| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300008922 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0117944 | Gp0126076 | Ga0103487 |
| Sample Name | Microbial communities of nutrient treated water from Blanes Bay, Barcelona, Spain - NB2 |
| Sequencing Status | Permanent Draft |
| Sequencing Center | Sodertorn University |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 59187279 |
| Sequencing Scaffolds | 18 |
| Novel Protein Genes | 22 |
| Associated Families | 20 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum | 1 |
| All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium | 1 |
| Not Available | 9 |
| All Organisms → cellular organisms → Bacteria | 2 |
| All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium | 1 |
| All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum | 3 |
| All Organisms → cellular organisms → Eukaryota → Sar | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Microbial Communities Of Nutrient Treated Water From Blanes Bay, Barcelona, Spain |
| Type | Environmental |
| Taxonomy | Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Bay Water → Microbial Communities Of Nutrient Treated Water From Blanes Bay, Barcelona, Spain |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | marine biome → bay → sea water |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Barcelona, Spain | |||||||
| Coordinates | Lat. (o) | 41.666 | Long. (o) | 2.8 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F000075 | Metagenome / Metatranscriptome | 2622 | Y |
| F000088 | Metagenome / Metatranscriptome | 2436 | Y |
| F000237 | Metagenome / Metatranscriptome | 1498 | Y |
| F000588 | Metatranscriptome | 1006 | Y |
| F000820 | Metagenome / Metatranscriptome | 878 | Y |
| F002691 | Metagenome / Metatranscriptome | 536 | Y |
| F009426 | Metagenome / Metatranscriptome | 318 | Y |
| F010466 | Metagenome / Metatranscriptome | 303 | N |
| F012347 | Metagenome / Metatranscriptome | 281 | N |
| F034583 | Metagenome / Metatranscriptome | 174 | N |
| F045106 | Metagenome / Metatranscriptome | 153 | N |
| F049451 | Metagenome / Metatranscriptome | 146 | N |
| F060807 | Metagenome / Metatranscriptome | 132 | N |
| F070840 | Metatranscriptome | 122 | Y |
| F073629 | Metatranscriptome | 120 | Y |
| F074917 | Metagenome / Metatranscriptome | 119 | N |
| F076148 | Metagenome / Metatranscriptome | 118 | Y |
| F090440 | Metagenome / Metatranscriptome | 108 | N |
| F099286 | Metagenome / Metatranscriptome | 103 | N |
| F101265 | Metagenome / Metatranscriptome | 102 | N |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| Ga0103487_1000448 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum | 4114 | Open in IMG/M |
| Ga0103487_1002073 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium | 1645 | Open in IMG/M |
| Ga0103487_1005681 | Not Available | 900 | Open in IMG/M |
| Ga0103487_1006335 | All Organisms → cellular organisms → Bacteria | 847 | Open in IMG/M |
| Ga0103487_1008572 | Not Available | 709 | Open in IMG/M |
| Ga0103487_1009102 | Not Available | 684 | Open in IMG/M |
| Ga0103487_1010028 | All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium | 647 | Open in IMG/M |
| Ga0103487_1010219 | Not Available | 640 | Open in IMG/M |
| Ga0103487_1010496 | All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum | 630 | Open in IMG/M |
| Ga0103487_1010526 | All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum | 629 | Open in IMG/M |
| Ga0103487_1011354 | All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum | 602 | Open in IMG/M |
| Ga0103487_1012322 | All Organisms → cellular organisms → Bacteria | 573 | Open in IMG/M |
| Ga0103487_1012774 | Not Available | 561 | Open in IMG/M |
| Ga0103487_1013055 | Not Available | 554 | Open in IMG/M |
| Ga0103487_1013295 | Not Available | 548 | Open in IMG/M |
| Ga0103487_1013684 | All Organisms → cellular organisms → Eukaryota → Sar | 539 | Open in IMG/M |
| Ga0103487_1014820 | Not Available | 515 | Open in IMG/M |
| Ga0103487_1015345 | Not Available | 505 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| Ga0103487_1000448 | Ga0103487_10004481 | F074917 | MRFAETKRQKPTSFLTTKAKNKLDTIRQNPINQQKKQCGDRCHYKHSQCSSAGFTPRRPGNPVDFLTDLSNKLCGRHFSHRYLPIQVLINQDTAISTLRFPWVFDQANGQHLMKSIPAIFTLKG |
| Ga0103487_1002073 | Ga0103487_10020737 | F045106 | NVLFIEEFIEILGGDNFFLCDSIHQEQLFTMQDKLAKLIADHANNGTSVARHLVPLLPNTFNVE* |
| Ga0103487_1002991 | Ga0103487_10029911 | F000237 | MVLHYFTP*YYLYLVQLHVMFCHES*DTDSGETTYEDKSGSYVS*FYDAFLKEIQDA*Y*VIFVFSYFFIHHFDGSTVNYFFFER*NISELDEIRFYGVAPH*YFRPLMGILTIAPTHYEGLMWFAL*LVLLASLPLLNTFYNPYNKYLSVIPTQNSVLQTIFFILFMMSLYCAANMLPCGRYYYEDEGGYVGNP*VKFSYQYGYLYLMWIVHHLDTLDHYIFQFNQTLKRKYIMKSAPERSVA* |
| Ga0103487_1005681 | Ga0103487_10056812 | F012347 | MNRIKHGNINKWTATKAGQVIEFASSKPRHVKFEITANSNIEIWVADNNKMSDAVLVGTSNGKTEIQYTAPATTYVQIKAEKSADVFVNIPDLDQAVENTDNPSFTSIEPRVNNSTEFDRMVQFMKHNETQRNAQLEAERAALRAEVAKIKAEAETVVEAPIEAETEDAGETPE* |
| Ga0103487_1006335 | Ga0103487_10063353 | F034583 | PPFVVCESSVSLLLFFWTLIFLFVYILVPLIKLRFVIVSEKNSSHELEKTCTPFYGNTFKFNDTIV* |
| Ga0103487_1008572 | Ga0103487_10085721 | F073629 | EEDSSFMQGVLRHGQMAAAEREDTKNTAKDARKDATAKLMETATNMMKNGVTPDVVQFIETTITEVNSEVLGAIVDEHHRDQGIINAILDDFDAAIAEMEACAESVRGQHVERELLSHAHQLCRSDEAIKCARSRKCEEELEELWERVKIEEEEMRRIHWAIHGEWCEGSAPGHPSLADPFQWQIGESWEGPETSQSTDPYPAIDLSADVIEFRRFSVEYFGLYIAQKPRVELAWE |
| Ga0103487_1009102 | Ga0103487_10091021 | F070840 | RKMLETLGSYRGENKRAGLGTLPDVPVGGHPGNDHFYKQVEMAVRLTVMLSLIGCMVWLPEQTKAVGMARFAPFAGLAGCLMCFFSTFSIGGVLNTASAGISGCFVACFNIWLLRGFFPDGVTPGMGFTSAASLTGWVDLAIFNLLVLGFNCRMGFRMTSMAVNVGFMMCFLNPADKTLFSKNFKINPNGAAVSTFIGVCVGSLCAVLSVVLPYPMGWASSNMKAAGK |
| Ga0103487_1009389 | Ga0103487_10093891 | F000237 | HES*DTDSGETTYEDKSGSYVSWFYDAFLKEIQDAWYWVIFVFTYFFMHHFDGGTVNYFFFER*NISELDEVRFYGVAPHWYFRPFMGVLTISPTHYEGLMWFAL*LILLAFLPVINTFYNPYNRYLSVIPMQNSLLQSIFFILFMASLYCAASMLPCGRYYYEPEGGYVGNP*VKFSYQYGYLYLM*IVHHLDALDHYIFQFGQTLKRKYFTRGSSRTDLN* |
| Ga0103487_1010028 | Ga0103487_10100281 | F076148 | TLAVAALLGLASYNEVNAITIFSNRGDKLYVEVSSSSDSSSSDDDAENIQLGDDEEVDHSNEFFLPGQHEMLGGGGYERVTPARFAADTDDIFMRSMIEQYALEQKNKDGTPSGKFWMDEAATRAAAREVLETNCGVKAAARDSWLNTYFGKAWNHFDVNRTGKVEVIKMPQLMRFLCSDQQMYLW* |
| Ga0103487_1010219 | Ga0103487_10102191 | F049451 | KNLSSMKTLLMKPLFTFLFILCFSASYGQQLQLKEKYNSRNHRTLSFKTDRVKGSIKGSNASLSLTLKNTSEEAMDLSNIQLALVDATGRGAKLCGNTKILKPGRKTTLHLEACNGNDGLFMLNKAYSSRQAFKEDAFFLRNKEWQLRIGQDVVTFYTDF* |
| Ga0103487_1010496 | Ga0103487_10104961 | F000088 | IIAVACLLGYTEAATVAQKSSFAPPALGPYASDTDHLSAECYGGDEDDIMYDVFERYRVEERNPVGAGTGIWKLPKASGPQWAADIVRRFHVMDDDKVNSYVAANFDNFWKKYDNNGTGEIYESEGEVFMRALLGPNNRFRLAPGALSDMDSASLHVQNEFSATPDLLPYRHRYELALQNYPDGRTALQ* |
| Ga0103487_1010526 | Ga0103487_10105261 | F002691 | MRVSGFNGADEDEIMDNIYSRYSEEGRTTSGHKTGQKLLMKDQARLAAGTVLEAAHKLSPADVPKYLEANFEASWNHFDQNHEGWIRYEETHTFQRYLNGKLNKFNAAPGSITDLTSGGVNYALSYPAGSEQTPIRQV* |
| Ga0103487_1011354 | Ga0103487_10113541 | F000820 | DNLSTLFDSNVTRGALKNLVTDKPSPITTKLAQKTDGDILSALFDANVTRGALKNLVTDKPSPITQKLAQKNDGDILSALFDANVTRGALKNLITDKPSPITTKLAQVIRSDADILSALFDANVTRGALKNLVTDKPSPITTKLAQKSDGDILSALFDANVTRGALKNLVTDKPSPITQKLAQKTDSDILSALFDANVTR |
| Ga0103487_1012322 | Ga0103487_10123221 | F099286 | VFCLFFFNCNKNNSCEFLDDHNQLLKPVVLKKFEDDVLKVFKNAGLEVTINAFLINEELDSVSKNYYTANLISNYSNQSMSQYSSAFLEIYCDSIARIRSKPVSRFEFEELYNQSVD* |
| Ga0103487_1012774 | Ga0103487_10127741 | F010466 | VVFLLVQLNVFAQSAELEVGYDLAQEMLQWEELNPTHKAESDRYLKSMNYAFGYNGPDVEEVYHLLSDVDGAIPTKIEDSYDGRRKTWRATSVFVSLALHSEGEKRMFYLDMANHIARTDSDQTYAAVLLLEYVESIGSSGVDKRRSKILAYVQAYEEEIGIEFAERIYAFLGEN* |
| Ga0103487_1013055 | Ga0103487_10130553 | F101265 | ELRLKRNYHCRITDVGEDYDLRVIISKSIGGYFVKTSSSEIAETN* |
| Ga0103487_1013295 | Ga0103487_10132952 | F060807 | QYRGVLGQVQETLAKQEQEQYRANASVGDPFFKPGVERIKPEQKTDSASYGNKSIFSPRQNSYGDYIFGNQEERQRSMPVRGNVEGPLAMKDQNGDGKITQGDVIKARVEGYKK* |
| Ga0103487_1013309 | Ga0103487_10133091 | F000075 | LVAAVSATQYDSMTEDELLVNLESTLNSAQRSEARGDGDAAVAKTAAIKNIQKALTARILKRLDDGQPLVEVARKMKAIEGMQPQINDMERRLGIMQSVEPVLENAIKTLQKVVDVRGMGKK* |
| Ga0103487_1013684 | Ga0103487_10136841 | F000588 | EYFIMKVIALVLMLVCTPAVVAEESNPLGKVFELMSALEAKITKEGEAEAKAFNDYVEWCDDASANLHNEIKTGGEKKEELDATISKCKADIESSSVKIEDLSGSIAADEKELKEATAVRNKEVATFKASEAELVDAIDTLDRAVGILQKEMSKSPASLAQVNTASLDSVLNGLSVVIN |
| Ga0103487_1014820 | Ga0103487_10148201 | F090440 | EISGLKLATDLRLKRVYHCRITDVGEDDDLRIIIRKSIGG* |
| Ga0103487_1015286 | Ga0103487_10152861 | F000075 | LALIAAVAATKYDHMTEDELLVSLSNTLSSALESEARGDGDAAVAKTAAIKNIQKSLTARILKRLDDGQPLVEVARKMKAIEGMQPQINDMERRLGIMQSVEPVLENAIKTLQKVVDVRGMGKK* |
| Ga0103487_1015345 | Ga0103487_10153451 | F009426 | AKVNKDVKLSLNMILGEISYTIIFFMTTSPCVISAGAARETLFEGKADYCMIVCE* |
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