Metagenome Family F085813

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085813
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	56 residues
Representative Sequence	MDQFEIIWILVTVIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGL
Number of Associated Samples	80
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.90 %
% of genes near scaffold ends (potentially truncated)	38.74 %
% of genes from short scaffolds (< 2000 bps)	63.06 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.955 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine (27.928 % of family members)
Environment Ontology (ENVO)	Unclassified (86.486 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (88.288 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 85.71% β-sheet: 0.00% Coil/Unstructured: 14.29%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF03600	CitMHS	7.21
PF03372	Exo_endo_phos	5.41
PF03449	GreA_GreB_N	2.70
PF00326	Peptidase_S9	2.70
PF00034	Cytochrom_C	1.80
PF07661	MORN_2	1.80
PF13238	AAA_18	1.80
PF03239	FTR1	0.90
PF12799	LRR_4	0.90
PF00930	DPPIV_N	0.90
PF01965	DJ-1_PfpI	0.90
PF00079	Serpin	0.90
PF00146	NADHdh	0.90
PF03783	CsgG	0.90
PF08241	Methyltransf_11	0.90
PF00014	Kunitz_BPTI	0.90
PF02325	YGGT	0.90
PF03960	ArsC	0.90
PF12697	Abhydrolase_6	0.90
PF01070	FMN_dh	0.90
PF05960	DUF885	0.90
PF03029	ATP_bind_1	0.90
PF00939	Na_sulph_symp	0.90
PF00144	Beta-lactamase	0.90
PF09972	DUF2207	0.90
PF03992	ABM	0.90
PF05656	DUF805	0.90
PF04264	YceI	0.90
PF00266	Aminotran_5	0.90
PF13385	Laminin_G_3	0.90
PF13860	FlgD_ig	0.90
PF04191	PEMT	0.90
PF01636	APH	0.90
PF03781	FGE-sulfatase	0.90
PF00903	Glyoxalase	0.90
PF01436	NHL	0.90
PF00929	RNase_T	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	2.70
COG2849	Antitoxin component YwqK of the YwqJK toxin-antitoxin module	Defense mechanisms [V]	1.80
COG1393	Arsenate reductase or related protein, glutaredoxin family	Inorganic ion transport and metabolism [P]	0.90
COG4826	Serine protease inhibitor	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.90
COG3152	Uncharacterized membrane protein YhaH, DUF805 family	Function unknown [S]	0.90
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.90
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.90
COG2229	Signal recognition particle receptor subunit beta, a GTPase	Intracellular trafficking, secretion, and vesicular transport [U]	0.90
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.90
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.90
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.90
COG1462	Curli biogenesis system outer membrane secretion channel CsgG	Cell wall/membrane/envelope biogenesis [M]	0.90
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.90
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.90
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG1100	GTPase SAR1 family domain	General function prediction only [R]	0.90
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	0.90
COG1005	NADH:ubiquinone oxidoreductase subunit 1 (chain H)	Energy production and conversion [C]	0.90
COG0823	Periplasmic component TolB of the Tol biopolymer transport system	Intracellular trafficking, secretion, and vesicular transport [U]	0.90
COG0762	Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG0650	Formate hydrogenlyase subunit HyfC	Energy production and conversion [C]	0.90
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
All Organisms	root	All Organisms	45.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
cellular organisms	root	All Organisms → cellular organisms	45.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.24 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	16.22 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	12.61 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	1.80 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.80 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	9.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.80 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.80 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.90 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.90 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	9.91 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.80 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.90 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.90 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	9.91 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.80 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.90 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	9.91 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.80 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.90 %
Flammeovirgaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae	0.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	9.91 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.80 %
unclassified Flammeovirgaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae → unclassified Flammeovirgaceae	0.90 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	0.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	9.91 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.80 %
Flammeovirgaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae → unclassified Flammeovirgaceae → Flammeovirgaceae bacterium	0.90 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000140\|LPfeb09P26500mDRAFT_c1015448	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	893	Open in IMG/M
3300000141\|LPjun08P41300mDRAFT_c1002337	Not Available	3950	Open in IMG/M
3300000157\|LPaug08P261000mDRAFT_c1015397	Not Available	1157	Open in IMG/M
3300000163\|LPjun09P162000mDRAFT_c1004324	All Organisms → cellular organisms → Bacteria	2997	Open in IMG/M
3300000190\|LPjun09P161000mDRAFT_c1043159	Not Available	669	Open in IMG/M
3300000219\|LPfeb10P161000mDRAFT_c1069089	Not Available	536	Open in IMG/M
3300000259\|LP_J_08_P26_500DRAFT_1003143	Not Available	2951	Open in IMG/M
3300000260\|LP_A_09_P20_500DRAFT_1024717	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300000950\|JGI11881J13070_1000322	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	5189	Open in IMG/M
3300000974\|JGI12031J13088_104174	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	881	Open in IMG/M
3300001576\|JGI12145J15760_102804	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300001579\|JGI11834J15748_1014232	Not Available	521	Open in IMG/M
3300001581\|JGI11757J15750_1003015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2068	Open in IMG/M
3300001582\|JGI11905J15746_1011750	Not Available	700	Open in IMG/M
3300001678\|Mariner_1009311	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	3377	Open in IMG/M
3300001768\|supr62_1005641	Not Available	3149	Open in IMG/M
3300001781\|Deep_1014444	Not Available	3788	Open in IMG/M
3300001781\|Deep_1087977	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	535	Open in IMG/M
3300001840\|shallow_1015721	Not Available	2231	Open in IMG/M
3300002526\|JGI24818J35693_1001662	All Organisms → cellular organisms → Bacteria	4787	Open in IMG/M
3300002919\|JGI26061J44794_1007456	All Organisms → cellular organisms → Bacteria	3209	Open in IMG/M
3300002919\|JGI26061J44794_1018564	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1598	Open in IMG/M
3300003537\|FS903DNA_1010130	Not Available	2771	Open in IMG/M
3300003538\|FS904DNA_1132504	Not Available	718	Open in IMG/M
3300003539\|FS891DNA_10075442	Not Available	1056	Open in IMG/M
3300003702\|PicMicro_10029330	All Organisms → cellular organisms → Bacteria	7008	Open in IMG/M
3300005399\|Ga0066860_10180806	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae → unclassified Flammeovirgaceae → Flammeovirgaceae bacterium	722	Open in IMG/M
3300005399\|Ga0066860_10259360	Not Available	580	Open in IMG/M
3300005402\|Ga0066855_10176766	Not Available	689	Open in IMG/M
3300005402\|Ga0066855_10323962	Not Available	509	Open in IMG/M
3300005423\|Ga0066828_10206685	Not Available	647	Open in IMG/M
3300005594\|Ga0066839_10090675	Not Available	1059	Open in IMG/M
3300005594\|Ga0066839_10342195	Not Available	516	Open in IMG/M
3300005945\|Ga0066381_10237783	Not Available	524	Open in IMG/M
3300005953\|Ga0066383_10072283	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300006002\|Ga0066368_10131895	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	857	Open in IMG/M
3300006002\|Ga0066368_10233556	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300006002\|Ga0066368_10309242	Not Available	535	Open in IMG/M
3300006012\|Ga0066374_10204911	Not Available	577	Open in IMG/M
3300006091\|Ga0082018_1058993	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	692	Open in IMG/M
3300006308\|Ga0068470_1104781	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300006310\|Ga0068471_1072727	Not Available	8652	Open in IMG/M
3300006313\|Ga0068472_10151486	Not Available	4321	Open in IMG/M
3300006313\|Ga0068472_10281478	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	2024	Open in IMG/M
3300006313\|Ga0068472_10535630	Not Available	615	Open in IMG/M
3300006313\|Ga0068472_10560685	Not Available	705	Open in IMG/M
3300006316\|Ga0068473_1391374	Not Available	717	Open in IMG/M
3300006316\|Ga0068473_1514032	Not Available	782	Open in IMG/M
3300006323\|Ga0068497_1253084	Not Available	525	Open in IMG/M
3300006326\|Ga0068477_1115987	All Organisms → cellular organisms → Bacteria	3278	Open in IMG/M
3300006326\|Ga0068477_1145610	Not Available	1085	Open in IMG/M
3300006326\|Ga0068477_1166214	All Organisms → cellular organisms → Bacteria	3079	Open in IMG/M
3300006330\|Ga0068483_1271891	Not Available	503	Open in IMG/M
3300006331\|Ga0068488_1307841	Not Available	560	Open in IMG/M
3300006335\|Ga0068480_1107012	All Organisms → cellular organisms → Bacteria	7716	Open in IMG/M
3300006338\|Ga0068482_1133119	All Organisms → cellular organisms → Bacteria	8403	Open in IMG/M
3300006338\|Ga0068482_1223354	All Organisms → cellular organisms → Bacteria	3477	Open in IMG/M
3300006338\|Ga0068482_1511058	Not Available	639	Open in IMG/M
3300006338\|Ga0068482_1687513	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	652	Open in IMG/M
3300006339\|Ga0068481_1251498	All Organisms → cellular organisms → Bacteria	2418	Open in IMG/M
3300006340\|Ga0068503_10198109	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	9327	Open in IMG/M
3300006340\|Ga0068503_10208827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5658	Open in IMG/M
3300006340\|Ga0068503_10213798	All Organisms → cellular organisms → Bacteria	2244	Open in IMG/M
3300006340\|Ga0068503_10446219	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300006340\|Ga0068503_11126326	Not Available	536	Open in IMG/M
3300006341\|Ga0068493_10256090	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	2135	Open in IMG/M
3300006341\|Ga0068493_10311290	All Organisms → cellular organisms → Bacteria	2198	Open in IMG/M
3300006341\|Ga0068493_10449127	Not Available	695	Open in IMG/M
3300006341\|Ga0068493_10606002	Not Available	765	Open in IMG/M
3300006346\|Ga0099696_1055904	Not Available	834	Open in IMG/M
3300006346\|Ga0099696_1078660	Not Available	900	Open in IMG/M
3300006347\|Ga0099697_1115587	Not Available	2118	Open in IMG/M
3300006347\|Ga0099697_1289969	Not Available	820	Open in IMG/M
3300006654\|Ga0101728_103932	All Organisms → cellular organisms → Bacteria	7206	Open in IMG/M
3300006900\|Ga0066376_10133975	All Organisms → cellular organisms → Bacteria → FCB group	1521	Open in IMG/M
3300007756\|Ga0105664_1068098	Not Available	1293	Open in IMG/M
3300008249\|Ga0105353_1087687	Not Available	763	Open in IMG/M
3300009622\|Ga0105173_1092843	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300020263\|Ga0211679_1047003	Not Available	764	Open in IMG/M
3300020272\|Ga0211566_1004682	All Organisms → cellular organisms → Bacteria	4120	Open in IMG/M
3300020298\|Ga0211657_1003746	Not Available	4697	Open in IMG/M
3300020369\|Ga0211709_10133136	Not Available	760	Open in IMG/M
3300021973\|Ga0232635_1104603	Not Available	672	Open in IMG/M
3300021978\|Ga0232646_1011773	Not Available	3393	Open in IMG/M
3300021978\|Ga0232646_1145555	Not Available	799	Open in IMG/M
3300025192\|Ga0208064_105333	Not Available	1205	Open in IMG/M
3300025210\|Ga0208058_1047292	Not Available	537	Open in IMG/M
3300025215\|Ga0207920_1053277	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300025219\|Ga0208470_1042267	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	653	Open in IMG/M
3300025221\|Ga0208336_1007346	Not Available	2369	Open in IMG/M
3300025221\|Ga0208336_1045335	Not Available	660	Open in IMG/M
3300025232\|Ga0208571_1021133	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	988	Open in IMG/M
3300025238\|Ga0208830_1021720	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1273	Open in IMG/M
3300025240\|Ga0208203_1048777	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300025243\|Ga0208335_1000959	Not Available	8845	Open in IMG/M
3300025243\|Ga0208335_1003867	All Organisms → cellular organisms → Bacteria	3211	Open in IMG/M
3300025249\|Ga0208570_1003510	All Organisms → cellular organisms → Bacteria	3339	Open in IMG/M
3300025255\|Ga0208471_1001289	Not Available	7259	Open in IMG/M
3300025269\|Ga0208568_1027419	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	901	Open in IMG/M
3300026108\|Ga0208391_1015225	Not Available	2309	Open in IMG/M
3300026108\|Ga0208391_1112132	Not Available	542	Open in IMG/M
3300026204\|Ga0208521_1042488	Not Available	1351	Open in IMG/M
3300026213\|Ga0208131_1079037	Not Available	804	Open in IMG/M
3300026253\|Ga0208879_1018348	All Organisms → cellular organisms → Bacteria	4118	Open in IMG/M
3300026262\|Ga0207990_1010130	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	3277	Open in IMG/M
3300027630\|Ga0209432_1004609	Not Available	3336	Open in IMG/M
3300027630\|Ga0209432_1130443	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300027685\|Ga0209554_1041669	All Organisms → cellular organisms → Bacteria → FCB group	1739	Open in IMG/M
3300028488\|Ga0257113_1032571	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1720	Open in IMG/M
3300028488\|Ga0257113_1050953	Not Available	1332	Open in IMG/M
3300032360\|Ga0315334_10765921	Not Available	835	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	83.78%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	10.81%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.50%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	45.05%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	28.83%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	9.01%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.50%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	3.60%
Abyssal Plane	Environmental → Aquatic → Marine → Oceanic → Abyssal Plane	0.90%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.90%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	0.90%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	27.93%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	24.32%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	18.02%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	9.01%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.60%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	3.60%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	2.70%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.80%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Fluids	1.80%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	0.90%
Background Seawater	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater	0.90%
Marine	Environmental → Aquatic → Marine → Oceanic → Abyssal Plane → Marine	0.90%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.90%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	0.90%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.90%
Marine, Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Marine, Hydrothermal Vent Plume	0.90%
Black Smokers Hydrothermal Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000140	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - February 2009 P26 500m	Environmental	Open in IMG/M
3300000141	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P4 1300m	Environmental	Open in IMG/M
3300000157	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2008 P26 1000m	Environmental	Open in IMG/M
3300000163	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P16 2000m	Environmental	Open in IMG/M
3300000190	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P16 1000m	Environmental	Open in IMG/M
3300000219	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - February 2010 P16 1000m	Environmental	Open in IMG/M
3300000259	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_J_08_P26_500	Environmental	Open in IMG/M
3300000260	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P20_500	Environmental	Open in IMG/M
3300000950	Marine microbial communities from the Deep Atlantic Ocean - MP0441	Environmental	Open in IMG/M
3300000974	Marine microbial communities from the Deep Atlantic Ocean - MP1092	Environmental	Open in IMG/M
3300001576	Marine microbial communities from the Deep Pacific Ocean - MP2053	Environmental	Open in IMG/M
3300001579	Marine microbial communities from the Deep Atlantic Ocean - MP0740	Environmental	Open in IMG/M
3300001581	Marine microbial communities from the Deep Atlantic Ocean - MP0759	Environmental	Open in IMG/M
3300001582	Marine microbial communities from the Deep Pacific Ocean - MP1788	Environmental	Open in IMG/M
3300001678	Black smokers hydrothermal plume microbial communities from Mariner, Lau Basin, Pacific Ocean -IDBA	Environmental	Open in IMG/M
3300001768	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Deep Background Supr62	Environmental	Open in IMG/M
3300001781	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Deep Sites	Environmental	Open in IMG/M
3300001840	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Shallow Sites - gte1kb - lt4kb	Environmental	Open in IMG/M
3300002526	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_550m	Environmental	Open in IMG/M
3300002919	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Bottom_A/KNORR_S2/LV	Environmental	Open in IMG/M
3300003537	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS903_Marker113_DNA	Environmental	Open in IMG/M
3300003538	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS904_Marker33_DNA	Environmental	Open in IMG/M
3300003539	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS891_Anemone_DNA	Environmental	Open in IMG/M
3300003702	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Microbial Assembly	Environmental	Open in IMG/M
3300005399	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F14-07SV275	Environmental	Open in IMG/M
3300005402	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73	Environmental	Open in IMG/M
3300005423	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47	Environmental	Open in IMG/M
3300005594	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV82	Environmental	Open in IMG/M
3300005945	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_AAIW_ad_876m_LV_B	Environmental	Open in IMG/M
3300005953	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_Bottom_ad_3770_LV_A	Environmental	Open in IMG/M
3300006002	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A	Environmental	Open in IMG/M
3300006012	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_AAIW_ad_750m_LV_A	Environmental	Open in IMG/M
3300006091	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP125	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental	Open in IMG/M
3300006316	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_1000m	Environmental	Open in IMG/M
3300006323	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0500m	Environmental	Open in IMG/M
3300006326	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0770m	Environmental	Open in IMG/M
3300006330	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_1000m	Environmental	Open in IMG/M
3300006331	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_1000m	Environmental	Open in IMG/M
3300006335	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500m	Environmental	Open in IMG/M
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental	Open in IMG/M
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental	Open in IMG/M
3300006346	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0770m	Environmental	Open in IMG/M
3300006347	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000m	Environmental	Open in IMG/M
3300006654	Combined Assembly of Gp0125100, Gp0113270, Gp0125099	Environmental	Open in IMG/M
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental	Open in IMG/M
3300007756	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDBack_2015_DNA CLC_assembly	Environmental	Open in IMG/M
3300008249	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN10B Hudson Canyon	Environmental	Open in IMG/M
3300009622	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155	Environmental	Open in IMG/M
3300020263	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX555942-ERR599125)	Environmental	Open in IMG/M
3300020272	Marine microbial communities from Tara Oceans - TARA_B100001971 (ERX556120-ERR599127)	Environmental	Open in IMG/M
3300020298	Marine microbial communities from Tara Oceans - TARA_B100000953 (ERX556051-ERR599128)	Environmental	Open in IMG/M
3300020369	Marine microbial communities from Tara Oceans - TARA_B100000446 (ERX556016-ERR599044)	Environmental	Open in IMG/M
3300021973	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Alice_FS923 _150kmer	Environmental	Open in IMG/M
3300021978	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Perseverance_CTD_V16A_01_btl17 _150kmer	Environmental	Open in IMG/M
3300025192	Marine microbial communities from the Deep Atlantic Ocean - MP0145 (SPAdes)	Environmental	Open in IMG/M
3300025210	Marine microbial communities from the Deep Atlantic Ocean - MP1092 (SPAdes)	Environmental	Open in IMG/M
3300025215	Marine microbial communities from the Deep Atlantic Ocean - MP0204 (SPAdes)	Environmental	Open in IMG/M
3300025219	Marine microbial communities from the Deep Atlantic Ocean - MP0740 (SPAdes)	Environmental	Open in IMG/M
3300025221	Marine microbial communities from the Deep Atlantic Ocean - MP0372 (SPAdes)	Environmental	Open in IMG/M
3300025232	Marine microbial communities from the Deep Atlantic Ocean - MP0103 (SPAdes)	Environmental	Open in IMG/M
3300025238	Marine microbial communities from the Deep Atlantic Ocean - MP2634 (SPAdes)	Environmental	Open in IMG/M
3300025240	Marine microbial communities from the Deep Atlantic Ocean - MP2914 (SPAdes)	Environmental	Open in IMG/M
3300025243	Marine microbial communities from the Deep Atlantic Ocean - MP0759 (SPAdes)	Environmental	Open in IMG/M
3300025249	Marine microbial communities from the Deep Indian Ocean - MP1202 (SPAdes)	Environmental	Open in IMG/M
3300025255	Marine microbial communities from the Deep Atlantic Ocean - MP0441 (SPAdes)	Environmental	Open in IMG/M
3300025269	Marine microbial communities from the Deep Atlantic Ocean - MP2969 (SPAdes)	Environmental	Open in IMG/M
3300026108	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_Bottom_ad_3770_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026204	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47 (SPAdes)	Environmental	Open in IMG/M
3300026213	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73 (SPAdes)	Environmental	Open in IMG/M
3300026253	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026262	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75 (SPAdes)	Environmental	Open in IMG/M
3300027630	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_800m (SPAdes)	Environmental	Open in IMG/M
3300027685	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Bottom_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300028488	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1320m	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPfeb09P26500mDRAFT_10154482	3300000140	Marine	MDQFEIIWIFVTVIGALNYGLNAYQRGFRRQLKWDVIFLIILNTLMFVPLSLIVGL*
LPjun08P41300mDRAFT_10023376	3300000141	Marine	MDQIEIIWILVTGIGALNYGLYAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGLEFAN
LPaug08P261000mDRAFT_10153971	3300000157	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGLEFAN
LPjun09P162000mDRAFT_10043243	3300000163	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRRLKWDVIFLIILNTLMFVPLSLIVGLS*
LPjun09P161000mDRAFT_10431591	3300000190	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGL*
LPfeb10P161000mDRAFT_10690892	3300000219	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRRLKWDVIFLIILNTLMFVPLSLIVGLEFAN
LP_J_08_P26_500DRAFT_10031433	3300000259	Marine	MDQIEIIWILVTGIGALNYGLYAYQKGFRRLLKWDVIFLIILNTLIFVPLSLIVGLEFAN
LP_A_09_P20_500DRAFT_10247172	3300000260	Marine	ALNYGLNAYQRGFRRQLKWDVIFLIILNTLMFVPLSLIVGL*
JGI11881J13070_10003227	3300000950	Deep Ocean	MDQFEIIWILVTVIGALNYGFNAYQKGFRRLLKWDVISLIILDTLMFVPLSLIVGL*
JGI12031J13088_1041742	3300000974	Deep Ocean	MDQFEIIWILATVIGALNYGLNAYQKGFRRLLKWDVIFLIVLNTLMFVPLSLIVGL*
JGI12145J15760_1028042	3300001576	Deep Ocean	MDQIEIIWILVTVIGALNYGLNAYQKGFRRLLKWDVIFLIVLNTLMFVPLSLIVGL*
JGI11834J15748_10142322	3300001579	Deep Ocean	MDQIEIIWILVTGIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGLS*
JGI11757J15750_10030152	3300001581	Deep Ocean	LNYGLNAYQKGFRRLLKWDVIFLIVLNTLMFVPLSLIVGL*
JGI11905J15746_10117502	3300001582	Deep Ocean	MDQFEIIWILVTVIGALNYGFNAYQKGFRRLLKWDVISLIILDTLMFVPLSLIF*
Mariner_10093111	3300001678	Black Smokers Hydrothermal Plume	VTRMDQFEIIWILVTVIGALNYGLNAYQKGFRRRLKWDVIFLIILNTLMFVPLSLIVGLS
supr62_10056412	3300001768	Hydrothermal Vent Plume	MDQFEIIWILATVIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGVR*
Deep_10144441	3300001781	Hydrothermal Vent Plume	CVTRMDQFEIIWILATVIGALNYGLNAYQKGFRRLLKWDVIYLIILNTLMFVPLSLIVVL
Deep_10879771	3300001781	Hydrothermal Vent Plume	CVTRMDQFEIIWILATVIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVVL
shallow_10157211	3300001840	Hydrothermal Vent Plume	CNLKNNCVTKMDEFEIIWILVTVIGALNYGLNAYQKGFRRLLKWDVIYLIILNTLMFVPLSLIVVF*
JGI24818J35693_10016621	3300002526	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRRLKWDVIFLIILNTLMFVPLSLIALIALDKE*
JGI26061J44794_10074561	3300002919	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRLLKWDVIFLIVLNTLMFVPLSLIVGL*
JGI26061J44794_10185643	3300002919	Marine	MDQFEIIWIXVTVIGALNYGFNAYQKGFRRLLKWDVIFLIILDTLMFVPLSLIVGL*
FS903DNA_10101303	3300003537	Diffuse Hydrothermal Flow Volcanic Vent	MDQIEIIWILVTGIGALNYGLNAYQKGFRRRLKWDVIFLIILNTLMFVPLSLIVGL*
FS904DNA_11325042	3300003538	Diffuse Hydrothermal Flow Volcanic Vent	MDQIEIIWILVTGNGALNYGLYAYQKGFRRLLKWDVIFLIILYTLMFVPLSLIVGLEFAN
FS891DNA_100754422	3300003539	Diffuse Hydrothermal Flow Volcanic Vent	GALNYGLYAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGLEFAN*
PicMicro_100293307	3300003702	Marine, Hydrothermal Vent Plume	MDQIEIIWILVTVIGALNYGLNAYQKGFRRRLKWDVIFLIILNTLMFVPLSLIWGFNSVR
Ga0066860_101808061	3300005399	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRLLKWDVIFLKILNTLMFVPLSLIVGL*
Ga0066860_102593602	3300005399	Marine	MDQFEIIWILVTVIGALNYGFNAYQKGFRRLLKWDVIFLIILDTLMFVPLSLIVGL*
Ga0066855_101767662	3300005402	Marine	MDQFEIIWILVIVIGALNYDLNAYQKGFRRLLKWGVIFLIILNTLMFVPLSLIVGLFCL*
Ga0066855_103239621	3300005402	Marine	MDQIEIIWILVTGNGALNYGLYAYQKGFRRLLKWDVIFLIILNTLMFVPLSLI
Ga0066828_102066852	3300005423	Marine	LVTVIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGL*
Ga0066839_100906752	3300005594	Marine	LVTVIGALNYGLNAYQKGFRRRLKWDVIFLIILNTLMFVPLSLIWGFNSVR*
Ga0066839_103421951	3300005594	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRRLKWDVIFLIILNTLMFVP
Ga0066381_102377832	3300005945	Marine	MDQFEIIWILVTVIGALNYDLNAYQKGFRRLLKWGVIFLIILNTLMFVPLS
Ga0066383_100722833	3300005953	Marine	IGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGLS*
Ga0066368_101318953	3300006002	Marine	NNCVTRMDQFEIIWILVTVIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGL*
Ga0066368_102335561	3300006002	Marine	MDQFEIIWILATVIGALNYGLNAYQKGFRRLLKWDVIYLIILNTLMFVPLSLIVVF*
Ga0066368_103092421	3300006002	Marine	VTVIGALNYGLNAYQKGFRRRLKWDVIFLIILNALMFVPLSLIVGLY*
Ga0066374_102049111	3300006012	Marine	NLKNNCVTRMDQIEIIWILVTGIGALNYGLYAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGL*
Ga0082018_10589931	3300006091	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRLLKWNVIFLIILNTLMFVPLSLIVGL*
Ga0068470_11047813	3300006308	Marine	MDQFEIIWILVIVIGALNYDLNAYQKGFRRLLKWGVIFLIILNTLMFVPLSLIVGLEFAN
Ga0068471_10727277	3300006310	Marine	MDQIEIIWILVTGIGALNYGLYAYQKGFRRLLKWDVIFLIILNTLMYVPLSLIVGLEFAN
Ga0068472_101514863	3300006313	Marine	MDQIEIIWILVTGIGALNYGLNAYQKGFRRLLKWDAILLIILNTLMFVPLSLIWGFNSVR
Ga0068472_102814782	3300006313	Marine	MDQFEIIWILVTVIGALNYGLYAYQKGFRRLLKWDVIFLLNTLMFVPLSLIVGLEFAN*
Ga0068472_105356302	3300006313	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRRLKWDVIFLIILNTLMFVPLSLIVGL*
Ga0068472_105606852	3300006313	Marine	MDQFEIIWILVTVIGALNYDLNAYQKGFRRLLKWGVIFLIILNTLMFVPLSLIVGLYCL*
Ga0068473_13913742	3300006316	Marine	MDQFEIIWILVRVIGALNYGLNAYQKGFRRLLKWGFIFLLILNTLMFVPLSLIVGL*
Ga0068473_15140321	3300006316	Marine	ILVTVIGALNYDLNAYQKGFRRLLKWGGIFLIILNTLMFVPLSLIVGL*
Ga0068497_12530842	3300006323	Marine	MDQFEIIWILVIVIGALNYGLNAYQKGFRRLLKWGVIFLIILNTLMFVPLSLIWGFNSVR
Ga0068477_11159874	3300006326	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRLLKWGVIFLIILNTLMFVPLSLIWGFNSVR
Ga0068477_11456103	3300006326	Marine	SIANCVTRMDQFEIIWILVIVIGVLNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGL*
Ga0068477_11662142	3300006326	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRRLKWDVIFLILNTLMFVPLSLIWGFNSVR*
Ga0068483_12718911	3300006330	Marine	MDQIEIIWILVTGIGALNYGLYAYQKGFRRLLKWDAIFLMILMILMFVPLSLVVG*
Ga0068488_13078411	3300006331	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRLLKWGVIFLIILNTLMFVPLSLIVGLFCL*
Ga0068480_11070126	3300006335	Marine	MDQFEIIWILVIVIGVLNYGLNAYQKGFRRLLKWGVIFLIILNTLMFVPLSLIVGLFCM*
Ga0068482_11331198	3300006338	Marine	MDQFEIIWILVIVIGVLNYGLNAYQKGFRRLLKWGVIFLIILNTLMFVPLSLIVGLFCL*
Ga0068482_12233543	3300006338	Marine	VTVIGSLNYGLNAYQNGFRRQLKWDVIFLIILNTLMFVPLSLIVGL*
Ga0068482_15110582	3300006338	Marine	MDQFEIIWILVTVIGALNYDLNAYQKGFRRLLKWGVIFLIILNTLMFVPLSLIVGLFCL*
Ga0068482_16875132	3300006338	Marine	MDQFEIIWILVTVIGALNYGLTAYQKGFRRRLKWDVIFLIILNTLMFVPLSLIVGL*
Ga0068481_12514982	3300006339	Marine	MDQFEIIWILVIVIGALNYDLNAYQKGFRRLLKWGVIFLIILNTLMFVLLSLIVGLFCL*
Ga0068503_101981096	3300006340	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRQLKWDVIFLIILNTLMFVPLSLIVGL*
Ga0068503_102088272	3300006340	Marine	MDQFEIIWILVTVIGVLNYGLNAYQKGFRRLLKWGVIFLIILNTLMFVPLSLIVGLYCL*
Ga0068503_102137981	3300006340	Marine	MDQFEIIWILVTVIGALNYGLNVYQKGFRRRLKWDVIFLIILNTIMIVPLSLIWGFNSVR
Ga0068503_104462193	3300006340	Marine	MDQFEIIWILVTVIGALNYGLYAYQKGFRRLLKWDVIFLIILITLMFVPLSLIWGFNSVR
Ga0068503_111263261	3300006340	Marine	NCVTRMDQFEIIWILVTVIGALSYGLNAYQKGFRRLLKWDVIFLLNTLMFVPLSLIVGLEFAN*
Ga0068493_102560903	3300006341	Marine	MDQFEIIWILVTVIGALNYGLNVYQKGFRRRLKWDVIFLIILNTLMFVPLSLIVGLEFAN
Ga0068493_103112903	3300006341	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRLLKWGVIFLIILNTLMFVPLSLIVGLFCM*
Ga0068493_104491271	3300006341	Marine	MDQFEIIWILVTVIGALNYDLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGLEFAN
Ga0068493_106060021	3300006341	Marine	MDQIEIIWILVTVIGALNYGLNAYQKGFRRLLKRDVIFLIILNTLMFVPLSLIVDLFCL*
Ga0099696_10559042	3300006346	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRLLKWGVIFLIILNTLMFVPLSLIVGL*
Ga0099696_10786603	3300006346	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVDLFCL*
Ga0099697_11155871	3300006347	Marine	MDQIEIIWILVTGIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIWGFNSVR
Ga0099697_12899691	3300006347	Marine	MDQIEIIWILVTGNGALNYGLYAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGL*
Ga0101728_1039322	3300006654	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRLLKWDVIXLIILNTLMFVPLSLIVVL*
Ga0066376_101339754	3300006900	Marine	LGELEISENQFEIIRILVIVIGLCVLGFNSYQEGFRRLLKWDAIFLIILMILMFVPLSLVV*
Ga0105664_10680982	3300007756	Background Seawater	MDQFEIIWILVTVIGALNYGLNAYQKGFRRRLKWDVIFLIILITLMFVPLSLIVGLEFAN
Ga0105353_10876872	3300008249	Methane Seep Mesocosm	IWILVTGIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGLEFAN*
Ga0105173_10928432	3300009622	Marine Oceanic	MDQFEIIWIPVTVIGALNYGLNAYQKGFRRLLKWDVIFLIILDTLMFVPLSLIVGL*
Ga0211679_10470032	3300020263	Marine	MDQIEIIWILVTGIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGLEFAN
Ga0211566_10046825	3300020272	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGL
Ga0211657_10037461	3300020298	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRLLKWNVIFLIILNTLMFVPLSLIVEL
Ga0211709_101331362	3300020369	Marine	MDQFEIIWILVTVIGALNYGLNAYQKGFRRRLKWDVIFLIILNTLMFVPLSLIWGFNSVR
Ga0232635_11046031	3300021973	Hydrothermal Vent Fluids	MDQIEIIWILVTVIGALNYGLNAYQKGFRRLLKWDVIFLIVLNTLMFVPLSLIVGL
Ga0232646_10117733	3300021978	Hydrothermal Vent Fluids	MDQFEIIWILATVIGALNYGLNAYQKGFRRLLKWDVIYLIILNTLMFVPLSLIVVL
Ga0232646_11455552	3300021978	Hydrothermal Vent Fluids	TGIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGL
Ga0208064_1053332	3300025192	Deep Ocean	MDQFEIIWILVTVIGALNYGLNAYQKGFRRLLKWDVIFLIVLNTLMFVPLSLIVGL
Ga0208058_10472921	3300025210	Deep Ocean	MDQFEIIWILATVIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVVL
Ga0207920_10532772	3300025215	Deep Ocean	TRMDQFEIIWILVTVIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGL
Ga0208470_10422673	3300025219	Deep Ocean	DQFEIIWILATVIGALNYGLNAYQKGFRRLLKWDVIYLIILNTLMFVPLSLIVVL
Ga0208336_10073465	3300025221	Deep Ocean	VIGALNYGLNAYQKGFRRLLKWDVIYLIILNTLMFVPLSLIVVL
Ga0208336_10453352	3300025221	Deep Ocean	MDQFEIIWILATVIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVG
Ga0208571_10211331	3300025232	Deep Ocean	FEIIWILVTVIGALNYGFNAYQKGFSRLLKWDVIFLIILDTLMFVPLSLIVGL
Ga0208830_10217201	3300025238	Deep Ocean	IGIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGL
Ga0208203_10487771	3300025240	Deep Ocean	VTVIGALNYGLNAYQKGFRRLLKWDVIFLIVLNTLMFVPLSLIVGL
Ga0208335_10009594	3300025243	Deep Ocean	MDQFEIIWILVTVIGALNYGFNAYQKGFRRLLKWDVISLIILDTLMFVPLSLIVGL
Ga0208335_10038671	3300025243	Deep Ocean	TLNYGLNAYQKGFRRLLKWDVIFLIVLNTLMFVPLSLIVGL
Ga0208570_10035103	3300025249	Deep Ocean	MDQFEIIWILVTVIGALNYGFNAYQKGFSRLLKWDVIFLIILDTLMFVPLSLIVGL
Ga0208471_10012899	3300025255	Deep Ocean	MDQFEIIWIPVTVIGALNYGLNAYQKGFRRLLKWDVIFLIILDTLMFVPLSLIVGL
Ga0208568_10274191	3300025269	Deep Ocean	ILATVIGALNYGLNAYQKGFRKLLKWDVIFLIILNTLMFVPLSLIVVL
Ga0208391_10152255	3300026108	Marine	NNCVTRMDQFEIIWIVTTVIGALNYGLNAYQKGFRRLLKWDVIYLIILNTLMFVPLSLIVVL
Ga0208391_11121322	3300026108	Marine	MDQFEIIWILVTVIGALNYGFNAYQKGFRRLLKWDVIFLIILDTLMFVPLSLIVGL
Ga0208521_10424881	3300026204	Marine	NLKNNCVTRMDQFEIIWILVTVIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGL
Ga0208131_10790372	3300026213	Marine	MDQIEIIWILVTGNGALNYGLYAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGLEFAN
Ga0208879_10183482	3300026253	Marine	MDQFEIIWILATVIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGL
Ga0207990_10101301	3300026262	Marine	QFEIIWILVTVIGALNYGLNAYQKGFRRLLKWNVIFLIILNTLMFVPLSLIVEL
Ga0209432_10046091	3300027630	Marine	MDQFEIIWILVTVIGALNYDLNAYQKGFRRLLKWGVIFLIILNTLMFVPLSLIVALF
Ga0209432_11304431	3300027630	Marine	VTVIGALNYGLNAYQKGFRRLLKWGVIFLIILNTLMFVPLSLIVGLYCL
Ga0209554_10416695	3300027685	Marine	EKITLGELEISENQFEIIRILVIVIGLCVLGFNSYQEGFRRLLKWDAIFLIILMILMFVPLSLVVE
Ga0257113_10325711	3300028488	Marine	MDQFEIIWILVTVIGALNYGLYAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGL
Ga0257113_10509533	3300028488	Marine	MDQIEIIWILVTGNGALNYGLYAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGL
Ga0315334_107659213	3300032360	Seawater	MDQFEIIWILVTVIGALNYGLNAYQNGFRRQLKWDVIFLIILNTLMFVPLSLIVGL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085813

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences