3300003537: Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS903_Marker113_DNA

Overview

Basic Information

• IMG/M Taxon OID: 3300003537
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0111355 | Gp0107627 | Ga0060338
• Sample Name: Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS903_Marker113_DNA
• Sequencing Status: Permanent Draft
• Published?: Y
• Use Policy: Open

Dataset Contents

• Total Genome Size: 193269043
• Sequencing Scaffolds: 42
• Novel Protein Genes: 48
• Associated Families: 48

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Predicted Viral	2
Not Available	27
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	3
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Candidatus Electrothrix → Candidatus Electrothrix marina	1
All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED264	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter radioresistens	1
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Diffuse Hydrothermal Flow Volcanic Vent Microbial Communities From Axial Seamount, Northeast Pacific Ocean
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent → Diffuse Hydrothermal Flow Volcanic Vent Microbial Communities From Axial Seamount, Northeast Pacific Ocean

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): marine hydrothermal vent biome → marine hydrothermal vent → hydrothermal fluid
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Subsurface (non-saline)

Location Information

• Location: Axial seamount, northeast pacific ocean
• Coordinates
  • Lat. (^o): 45.92274
  • Long. (^o): -129.988104
  • Alt. (m): N/A
  • Depth (m): 1522

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000107	Metagenome / Metatranscriptome	2222	Y
F000352	Metagenome / Metatranscriptome	1247	Y
F000711	Metagenome / Metatranscriptome	925	Y
F002348	Metagenome / Metatranscriptome	568	Y
F003285	Metagenome / Metatranscriptome	496	Y
F004643	Metagenome / Metatranscriptome	429	Y
F004843	Metagenome	421	Y
F005336	Metagenome / Metatranscriptome	404	Y
F005685	Metagenome / Metatranscriptome	393	Y
F006092	Metagenome / Metatranscriptome	382	Y
F006126	Metagenome / Metatranscriptome	381	Y
F008085	Metagenome / Metatranscriptome	339	Y
F008625	Metagenome / Metatranscriptome	330	Y
F008692	Metagenome / Metatranscriptome	329	Y
F009367	Metagenome / Metatranscriptome	319	Y
F012178	Metagenome	283	Y
F013191	Metagenome / Metatranscriptome	273	N
F013570	Metagenome / Metatranscriptome	270	N
F013899	Metagenome / Metatranscriptome	267	Y
F015350	Metagenome	255	Y
F015654	Metagenome / Metatranscriptome	253	N
F016675	Metagenome / Metatranscriptome	245	Y
F016878	Metagenome	244	Y
F017326	Metagenome / Metatranscriptome	241	N
F017398	Metagenome	241	Y
F017721	Metagenome / Metatranscriptome	239	Y
F019228	Metagenome / Metatranscriptome	231	Y
F019388	Metagenome / Metatranscriptome	230	N
F019682	Metagenome / Metatranscriptome	228	Y
F022907	Metagenome / Metatranscriptome	212	Y
F032036	Metagenome / Metatranscriptome	181	N
F036294	Metagenome / Metatranscriptome	170	Y
F039638	Metagenome / Metatranscriptome	163	Y
F045150	Metagenome / Metatranscriptome	153	N
F051448	Metagenome / Metatranscriptome	144	N
F062843	Metagenome	130	Y
F063198	Metagenome / Metatranscriptome	130	N
F068126	Metagenome	125	Y
F072444	Metagenome	121	N
F080654	Metagenome / Metatranscriptome	115	N
F081452	Metagenome / Metatranscriptome	114	N
F085813	Metagenome	111	N
F089037	Metagenome / Metatranscriptome	109	Y
F090619	Metagenome / Metatranscriptome	108	Y
F095618	Metagenome / Metatranscriptome	105	Y
F101330	Metagenome / Metatranscriptome	102	N
F101351	Metagenome / Metatranscriptome	102	N
F101495	Metagenome / Metatranscriptome	102	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
FS903DNA_1002346	All Organisms → Viruses → Predicted Viral	2548
FS903DNA_1006567	Not Available	911
FS903DNA_1009404	Not Available	688
FS903DNA_1010130	Not Available	2771
FS903DNA_1024416	Not Available	1118
FS903DNA_1031530	All Organisms → cellular organisms → Bacteria → Proteobacteria	736
FS903DNA_1031667	All Organisms → Viruses → Predicted Viral	1625
FS903DNA_1039909	Not Available	550
FS903DNA_1057586	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	884
FS903DNA_1061136	Not Available	623
FS903DNA_1065833	All Organisms → cellular organisms → Bacteria	689
FS903DNA_1074026	Not Available	952
FS903DNA_1079699	Not Available	550
FS903DNA_1081088	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	655
FS903DNA_1081478	Not Available	542
FS903DNA_1084195	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Candidatus Electrothrix → Candidatus Electrothrix marina	542
FS903DNA_1086852	Not Available	513
FS903DNA_1087595	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	547
FS903DNA_1101343	Not Available	552
FS903DNA_1121022	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED264	687
FS903DNA_1128847	Not Available	540
FS903DNA_1138833	Not Available	590
FS903DNA_1141539	Not Available	630
FS903DNA_1145570	Not Available	646
FS903DNA_1146364	Not Available	526
FS903DNA_1161680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter radioresistens	595
FS903DNA_1163273	Not Available	666
FS903DNA_1181216	Not Available	655
FS903DNA_1184984	Not Available	530
FS903DNA_1193180	Not Available	688
FS903DNA_1197211	All Organisms → cellular organisms → Bacteria	575
FS903DNA_1198782	Not Available	567
FS903DNA_1208692	All Organisms → cellular organisms → Eukaryota	657
FS903DNA_1232632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	543
FS903DNA_1254598	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	518
FS903DNA_1270562	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	548
FS903DNA_1276833	Not Available	525
FS903DNA_1285681	Not Available	595
FS903DNA_1293231	Not Available	587
FS903DNA_1318019	Not Available	522
FS903DNA_1361592	Not Available	545
FS903DNA_1370736	Not Available	514

Sequences

Scaffold ID	Protein ID	Family	Sequence
FS903DNA_1002346	FS903DNA_10023462	F000711	METINEPNHPTDYRLVKLMDGSILMGTISVDEQHMRIENPLELTTLPRMTEFGLKEDTTLSRWIPFTSDKEFVITKDKVVVISLATVELAHFYEVVLNKMQNDSQHARPPLTPDDIDRILSIAEEMDSEFMRDDEPHDMIGGYTIESKKLH*
FS903DNA_1006567	FS903DNA_10065673	F005685	MKKFNEYSSFEDKILGTLKRGPCDLMTLSHKLKEDIMPVSSMLEHLKVYDKVEMFKEKWQIKRTKKN*
FS903DNA_1009404	FS903DNA_10094041	F017398	NKHKKEIQGAVHGYYVRRGTIAVKHSSGRMVGGDSELSEWNAWDEQVVDKIKIEKVHTYNTARRAGDWVKTDIIPNLGKIPHKHWKSATELSTYISQVADAEVRVLRRSKG*
FS903DNA_1009404	FS903DNA_10094042	F016878	MKTFKQYLKEGPPAWTESLSKMLFDLPRTGFKDIKIPLSSAIFKRIWPESVRSRVFHLTDLDGVGKLKKMQGKKKSISAFYNMDDYIIQSGIKTEGGYVVELEGDVLAAAPDDISSQP
FS903DNA_1010130	FS903DNA_10101303	F085813	MDQIEIIWILVTGIGALNYGLNAYQKGFRRRLKWDVIFLIILNTLMFVPLSLIVGL*
FS903DNA_1024416	FS903DNA_10244161	F095618	LLRTFSHRATNFRPNILVTITPVISMTNSTKIIPEPGIVVSKLNRASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK*
FS903DNA_1031530	FS903DNA_10315302	F006092	MVFKKLNHRPRHDFFWDAFDLKKHVFIDTRKQTRQKMEGISASQF*
FS903DNA_1031667	FS903DNA_10316672	F039638	MIIRQTLDLLASEDWFIEDKDIQIAKGLYELPTTFKELKTSIKRNKLVE*
FS903DNA_1039909	FS903DNA_10399092	F006126	MSDLSFKKFTRQLNERRYIGPQGTVEYKKLSPKMRAAINDVYSMINRASGSVVSKIEGIIRAVSKKHGVSTYDIDDYFDNELIK*
FS903DNA_1057586	FS903DNA_10575862	F013899	MFPDTSEIEEGEKGQFELFQSGVSFMKAGHGKFFDLEDVKKKLTKSGQDLFTNR*
FS903DNA_1057586	FS903DNA_10575863	F062843	MNIWIEYWEKSKEPSKNTHAQIREQAHWEPPDPKTVHKRFCQGREDANRYANSLQEQGYHVIIKQDNGGY*
FS903DNA_1061136	FS903DNA_10611362	F019388	MRTPNEQNPYLVETKNGQILKFSRIDADNEAVSKQLDGDDVEVYHDGKLQYKLHGIEQGKLF*
FS903DNA_1065833	FS903DNA_10658332	F101330	MWLQNNYTVSFCGFIGVCIGYFTGHQEICIMIGVGIGILIRIVQNKSK*
FS903DNA_1074026	FS903DNA_10740261	F004843	MIKWILIIAIALSLSGCADTADAEDSAATTPAEQTQNRTADASGTTWIAIVMTWNPVKRVIDKEFSSEVNCWNYYDNGAGESKMLNNYGTQVLDHQGNKPDAEYMKKHRPQHRVYPTRMYKNFGGWMMWLTCDIKGRYEDL*
FS903DNA_1074026	FS903DNA_10740262	F015350	MAILVGWQYDDAFQKNLHEVEIRIKKFESVDLFNILEQISLAHIESVESVDILNKKQMEVQALEKEIKEKFDIQEREVRAQVKTIETKLQKLRSELHDGLTKIERNVSTIDSVVDEKFKTLWMMINNK*
FS903DNA_1079699	FS903DNA_10796991	F017721	MSFREIWNGPSFLNRSEVAQRMAARDNAGKRKTGKTKKKNYEEHFDKNWDKDLWD*
FS903DNA_1081088	FS903DNA_10810881	F045150	MGIKFISGFRGLDHAKQHLRRSVHLGSALTSGYTVLNPAEAF
FS903DNA_1081161	FS903DNA_10811612	F000107	MSIKNVTVVDTTSKYIVKSTGIGSDNQKMIEPSKGKYGAVKLEGGDTDSKVSLIECYYLIEGTGTLKISADAEHPNTLSLTGKGKYGLRPGQLKFGNDKQILLTTDSNVESYLLVTEFRRNNQWLML*
FS903DNA_1081478	FS903DNA_10814782	F015654	MKRFFKEVYIKGHGKEDKNTFDTFKDTKFYKVNADKVEELKDCDNVEYITFDEIKV*
FS903DNA_1084195	FS903DNA_10841951	F036294	MDRGSSDEAIVGVKSVANEDSVTYPRVKLSESDKEVGAEGWNM*
FS903DNA_1086852	FS903DNA_10868521	F008085	MAGSIIVRYARKTYKQQRAEERNSAVFKNLTHSVDIIPESMSIMTFSTWKEANEFAQYISEKGQHVLEIKDDYTERKKK*
FS903DNA_1087595	FS903DNA_10875951	F017326	MIMNDYEKVKIEINESVTSDNFKEHLRKNYHNSYDEYESDTRHIDLDVYYEKNSIPLSEIVPKGMTIKEYFGREERLKRGESISYMKFD*
FS903DNA_1101343	FS903DNA_11013432	F063198	PTTIVEITKLYIVRMRLEENSLISEDRLILNAPSKIRINRVKVVNTGATEARSSGDVYPNPLGPIRNPSIIRNNTSGILVRRNNASDKKPKIAIKLNASNAVLTFIALR*
FS903DNA_1121022	FS903DNA_11210222	F013570	MELEKIKKKREELMTNYNSLVDKRIELEKQLEVTNTDILTMRGAILLCNEFIEEEEKPEPKPLFPEKEVVVNDLDKEKDGRQKNK*
FS903DNA_1128847	FS903DNA_11288471	F013191	HLVCQDIDAQLELITNDLTKKYKCYFRGFDLIPSMHYDTLKQTTDKRLKIGENQPKTDNFIQFAHEGIMYFIWIDSSDPTENIAWWSDTTFEEWVTDTVALRLAAQQNPSETFFYFVGFDYYHDQTKDGIFLVSSITEFHDENQDSWIGQHKHIEEEFPNSKFIFVGKDIDYGDFENLL
FS903DNA_1138833	FS903DNA_11388331	F080654	ISEESEPVGKTNLEERQDLWNKIQKFNPEASAMDYYDNDEWDLEKMRSDLKVLLEKERFGR*
FS903DNA_1141539	FS903DNA_11415391	F022907	MDEDNTLDIRQSVGDVGGDFTKSITIESGGDERVGDIEAVIDLTYNIFQYIPELIFVSIYGLAMYAGV
FS903DNA_1145570	FS903DNA_11455701	F081452	ADAHLLSRLFMIPVLSLAQVAREDGVISDASRIFKDPTNFNIIISDKVA*
FS903DNA_1146364	FS903DNA_11463642	F009367	MKEVHSQLVDVVLLTQENGSTMFCRGGEDAVRRFWNLWPIVKAEFTGEKQLLQSIDADEIDQPYIPTTHM*
FS903DNA_1161680	FS903DNA_11616801	F101351	YLVNNMNKPAFSETIPNELKELGYVPPIIKSYDNNGINVWLDNRRKIYDAPFWQFTMDGIQWMVLDERHGSASQFYSHYKLAKGHVICTGLGFGTREQWLASKPEVTKITVLEKFKEVIDYHKDIGTKWSDKIEIINCDANDYKGSCDFLSIDHYEYDDVLRILDSIKTVCNNITCESA*
FS903DNA_1163273	FS903DNA_11632731	F005336	MPDKTGRRWVELHSIDPKEKMHPEFEKMLIDLAIKHDPKNKEYLKTSPEIGIGVWWKLQSDLQTNFAKDKAGKKLSLIIADYIDGVNAILKKHKKDIQGAVHGYYVRRGAVKVKHPSSGRMVGGDSKIKEWNAYDEQVVDKIKIEKVHTFYSPSYADRPKKEIVPQLGKIPHKHWNNARELSTYISQVADAEVRTFAGWARKK*
FS903DNA_1181216	FS903DNA_11812161	F002348	MKPNEKWVKYGGWLLSLLSILIGASFLWPHFHVALLGFALIYLGVRIFNFSTFEEYKEKRMKLLHKLMD
FS903DNA_1181216	FS903DNA_11812162	F008692	MAKRNGNKQKRQTKDEYYMPTSEEEFQADLAADDARYLQYCREQEEMYNDPVMNWSGLR*
FS903DNA_1184984	FS903DNA_11849842	F012178	MWVLLWVQLTTSAANGGEFEHYHVGSYTKQEVCELAKDEAQVLVTNEKSKVVCIKIEL*
FS903DNA_1193180	FS903DNA_11931801	F090619	MSSEKYIQIRAKVPIDSDGTVFKEFNANEKFRRQDISIMLKLLPLIQKYELDFLPKIIDYNENGYRYKYVDGKTLKEEIDNGILKLTQKMIYEMKIAMDDIWKRFYQISIENKDDELFGGNGFLYHGDPWLGNAIWNDDNKELKFIDIDSLSIADFVPMTQLNNMFFQHLETLLVTQDKNKLTLGTWL*
FS903DNA_1197211	FS903DNA_11972111	F003285	MPEQESIHQLQTEIQTLKIKDEFRTKELDALMNKLSDTSSKLNALSENIGRLLAGQELHKTSDNEVRDELKILHTRIGDLHDKCTEMIDKTETRVSSDISLLYKKVDSLEKWRWITIGIATAIAWLLTNIIPKFLNN*
FS903DNA_1198782	FS903DNA_11987821	F068126	MGMAISLILTSCAKHNKDDKTHHDLGSGDKSNLPVTLASLIEHAEYCKAIYDSGGDQKD
FS903DNA_1208692	FS903DNA_12086922	F089037	MKSKIISNLISNNPWTYQEFWDALPDVVYSKDIKTKPIWRDDPNWPKYIKDKNK*
FS903DNA_1232632	FS903DNA_12326321	F019682	DMLIVLESVGSVFDTSSMCIYPQKVDGSYDKEFSISIEEDEVAKDWWDSLSVEDYDTVTCCI*
FS903DNA_1254598	FS903DNA_12545981	F019228	MKKKVGKRKRKGWRKRSPRCTLCTAIRWMGNIKGRHPMRELKQLDKEKHDAD
FS903DNA_1270562	FS903DNA_12705623	F000352	MKTIKLTEGDALFVNHVLHMYAQQTTRLDSEDKAEIKKVAAKFK*
FS903DNA_1276833	FS903DNA_12768331	F004643	LNDLAKYYDKDFWEENRWVSCFECDIIFEDLEKLYEHQDLHLEEEKK*
FS903DNA_1285681	FS903DNA_12856811	F008625	MEEIAGNRLVWRHIQRENQLMILNPLGYDPIKDIDEINSRNRRKTDDPYIKATMKNADHKRWKDNPAERR*
FS903DNA_1285681	FS903DNA_12856812	F032036	MKWIILVYLTIAAGTTEGDISYTRLEHPAKDFQECIDIEQQINDFLHRGRESKTKYVRSLYWEYKNTLGDIKAECVFANSPLPYSKKFTKQKK*
FS903DNA_1293231	FS903DNA_12932313	F072444	MMPERENNAFWEIAELIEREMSILRKMRPVGPKEKALLKKMMDDKKKEYEKRTNSPKITRFGSSLT*
FS903DNA_1318019	FS903DNA_13180191	F016675	MRQFEVDYETTVPPWHTGHEKYEADDLDTARKMFRSKHEAARIYKVTEVLYDQRYVAA*
FS903DNA_1361592	FS903DNA_13615921	F101495	MTLPVSIDTMKSTINRRGGLARGNRYAVYISHPSKSINNLLQFNPATLLSNLISGDGVHIGDFISDPRDMFLLCQTATMPGKRILTT
FS903DNA_1370736	FS903DNA_13707361	F051448	DYEDKNVKIAHYYNKKDEHGYPMHNGLTYVYTFDAYEDKWLVHGVLEFEFESSAWWLYSDFYGTHSFNSYESIAKWWAENRFLPPREFVSKKDKERMEMDSLINSHICEMSEGM*