Sample 3300003566

Overview

Basic Information
IMG/M Taxon OID	3300003566 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0099541 \| Gp0089012 \| Ga0008455
Sample Name	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_07_M0_10 (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	34703394
Sequencing Scaffolds	21
Novel Protein Genes	25
Associated Families	23

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1
All Organisms → cellular organisms → Eukaryota	1
Not Available	8
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Patiriisocius → Patiriisocius marinus	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	2
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Fragilariopsis → Fragilariopsis cylindrus → Fragilariopsis cylindrus CCMP1102	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Goniodomataceae → Pyrodinium → Pyrodinium bahamense	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacteriaceae incertae sedis → ant, tsetse, mealybug, aphid, etc. endosymbionts → ant endosymbionts → Candidatus Blochmannia → Candidatus Blochmannia chromaiodes	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. PCC 7107	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Archaeal Communities From Monterey Bay, Ca, That Are Ammonia-Oxidizing
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater → Marine Archaeal Communities From Monterey Bay, Ca, That Are Ammonia-Oxidizing

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → intertidal zone → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Monterey Bay, California, USA
Coordinates	Lat. (^o)	36.25	Long. (^o)	-122.2099	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000075	Metagenome / Metatranscriptome	2622	Y
F001488	Metagenome / Metatranscriptome	686	Y
F006424	Metagenome / Metatranscriptome	373	Y
F012639	Metagenome / Metatranscriptome	279	Y
F022183	Metagenome / Metatranscriptome	215	Y
F025849	Metagenome / Metatranscriptome	200	Y
F027186	Metagenome / Metatranscriptome	195	Y
F031523	Metagenome / Metatranscriptome	182	Y
F033300	Metatranscriptome	177	Y
F043967	Metagenome / Metatranscriptome	155	Y
F044273	Metagenome / Metatranscriptome	154	N
F051164	Metagenome / Metatranscriptome	144	N
F052640	Metagenome / Metatranscriptome	142	N
F059360	Metagenome / Metatranscriptome	134	Y
F060579	Metatranscriptome	132	N
F074943	Metatranscriptome	119	N
F078750	Metagenome / Metatranscriptome	116	N
F082717	Metagenome / Metatranscriptome	113	N
F085780	Metagenome / Metatranscriptome	111	Y
F093867	Metagenome / Metatranscriptome	106	N
F093941	Metagenome / Metatranscriptome	106	N
F101265	Metagenome / Metatranscriptome	102	N
F104783	Metagenome / Metatranscriptome	100	Y

Family

Category

Number of Sequences

3D Structure?

F000075

Metagenome / Metatranscriptome

2622

F001488

Metagenome / Metatranscriptome

686

F006424

Metagenome / Metatranscriptome

373

F012639

Metagenome / Metatranscriptome

279

F022183

Metagenome / Metatranscriptome

215

F025849

Metagenome / Metatranscriptome

200

F027186

Metagenome / Metatranscriptome

195

F031523

Metagenome / Metatranscriptome

182

F033300

Metatranscriptome

177

F043967

Metagenome / Metatranscriptome

155

F044273

Metagenome / Metatranscriptome

154

F051164

Metagenome / Metatranscriptome

144

F052640

Metagenome / Metatranscriptome

142

F059360

Metagenome / Metatranscriptome

134

F060579

Metatranscriptome

132

F074943

Metatranscriptome

119

F078750

Metagenome / Metatranscriptome

116

F082717

Metagenome / Metatranscriptome

113

F085780

Metagenome / Metatranscriptome

111

F093867

Metagenome / Metatranscriptome

106

F093941

Metagenome / Metatranscriptome

106

F101265

Metagenome / Metatranscriptome

102

F104783

Metagenome / Metatranscriptome

100

Scaffold	Taxonomy	Length	IMG/M Link
Ga0008455J51687_1000544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1034	Open in IMG/M
Ga0008455J51687_1000576	All Organisms → cellular organisms → Eukaryota	1242	Open in IMG/M
Ga0008455J51687_1001840	Not Available	537	Open in IMG/M
Ga0008455J51687_1002422	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Patiriisocius → Patiriisocius marinus	1096	Open in IMG/M
Ga0008455J51687_1004106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	2173	Open in IMG/M
Ga0008455J51687_1004668	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Fragilariopsis → Fragilariopsis cylindrus → Fragilariopsis cylindrus CCMP1102	676	Open in IMG/M
Ga0008455J51687_1004989	Not Available	735	Open in IMG/M
Ga0008455J51687_1006617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1374	Open in IMG/M
Ga0008455J51687_1011894	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	793	Open in IMG/M
Ga0008455J51687_1012630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1377	Open in IMG/M
Ga0008455J51687_1016173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	1622	Open in IMG/M
Ga0008455J51687_1017292	Not Available	504	Open in IMG/M
Ga0008455J51687_1019210	Not Available	540	Open in IMG/M
Ga0008455J51687_1020805	Not Available	649	Open in IMG/M
Ga0008455J51687_1021327	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Goniodomataceae → Pyrodinium → Pyrodinium bahamense	598	Open in IMG/M
Ga0008455J51687_1025583	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	568	Open in IMG/M
Ga0008455J51687_1028807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacteriaceae incertae sedis → ant, tsetse, mealybug, aphid, etc. endosymbionts → ant endosymbionts → Candidatus Blochmannia → Candidatus Blochmannia chromaiodes	541	Open in IMG/M
Ga0008455J51687_1030386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. PCC 7107	794	Open in IMG/M
Ga0008455J51687_1033024	Not Available	532	Open in IMG/M
Ga0008455J51687_1037251	Not Available	621	Open in IMG/M
Ga0008455J51687_1037420	Not Available	581	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0008455J51687_1000544

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes

1034

Open in IMG/M

Ga0008455J51687_1000576

All Organisms → cellular organisms → Eukaryota

1242

Open in IMG/M

Ga0008455J51687_1001840

Not Available

537

Open in IMG/M

Ga0008455J51687_1002422

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Patiriisocius → Patiriisocius marinus

1096

Open in IMG/M

Ga0008455J51687_1004106

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales

2173

Open in IMG/M

Ga0008455J51687_1004668

All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Fragilariopsis → Fragilariopsis cylindrus → Fragilariopsis cylindrus CCMP1102

676

Open in IMG/M

Ga0008455J51687_1004989

Not Available

735

Open in IMG/M

Ga0008455J51687_1006617

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae

1374

Open in IMG/M

Ga0008455J51687_1011894

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium

793

Open in IMG/M

Ga0008455J51687_1012630

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria

1377

Open in IMG/M

Ga0008455J51687_1016173

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales

1622

Open in IMG/M

Ga0008455J51687_1017292

Not Available

504

Open in IMG/M

Ga0008455J51687_1019210

Not Available

540

Open in IMG/M

Ga0008455J51687_1020805

Not Available

649

Open in IMG/M

Ga0008455J51687_1021327

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Goniodomataceae → Pyrodinium → Pyrodinium bahamense

598

Open in IMG/M

Ga0008455J51687_1025583

568

Open in IMG/M

Ga0008455J51687_1028807

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacteriaceae incertae sedis → ant, tsetse, mealybug, aphid, etc. endosymbionts → ant endosymbionts → Candidatus Blochmannia → Candidatus Blochmannia chromaiodes

541

Open in IMG/M

Ga0008455J51687_1030386

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. PCC 7107

794

Open in IMG/M

Ga0008455J51687_1033024

Not Available

532

Open in IMG/M

Ga0008455J51687_1037251

Not Available

621

Open in IMG/M

Ga0008455J51687_1037420

Not Available

581

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0008455J51687_1000544	Ga0008455J51687_10005442	F059360	MTLFKEVLVPANLVPAAAVIREGQALSVITGRTESVDCNISYMLKFKAQL*
Ga0008455J51687_1000576	Ga0008455J51687_10005761	F006424	LEIGITALGSGWVNTVFVRYDFPEFGTDLVSALSSLNMYDF
Ga0008455J51687_1001840	Ga0008455J51687_10018401	F101265	GNEISGLKLATDLRLKRNYHCRITDVGEDYDLRIIISKSIGVYIVKTXSSEIVEAN*
Ga0008455J51687_1002422	Ga0008455J51687_10024221	F078750	MKNLLLLLIFISLFSCSPEETTQANNTEQNYTTTLSSFVLNDYLATPAIDVPLGTLFYQNVPYGPDQRQVIDIFLPPSASGFSVTQQDVVDYRDMILNIHDGDFKSGDKSAAYYTDNEISAYLSNNIAFVSMNYRFLNTSEQNNKGVTTSFKDAENVFNFIRTHTNKLKINSNKIFIIGNGFAGSSITQYLLSQPFYGFKVKGISMNDPLSSLDFLDFNDTFSDFDFDLYSFVSEQDEQMIMELYGGIQFNQLESEDIIIKNRETASFTSAYDNFTGRVRISAIDYNVPYQTLENIKHLIRHQLHSIEIYNKATLQGLHVDAQILHLHMQNDQSELDFILDTFL*
Ga0008455J51687_1004106	Ga0008455J51687_10041063	F027186	MITNSDFNFKKNELVTLELPFSEHIEELRQRIFHIFWIILLLTCA
Ga0008455J51687_1004668	Ga0008455J51687_10046681	F044273	MVNQATLINESSAFLGNKKILAVGLFDVTVNYGKRVVAPAAVGLATGLATKAIQKKVIKNKNDKNTSDDKSYSMGNRMLTGAIGLAAAAGTQKILQVTDAKKNDLTPIMVVAVTREHVYLLGWKGTHKNGKITEKLQSYNRKKATMKFHTRDLTAHTIDIKEDGESAKIVCDLGPTHHNKKMNREVINELKKN*
Ga0008455J51687_1004989	Ga0008455J51687_10049892	F074943	MQMAEETVGMMNEAIASQGSDIDESQRQIKRLLEENLEIWKANLKE*
Ga0008455J51687_1005852	Ga0008455J51687_10058521	F000075	LFKMKFACLIAAVAATKYDNMNEDELLVNLSSTLSSALDSEARGDGDAAVAKTAAIKNIQKSLTARILKRLDDGQPLVEVARKMKAIEGMQPQINDMERRLGIMQSVEPVLENAIKTLQKVVDVRGMGKK*
Ga0008455J51687_1006617	Ga0008455J51687_10066173	F085780	MRSKLKSLKIVQVLPNGCVHFDHLVYLKTYTRYNFSKKSLFFSLLDKKKLFFENSNFFYKKY
Ga0008455J51687_1011894	Ga0008455J51687_10118941	F051164	KRAAMKNIFFILILFLSSHTVFGQWEKQFYVDENGVPTKDSYESLSARGSFSNAQTKNQEASYIFIKDEASITVKIFEYNTEVPSTSQASFQDVVLTKPDGNIAKIKRVFFTKKGALFFSKGKFCEKDQICLWHLLESWIVNKDKFADFNKQTQTPGDYTMLFDRAIGDEKSNYTVNFTLK*
Ga0008455J51687_1012630	Ga0008455J51687_10126303	F025849	MNLNLFRYLGQLVGDSATSFRSLHEHQCKCLEQSSTYNRQKETKNDVYLQNENSVGNWISLSLNKKSFGALEHIEMNEKLKLPYEGRQLFTRWTHSYPNSNEIKSKTFYIKYNNELSVVDKIMLNNFQNKYFYHIIDDIIYSLKSKNVEQDNLLTILYSPVLYLQNNFSIDFFDIWVDEIYIN
Ga0008455J51687_1015863	Ga0008455J51687_10158631	F000075	MNEDDLLVSLESTLSSAQASEARGDADAAVAKTAAIKNIQKALTARILKRLDDGQPLVEVARKMKAIEGMQPQINDMERRLGIMQSVEPVLENAIKTLQKVVDVRGMGKK*
Ga0008455J51687_1016173	Ga0008455J51687_10161731	F001488	EKLNMARLELTLNFPKNFEIKTFNVKSEKKLSPLAKLILQSVQFKHFYYVRDDIFYLLKSNPIERDFLLQALYSIVISLQNNLSINFFDMWIYEIYINKVSINNKFMNQKFQNLESGEYITIKLAYGNNVSQEKK*
Ga0008455J51687_1017292	Ga0008455J51687_10172922	F052640	MSNPSIKTIDELEAQYYGYNRNFLRKADSPVTTSTAGVFNAIFGA
Ga0008455J51687_1019210	Ga0008455J51687_10192101	F060579	RTTTKMLGLLAAACSFNAPTSMVGQSAVSSVTRTEVSMSTKYTVAAGVAKKKNPTTGDSKNLWGYKVGARAPDTAKSSGTTKSEQTIFDKMFGKQDTISKDVKATKNDPRKTRRI*
Ga0008455J51687_1020805	Ga0008455J51687_10208051	F093867	KKLNVMKKLIVLAVIFQTITSCGENSLPITNQKNVRLDSFESMRYNIFEEVKEDSLEIAKVI*
Ga0008455J51687_1021327	Ga0008455J51687_10213271	F031523	QPFEVTLPMMLVNQMHLANGWMKGGKNVKQVTAEVVKFLATNYAKARDEVEADKDTMKAFFKSQKDMPGKTKADVLKDIWAELPKHTGKPVPPLDDEMLAELAEEPAIIEGEFKHSWGTADKLYKSEAIDAFGMKYLLGVFETKGEAEKAFADWNSEYEKARSDMKAEMQQWSKQEQARLDKDTTGQERIKKVLDEARR
Ga0008455J51687_1022514	Ga0008455J51687_10225141	F043967	TFFDGVLPPFSNIGNTERGEILDAPTLRGVGLKADFSTANPTSAYDTANFGKVEIFNKDVLKNPITGEGPEIAGKKTIAAAEKRADTPSYASQSLANFARWRRGEKTDDTRRFDLQKGDY
Ga0008455J51687_1024995	Ga0008455J51687_10249951	F000075	ILAATVAANKYDHMNEDELLAQLASTLSSAQMSEARGDGDAAVAKTAAIKNIQKSLTARILKRLDDGQPLVEVARKMKAIEGMQPQINDMERRLGIMQSVEPVLENAIKTLQKVVDVRGMGKK*
Ga0008455J51687_1025583	Ga0008455J51687_10255832	F012639	MSANNSGIVLTCSAAFAIAAPVATVISGTMQTSPTVTAVTELQVPLTENWIATDMYILAAAGAGTPTVINPVISLDKNRGRQLVQTVPLSAMLITNNTRPRFSPNPIGFEGGSIIRTFATSTVLNG
Ga0008455J51687_1028807	Ga0008455J51687_10288071	F082717	KLCLTNSYETPKIEKIILSASVSFKPQQVRGLAATSGNMASKVSDRSNTKIAGKKKITGKSRASGMLPNFGHGLEDCTVEVRKALILLSGQSLESKTFRVGRPHLGIRKGRLAAYQVTLRDQSMYLFLERLLLEVIPKVMKTDPATLITGAADRRLQRTSLKVANLQVGNCERVPLDTM
Ga0008455J51687_1030386	Ga0008455J51687_10303861	F093941	LTMKTYLKLFPLLFLFLAACNSSDDSYSGIAWDEEVDGELSGDLLSPSFVSLQVGDNRIIGSSTPAEGAMCTTFEGGPPVPIIPYFPNHESYVDVFSFNLSENERLVSITVESLDVSPFHNFEDFPCIGSFEEQNGAFVAINNSDKIDWNSDNVINFISLPVTYPLIGIGFAKSVNENILNSFRQDFPLPGYEGVNNENLDISNGTYTFWWKEGANNADYTLNFVVEKIN*
Ga0008455J51687_1033024	Ga0008455J51687_10330241	F022183	FTFQSKSWSIAGEKEFENHFTILNPALSVMQVSVHEENVYIAMKAVENGGVFVHNLNIQYNNAAGETDLDVIVDSAVAEAFPEAVAE*
Ga0008455J51687_1037251	Ga0008455J51687_10372511	F033300	SWVVKVDAPTVFLPDNLLAILATKQDYSTGVYYQNCEKVLEGYFGNLEVTSAEGFKRFLEQMDSSYTNGCWRQTTEECKKGWKYGTWGEDLFMQRTMDDAEVSKISDFSLTTSGTCPGDRPKDKKDDTKYVPPCKAGETKAAVHPFRDVSSWFKCLGTITGKQYS*
Ga0008455J51687_1037420	Ga0008455J51687_10374201	F104783	EKNQSIEIPSTIHAQSFIFRRAVVRMKPLTAGSTSTILKGGVIFSPSHFSGFEISSGTSIDSTTNKAITNNLGFNDILLGLDEYKPINNIYFDMEFQSEDINRGFTVSTRNFDREDAEIFGTGPGQISSIDIYFQFSSLYKYEGY*

Scaffold ID

Protein ID

Family

Sequence

Ga0008455J51687_1000544

Ga0008455J51687_10005442

F059360

MTLFKEVLVPANLVPAAAVIREGQALSVITGRTESVDCNISYMLKFKAQL*

Ga0008455J51687_1000576

Ga0008455J51687_10005761

F006424

LEIGITALGSGWVNTVFVRYDFPEFGTDLVSALSSLNMYDF

Ga0008455J51687_1001840

Ga0008455J51687_10018401

F101265

GNEISGLKLATDLRLKRNYHCRITDVGEDYDLRIIISKSIGVYIVKTXSSEIVEAN*

Ga0008455J51687_1002422

Ga0008455J51687_10024221

F078750

MKNLLLLLIFISLFSCSPEETTQANNTEQNYTTTLSSFVLNDYLATPAIDVPLGTLFYQNVPYGPDQRQVIDIFLPPSASGFSVTQQDVVDYRDMILNIHDGDFKSGDKSAAYYTDNEISAYLSNNIAFVSMNYRFLNTSEQNNKGVTTSFKDAENVFNFIRTHTNKLKINSNKIFIIGNGFAGSSITQYLLSQPFYGFKVKGISMNDPLSSLDFLDFNDTFSDFDFDLYSFVSEQDEQMIMELYGGIQFNQLESEDIIIKNRETASFTSAYDNFTGRVRISAIDYNVPYQTLENIKHLIRHQLHSIEIYNKATLQGLHVDAQILHLHMQNDQSELDFILDTFL*

Ga0008455J51687_1004106

Ga0008455J51687_10041063

F027186

MITNSDFNFKKNELVTLELPFSEHIEELRQRIFHIFWIILLLTCA

Ga0008455J51687_1004668

Ga0008455J51687_10046681

F044273

MVNQATLINESSAFLGNKKILAVGLFDVTVNYGKRVVAPAAVGLATGLATKAIQKKVIKNKNDKNTSDDKSYSMGNRMLTGAIGLAAAAGTQKILQVTDAKKNDLTPIMVVAVTREHVYLLGWKGTHKNGKITEKLQSYNRKKATMKFHTRDLTAHTIDIKEDGESAKIVCDLGPTHHNKKMNREVINELKKN*

Ga0008455J51687_1004989

Ga0008455J51687_10049892

F074943

MQMAEETVGMMNEAIASQGSDIDESQRQIKRLLEENLEIWKANLKE*

Ga0008455J51687_1005852

Ga0008455J51687_10058521

F000075

LFKMKFACLIAAVAATKYDNMNEDELLVNLSSTLSSALDSEARGDGDAAVAKTAAIKNIQKSLTARILKRLDDGQPLVEVARKMKAIEGMQPQINDMERRLGIMQSVEPVLENAIKTLQKVVDVRGMGKK*

Ga0008455J51687_1006617

Ga0008455J51687_10066173

F085780

MRSKLKSLKIVQVLPNGCVHFDHLVYLKTYTRYNFSKKSLFFSLLDKKKLFFENSNFFYKKY

Ga0008455J51687_1011894

Ga0008455J51687_10118941

F051164

KRAAMKNIFFILILFLSSHTVFGQWEKQFYVDENGVPTKDSYESLSARGSFSNAQTKNQEASYIFIKDEASITVKIFEYNTEVPSTSQASFQDVVLTKPDGNIAKIKRVFFTKKGALFFSKGKFCEKDQICLWHLLESWIVNKDKFADFNKQTQTPGDYTMLFDRAIGDEKSNYTVNFTLK*

Ga0008455J51687_1012630

Ga0008455J51687_10126303

F025849

MNLNLFRYLGQLVGDSATSFRSLHEHQCKCLEQSSTYNRQKETKNDVYLQNENSVGNWISLSLNKKSFGALEHIEMNEKLKLPYEGRQLFTRWTHSYPNSNEIKSKTFYIKYNNELSVVDKIMLNNFQNKYFYHIIDDIIYSLKSKNVEQDNLLTILYSPVLYLQNNFSIDFFDIWVDEIYIN

Ga0008455J51687_1015863

Ga0008455J51687_10158631

F000075

MNEDDLLVSLESTLSSAQASEARGDADAAVAKTAAIKNIQKALTARILKRLDDGQPLVEVARKMKAIEGMQPQINDMERRLGIMQSVEPVLENAIKTLQKVVDVRGMGKK*

Ga0008455J51687_1016173

Ga0008455J51687_10161731

F001488

EKLNMARLELTLNFPKNFEIKTFNVKSEKKLSPLAKLILQSVQFKHFYYVRDDIFYLLKSNPIERDFLLQALYSIVISLQNNLSINFFDMWIYEIYINKVSINNKFMNQKFQNLESGEYITIKLAYGNNVSQEKK*

Ga0008455J51687_1017292

Ga0008455J51687_10172922

F052640

MSNPSIKTIDELEAQYYGYNRNFLRKADSPVTTSTAGVFNAIFGA

Ga0008455J51687_1019210

Ga0008455J51687_10192101

F060579

RTTTKMLGLLAAACSFNAPTSMVGQSAVSSVTRTEVSMSTKYTVAAGVAKKKNPTTGDSKNLWGYKVGARAPDTAKSSGTTKSEQTIFDKMFGKQDTISKDVKATKNDPRKTRRI*

Ga0008455J51687_1020805

Ga0008455J51687_10208051

F093867

KKLNVMKKLIVLAVIFQTITSCGENSLPITNQKNVRLDSFESMRYNIFEEVKEDSLEIAKVI*

Ga0008455J51687_1021327

Ga0008455J51687_10213271

F031523

QPFEVTLPMMLVNQMHLANGWMKGGKNVKQVTAEVVKFLATNYAKARDEVEADKDTMKAFFKSQKDMPGKTKADVLKDIWAELPKHTGKPVPPLDDEMLAELAEEPAIIEGEFKHSWGTADKLYKSEAIDAFGMKYLLGVFETKGEAEKAFADWNSEYEKARSDMKAEMQQWSKQEQARLDKDTTGQERIKKVLDEARR

Ga0008455J51687_1022514

Ga0008455J51687_10225141

F043967

TFFDGVLPPFSNIGNTERGEILDAPTLRGVGLKADFSTANPTSAYDTANFGKVEIFNKDVLKNPITGEGPEIAGKKTIAAAEKRADTPSYASQSLANFARWRRGEKTDDTRRFDLQKGDY

Ga0008455J51687_1024995

Ga0008455J51687_10249951

F000075

ILAATVAANKYDHMNEDELLAQLASTLSSAQMSEARGDGDAAVAKTAAIKNIQKSLTARILKRLDDGQPLVEVARKMKAIEGMQPQINDMERRLGIMQSVEPVLENAIKTLQKVVDVRGMGKK*

Ga0008455J51687_1025583

Ga0008455J51687_10255832

F012639

MSANNSGIVLTCSAAFAIAAPVATVISGTMQTSPTVTAVTELQVPLTENWIATDMYILAAAGAGTPTVINPVISLDKNRGRQLVQTVPLSAMLITNNTRPRFSPNPIGFEGGSIIRTFATSTVLNG

Ga0008455J51687_1028807

Ga0008455J51687_10288071

F082717

KLCLTNSYETPKIEKIILSASVSFKPQQVRGLAATSGNMASKVSDRSNTKIAGKKKITGKSRASGMLPNFGHGLEDCTVEVRKALILLSGQSLESKTFRVGRPHLGIRKGRLAAYQVTLRDQSMYLFLERLLLEVIPKVMKTDPATLITGAADRRLQRTSLKVANLQVGNCERVPLDTM

Ga0008455J51687_1030386

Ga0008455J51687_10303861

F093941

LTMKTYLKLFPLLFLFLAACNSSDDSYSGIAWDEEVDGELSGDLLSPSFVSLQVGDNRIIGSSTPAEGAMCTTFEGGPPVPIIPYFPNHESYVDVFSFNLSENERLVSITVESLDVSPFHNFEDFPCIGSFEEQNGAFVAINNSDKIDWNSDNVINFISLPVTYPLIGIGFAKSVNENILNSFRQDFPLPGYEGVNNENLDISNGTYTFWWKEGANNADYTLNFVVEKIN*

Ga0008455J51687_1033024

Ga0008455J51687_10330241

F022183

FTFQSKSWSIAGEKEFENHFTILNPALSVMQVSVHEENVYIAMKAVENGGVFVHNLNIQYNNAAGETDLDVIVDSAVAEAFPEAVAE*

Ga0008455J51687_1037251

Ga0008455J51687_10372511

F033300

SWVVKVDAPTVFLPDNLLAILATKQDYSTGVYYQNCEKVLEGYFGNLEVTSAEGFKRFLEQMDSSYTNGCWRQTTEECKKGWKYGTWGEDLFMQRTMDDAEVSKISDFSLTTSGTCPGDRPKDKKDDTKYVPPCKAGETKAAVHPFRDVSSWFKCLGTITGKQYS*

Ga0008455J51687_1037420

Ga0008455J51687_10374201

F104783

EKNQSIEIPSTIHAQSFIFRRAVVRMKPLTAGSTSTILKGGVIFSPSHFSGFEISSGTSIDSTTNKAITNNLGFNDILLGLDEYKPINNIYFDMEFQSEDINRGFTVSTRNFDREDAEIFGTGPGQISSIDIYFQFSSLYKYEGY*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300003566: Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_07_M0_10 (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences