Metagenome / Metatranscriptome Family F099485

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099485
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	52 residues
Representative Sequence	MKQQIIRNWQHSPSKTQVARTPVKAVSKSLQQSQTFTHEDLMGLSWMLSEEGD
Number of Associated Samples	88
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	42.16 %
% of genes near scaffold ends (potentially truncated)	45.63 %
% of genes from short scaffolds (< 2000 bps)	66.99 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (99.029 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine (18.447 % of family members)
Environment Ontology (ENVO)	Unclassified (56.311 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (54.369 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.05% β-sheet: 0.00% Coil/Unstructured: 83.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00072	Response_reg	13.59
PF02518	HATPase_c	10.68
PF01037	AsnC_trans_reg	2.91
PF01956	EMC3_TMCO1	0.97
PF04254	DUF432	0.97
PF13462	Thioredoxin_4	0.97
PF04126	Cyclophil_like	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1422	Archaeal YidC/Oxa1-related membrane protein, DUF106 family	Cell wall/membrane/envelope biogenesis [M]	0.97
COG2430	Uncharacterized conserved protein, DUF432 domain	Function unknown [S]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	62.14 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	62.14 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	56.31 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	37.86 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	37.86 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Nitrosopumilus maritimus	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	13.59 %
Candidatus Nitrosopumilus sediminis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	3.88 %
Candidatus Nitrosopumilus koreensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis	3.88 %
Unclassified	root	N/A	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000148\|SI47jul10_100mDRAFT_c1008024	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	2234	Open in IMG/M
3300000153\|SI39nov09_135mDRAFT_c1056231	All Organisms → cellular organisms → Archaea	549	Open in IMG/M
3300000158\|SI54feb11_100mDRAFT_c1022459	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	1059	Open in IMG/M
3300000226\|SI34jun09_135mDRAFT_1011276	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	3057	Open in IMG/M
3300002231\|KVRMV2_100673871	All Organisms → cellular organisms → Archaea	638	Open in IMG/M
3300002231\|KVRMV2_101247990	All Organisms → cellular organisms → Archaea	1413	Open in IMG/M
3300002242\|KVWGV2_10350651	All Organisms → cellular organisms → Archaea	1660	Open in IMG/M
3300002670\|Ga0005255J37291_103239	All Organisms → cellular organisms → Archaea	728	Open in IMG/M
3300002676\|Ga0005257J37299_101001	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	900	Open in IMG/M
3300002685\|Ga0005237J37283_1002621	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	790	Open in IMG/M
3300002685\|Ga0005237J37283_1003324	All Organisms → cellular organisms → Archaea	759	Open in IMG/M
3300002686\|Ga0005232J37287_102114	All Organisms → cellular organisms → Archaea	783	Open in IMG/M
3300002687\|Ga0005276J37295_1004707	All Organisms → cellular organisms → Archaea	809	Open in IMG/M
3300002688\|Ga0005227J37284_1009897	All Organisms → cellular organisms → Archaea	722	Open in IMG/M
3300002696\|Ga0005228J37280_1003697	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	902	Open in IMG/M
3300002881\|Ga0005248J43193_1005526	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	757	Open in IMG/M
3300002885\|Ga0005267J43198_1001893	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	821	Open in IMG/M
3300002919\|JGI26061J44794_1005189	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	4185	Open in IMG/M
3300003478\|JGI26238J51125_1003612	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	4956	Open in IMG/M
3300003478\|JGI26238J51125_1021667	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1536	Open in IMG/M
3300003492\|JGI26245J51145_1003609	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	4973	Open in IMG/M
3300003492\|JGI26245J51145_1064733	All Organisms → cellular organisms → Archaea	540	Open in IMG/M
3300003494\|JGI26240J51127_1012074	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1962	Open in IMG/M
3300003495\|JGI26244J51143_1006450	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	3060	Open in IMG/M
3300003496\|JGI26241J51128_1006612	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	3773	Open in IMG/M
3300003500\|JGI26242J51144_1026447	All Organisms → cellular organisms → Archaea	1044	Open in IMG/M
3300003582\|JGI26252J51714_1044241	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	937	Open in IMG/M
3300003596\|JGI26255J51710_1014473	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	1855	Open in IMG/M
3300003602\|JGI26262J51727_1003427	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	5979	Open in IMG/M
3300003610\|Ga0005269J51882_101767	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	890	Open in IMG/M
3300003885\|Ga0063294_10089023	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	2017	Open in IMG/M
3300003886\|Ga0063293_10267026	All Organisms → cellular organisms → Archaea	1235	Open in IMG/M
3300003886\|Ga0063293_10267276	All Organisms → cellular organisms → Archaea	1234	Open in IMG/M
3300004007\|Ga0055476_10335546	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	537	Open in IMG/M
3300004209\|Ga0066649_10110403	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1498	Open in IMG/M
3300004210\|Ga0066639_10030887	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis	3992	Open in IMG/M
3300004273\|Ga0066608_1007163	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	4000	Open in IMG/M
3300004276\|Ga0066610_10282871	All Organisms → cellular organisms → Archaea	526	Open in IMG/M
3300004636\|Ga0066622_1174957	All Organisms → cellular organisms → Archaea	731	Open in IMG/M
3300005953\|Ga0066383_10163404	All Organisms → cellular organisms → Archaea	662	Open in IMG/M
3300006234\|Ga0082394_151328	All Organisms → cellular organisms → Archaea	869	Open in IMG/M
3300006468\|Ga0082251_10014232	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2722	Open in IMG/M
3300006711\|Ga0031673_1007544	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	839	Open in IMG/M
3300006900\|Ga0066376_10322657	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	897	Open in IMG/M
3300007619\|Ga0102947_1081907	All Organisms → cellular organisms → Archaea	1067	Open in IMG/M
3300007775\|Ga0102953_1068946	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1596	Open in IMG/M
3300007986\|Ga0100380_10277052	All Organisms → cellular organisms → Archaea	834	Open in IMG/M
3300009102\|Ga0114948_10069689	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2246	Open in IMG/M
3300009139\|Ga0114949_10019368	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis	4822	Open in IMG/M
3300009408\|Ga0117756_1124982	All Organisms → cellular organisms → Archaea	527	Open in IMG/M
3300009515\|Ga0129286_10002911	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	3471	Open in IMG/M
3300009702\|Ga0114931_10020942	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	7288	Open in IMG/M
3300009702\|Ga0114931_10509954	All Organisms → cellular organisms → Archaea	765	Open in IMG/M
3300010392\|Ga0118731_110562587	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	817	Open in IMG/M
3300010392\|Ga0118731_110593683	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1665	Open in IMG/M
3300010430\|Ga0118733_100530233	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis	2340	Open in IMG/M
3300010967\|Ga0139247_1009293	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	2859	Open in IMG/M
3300011013\|Ga0114934_10007381	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	6507	Open in IMG/M
3300011112\|Ga0114947_10960705	All Organisms → cellular organisms → Archaea	632	Open in IMG/M
3300011321\|Ga0138361_1155775	All Organisms → cellular organisms → Archaea	851	Open in IMG/M
3300020231\|Ga0212168_1261821	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	2809	Open in IMG/M
3300020234\|Ga0212227_1223099	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	4180	Open in IMG/M
3300021342\|Ga0206691_1037226	All Organisms → cellular organisms → Archaea	841	Open in IMG/M
3300021359\|Ga0206689_10340296	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	783	Open in IMG/M
3300022209\|Ga0224497_10000127	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	60312	Open in IMG/M
3300022226\|Ga0224512_10032176	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	3317	Open in IMG/M
3300022595\|Ga0215184_1006199	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	863	Open in IMG/M
3300022595\|Ga0215184_1242336	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	580	Open in IMG/M
(restricted) 3300022888\|Ga0233428_1008531	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	6331	Open in IMG/M
(restricted) 3300022888\|Ga0233428_1021928	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	3087	Open in IMG/M
(restricted) 3300022888\|Ga0233428_1083239	All Organisms → cellular organisms → Archaea	1208	Open in IMG/M
(restricted) 3300022888\|Ga0233428_1116541	All Organisms → cellular organisms → Archaea	956	Open in IMG/M
3300023481\|Ga0257022_1008442	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2050	Open in IMG/M
3300023500\|Ga0257021_1052437	All Organisms → cellular organisms → Archaea	956	Open in IMG/M
(restricted) 3300024258\|Ga0233440_1048909	All Organisms → cellular organisms → Archaea	1555	Open in IMG/M
(restricted) 3300024260\|Ga0233441_1207311	All Organisms → cellular organisms → Archaea	584	Open in IMG/M
(restricted) 3300024327\|Ga0233434_1024413	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis	3235	Open in IMG/M
3300024344\|Ga0209992_10001524	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	23970	Open in IMG/M
3300024344\|Ga0209992_10008617	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis	6644	Open in IMG/M
3300025243\|Ga0208335_1000733	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	10803	Open in IMG/M
3300025614\|Ga0209665_1007473	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	4416	Open in IMG/M
3300025622\|Ga0209264_1105944	All Organisms → cellular organisms → Archaea	705	Open in IMG/M
3300025643\|Ga0209151_1145541	All Organisms → cellular organisms → Archaea	608	Open in IMG/M
3300025659\|Ga0209249_1116600	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	773	Open in IMG/M
3300025660\|Ga0209045_1012325	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	3548	Open in IMG/M
3300025770\|Ga0209362_1222038	All Organisms → cellular organisms → Archaea	624	Open in IMG/M
3300025813\|Ga0210064_1021848	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	1758	Open in IMG/M
3300026127\|Ga0209956_1065662	All Organisms → cellular organisms → Archaea	704	Open in IMG/M
3300028174\|Ga0257123_1108204	All Organisms → cellular organisms → Archaea	625	Open in IMG/M
3300028175\|Ga0257117_1030264	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1618	Open in IMG/M
3300028175\|Ga0257117_1096045	All Organisms → cellular organisms → Archaea	704	Open in IMG/M
3300028598\|Ga0265306_10310167	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	850	Open in IMG/M
3300028599\|Ga0265309_10622873	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	727	Open in IMG/M
3300028600\|Ga0265303_11120824	All Organisms → cellular organisms → Archaea	653	Open in IMG/M
3300028600\|Ga0265303_11150571	All Organisms → cellular organisms → Archaea	645	Open in IMG/M
3300028706\|Ga0257115_1008535	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	4478	Open in IMG/M
3300030696\|Ga0187728_1019084	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	799	Open in IMG/M
3300030704\|Ga0187727_1003677	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	823	Open in IMG/M
3300032274\|Ga0316203_1175355	All Organisms → cellular organisms → Archaea	593	Open in IMG/M
3300032277\|Ga0316202_10370498	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	669	Open in IMG/M
3300032277\|Ga0316202_10529449	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	554	Open in IMG/M
3300033417\|Ga0214471_10648361	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	834	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.12%
Host-Associated	Host-Associated	3.88%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	92.23%
Terrestrial	Environmental → Terrestrial	3.88%
Human	Host-Associated → Human	1.94%
Invertebrates	Host-Associated → Invertebrates	1.94%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	88.35%
Soil	Environmental → Terrestrial → Soil	3.88%
Freshwater	Environmental → Aquatic → Freshwater	2.91%
Digestive System	Host-Associated → Human → Digestive System	1.94%
Cnidaria	Host-Associated → Invertebrates → Cnidaria	1.94%
Sediment	Environmental → Aquatic → Sediment	0.97%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	26.21%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	18.45%
Inlet	Environmental → Aquatic → Marine → Inlet	10.68%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	9.71%
Coastal	Environmental → Aquatic → Marine → Coastal	5.83%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.85%
Volcanic	Environmental → Aquatic → Marine → Volcanic	4.85%
Subtidal Zone	Environmental → Aquatic → Marine → Subtidal Zone	3.88%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.91%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.94%
Sediment	Environmental → Aquatic → Marine → Sediment	1.94%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.94%
Coral	Host-Associated → Invertebrates → Cnidaria → Coral	1.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	20.39%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	18.45%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	10.68%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	5.83%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	5.83%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.85%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	4.85%
Microbial Mats	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats	3.88%
Sediment	Environmental → Aquatic → Marine → Subtidal Zone → Sediment	3.88%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.91%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	2.91%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	2.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.91%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	1.94%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.94%
Unclassified	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.97%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.97%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	18.45%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	16.50%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	6.80%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.85%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	4.85%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	3.88%
Sediment	Environmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment	3.88%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Sediment	2.91%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	2.91%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	2.91%
Marine	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Marine	2.91%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Hydrothermal Vents	2.91%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	2.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.91%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.94%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.94%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.94%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	1.94%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.94%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	1.94%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.94%
Coral	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral	1.94%
Aquifer	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Aquifer	0.97%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.97%
Hydrothermal Chimney Microbial Mat	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Hydrothermal Chimney Microbial Mat	0.97%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000148	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 47 07/07/10 100m	Environmental	Open in IMG/M
3300000153	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 135m	Environmental	Open in IMG/M
3300000158	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 54 02/08/11 100m	Environmental	Open in IMG/M
3300000226	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 135m	Environmental	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300002242	Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey mat	Environmental	Open in IMG/M
3300002670	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI074_120m_A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300002676	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI074_135m_A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300002685	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI072_200m_A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300002686	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI072_135m_B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300002687	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI075_200m_A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300002688	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI072_100m_A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300002696	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI072_100m_B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300002881	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI073_165m_A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300002885	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI075_100m_B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300002919	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Bottom_A/KNORR_S2/LV	Environmental	Open in IMG/M
3300003478	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA	Environmental	Open in IMG/M
3300003492	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_200m_DNA	Environmental	Open in IMG/M
3300003494	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_150m_DNA	Environmental	Open in IMG/M
3300003495	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_150m_DNA	Environmental	Open in IMG/M
3300003496	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_200m_DNA	Environmental	Open in IMG/M
3300003500	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_100m_DNA	Environmental	Open in IMG/M
3300003582	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_10m_DNA	Environmental	Open in IMG/M
3300003596	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI073_LV_135m_DNA	Environmental	Open in IMG/M
3300003602	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_150m_DNA	Environmental	Open in IMG/M
3300003610	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI075_120m_B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300003885	Black smoker hydrothermal vent sediment microbial communities from the Guaymas Basin, Mid-Atlantic Ridge, South Atlantic Ocean - Sample 1	Environmental	Open in IMG/M
3300003886	Black smoker hydrothermal vent sediment microbial communities from the Guaymas Basin, Mid-Atlantic Ridge, South Atlantic Ocean - Sample 1	Environmental	Open in IMG/M
3300004007	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordC_D2	Environmental	Open in IMG/M
3300004209	Groundwater microbial communities from aquifer - Crystal Geyser CG22_combo_CG10-13_8/21/14_all	Environmental	Open in IMG/M
3300004210	Groundwater microbial communities from aquifer - Crystal Geyser CG10_big_fil_rev_8/21/14_0.10	Environmental	Open in IMG/M
3300004273	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_135m	Environmental	Open in IMG/M
3300004276	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_165m	Environmental	Open in IMG/M
3300004636	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI048_150m_RNA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005953	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_Bottom_ad_3770_LV_A	Environmental	Open in IMG/M
3300006234	Marine sediment microbial communities, 1.1 km from oil contamination, elevated hydrocarbon, Gulf of Mexico ? BC366	Environmental	Open in IMG/M
3300006468	Deep-sea sediment bacterial and archaeal communities from Fram Strait - Combined Assembly of Gp0119454, Gp0119453, Gp0119452, Gp0119451	Environmental	Open in IMG/M
3300006711	Metatranscriptome of deep ocean microbial communities from Pacific Ocean - MP2255 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental	Open in IMG/M
3300007619	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_D2_MG	Environmental	Open in IMG/M
3300007775	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D2_MG	Environmental	Open in IMG/M
3300007986	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-04	Environmental	Open in IMG/M
3300009102	Deep subsurface microbial communities from Mariana Trench to uncover new lineages of life (NeLLi) - CR04 metaG	Environmental	Open in IMG/M
3300009139	Deep subsurface microbial communities from Kermadec Trench to uncover new lineages of life (NeLLi) - N074 metaG	Environmental	Open in IMG/M
3300009408	Marine microbial mats from Loihi Seamount, Hawaii, USA. Combined Assembly of Gp0139187, Gp0139188, Gp0139189, Gp0139190, Gp0139191, Gp0139192	Environmental	Open in IMG/M
3300009515	Microbial community of beach aquifer sediment core from Cape Shores, Lewes, Delaware, USA - CF-2	Environmental	Open in IMG/M
3300009702	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV14_V59a metaG	Environmental	Open in IMG/M
3300010392	Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385	Environmental	Open in IMG/M
3300010430	Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples	Environmental	Open in IMG/M
3300010967	Microbial communities from the inside layer of the microbial mat covering an inactive hydrothermal chimney from the Kolumbo submarine volcano, Santorini, Greece - V16_c.in	Environmental	Open in IMG/M
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental	Open in IMG/M
3300011112	Deep subsurface microbial communities from Mariana Trench to uncover new lineages of life (NeLLi) - CR02 metaG	Environmental	Open in IMG/M
3300011316	Marine microbial communities from the Southern Atlantic ocean - KN S19 Bottom_A metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011321	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S12 Bottom_A metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300020231	Deep-sea sediment microbial communities from the Mariana Trench, Pacific Ocean - CR04	Environmental	Open in IMG/M
3300020234	Deep-sea sediment microbial communities from the Kermadec Trench, Pacific Ocean - N074	Environmental	Open in IMG/M
3300021342	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021359	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022209	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_13	Environmental	Open in IMG/M
3300022226	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_13	Environmental	Open in IMG/M
3300022595	Metatranscriptome of coral microbial communities from Popa Island, Bocas del Toro, Panama - APAL T2 (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300022888 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_120_MG	Environmental	Open in IMG/M
3300023481	Marine microbial mat from Loihi Seamount, Hawaii, USA - Ku'kulu Base Individual Assembly	Environmental	Open in IMG/M
3300023500	Marine microbial mat from Loihi Seamount, Hawaii, USA - Marker 39_BS4 Individual Assembly	Environmental	Open in IMG/M
3300024258 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_120_MG	Environmental	Open in IMG/M
3300024260 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_135_MG	Environmental	Open in IMG/M
3300024327 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_120_MG	Environmental	Open in IMG/M
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental	Open in IMG/M
3300025243	Marine microbial communities from the Deep Atlantic Ocean - MP0759 (SPAdes)	Environmental	Open in IMG/M
3300025614	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_200m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025622	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_150m (SPAdes)	Environmental	Open in IMG/M
3300025643	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_165m (SPAdes)	Environmental	Open in IMG/M
3300025659	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_200m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025660	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_10m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025770	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025813	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026127	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D1_MG (SPAdes)	Environmental	Open in IMG/M
3300028174	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_135	Environmental	Open in IMG/M
3300028175	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_135m	Environmental	Open in IMG/M
3300028598	Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160420 (Illumina Assembly)	Environmental	Open in IMG/M
3300028599	Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160524 (Illumina Assembly)	Environmental	Open in IMG/M
3300028600	Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160317 (Illumina Assembly)	Environmental	Open in IMG/M
3300028706	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_100m	Environmental	Open in IMG/M
3300030696	Metatranscriptome of Jellyfish Cassiopea xamachana and symbiotic dinoflagellate Symbiodinium from Pennsylvania, USA - 3_T2E_ScyKB8 developmental time series (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300030704	Metatranscriptome of Jellyfish Cassiopea xamachana and symbiotic dinoflagellate Symbiodinium from Pennsylvania, USA - 2_T1F_ScyKB8 developmental time series (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300032274	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 1	Environmental	Open in IMG/M
3300032277	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
SI47jul10_100mDRAFT_10080241	3300000148	Marine	NYCMKQQIIRNWQHSPSKTQVARTPVKAVSKSLQQSQTFTHEDLMGLSWMLSEEGD*
SI39nov09_135mDRAFT_10562311	3300000153	Marine	WQHSPSEIQVARTPVKAVSKSLQQTKPSVFSVEDLMGLSWILFEERH*
SI54feb11_100mDRAFT_10224594	3300000158	Marine	MKQQIIRNWQHSPSKTQVASTPVKAVSKSLQQTQTFTHEDLMGLSWMLSEEGD*
SI34jun09_135mDRAFT_10112761	3300000226	Marine	MKQQIIRNWQHSPSKTQVARTPVKAVSKSLQQSQTFTHEDLMGLSWMLSEEG
KVRMV2_1006738712	3300002231	Marine Sediment	MKQQIIRNWQHSPSKTQVAXXPVKEVSKSLQQSQTFTHEDLMGLSWMLSEEGD*
KVRMV2_1012479903	3300002231	Marine Sediment	MKQQIIHNWQHSPSETQVARTPVKAVSKPLQQTKPSVFSIEDLMGLSWVLFEERH*
KVWGV2_103506513	3300002242	Marine Sediment	MKQQIIHNWQHSPSEIQVARTSVIAVSKSLQQTKTQTFTNEDLMGLSWILFEERD*
Ga0005255J37291_1032391	3300002670	Marine	IIRNWQHSPSKTQVASTPVKAVSKSLQQSQTFTHEDLMGLSWMLSEEGD*
Ga0005257J37299_1010011	3300002676	Marine	QIVHNWQHSPSEIQVARTPVKAVSKSLQQTKPSVFSVEDLMGLSWILFEERH*
Ga0005237J37283_10026211	3300002685	Marine	IVHNWQHSPSEIQVARTPVKAVSKSLQQTKPSVFSVEDLMGLSWILFEERH*
Ga0005237J37283_10033241	3300002685	Marine	IRNWQHSPSKTQVASTPVKAVSKSLQQSQTFTHEDLMGLSWMLSEEGD*
Ga0005232J37287_1021141	3300002686	Marine	IIRNWQHSPSKTQVARTPVKAVSKSLQQSQTFTHEDLMGLSWMLSEEGD*
Ga0005276J37295_10047071	3300002687	Marine	RNWQHSPSKTQVASTPVKAVSKSLQQSQTFTHEDLMGLSWMLSEEGD*
Ga0005227J37284_10098971	3300002688	Marine	NWQHSPSKTQVARTPVKAVSKSLQQSQTFTHEDLMGLSWMLSEEGD*
Ga0005228J37280_10036971	3300002696	Marine	VHNWQHSPSEIQVARTPVKAVSKSLQQTKPSVFSVEDLMGLSWILFEERH*
Ga0005248J43193_10055261	3300002881	Marine	QIIRNWQHSPSKTQVARTPVKAVSKSLQQSQTFTHEDLMGLSWMLSEEGD*
Ga0005267J43198_10018931	3300002885	Marine	QIIRNWQHSPSKTQVASTPVKAVSKSLQQSQTFTHEDLMGLSWMLSEEGD*
JGI26061J44794_10051897	3300002919	Marine	MKQQIIHNWQHSPPKTQVARTPVKAVSKPLRQSQTITNEDLMGLSWIMFEESD*
JGI26238J51125_10036128	3300003478	Marine	MKQQIIRNWQHSPSKTQVARTPVKAVSKSLQQSQTFTHEDLMGLSWMLSEEGD*
JGI26238J51125_10216674	3300003478	Marine	MKQQIVHNWQHSPSEIQVARTPVKAVSKSLQQTKPSVFSIEDLMGLSWILFEERH*
JGI26245J51145_10036095	3300003492	Marine	MKQQIVHNWQHSPSEIQVARTPVKAVSKSLQQTKPSVFSXEDLMGLSWILFEERH*
JGI26245J51145_10647331	3300003492	Marine	HSPSKTQVASTPVKAVSKSLQQTQTFTHEDLMGLSWMLSEEGD*
JGI26240J51127_10120742	3300003494	Marine	MKQQIIRNWQHSPSKTQVASTPVKAVSKSLQQSQTFTHEDLMGLSWMLSEEGD*
JGI26244J51143_10064504	3300003495	Marine	MKQQIIHNWQHSPSEIQVARTPVKAVSKSLQQTKPSVFSVEDLMGLSWILFEERH*
JGI26241J51128_10066125	3300003496	Marine	MKQQIVHNWQHSPSEIQVARTPVKAVSKSLQQTKPSVFSVEDLMGLSWILFEERH*
JGI26242J51144_10264473	3300003500	Marine	MKQQIIHNWQHSPSEIQVARTPVKAVSKSLQQTKPSVFSIEDLMGLSWILFEERH*
JGI26252J51714_10442413	3300003582	Marine	KQQIIRNWQHSPSKTQVASTPVKAVSKSLQQTQTFTHEDLMGLSWMLSEEGD*
JGI26255J51710_10144734	3300003596	Marine	MKQQIIRNWQHSPSKTQVAXTPVKAVSKSLQQSQTFTHEDLMGLSWMLSEEGD*
JGI26262J51727_10034278	3300003602	Marine	MKQQIIRNWQHSPSKTQVARTPVKAVSKSLQQSQTFTHEDLMGLSWMLSEEGD
Ga0005269J51882_1017671	3300003610	Marine	HNWQHSPSEIQVARTPVKAVSKSLQQTKPSVFSVEDLMGLSWILFEERH*
Ga0063294_100890232	3300003885	Hydrothermal Vents	MKQQIIHNWQHSPSKTQVARTPVKVVSKHLQQSQTITKEDLMGISWIMFEESD*
Ga0063293_102670264	3300003886	Hydrothermal Vents	MKQQIIHNWQHSPSKTQVARTPVKAVSKHLQQSQTITKEDLMGLSWIMFEESD*
Ga0063293_102672764	3300003886	Hydrothermal Vents	MKQQIIHNWQHSPSKTQVARTPVKAVSKHLQQSQTITNEDLVGLSWLMFEESD*
Ga0055476_103355461	3300004007	Natural And Restored Wetlands	SPSKTQVAIKPVKAVSKSLRQTKSPILTNEDLMGISWILFEEKD*
Ga0066649_101104032	3300004209	Groundwater	MNQKIIHNWQHSPSETQVASNPVKAVSKSLQQTKSLVFTNEDLMGLSWILFEERH*
Ga0066639_100308871	3300004210	Groundwater	MNQKIIHNWQHSPSETQVASNPVKAVSKSLQQTKSLVFTNEDLMG
Ga0066608_10071634	3300004273	Marine	MKQQIIRNWQHSPSKTQVASTPVKEVSKSLQQSQTFTHEDLMGLSWMLSEEGD*
Ga0066610_102828712	3300004276	Marine	FMKQQIVHNWQHSPSEIQVARTPVKAVSKSLQQTKPSVFSVEDLMGLSWILFEERH*
Ga0066622_11749573	3300004636	Marine	NWQHSPSKTQVASTPVKAVSKSLQQSQTFTHEDLMGLSWMLSEEGD*
Ga0066383_101634041	3300005953	Marine	MKQQIIRNWQHSPSKTQVARIPVKAVSKPLQQSQTITKEDLMGLSWIMFEESD*
Ga0082394_1513283	3300006234	Marine	NWQHSPSKTQVARTPVKAVSKYLQQSQTLTHEDLMGLSWMLSEEGD*
Ga0082251_100142324	3300006468	Sediment	MKQQIIHNWQHSPSKTQVARTPVKAVSKPLRQSQTITNEDLMGLSWIMFEERD*
Ga0031673_10075442	3300006711	Deep Ocean	IIHNWQHSPPKTQVARTPVKAVSKPLRQSQTITNEDLMGLSWIMFEESD*
Ga0066376_103226572	3300006900	Marine	MKQQIIHNWQHLPSKTQVARTPVKAVSKPLQQSQSITNEDLMGLSWIMFEESD*
Ga0102947_10819071	3300007619	Soil	MKQQTTHNWQHSPSKTQVASNPVKAVSKSLHKAKISALASDDLMGLSWVLFEEKY*
Ga0102953_10689462	3300007775	Soil	MKQKIMQNWQHSPSKTQVAIKPVKAVSKSLRQTKSPILTNEDLMGISWVLFEEKD*
Ga0100380_102770521	3300007986	Aquifer	MNQKIIHNWQHSPSETQVASNPVKAVSKSLQQTKSLVFTNEDLMGL
Ga0114948_100696893	3300009102	Deep Subsurface	MKQQIIHNWQHSPSKTQVARTPVKAVSKPLQQSPTITNEDLMGLSWIMFEESD*
Ga0114949_100193684	3300009139	Deep Subsurface	MKQQIIHNWQHSPSKTQVARTPVKAVSKPLQQSTTITNEDLMGLSWIMFEESD*
Ga0117756_11249821	3300009408	Marine	MKQQIIHNWQHSPSKTQVARTPVKVVSKPLQQSQTITNEDLMGLSWILFEESD*
Ga0129286_100029115	3300009515	Sediment	MKQQTVHNWQHSPSKTQVASIPVKAVSKSLHQAKTPTFSSEDLMGLSWALFEERF*
Ga0114931_100209426	3300009702	Deep Subsurface	MKQQTIHNWQHSPSKTQVASIPEKAVPKSLLQPKTSTFSSEDLMGLSWTLFEERD*
Ga0114931_105099541	3300009702	Deep Subsurface	MKQQTVHNWQHSPSKTQVASNPVKAVSKSLHQSQTHTFSIEDLMGLTWVLFEERC*
Ga0118731_1105625871	3300010392	Marine	NWQHSPSETQVASNPVKVVSKSLQQTKLSIFSMEDLMGLSWVLFEEKY*
Ga0118731_1105936831	3300010392	Marine	MKQQIMHNWQHSPSKTQVASNPVKAVSKSLQQEKPSTLSCKDLMGLSWVL
Ga0118733_1005302332	3300010430	Marine Sediment	MKQQITHNWQHSPSKTQVASNPVKAVSKSLQQTKLSIFSMEDLMGLSWVLFEEKY*
Ga0139247_10092935	3300010967	Hydrothermal Chimney Microbial Mat	MKQQIIRNWQHSPSKTQVARIPVKAVSKSLQQSQTFTHEDLMGLSWMLSEEGD*
Ga0114934_100073814	3300011013	Deep Subsurface	MKQQIMHNWQHSPSEIQVARTPVKAVSKPLQQTKSQAFTNEDLMGLSWILFEERN*
Ga0114947_109607051	3300011112	Deep Subsurface	MKQQIIHNWQHSPSEIQVAINPVKAVSKPLQQSQTITNEDLMGLSWIMFEESD*
Ga0138399_10121891	3300011316	Marine	KTQVARTPVKAVSKPLRQSQTITNEDLMGLSWIMFEESD*
Ga0138361_11557751	3300011321	Marine	HNWQHSPPKTQVARTPVKAVSKPLRQSQTITNEDLMGLSWIMFEESD*
Ga0212168_12618213	3300020231	Sediment	MKQQIIHNWQHSPSKTQVARTPVKAVSKPLQQSPTITNEDLMGLSWIMFEESD
Ga0212227_12230994	3300020234	Sediment	MKQQIIHNWQHSPSKTQVARTPVKAVSKPLQQSTTITNEDLMGLSWIMFEESD
Ga0206691_10372261	3300021342	Seawater	IHNWQHSPPKTQVARTPVKAVSKPLRQSQTITNEDLMGLSWIMFEESD
Ga0206689_103402961	3300021359	Seawater	IVQNWQHSPPKTQVTSNPVKAVPKALKQTESLSFTNKNLMDLSWILFEERD
Ga0224497_1000012744	3300022209	Sediment	MKQQTMHNWQHSPSKTQVASNPVKAVSKSLHKDKTPTFSTEDLMGLTWVLFEERY
Ga0224512_100321764	3300022226	Sediment	MKQQTVHNWQHSPSKTQVASIPVKAVSKSLHQAKTPTFSSEDLMGLSWALFEERF
Ga0215184_10061991	3300022595	Coral	VQNWQHSPSETQVARNPEKAVPKTLQQTKMSAFSNEDLMGLSWILFEERN
Ga0215184_12423361	3300022595	Coral	TVQNWQHSPSETQVARNPEKAVPKTLQQTKPPTFSNKDLMGLSWILFEERE
(restricted) Ga0233428_10085313	3300022888	Seawater	MKQQIIHNWQHSPSEIQVARTPVKAVSKSLQQTKPSVFSIEDLMGLSWILFEERH
(restricted) Ga0233428_10219284	3300022888	Seawater	MKQQIIRNWQHSPSKTQVASTPVKEVSKSLQQSQTFTHEDLMGLSWMLSEEGD
(restricted) Ga0233428_10832391	3300022888	Seawater	MKQQIIRNWQHSPSKTQVASTPVKAVSKSLQQSQTFTHEDLMGLSWMLSEEGD
(restricted) Ga0233428_11165413	3300022888	Seawater	MKQQIVHNWQHSPSEIQVARTPVKAVSKSLQQTKPSVFSVEDLMGLSWILFEERH
Ga0257022_10084424	3300023481	Marine	MKQQIIHNWQHSPSKTQVARTPVKVVSKPLQQSQTITNEDLMGLSWILFEESD
Ga0257021_10524373	3300023500	Marine	MKQQIAHNWQHSPSEIQVARTPVKAVSKSLQQTKSSVFSIEDLMGLSWILFEERH
(restricted) Ga0233440_10489091	3300024258	Seawater	LFMKQQIVHNWQHSPSEIQVARTPVKAVSKSLQQTKPSVFSIEDLMGLSWILFEERH
(restricted) Ga0233441_12073111	3300024260	Seawater	FMKQQIVHNWQHSPSEIQVARTPVKAVSKSLQQTKPSVFSIEDLMGLSWILFEERH
(restricted) Ga0233434_10244139	3300024327	Seawater	MKQQIAHNWQHSPSEIQVARTPVKAVSKSLQQTKPSVFSIEDLMGLSWILFEERH
Ga0209992_100015245	3300024344	Deep Subsurface	MKQQIIRNWQHSPSKTQVARIPVKAVSKSLQQSQTFTHEDLMGLSWMLSEEGD
Ga0209992_100086178	3300024344	Deep Subsurface	MKQQIMHNWQHSPSEIQVARTPVKAVSKPLQQTKSQAFTNEDLMGLSWILFEERN
Ga0208335_100073314	3300025243	Deep Ocean	MKQQIIHNWQHSPPKTQVARTPVKAVSKPLRQSQTITNEDLMGLSWIMFEESD
Ga0209665_10074731	3300025614	Marine	MKQQIIRNWQHSPSKTQVARTPVKAVSKSLQQSQTFTHEDLMGLS
Ga0209264_11059442	3300025622	Marine	MKQQIIRNWQHSPSKTQVASTPVKEVSKSLQQSQTFTHEDLMGLSWMLSE
Ga0209151_11455411	3300025643	Marine	MKQQIIHNWQHSPSEIQVARTPVKAVSKSLQQTKPSVFSIEDLMGLSWIL
Ga0209249_11166001	3300025659	Marine	RFNYCMKQQIIRNWQHSPSKTQVARTPVKAVSKSLQQSQTFTHEDLMGLSWMLSEEGD
Ga0209045_10123255	3300025660	Marine	MKQQIIRNWQHSPSKTQVASTPVKAVSKSLQQTQTFTHEDLMGLSWMLSEEGD
Ga0209362_12220382	3300025770	Marine	MKQQIIRNWQHSPSKTQVASTPVKEVSKSLQQSQTFTHEDLMGLS
Ga0210064_10218482	3300025813	Natural And Restored Wetlands	MKQKIMQNWQHSPSKTQVAIKPVKAVSKSLQQTKSSILTNEDLMGISWILFEEKD
Ga0209956_10656622	3300026127	Soil	MKQKIMQNWQHSPSKTQVAIKPVKAVSKSLRQTKSPILTNEDLMGISWILFEEKD
Ga0257123_11082042	3300028174	Marine	MKQQIIRNWQHSPSKTQVASTPVKAVSKSLQQSQTFTHEDLMGLSW
Ga0257117_10302641	3300028175	Marine	MKQQIIRNWQHSPSKTQVASTPVKEVSKSLQQSQTFTHEDLMGLSWML
Ga0257117_10960451	3300028175	Marine	MKQQIIRNWQHSPSKTQVARTPVKAVSKSLQQSQTFTHEDLMGLSW
Ga0265306_103101672	3300028598	Sediment	MKQQIMHNWQHSPSETQVASNPVKAVSKPLQQTKQDVFSIDDLMGLSWILFEEKD
Ga0265309_106228733	3300028599	Sediment	RLNFVMKQQIMHNWQHSPSETQVASNPVKAVSKPLQQTKPITFSVEDLMGLSWVLFEEKK
Ga0265303_111208242	3300028600	Sediment	MKQQIMHNWQHSPSETQVASNPVKAVSKPLQQTKPITFSVEDLMGLSWVL
Ga0265303_111505712	3300028600	Sediment	MKQQIMYNWQHSPSKTQVASNPVKAVSKPLQQTKPITFSVEDLMGLSWVLFEEKE
Ga0257115_10085354	3300028706	Marine	MKQQIVHNWQHSPSEIQVARTPVKAVSKSLQQTKPSVFSIEDLMGLSWILFEERH
Ga0187728_10190843	3300030696	Host-Associated	SPSDNQVVRNPVKAVSKSMSQKPLLSMEDLMGLTWVLFEERY
Ga0187727_10036773	3300030704	Host-Associated	NWQHSPSDNQVVRNPVKAVSKSMSQKPLLSMEDLMGLTWVLFEERY
Ga0316203_11753551	3300032274	Microbial Mat	MKQQIMHNWQHSPSKTQVASNPVKAVSKPLQQTKQDVFSIEDLMGLSWILFEERD
Ga0316202_103704982	3300032277	Microbial Mat	MKQQIMHNWQHSPSETQVASNPVKAVSKPLQQAKPVTFSVEDLMGLSWVLFEERK
Ga0316202_105294491	3300032277	Microbial Mat	MKQQIIHDWQHSPSETQVASNPVKAVSKTLQQTKQDKFSIEDLMGLSWILFEERD
Ga0214471_106483613	3300033417	Soil	NWQHSPTEIQVASSPVKAVSKSLHHAKTPTFSTEDLMGLTWTLFEERY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters