISKSIGGYIVKTSSSEIVETN*
Ga0103484_101221623300008919Bay WaterLATELRLKRNYHCRITDVGEDYDLRVIISKSIGGYFVKTSSSEIAETN*
Ga0103487_101305533300008922Bay WaterELRLKRNYHCRITDVGEDYDLRVIISKSIGGYFVKTSSSEIAETN*
Ga0104273_10140213300008955Ocean WaterLGGNEISGLKLAIVLRLKRNYHCRSTDVGEDYDLRVIFSKSIGGYIVKTSSSELVETN*
Ga0104259_103093013300008958Ocean WaterSGLKLATDLRLKRVYHCRITDVGEDYDLRIIINKSIGVYIVKTSSSEIVETN*
Ga0104258_108059223300008993Ocean WaterSLGGNEISGLKLATDLRLNRTYHCRITDVGEDYDLRIIINKSIGVYIVKTSSSEIVETN*
Ga0104258_109423413300008993Ocean WaterFLKLAIVLRLKRNYHCRSTDVGEDYDLRVIISKSIGGYIVKTSSSEIVETN*
Ga0115566_1009452323300009071Pelagic MarineMYSGNQSSLGGNEISGLKLATELRLKRNYHCRITDVGEDYDLRVIISKSIGGYFVKTSSSEIAETN*
Ga0115549_101594043300009074Pelagic MarineLYVQNPMYSRSQSSLGGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTSSSEIAETN*
Ga0115552_107276443300009077Pelagic MarineMYSGNQSSLGGNEISGLKLATELRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTSSSEIA
Ga0115552_112011533300009077Pelagic MarineMYSRSQSSLGGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTSSSEIA
Ga0115545_104013933300009433Pelagic MarineMYSRNQSSLGGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTSSSEIAETN*
Ga0115545_118269013300009433Pelagic MarineCRITDVGEDYDLRVIISKSIGGYFVKTSSSEIAETN*
Ga0115557_115190023300009443Pelagic MarineMYSRSQSSLGGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTSS
Ga0115560_103015043300009447Pelagic MarineLYVQNPMYSRSQSSLGGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYFVKTSSSEIAETN*
Ga0115099_1059353913300009543MarineGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTGSSEIAETN*
Ga0115101_100776013300009592MarineGNEISGLKLATDLRLKPNYHCRITDVGEDYDLRVIINKSIGDYIVKTSSSEIVETN*
Ga0115103_124285313300009599MarineNDISGLNLATGLRLKRNYRCRITDVGEGYDLRVIINKSIGGYIVKTSS*
Ga0129329_100914723300012470AqueousLKLAIVLRLKRNYHCRSTDVGEDYDLRVIISKNIGGYIVKTSSSEIVETH*
Ga0129350_114268913300012523AqueousLGGNDISGLNLATGLRLKRNYHCRITDVGEGYDLRVIINKSIGGYIVKTSS*
Ga0129352_1067029723300012528AqueousGGNEVSGLKLAIVLRLKRNYHCRSTDVGEDYDLRVIFSKSIGGYIVKTSSSEIVETN*
Ga0182088_124963613300016703Salt MarshGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTSSSEIAETN
Ga0182045_102547813300016726Salt MarshDISGLNLATGLRLKRNYHCRITDVGEGYDLRVIINKSIGGYIVKTSS
Ga0182094_113142123300016731Salt MarshATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYFVKTSSSEIAETN
Ga0182091_114917423300016766Salt MarshEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYFVKTSSSEIAETN
Ga0182095_191168613300016791Salt MarshMYSRNQSSLGGKEISGLKLATDLRLKRNYHCRITDVXEDYDLRVIISKNMGGYIVKQDLR
Ga0188867_100830623300018642Freshwater LakeSSLGGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTGSSEIAETN
Ga0188868_100257123300019077Freshwater LakeSSLGGNEISGLKLAIVLRLKRNYHCRSTDVGEDYDLRVIFSKSIGGYIVKTSSSEIVETN
Ga0182087_115930923300019196Salt MarshGNEISGLKLATELRLKRNYHCRITDVGEDYDLRVIISKSIGGYFVKTSSSEIAETN
Ga0180036_108199923300019200EstuarineGNEISGLKLAIVLRLKRNYHCRSTDVGEDYDLRVIFSKSIGGYIVKTSSSEIVETN
Ga0182086_107457913300020013Salt MarshEISGLKLATELRLKRNYHCRITDVGEDYDLRVIISKSIGGYFVKTSSSEIAETN
Ga0206128_101900143300020166SeawaterLYVQNPMYSRSQSSLGGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTSSSEIAETN
Ga0206128_105855313300020166SeawaterMYSGNQSSLGGNEISGLKLATELRLKRNYHCRITDVGEDYDLRVIISKSIGGYFVKTSSSEIAETN
Ga0206127_106391923300020169SeawaterMYSRSQSSLGGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTSSSEIAETN
Ga0206687_110436023300021169SeawaterLGGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTSSSEIAETN
Ga0206694_101626413300021291SeawaterGNEISGLKLATDLRLKPNYHCRITDVGEDYDLRVIINKSIGDYIVKTSSSEIVETN
Ga0210302_104044813300021299EstuarineGNDISGLNLATGLRLKRNYHCRITDVGEGYDLRVIINKSIGGYIVKTSS
Ga0210296_100878413300021305EstuarineGNEISGLKLATDLRLKPNYHCRITDVGEDYDLRVIINKSIGDYIVKTSSSEIAETN
Ga0210295_118028323300021323EstuarineGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRIIISKSIGGYNVKTSSSEIAETN
Ga0206696_143379613300021334SeawaterGGNEISGLKLATDLRLKPNYHCRITDVGEDYDLRVIINKSIGDYIVKTSSSEIVETN
Ga0210307_115793513300021336EstuarineGNEISGLKLAIVLRLKRNYHCRSTDVGEDYDLRVIISKSIGGYIVKTSSSEIVETN
Ga0206688_1047251813300021345SeawaterLRLKPNYHCRITDVGEDYDLRVIINKSIGDYIVKTSSSEIAETN
Ga0206692_109242213300021350SeawaterEISGLKLATDLRLKPNYHCRITDVGEDYDLRVIINKSIGDYIVKTSSSEIAETN
Ga0206692_115050223300021350SeawaterGGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTGSSEIAETN
Ga0213869_1009453643300021375SeawaterSGLNLATGLRLKRNYHCRITDVGEGYDLRVIINKSIGGYIVKTSS
Ga0222718_1045318213300021958Estuarine WaterMYSRNQSSLGGKEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTSSSEIAETN
Ga0210293_11435613300022372EstuarineEISGLKLATDLRLKRNYHCRITDVGEDYDLRIIISKSIGGYIVKTGSSEIAETN
Ga0210293_12483023300022372EstuarineGGNEISGLKLAIVLRLKRNYHCRSTDVGEDYDLRVIFSKSIGGYIVKTSSSEIVETN
Ga0210311_104413613300022374EstuarineGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRIIISKSIGGYIVKTSSSEIAETN
Ga0210313_104343423300022375EstuarineGVTKFQFLKLAIVLRLKRNYHCRSTDVGEDYDLRVIISKSIGGYIVKTSSSEIVETN
Ga0232113_103504313300023679SeawaterGGNKISGLKLATDLRLKRTYHCRITDVGQDYDLRIIISKSIGVYTVKTIS
Ga0228686_105708923300023685SeawaterGNKISGLKLATDLRLKRTYHCRITDVGQDYDLRIIISKSIGVYTVKTIS
Ga0228685_106707213300023701SeawaterGGNEISGLKLATDLRLKPNYHCRITDVGEDYDLRVIINKSIGDYIVKTSSSEIAETN
Ga0209196_111504213300025654Pelagic MarineATELRLKRNYHCRITDVGEDYDLRVIISKSIGGYFVKTSSSEIAETN
Ga0209659_117891123300025658MarineSHSQSSLGGNEISGLKLAIVLRLKRNYHCRSTDVGEDYDLRVIFSKSIGGYIVKTSSSEIVETN
Ga0209652_102352413300025684MarineKLAIVLRLKRNYHCRSTDVGEDYDLRVIFSKSIGGYIVKTSSSEIVETN
Ga0209308_1023226013300025869Pelagic MarineMYSRNQSSLGGNEISGLKLATELRLKRNYHCRITDVGEDYDLRVIISKSIGGYFGKTSSSEIAETN
Ga0209632_1003908313300025886Pelagic MarineMYSGNQSSLGGNEISGLKLATELRLKRNYHCRITDVGEDYDLRVIISKSIGGYFGKTSSSEIAETN
Ga0209632_1008675343300025886Pelagic MarineKISGLKLATELRLKRNYHCRITDVGEDYDLRVIISKSIGGYFVKTSSSEIAETN
Ga0209335_1002706673300025894Pelagic MarineMYSGNQSSLGGNEISGLKLATELRLKRNYHCRITDVGEDYDLRVIISKSIGGYIVKTSSSEIAETN
Ga0209425_1011579033300025897Pelagic MarineMYSRSQSSLGGNEISGLKLATDLRLKRNYHCRITDVGEDYDLRVIISKSIGGYFVKTSSSEIAETN
Ga0247557_104013823300026403SeawaterGGNKISGLKLATDLRLKRTYHCRITDVGEDYDLRIIISKSIGVYIVKTTSSEIVEAN
Ga0247572_103522513300028290SeawaterGNKISGLKLATDLRLKRTYHCRITDVGEDYDLRIIISKSIGVYIVKTTSSEIVEAN
Ga0247601_105425123300028330SeawaterGNKISGLKLATDLRLKRTYHCRITDVGQDYDLRIIISKSIGVYIVKTTSSEIVEAN
Ga0247597_105994013300028334SeawaterDLRLKRTYHCRITDVGEDYDLRIIISKSIGVYIVKTTSSEIVEAN
Ga0073946_105777113300032153MarineGGNEISGLKLATDLRLKRIYHCRVTDVGEDYVLRIIILKSIGGLIVKTNFSEIAETN


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