3300008919: Microbial communities of nutrient treated water from Blanes Bay, Barcelona, Spain - NA1

Overview

Basic Information

• IMG/M Taxon OID: 3300008919
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117944 | Gp0126073 | Ga0103484
• Sample Name: Microbial communities of nutrient treated water from Blanes Bay, Barcelona, Spain - NA1
• Sequencing Status: Permanent Draft
• Sequencing Center: Sodertorn University
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 51765255
• Sequencing Scaffolds: 21
• Novel Protein Genes: 24
• Associated Families: 22

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1
Not Available	10
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum	4
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium rassoulzadegani	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Microbial Communities Of Nutrient Treated Water From Blanes Bay, Barcelona, Spain
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Bay Water → Microbial Communities Of Nutrient Treated Water From Blanes Bay, Barcelona, Spain

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): marine biome → bay → sea water
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Barcelona, Spain
• Coordinates
  • Lat. (^o): 41.666
  • Long. (^o): 2.8
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000075	Metagenome / Metatranscriptome	2622	Y
F000088	Metagenome / Metatranscriptome	2436	Y
F000918	Metagenome / Metatranscriptome	834	Y
F002691	Metagenome / Metatranscriptome	536	Y
F002698	Metagenome / Metatranscriptome	536	Y
F005505	Metagenome / Metatranscriptome	398	Y
F015096	Metagenome / Metatranscriptome	257	Y
F016139	Metagenome / Metatranscriptome	249	Y
F019482	Metagenome / Metatranscriptome	229	Y
F021302	Metagenome / Metatranscriptome	219	Y
F026573	Metagenome / Metatranscriptome	197	Y
F037737	Metagenome / Metatranscriptome	167	N
F040128	Metagenome / Metatranscriptome	162	Y
F058909	Metagenome / Metatranscriptome	134	Y
F059656	Metagenome / Metatranscriptome	133	N
F060358	Metagenome / Metatranscriptome	133	N
F070259	Metagenome / Metatranscriptome	123	Y
F076148	Metagenome / Metatranscriptome	118	Y
F084728	Metagenome / Metatranscriptome	112	Y
F097453	Metagenome / Metatranscriptome	104	N
F101265	Metagenome / Metatranscriptome	102	N
F103255	Metagenome / Metatranscriptome	101	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0103484_1000136	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6638
Ga0103484_1001698	Not Available	1772
Ga0103484_1003352	Not Available	1162
Ga0103484_1004627	Not Available	962
Ga0103484_1005253	Not Available	890
Ga0103484_1005346	Not Available	881
Ga0103484_1005612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	857
Ga0103484_1005728	Not Available	847
Ga0103484_1007412	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum	734
Ga0103484_1008764	Not Available	665
Ga0103484_1008999	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium	655
Ga0103484_1009906	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum	619
Ga0103484_1010514	Not Available	598
Ga0103484_1010884	Not Available	586
Ga0103484_1011216	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	576
Ga0103484_1012146	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium rassoulzadegani	550
Ga0103484_1012172	All Organisms → cellular organisms → Bacteria	550
Ga0103484_1012216	Not Available	549
Ga0103484_1012298	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum	547
Ga0103484_1012477	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	542
Ga0103484_1014120	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum	506

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0103484_1000136	Ga0103484_10001363	F097453	MYDLILRDVEEVFGASPWSSLNIKTYPVNYQGSKGSSTEYVLINVLPSSSRNYAYGVKKETTGLVAVKIFVKAGDGQGRLMAIANSLDTVLDNKTLSNGTKLGTSYLTVEGLDPANKSLYSASYIIPFTHYGE*
Ga0103484_1001698	Ga0103484_10016984	F060358	EDLKTVITSVRLFIDNVLYDMKNVSKTTTKPVILAHIDAWKNELETIKQFTNT*
Ga0103484_1003352	Ga0103484_10033522	F070259	MKLESLVIVNQHVTVNDLSNFAHTAHHARKVVPAGHLLGALYAI*
Ga0103484_1004627	Ga0103484_10046272	F070259	MKLESLVIVNQHVTVNDLSNFAHTAHHARKVVPAGHLLRD*
Ga0103484_1005253	Ga0103484_10052531	F015096	MNTLTQWQSRRKELEDKYVELMLAKYPLLTDVTTDIQRKNGTRMFELNHKKYGPTRFATYKSGMVRKIIRTRFGELSCYQLNPQRINTRYYMTLSDNSELNVKSYEGKQRVGITNGLARLVYLEKYLIKNYDLDSVQDVIEVDGVLYKRI*
Ga0103484_1005346	Ga0103484_10053461	F059656	MSTKIKVVNFIAAILLTLSCSSNHCKSTVCPENFTCEDGQCVCDEYHTGNDCETEIQETFYGTFTGIMNVYNEDFMLINSFQKSIIVKDSTNHPAIMSVDNIVAYVDSRTISFKFSSLNEDLNTDIQTEIRGYGGLDNDELDFNYTETTQSVGPNLFPVIYKHYHFIGMR*
Ga0103484_1005612	Ga0103484_10056122	F002698	HALTGFINRVKLIDSFVYMKIKDGQIHSAVYLPQRDAVKSHSVACDKIFQVSNWPDTDAEMKVAFFEGNKVIEAIKHFESDAIKGELEFIEQEGELIASSLRMFNDELEITLACSEPSLGFKDLTPAQQAAIFAIDNTKFSFNIDTHTINKVKNLFGLDKEETFSVKANGKGVAVNGKSFNAVINPESNGEGAVTVYKKYLNLLDREEQKVHVTDSKIVFQSTESETLLTVSTCQTA*
Ga0103484_1005728	Ga0103484_10057281	F037737	MDQELKKYKMSYRNPTQYIDRQSGQIEQNLQKTLAGIGTGIVTSINKIHADNAAKTAAIRAEADKRVADAQNSIMQTQSKNPTADFGDLDLQLDLMNKLLMKDPAKRTAEEKTFINSMENIGDNMANMLKNTAMSQEAMMEQVNKIPGTMGAIDPKANPEQYAKLSVLANQTEGKTKARYKVNKNGQIVFSLDV
Ga0103484_1007412	Ga0103484_10074121	F000088	LLGYTEAATVAQKSSFAPPALGPYASDTDHLSAECYGGDEDDIMYDVFERYRVEERNPVGAGTGIWKLPKASGPQWAADIVRRFHVMDDDKVNSYVAANFDNFWKKYDNNGTGEIYESEGEVFMRALLGPNNRFRLAPGALSDMDSASLHVQNEFSATPDLLPYRHRYELALQNYPDGRTALQ*
Ga0103484_1008764	Ga0103484_10087642	F021302	MRTLIQKFKKNRRKAKHVKFLHLKIAELHGEIIAESFKGEFQLNKGITIIHSNVENKAKLLKK
Ga0103484_1008999	Ga0103484_10089991	F076148	TLTVAALLGLASYNEVNAITIFSNRGDKLYVEVSSSSDSSSSDDDAENIQLGDDEEVDHSNEFFLPGQHEMLGGGGYERVTPARFAADTDDIFMRSMIEQYALEQKNKDGTPSGKFWMDEAATRAAAREVLETNCGVKAAARDSWLNTYFGKAWNHFDVNRTGKVEVIKMPQLMRFLCSDQQMYLW*
Ga0103484_1009906	Ga0103484_10099062	F002691	MRVSGFNGADEDEIMDNVFSRFSQEGRTPSGHKTGQKLLMKDDARLAAGTILEAAHKLSPADVPKYLNSNFESAWNHFDQNHEGWIRYEETHTFQRFIQSKLNKFNGAPGSITDLASGASAYALSYPAGSEQTPIRQV*
Ga0103484_1010514	Ga0103484_10105141	F103255	MKSTADILQELSMYANLNHEDDWYLKDKINELKTRI
Ga0103484_1010514	Ga0103484_10105143	F058909	MKLTNTEENVLLVALDHMEEHIMELMEERELRGDMWKERLDACKTIRTKIKK*
Ga0103484_1010884	Ga0103484_10108841	F026573	KGKPFVSEFIASTQGLLEIPLWYHYRVVSRYWLSLMGCFLFSVYMDNFVPSCAITGVFLINTRIGPDVMAMIQGLLAVVVGIVVNALMYSFSCRFGNTSVLQVVAVIYWLCTLTVGKGSSSLAGMGLLMAALSPFALYKFCTPDTPAAQAGMAIGLWGGIRALLIAVVITVIMEFLHVPGLFTKLSRDALQAGFE
Ga0103484_1011216	Ga0103484_10112161	F005505	VKYFFFER*NISELDEVRFYGVAPH*YFRPLMGILVISPTHYEGLM*MGLFFILLAFLPIFYNFYNVYHKYVATIPMQNSLLQTSFFIFFMMSLYCTASMLPCGRYYYEPEGGYVGNP*VKFSYQFVYLYLG*FVHHLDLFDHYIFQFSQTFIRKCSSYSLRTLVLRKAASKKTSSRKAFAK**
Ga0103484_1012146	Ga0103484_10121461	F040128	LLGMTQAVSIKQLETPAPCEEPLEVSQEELEIQLDYFSRRLDMKYYENAMKIYGELLKQGKNPTLQIHTFELYDKAFSFPRVRRYDQVNQILNDIQHYQDNLNQNFTNALHVRNFLATAKKAQKELNTKYHDGEFSDPASFDPLEDHPVTWSNVKL*
Ga0103484_1012172	Ga0103484_10121721	F000918	MYKSRTQCWNEVMQSFKENERRTAICQKMYGQDNLIGLTEKQKEAYWNAV*
Ga0103484_1012216	Ga0103484_10122162	F101265	LATELRLKRNYHCRITDVGEDYDLRVIISKSIGGYFVKTSSSEIAETN*
Ga0103484_1012298	Ga0103484_10122981	F016139	VCSFLTHTSDIDDLLEGLDGVLEDWLDGLHDTESSLHIVDLWLHTLDGLHLSGDLNEWLSVIESLEDSGGKGLLDVLDGSGLGNGGITVSSGLSGESHVELGLEGDKELVLVHVLVSLHGLEELSIVMVVVSGGDGGNEKAE
Ga0103484_1012477	Ga0103484_10124771	F084728	FKEIRAETITVAATNNRGDSKKAKLFITLSRSEDFFENMKKFNDIREENERAASKIQEDARDSKNN*
Ga0103484_1013444	Ga0103484_10134441	F000075	FKMKFVACAFVATAAANQYDFMGEDELLAQLSSTLISAQRSEAMGDGDAAVAKTAAIKNIQKSLTARILKRLDDGQPLVEVARKMKAIEGMQPQINDMERRLGIMQSVEPVLENAIKTLQKVVDVRGMGKK*
Ga0103484_1014120	Ga0103484_10141201	F019482	VCSFLTHTSDIDDLLEGLDGVLEDWLDGLHDTESSLHIVDLWLHTLDGLHLSGDLNEWLSVIESLEDSGGQGLLDVLDGSGLGNSGVSVTSGLGLESGGEGVGERDEEFVFGHVVVLGGSDGGGESKG
Ga0103484_1014291	Ga0103484_10142911	F000075	ALVLAAAVAANKYDHMNEDELLAQLASTLSSAQMSEARGDGDAAVAKTAAIKNIQKSLTARILKRLDDGQPLVEVARKMKAIEGMQPQINDMERRLGIMQSVEPVLENAIKTLQKVVDVRGMGKK*