Metagenome / Metatranscriptome Family F065251

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065251
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	49 residues
Representative Sequence	MYLRHFSKGKKKYYYIAKAVRKGARVIQKSILYIGTADTLYEKLINLKKK
Number of Associated Samples	80
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	5.47 %
% of genes near scaffold ends (potentially truncated)	16.41 %
% of genes from short scaffolds (< 2000 bps)	82.81 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (75.000 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater (33.594 % of family members)
Environment Ontology (ENVO)	Unclassified (35.156 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (63.281 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.67% β-sheet: 38.46% Coil/Unstructured: 44.87%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF01797	Y1_Tnp	1.56
PF01420	Methylase_S	1.56
PF05175	MTS	0.78
PF01676	Metalloenzyme	0.78
PF09853	DUF2080	0.78
PF01978	TrmB	0.78
PF00076	RRM_1	0.78
PF14023	DUF4239	0.78
PF00437	T2SSE	0.78
PF01191	RNA_pol_Rpb5_C	0.78
PF01916	DS	0.78
PF00009	GTP_EFTU	0.78
PF01728	FtsJ	0.78
PF01935	DUF87	0.78
PF13737	DDE_Tnp_1_5	0.78
PF13495	Phage_int_SAM_4	0.78
PF00561	Abhydrolase_1	0.78
PF00589	Phage_integrase	0.78
PF07584	BatA	0.78
PF13714	PEP_mutase	0.78
PF13518	HTH_28	0.78
PF01435	Peptidase_M48	0.78
PF14319	Zn_Tnp_IS91	0.78
PF00535	Glycos_transf_2	0.78
PF01849	NAC	0.78
PF13412	HTH_24	0.78
PF00583	Acetyltransf_1	0.78
PF13489	Methyltransf_23	0.78
PF01943	Polysacc_synt	0.78
PF05016	ParE_toxin	0.78
PF00293	NUDIX	0.78
PF01866	Diphthamide_syn	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0732	Restriction endonuclease S subunit	Defense mechanisms [V]	1.56
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	1.56
COG0293	23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ	Translation, ribosomal structure and biogenesis [J]	0.78
COG1189	Predicted rRNA methylase YqxC, contains S4 and FtsJ domains	Translation, ribosomal structure and biogenesis [J]	0.78
COG1308	Transcription factor homologous to NACalpha-BTF3	Transcription [K]	0.78
COG1736	Diphthamide synthase subunit DPH2	Translation, ribosomal structure and biogenesis [J]	0.78
COG1899	Deoxyhypusine synthase	Translation, ribosomal structure and biogenesis [J]	0.78
COG2012	DNA-directed RNA polymerase, subunit H, RpoH/RPB5	Transcription [K]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.34 %
Unclassified	root	N/A	22.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.34 %
Unclassified	root	N/A	22.66 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	75.00 %
Unclassified	root	N/A	22.66 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.34 %

Name	Rank	Taxonomy	Distribution
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	23.44 %
Unclassified	root	N/A	22.66 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	2.34 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.66 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	6.25 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	2.34 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	1.56 %
Nanoarchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota	1.56 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.66 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	6.25 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	2.34 %
unclassified Nanoarchaeota	no rank	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota	1.56 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.56 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.66 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	6.25 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	2.34 %
Nanoarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon	1.56 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.56 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.66 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	6.25 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	2.34 %
Nanoarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon	1.56 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.56 %
Candidatus Nomurabacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Nomurabacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.66 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	6.25 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	2.34 %
Nanoarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon	1.56 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.56 %
Candidatus Nomurabacteria bacterium GW2011_GWA1_37_20	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Nomurabacteria → Candidatus Nomurabacteria bacterium GW2011_GWA1_37_20	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2016842005\|YNP17_FYNF10409_b1	All Organisms → cellular organisms → Archaea → DPANN group	814	Open in IMG/M
3300000230\|TB_GS10_10DRAFT_10070827	All Organisms → cellular organisms → Archaea → Euryarchaeota	1469	Open in IMG/M
3300000574\|JGI1357J11328_10053907	All Organisms → cellular organisms → Archaea → Euryarchaeota	1541	Open in IMG/M
3300001380\|JGI1356J14229_10196294	All Organisms → cellular organisms → Archaea → DPANN group	581	Open in IMG/M
3300001959\|GOS2247_1056421	All Organisms → cellular organisms → Archaea	926	Open in IMG/M
3300002105\|C687J26635_10032024	All Organisms → cellular organisms → Archaea	2937	Open in IMG/M
3300002105\|C687J26635_10037082	All Organisms → cellular organisms → Archaea	2667	Open in IMG/M
3300002105\|C687J26635_10100160	Not Available	1345	Open in IMG/M
3300002105\|C687J26635_10103293	All Organisms → cellular organisms → Archaea	1315	Open in IMG/M
3300002105\|C687J26635_10133318	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1096	Open in IMG/M
3300002105\|C687J26635_10165545	All Organisms → cellular organisms → Archaea	939	Open in IMG/M
3300002105\|C687J26635_10320392	All Organisms → cellular organisms → Archaea → DPANN group	592	Open in IMG/M
3300002502\|C687J35174_10184097	All Organisms → cellular organisms → Archaea	1718	Open in IMG/M
3300002502\|C687J35174_10190813	All Organisms → cellular organisms → Archaea	1672	Open in IMG/M
3300002502\|C687J35174_10278855	Not Available	1249	Open in IMG/M
3300002502\|C687J35174_10289518	All Organisms → cellular organisms → Archaea	1214	Open in IMG/M
3300002502\|C687J35174_10292921	Not Available	1203	Open in IMG/M
3300002502\|C687J35174_10303214	Not Available	1172	Open in IMG/M
3300002502\|C687J35174_10610056	Not Available	690	Open in IMG/M
3300002502\|C687J35174_10783267	All Organisms → cellular organisms → Archaea → DPANN group	573	Open in IMG/M
3300002529\|C687J35504_10093091	All Organisms → cellular organisms → Archaea	1350	Open in IMG/M
3300002966\|JGI24721J44947_10041248	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	4174	Open in IMG/M
3300003542\|FS900DNA_10368227	All Organisms → cellular organisms → Archaea → DPANN group	553	Open in IMG/M
3300003830\|Ga0051980_10018255	All Organisms → cellular organisms → Bacteria	5056	Open in IMG/M
3300003830\|Ga0051980_10129737	Not Available	1412	Open in IMG/M
3300003830\|Ga0051980_10217342	All Organisms → cellular organisms → Archaea	965	Open in IMG/M
3300004006\|Ga0055453_10295742	Not Available	521	Open in IMG/M
3300004185\|Ga0066642_10068339	All Organisms → cellular organisms → Archaea	1166	Open in IMG/M
3300004208\|Ga0066640_10128748	All Organisms → cellular organisms → Archaea → Euryarchaeota	1408	Open in IMG/M
3300004209\|Ga0066649_10141044	All Organisms → cellular organisms → Archaea	1309	Open in IMG/M
3300004210\|Ga0066639_10205900	All Organisms → cellular organisms → Archaea	1258	Open in IMG/M
3300004210\|Ga0066639_10326456	All Organisms → cellular organisms → Archaea	923	Open in IMG/M
3300004210\|Ga0066639_10339217	Not Available	899	Open in IMG/M
3300004210\|Ga0066639_10351263	All Organisms → cellular organisms → Archaea	877	Open in IMG/M
3300004210\|Ga0066639_10365011	Not Available	854	Open in IMG/M
3300005235\|Ga0066637_10046144	All Organisms → cellular organisms → Archaea	2429	Open in IMG/M
3300005235\|Ga0066637_10159663	All Organisms → cellular organisms → Archaea	998	Open in IMG/M
3300005235\|Ga0066637_10169789	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	953	Open in IMG/M
3300005573\|Ga0078972_1113123	All Organisms → cellular organisms → Archaea	1475	Open in IMG/M
3300005613\|Ga0074649_1028011	All Organisms → cellular organisms → Archaea	2916	Open in IMG/M
3300005645\|Ga0077109_1173079	All Organisms → cellular organisms → Archaea → DPANN group	534	Open in IMG/M
3300006224\|Ga0079037_101394602	Not Available	698	Open in IMG/M
3300006865\|Ga0073934_10806070	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Nomurabacteria → Candidatus Nomurabacteria bacterium GW2011_GWA1_37_20	535	Open in IMG/M
3300007964\|Ga0100400_1128573	All Organisms → cellular organisms → Archaea	992	Open in IMG/M
3300008002\|Ga0100390_10520291	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon	531	Open in IMG/M
3300008007\|Ga0100386_10162798	All Organisms → cellular organisms → Archaea	1231	Open in IMG/M
3300008095\|Ga0100392_1015844	All Organisms → cellular organisms → Bacteria	5978	Open in IMG/M
3300008255\|Ga0100403_1114068	All Organisms → cellular organisms → Archaea	1033	Open in IMG/M
3300009031\|Ga0103682_10035067	All Organisms → cellular organisms → Archaea	2916	Open in IMG/M
3300009031\|Ga0103682_10069666	Not Available	1920	Open in IMG/M
3300009053\|Ga0105095_10244252	Not Available	985	Open in IMG/M
3300009296\|Ga0103681_1192284	Not Available	834	Open in IMG/M
3300009503\|Ga0123519_10212154	All Organisms → cellular organisms → Archaea	1324	Open in IMG/M
3300009537\|Ga0129283_10054732	All Organisms → cellular organisms → Archaea	1600	Open in IMG/M
3300009538\|Ga0129287_10003652	All Organisms → cellular organisms → Archaea	8616	Open in IMG/M
3300009538\|Ga0129287_10045355	All Organisms → cellular organisms → Archaea	1873	Open in IMG/M
3300009538\|Ga0129287_10095259	All Organisms → cellular organisms → Archaea	1261	Open in IMG/M
3300009538\|Ga0129287_10509205	Not Available	541	Open in IMG/M
3300012964\|Ga0153916_12157779	All Organisms → cellular organisms → Archaea → DPANN group	626	Open in IMG/M
3300013092\|Ga0163199_1066862	Not Available	1577	Open in IMG/M
(restricted) 3300013125\|Ga0172369_10161631	All Organisms → cellular organisms → Archaea	1338	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10137387	All Organisms → cellular organisms → Archaea	1533	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10431761	Not Available	767	Open in IMG/M
(restricted) 3300013133\|Ga0172362_11078460	Not Available	527	Open in IMG/M
3300014574\|Ga0180011_101616	All Organisms → cellular organisms → Archaea	1514	Open in IMG/M
3300014656\|Ga0180007_10085847	Not Available	2135	Open in IMG/M
3300014656\|Ga0180007_10637248	Not Available	635	Open in IMG/M
3300014911\|Ga0180301_10084211	All Organisms → cellular organisms → Archaea	2006	Open in IMG/M
3300015370\|Ga0180009_10109471	All Organisms → cellular organisms → Archaea	1423	Open in IMG/M
3300015370\|Ga0180009_10111914	All Organisms → cellular organisms → Archaea	1399	Open in IMG/M
3300020074\|Ga0194113_10159938	All Organisms → cellular organisms → Archaea	1857	Open in IMG/M
3300020171\|Ga0180732_1110102	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	848	Open in IMG/M
3300020198\|Ga0194120_10511853	All Organisms → cellular organisms → Archaea → DPANN group	538	Open in IMG/M
3300020364\|Ga0211538_1047172	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon	1356	Open in IMG/M
(restricted) 3300023177\|Ga0233423_10008365	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	4694	Open in IMG/M
(restricted) 3300023177\|Ga0233423_10026404	All Organisms → cellular organisms → Archaea	2539	Open in IMG/M
(restricted) 3300023177\|Ga0233423_10078667	All Organisms → cellular organisms → Archaea	1411	Open in IMG/M
(restricted) 3300023177\|Ga0233423_10118489	Not Available	1130	Open in IMG/M
(restricted) 3300023177\|Ga0233423_10230746	All Organisms → cellular organisms → Archaea → DPANN group	790	Open in IMG/M
3300024995\|Ga0210018_1006048	Not Available	5405	Open in IMG/M
3300024995\|Ga0210018_1037243	All Organisms → cellular organisms → Archaea	1451	Open in IMG/M
3300025012\|Ga0209727_1050353	All Organisms → cellular organisms → Archaea	1288	Open in IMG/M
3300025015\|Ga0209210_1036037	All Organisms → cellular organisms → Archaea	1771	Open in IMG/M
3300025018\|Ga0210043_1093669	All Organisms → cellular organisms → Archaea	893	Open in IMG/M
3300025021\|Ga0210017_1016976	Not Available	4853	Open in IMG/M
3300025081\|Ga0208953_1035705	All Organisms → cellular organisms → Archaea → DPANN group	1241	Open in IMG/M
3300025095\|Ga0208977_1035293	All Organisms → cellular organisms → Archaea → DPANN group	1228	Open in IMG/M
3300025150\|Ga0210057_1123743	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1558	Open in IMG/M
3300025150\|Ga0210057_1150690	All Organisms → cellular organisms → Archaea	1334	Open in IMG/M
3300025150\|Ga0210057_1240157	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	926	Open in IMG/M
3300025308\|Ga0209211_10071687	All Organisms → cellular organisms → Archaea	2906	Open in IMG/M
3300025308\|Ga0209211_10204873	All Organisms → cellular organisms → Archaea	1299	Open in IMG/M
3300025311\|Ga0209343_10186069	All Organisms → cellular organisms → Archaea → DPANN group	1573	Open in IMG/M
3300025311\|Ga0209343_10817419	All Organisms → cellular organisms → Archaea → DPANN group	512	Open in IMG/M
3300025317\|Ga0209541_10023509	All Organisms → cellular organisms → Archaea	8507	Open in IMG/M
3300025317\|Ga0209541_10211876	All Organisms → cellular organisms → Archaea	1673	Open in IMG/M
3300025317\|Ga0209541_10213506	All Organisms → cellular organisms → Archaea	1664	Open in IMG/M
3300025317\|Ga0209541_10403551	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1009	Open in IMG/M
3300025323\|Ga0209542_10003260	All Organisms → cellular organisms → Archaea	34939	Open in IMG/M
3300025323\|Ga0209542_10273830	All Organisms → cellular organisms → Archaea	1462	Open in IMG/M
3300025323\|Ga0209542_10287957	Not Available	1406	Open in IMG/M
3300025323\|Ga0209542_10312529	All Organisms → cellular organisms → Archaea	1319	Open in IMG/M
3300025323\|Ga0209542_10341575	Not Available	1230	Open in IMG/M
3300025323\|Ga0209542_10666158	All Organisms → cellular organisms → Archaea → DPANN group	724	Open in IMG/M
3300025837\|Ga0210016_1151577	Not Available	964	Open in IMG/M
3300025850\|Ga0210050_1048960	All Organisms → cellular organisms → Archaea → DPANN group	2097	Open in IMG/M
3300027811\|Ga0256868_10106647	All Organisms → cellular organisms → Archaea	1243	Open in IMG/M
3300027815\|Ga0209726_10049913	All Organisms → cellular organisms → Archaea	2924	Open in IMG/M
3300027863\|Ga0207433_10237569	All Organisms → cellular organisms → Archaea	1328	Open in IMG/M
3300028028\|Ga0265292_1040406	All Organisms → cellular organisms → Archaea	1482	Open in IMG/M
3300028028\|Ga0265292_1047637	All Organisms → cellular organisms → Archaea	1319	Open in IMG/M
3300028032\|Ga0265296_1068961	All Organisms → cellular organisms → Archaea	1468	Open in IMG/M
3300028032\|Ga0265296_1082311	All Organisms → cellular organisms → Archaea	1290	Open in IMG/M
3300028169\|Ga0268279_1159283	All Organisms → cellular organisms → Archaea → DPANN group	581	Open in IMG/M
3300028299\|Ga0268276_1070690	Not Available	1237	Open in IMG/M
(restricted) 3300028581\|Ga0247840_10165390	All Organisms → cellular organisms → Archaea	1302	Open in IMG/M
3300031576\|Ga0247727_10326422	All Organisms → cellular organisms → Archaea	1285	Open in IMG/M
3300031746\|Ga0315293_11045538	Not Available	578	Open in IMG/M
3300031772\|Ga0315288_10372490	Not Available	1459	Open in IMG/M
3300031873\|Ga0315297_11598334	All Organisms → cellular organisms → Archaea → DPANN group	524	Open in IMG/M
3300031949\|Ga0214473_10425591	All Organisms → cellular organisms → Archaea	1495	Open in IMG/M
3300031997\|Ga0315278_10445348	All Organisms → cellular organisms → Archaea	1335	Open in IMG/M
3300032053\|Ga0315284_10205515	All Organisms → cellular organisms → Archaea	2544	Open in IMG/M
3300032118\|Ga0315277_10454193	All Organisms → cellular organisms → Archaea	1298	Open in IMG/M
3300032342\|Ga0315286_10740286	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1000	Open in IMG/M
3300032342\|Ga0315286_11236545	All Organisms → cellular organisms → Archaea → DPANN group	729	Open in IMG/M
3300032516\|Ga0315273_13218525	Not Available	505	Open in IMG/M
3300033991\|Ga0334965_0008815	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	5763	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.44%
Engineered	Engineered	1.56%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	84.38%
Terrestrial	Environmental → Terrestrial	14.06%
Solid Waste	Engineered → Solid Waste	1.56%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	68.75%
Soil	Environmental → Terrestrial → Soil	13.28%
Thermal Springs	Environmental → Aquatic → Thermal Springs	4.69%
Marine	Environmental → Aquatic → Marine	3.91%
Unclassified	Environmental → Aquatic → Unclassified	3.91%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	3.12%
Landfill	Engineered → Solid Waste → Landfill	1.56%
Cave	Environmental → Terrestrial → Cave	0.78%

Habitat	Taxonomy	Distribution
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	46.09%
Lake	Environmental → Aquatic → Freshwater → Lake	17.97%
Loam	Environmental → Terrestrial → Soil → Loam	11.72%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.91%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	3.91%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	3.12%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	2.34%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.56%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.56%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	1.56%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.78%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.78%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.78%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	42.97%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	11.72%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	10.16%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	7.81%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	3.91%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	3.91%
Chlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated	2.34%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	2.34%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	2.34%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.56%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.78%
Cave Water	Environmental → Aquatic → Freshwater → Groundwater → Cave Water	0.78%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.78%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.78%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.78%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.78%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.78%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	33.59%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	11.72%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	10.16%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.25%
Aquifer	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Aquifer	4.69%
Hot Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring	3.91%
Beach Aquifer Porewater	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater	3.91%
Groundwater	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated → Groundwater	2.34%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.34%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	2.34%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.56%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.56%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	1.56%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	1.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.78%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.78%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.78%
Contaminated Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Contaminated Groundwater	0.78%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Cave Water → Groundwater	0.78%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.78%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.78%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.78%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	0.78%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.78%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.78%
Brackish Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Brackish Water	0.78%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.78%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2016842005	Hot spring microbial communities from Yellowstone National Park, Wyoming, USA - YNP17 Obsidian Pool Prime	Environmental	Open in IMG/M
3300000230	Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- GS10_10	Environmental	Open in IMG/M
3300000574	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m	Environmental	Open in IMG/M
3300001380	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m	Environmental	Open in IMG/M
3300001959	Mangrove swamp microbial communities from Isabella Island, Equador - GS032	Environmental	Open in IMG/M
3300002105	Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.1	Environmental	Open in IMG/M
3300002502	Soil microbial communities from Rifle, Colorado - Rifle CSP2_plank highO2_0.1	Environmental	Open in IMG/M
3300002529	Soil microbial communities from Rifle, Colorado - Rifle CSP2_plank highO2_0.2	Environmental	Open in IMG/M
3300002966	Hot spring thermophilic microbial communities from Obsidian Pool, Yellowstone National Park, USA - OP-RAMG-01	Environmental	Open in IMG/M
3300003542	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS900_Dependable_DNA	Environmental	Open in IMG/M
3300003830	Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser 4/9/14 3 um filter	Environmental	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M
3300004185	Groundwater microbial communities from aquifer - Crystal Geyser CG13_big_fil_rev_8/21/14_2.50	Environmental	Open in IMG/M
3300004208	Groundwater microbial communities from aquifer - Crystal Geyser CG11_big_fil_rev_8/21/14_0.20	Environmental	Open in IMG/M
3300004209	Groundwater microbial communities from aquifer - Crystal Geyser CG22_combo_CG10-13_8/21/14_all	Environmental	Open in IMG/M
3300004210	Groundwater microbial communities from aquifer - Crystal Geyser CG10_big_fil_rev_8/21/14_0.10	Environmental	Open in IMG/M
3300005235	Groundwater microbial communities from aquifer - Crystal Geyser CG08_land_8/20/14_0.20	Environmental	Open in IMG/M
3300005573	Hot spring thermophilic microbial communities from Obsidian Pool, Yellowstone National Park, USA - OP-RAMG-01 (SPADES assembly)	Environmental	Open in IMG/M
3300005613	Saline sediment microbial communities from Etoliko Lagoon, Greece - sediment	Environmental	Open in IMG/M
3300005645	Brackish water microbial communities from Lake Sakinaw in Canada: eDNA_2 (120m)	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300007964	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-24	Environmental	Open in IMG/M
3300008002	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-14	Environmental	Open in IMG/M
3300008007	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-10	Environmental	Open in IMG/M
3300008095	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-16	Environmental	Open in IMG/M
3300008255	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-01t	Environmental	Open in IMG/M
3300009031	Microbial communities from groundwater in Rifle, Colorado, USA - 3D_0.1um	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009296	Microbial communities from groundwater in Rifle, Colorado, USA-3A_0.2um	Environmental	Open in IMG/M
3300009503	Hot spring microbial communities from Yellowstone National Park - Yellowstone National Park OP-RAMG-02	Environmental	Open in IMG/M
3300009537	Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - D-2W	Environmental	Open in IMG/M
3300009538	Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - H-2W	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013092	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150m	Environmental	Open in IMG/M
3300013125 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11.25m	Environmental	Open in IMG/M
3300013127 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cm	Environmental	Open in IMG/M
3300013133 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s1_kivu2a2	Environmental	Open in IMG/M
3300014574	Groundwater microbial communities from the Olkiluoto Island deep subsurface site, Finland - KR11_S1_MetaG	Environmental	Open in IMG/M
3300014656	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - MM_PC_MetaG	Environmental	Open in IMG/M
3300014911	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay16, Core 4569-2, 12-15 cm	Environmental	Open in IMG/M
3300015370	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - OS_PC_MetaG	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020171	Groundwater microbial communities from the Olkiluoto Island deep subsurface site, Finland - KR11_0.1 MetaG	Environmental	Open in IMG/M
3300020198	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015019 Mahale Deep Cast 65m	Environmental	Open in IMG/M
3300020364	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556021-ERR599037)	Environmental	Open in IMG/M
3300023177 (restricted)	Freshwater microbial communities from Lake Matano, South Sulawesi, Indonesia - Watercolumn_Matano_2014_112_MG	Environmental	Open in IMG/M
3300024995	Groundwater microbial communities from aquifer - Crystal Geyser CG09_land_8/20/14_0.10 (SPAdes)	Environmental	Open in IMG/M
3300025012	Soil microbial communities from Rifle, Colorado, USA - Groundwater C1	Environmental	Open in IMG/M
3300025015	Contaminated groundwater microbial communities from Rifle, Colorado, USA - Rifle Groundwater A1 (SPAdes)	Environmental	Open in IMG/M
3300025018	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-01t (SPAdes)	Environmental	Open in IMG/M
3300025021	Groundwater microbial communities from aquifer - Crystal Geyser CG08_land_8/20/14_0.20 (SPAdes)	Environmental	Open in IMG/M
3300025081	Groundwater microbial communities from Rifle, Colorado - Rifle Oxygen_injection B2 (SPAdes)	Environmental	Open in IMG/M
3300025095	Groundwater microbial communities from Rifle, Colorado - Rifle Oxygen_injection A2 (SPAdes)	Environmental	Open in IMG/M
3300025150	Groundwater microbial communities from aquifer - Crystal Geyser CG10_big_fil_rev_8/21/14_0.10 (SPAdes)	Environmental	Open in IMG/M
3300025308	Soil microbial communities from Rifle, Colorado, USA - Groundwater A2	Environmental	Open in IMG/M
3300025311	Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.2 (SPAdes)	Environmental	Open in IMG/M
3300025317	Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.1 (SPAdes)	Environmental	Open in IMG/M
3300025323	Soil microbial communities from Rifle, Colorado - Rifle CSP2_plank highO2_0.1 (SPAdes)	Environmental	Open in IMG/M
3300025837	Groundwater microbial communities from aquifer - Crystal Geyser CG02_land_8/20/14_3.00 (SPAdes)	Environmental	Open in IMG/M
3300025850	Groundwater microbial communities from aquifer - Crystal Geyser CG22_combo_CG10-13_8/21/14_all (SPAdes)	Environmental	Open in IMG/M
3300027811	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeq	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027863	Hot spring thermophilic microbial communities from Obsidian Pool, Yellowstone National Park, USA - OP-RAMG-01 (SPAdes)	Environmental	Open in IMG/M
3300028028	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 296A	Engineered	Open in IMG/M
3300028032	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #1	Environmental	Open in IMG/M
3300028169	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2010_1_5_80m	Environmental	Open in IMG/M
3300028299	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2010_1_5_45m	Environmental	Open in IMG/M
3300028581 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_17m	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033991	Sediment microbial communities from Lake Vrana, Zadar, Croatia - 4 bact	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
YNP17_19600	2016842005	Hot Spring	MYLRHFVKGKKKYYYIAKAVRKGTSVIQKSVLYIGTADTLYEKLLNLKKK
TB_GS10_10DRAFT_100708272	3300000230	Groundwater	MHLRSFKKGKKKYYFLAKSEREGKKVIQKSILYVGTADTMYEKLTKKS*
JGI1357J11328_100539071	3300000574	Groundwater	MYLRSFKKGRKKYYYIAKAVRTGKKIVQKYVLYLGTADTIYEKMGKLLKKS*
JGI1356J14229_101962941	3300001380	Groundwater	MYFRHFTKRNKKYYYIARAVRKGKKITQKYVLYIGTADTLYEKLINLKKK*
GOS2247_10564211	3300001959	Marine	MYLRSFKKGRKKYYYIAKAVRKGNRVIQKSILYIGTADTMYKKLIGLKRKSQ*
C687J26635_100320244	3300002105	Groundwater	MYLRSFNKSGKKYYYIAKAVRKGTKVIQKSVLYIGTADKIYEKLRKH*
C687J26635_100370822	3300002105	Groundwater	MYLRSFIKGRKKYYYIAKAVRKGAQVIQKSILYIGTADTLYEKLISLKKK*
C687J26635_101001602	3300002105	Groundwater	MYLRSFKKGKKKYYYIAKAVRNGGKVIQKSILYLGNADNIYNKLHTK*
C687J26635_101032932	3300002105	Groundwater	MYLRHFTKGKKKYYYIAKAIRKGVSVIQKSVLYIGTADTLYEKLISLRKK*
C687J26635_101333182	3300002105	Groundwater	MYLRSFIKGRKRYYYIAKAVRKGLQVIQKSVLYIGTADTLYEKLKNLKKK*
C687J26635_101655452	3300002105	Groundwater	MYLRHFTKGKKKYYYIAKAVRKGVSVIQKSVLYIGTADTLYEKLISLRKK*
C687J26635_103203922	3300002105	Groundwater	MYFRHFTKGSKKYYYIAKAVRKGKKITQKFVLYIGTADTLYEKLKTLKKN*
C687J35174_101840972	3300002502	Soil	MYLRSFIKGGKKYYYVAKAVRKGTRVIQKSILYIGTADTLYEKLSSLKKK*
C687J35174_101908131	3300002502	Soil	MYLRNFIKGGKKYYYVAKAVRKGARVIQKSVLYIGTADTLYEKLISLKKK*
C687J35174_102788552	3300002502	Soil	MYLRSFKKGKKKYYYIAKAVRVGKRVIQKSVLYLGNADNIYKKLH
C687J35174_102895181	3300002502	Soil	MYLRNFIKGNKKYYYIAKAVRNGSKVIQKSVLYIGTADTLYEKLKNLKKK*
C687J35174_102929212	3300002502	Soil	MYLRSFKKGKKRYYYIAKAVRIKDRVIQKSVLYLGTADKIYKKLKSQK*
C687J35174_103032142	3300002502	Soil	MYLRSFKKGKKKYYYIAKAVRVGKRVIQKSVLYLGNADNIYKKLHTK*
C687J35174_106100561	3300002502	Soil	MYLRSFKKGKKKYYYIAQAVRKGKRVIQKSILYLGNADNIYKKLHTK*
C687J35174_107832672	3300002502	Soil	MYLRHFIKGGKKYYYIAKAVRNGARVIQKSILYIGTADTLYEKLNSLKKK*
C687J35504_100930911	3300002529	Soil	MYLRHFIKGNKKYYYIAKAVRKGVRVIQKSVLYIGTADTLYGKLVSLKKK*
JGI24721J44947_100412481	3300002966	Hot Spring	PYFLLSRLILMYLRHFVKGKKKYYYIAKAVRKGTSAIQKSVLYIGTADTLYKKLLNLKKN
FS900DNA_103682271	3300003542	Diffuse Hydrothermal Flow Volcanic Vent	MYLRFFKKGGKKYYYIAKAVREGGRVIQKSILYIGTADKLYEKLIKL
Ga0051980_100182552	3300003830	Groundwater	MYLRSFKKGKKKYYYIAKAVRIGKRVIQKSILYLGTADNIYKKLHTK*
Ga0051980_101297371	3300003830	Groundwater	MYLRSFKKGNKRYYYIAKAVRTGNKVIQKFVLYLGTTETIYNKIKSYK*
Ga0051980_102173422	3300003830	Groundwater	MYLRAFKKGGKKYYYIAKAVRKGLRVIQKSILYIGTADTLYEKLIKLKKRA*
Ga0055453_102957421	3300004006	Natural And Restored Wetlands	MYLRSFKKGKKRYYYIAKAVRTGKKVIQKSILYLGTAENIY
Ga0066642_100683391	3300004185	Groundwater	MYLRAFKKGGKKYYYIAKAVRKGLRVIQKSILYIGTADTLYEK
Ga0066640_101287482	3300004208	Groundwater	MMYLIFFKKGRKKYYYIAKAVREGDRVIQKSILYIGTADTLYKKLIQLKKKSK*
Ga0066649_101410443	3300004209	Groundwater	MYLRHFTKGKKKYYYIAKAVRKGTSVIQKSILYIGTADTLYEKLISLKKK*
Ga0066639_102059001	3300004210	Groundwater	MMYLRFFKKGRKKYYYIAKAVREGDRVIQKSILYIGTADTLYKKLIQLKKKSK*
Ga0066639_103264561	3300004210	Groundwater	MYLRHFIKGRKKYYYIAKSIRIKNRIIQKSILYVGTTDGLYEKLIKLKKN*
Ga0066639_103392171	3300004210	Groundwater	MYLRSFKKGKKKYYYIAKAVRIGKRVIQKSILYLGTADNIYKKLHTK
Ga0066639_103512631	3300004210	Groundwater	MYLRHFTKGKKKYYYIAKAVRKSTSVIQKSILYIGTADTLYEKLISLKKK*
Ga0066639_103650112	3300004210	Groundwater	MYLRSFKKGKKRYYYIAQAVRKGKRVIQKSVLYLGNADNIYKKLHTK*
Ga0066637_100461442	3300005235	Groundwater	MYLRSFKKGGKRYYYIAKAVRKGKRVIQKYVLYLGTADTLYEKLENFIKA*
Ga0066637_101596632	3300005235	Groundwater	MMYLRFFKKGGKKYYYIAKAVRKGTKVIQKSLLYIGTADTLYEKLMQLKKKSGS*
Ga0066637_101697891	3300005235	Groundwater	MYLRSFTKSGKKYYYIAKAVRKADKVVQKSILYIGTADTMYEKLIALKKF*
Ga0078972_11131233	3300005573	Hot Spring	MYLRHFTKGKKKYYYIAKAVRKGTSVIQKSVLYIGTADTLYEKLLNLKK
Ga0074649_10280112	3300005613	Saline Water And Sediment	MYLRSFTKNGKKYYYIAKAVRKGSKVIQKSILYVGTADTMYKKLTRLKEKS*
Ga0077109_11730792	3300005645	Brackish Water	MYLRSFIKGNKKYYYIAKAVRKGNKVIQKSILYVGTADTMYKKLVSLKKKS*
Ga0079037_1013946022	3300006224	Freshwater Wetlands	MYLRSFKKGKRKYYYIAKAIRLGKRVIQKSILYLGTADNIYKKLHTK*
Ga0073934_108060702	3300006865	Hot Spring Sediment	MYLRYFTKGKKKYYYIAKAVRKGASVIQKSVLYIGTADTLYKKLIPFKKK*
Ga0100400_11285732	3300007964	Aquifer	MYLRSFKKGGKRYYYIAKAVRKGKRVIQKYVLYLGTADTLYEKLENFI
Ga0100390_105202912	3300008002	Aquifer	FKKGGKKYYYIAKAVRKGLRVIQKSILYIGTADTLYEKLIKLKKRA*
Ga0100386_101627982	3300008007	Aquifer	MYLRAFKKGGKKYYYIAKVVRKGLRVIQKSILYIGTADTLYEKLIKLKKRA*
Ga0100392_10158442	3300008095	Aquifer	MYLRSFKKGKKKYYYIAKVVRIGKRVIQKSILYLGTADNIYKKLHTK*
Ga0100403_11140682	3300008255	Aquifer	MYLRHFTKGGKKYYYIAKAVRTGTKVIQKSILYIGTADTLYEKLIKLKKN*
Ga0103682_100350675	3300009031	Groundwater	MYLRSFIKGGKKYYYVARAVRTGKRVIQKYVLYIGTADTIYEKLKNLKKK*
Ga0103682_100696662	3300009031	Groundwater	MYLRFFKKGRKKYYYIAKAVRKGVRVIQKSILYVGTADTLYEKLVKLKKRA*
Ga0105095_102442522	3300009053	Freshwater Sediment	MYLRSFKKGKKKYYYIAKAVRKGKRVIQKSILYLGTADNIYKKLHTK*
Ga0103681_11922842	3300009296	Groundwater	MYLRHFTKRSKKYYYIAKAVRKGTRVVQKSILYIGTADKLYEKLIKLGKK*
Ga0123519_102121542	3300009503	Hot Spring	MYLRHFSKGKKKYYYIAKAVRKGARVIQKSILYIGTADTLYEKLINLKKK*
Ga0129283_100547323	3300009537	Beach Aquifer Porewater	MYLRSFEKGRKKYYYIAKAVRKGDKVIQKSILYVGTADTMYEKLIELKKLKKS*
Ga0129287_1000365210	3300009538	Beach Aquifer Porewater	MYFRHFIKGNKKYYYIARAVRKGKKITQKFVLYIGTADTLYEKLKNLEKK*
Ga0129287_100453551	3300009538	Beach Aquifer Porewater	MYLRHFTKAGKKYYYIAKAVRKGKKVIQKSVLYLGTADTLFEKIAPSKKK*
Ga0129287_100952591	3300009538	Beach Aquifer Porewater	MKGGKKYYYIAKAVRNGVKVIQKSILYIGTADTLYEKLKSLKKK*
Ga0129287_105092051	3300009538	Beach Aquifer Porewater	MYLRSFKKGKSRYYYIAKAVRKGKKVIQKSILYLGTADNIYKKLHTK*
Ga0153916_121577792	3300012964	Freshwater Wetlands	MYLRSFKKGKKRYYYIAKAIRKGAKVIQKSILYLGTADTIYNLVAKLKKKA*
Ga0163199_10668622	3300013092	Freshwater	MYLRSFKKGEKKYYYIAKAVRTGLRVIHKSVLYIGTADTLYEKLVKLKKRA*
(restricted) Ga0172369_101616312	3300013125	Freshwater	MYLRSFLKGGKKYYYIAKAVRKGAKVIQKSVLYIGTADTLYEKLISLKKE*
(restricted) Ga0172365_101373872	3300013127	Sediment	MYLRSFKKGGKKYYYLARAVRKGKRVVQKYVLYIGTAENLYKKLTGSKKSGEDK*
(restricted) Ga0172365_104317612	3300013127	Sediment	MYLRSFKKGGKKYYYIAKAVRKGIRVVQKYVLYLGTADTIYKKLKSSTKA*
(restricted) Ga0172362_110784602	3300013133	Sediment	MYLRSFKKGGKKYYYLARAVRKGKRVVQKYVLYIGTAENLY
Ga0180011_1016161	3300014574	Groundwater	MHLRSFKRGKKRYYFIAKSVRNGKKVIQKSILYLGTADTIYKKLLKVKNSKN*
Ga0180007_100858472	3300014656	Groundwater	MYLRSFKKGKKRYYYIAKAIRIGKRVIQKSVLYLGTADNIYKKLHTK*
Ga0180007_106372481	3300014656	Groundwater	MYLRSFTKGGKKYYYIAKAVRKGNKVVQKSILYVGTADIMYKKLIELKKKSN*
Ga0180301_100842113	3300014911	Marine Sediment	MYLRSFKKSGKKYYYIAKAVRKGAKVIQKSILYVGTADTMYKKLIELKKKSN*
Ga0180009_101094711	3300015370	Groundwater	MYLRFFKKGGKKYYYIAKAVREGGRVIQKSVLYVGTADTLYEKLIKLKKNSK*
Ga0180009_101119142	3300015370	Groundwater	MYLRHFVKGGKKYYYIAKAVRKGVRVIQKSVLYVGTADTLYEKLIILKKK*
Ga0194113_101599382	3300020074	Freshwater Lake	MYLRFFEKGGKKYYYIAKAVREGLRVIQKSVLYIGTVDTLYKKLIKLKKRA
Ga0180732_11101021	3300020171	Groundwater	MYLRSFKKGNKRYYYIAKAVRTGKKVVQKVVLYLGTAETIFNKIKSGK
Ga0194120_105118531	3300020198	Freshwater Lake	MYLRSFTKGGKKYYYIARAVRKGDKVIQKSVLYLGTADTIFEKMSSIKRD
Ga0211538_10471721	3300020364	Marine	MYLRSFTKNGKKYYYIAKAVRKGSKVIQKSILYVGTADTMYEKLIGLKKKSN
(restricted) Ga0233423_100083654	3300023177	Freshwater	MYLRFFEKGGKKYYYIAKAVRRGLKVIQKSVLYIGTADSLYEKLIKLKKVV
(restricted) Ga0233423_100264042	3300023177	Freshwater	MYLRSFKKGGKRYYYIAKAIRRGVRVVQKYVLYLGTADTLYKKLKSSTKA
(restricted) Ga0233423_100786672	3300023177	Freshwater	MYLRSFIKGGKKYYYIAKAVRKGTKVIQKSVLYLGTADTIFEKLKSSDKK
(restricted) Ga0233423_101184891	3300023177	Freshwater	MYLRSFKKGKKKYYYIAKAVRTGKRVIQKSVLYLGTADSIYKKLHNK
(restricted) Ga0233423_102307462	3300023177	Freshwater	MMYLRSFTKGGKKYYYIAKAVRKGKKVIQKSVLYIGTADKIYEKLKKD
Ga0210018_10060486	3300024995	Groundwater	MYLRAFKKGGKKYYYIAKAVRKGLRVIQKSILYIGTADTLYEKLIKLKKRA
Ga0210018_10372432	3300024995	Groundwater	MYLRSFKKGGKRYYYIAKAVRKGKRVIQKYVLYLGTADTLYEKLENFIKA
Ga0209727_10503531	3300025012	Soil	MYLRSFIKGGKKYYYVARAVRTGKRVIQKYVLYIGTADTIYEKLKNLKKK
Ga0209210_10360371	3300025015	Contaminated Groundwater	MYLRNFIKGNKKYYYIAKAVRNGSKVIQKSVLYIGTADTLYEKLKNLKKK
Ga0210043_10936692	3300025018	Aquifer	MYLRHFTKGGKKYYYIAKAVRTGTKVIQKSILYIGTADTLYEKLIKLKKN
Ga0210017_10169768	3300025021	Groundwater	MYLRAFKKGGKKYYYIAKVVRKGLRVIQKSILYIGTADTLYEKLIKLKKRA
Ga0208953_10357051	3300025081	Groundwater	MYLRFFKKGRKKYYYIAKAVRKGVRVIQKSILYVGTADTLYEKLVKLKKRA
Ga0208977_10352932	3300025095	Groundwater	MYLRFFKKGRKKYYYIAKAVRKGVRVIQKSILYVGTADTLY
Ga0210057_11237433	3300025150	Groundwater	MYLRAFKKGGKKYYYIAKAVRKGLRVVQKSILYIGTADTLYEKLIKLKKRA
Ga0210057_11506901	3300025150	Groundwater	MYLRSFKKGGKRYYYIAKAVRKGKRVIQKYVLYLGTADTLYEKLENFIKV
Ga0210057_12401572	3300025150	Groundwater	MYLRSFKKKNKRYYYVAKAIRAGKKVIQKSILYLGTAETIYNKIKSHK
Ga0209211_100716872	3300025308	Soil	MYLRSFIKGGKKYYYVAKAVRKGTRVIQKSILYIGTADTLYEKLSSLKKK
Ga0209211_102048731	3300025308	Soil	MYLRSFNKSGKKYYYIAKAVRKGTKVIQKSVLYIGTADKIYEKLRKH
Ga0209343_101860691	3300025311	Groundwater	MYLRHFIKGGKKYYYIAKAVRNGARVIQKSILYIGTADTLYEKLNSLKKK
Ga0209343_108174191	3300025311	Groundwater	MYLRNFIKGGKKYYYVAKAVRKGARVIQKSVLYIGTADTLYEKLISLKKK
Ga0209541_100235091	3300025317	Groundwater	MYFRHFTKGSKKYYYIAKAVRKGKKITQKFVLYIGTADTLYEKLKTLKKN
Ga0209541_102118763	3300025317	Groundwater	MYLRSFKKGKKKYYYIAKAVRVGKRVIQKSVLYLGNADN
Ga0209541_102135062	3300025317	Groundwater	MYLRHFTKRNKKYYYIAKAVRKGARVIQKAILYIGTADTLYEKLKNLQKK
Ga0209541_104035513	3300025317	Groundwater	MYLRSFIKGRKKYYYIAKAVRKGAQVIQKSILYIGTADTLYEKLISLKKK
Ga0209542_1000326010	3300025323	Soil	MYLRSFIKGRKRYYYIAKAVRKGLQVIQKSVLYIGTADTLYEKLKNLKKK
Ga0209542_102738303	3300025323	Soil	MYLRHFAKGKKKYYYIAKAVRKGASVIQKSVLYIGTADTLYEKLI
Ga0209542_102879572	3300025323	Soil	MYLRSFKKGKKRYYYIAKAVRIKDRVIQKSVLYLGTADKIYKKLKSQK
Ga0209542_103125293	3300025323	Soil	MYLRHFTKGKKKYYYIAKAVRKGVSVIQKSVLYIGTADTLYEKLISLRKK
Ga0209542_103415752	3300025323	Soil	MYLRSFKKGKKKYYYIAQAVRKGKRVIQKSILYLGNADNIYKKLHTK
Ga0209542_106661582	3300025323	Soil	KGGKKYYYVAKAVRKGIRVIQKSILYIGTADTLYEKLIHLKKK
Ga0210016_11515772	3300025837	Groundwater	MYLRFFKKGKKKYYYIAKAVRTGVRVIQKSILYIGTADTLYKKLIQLKKKSGS
Ga0210050_10489601	3300025850	Groundwater	VMYLRAFKKGGKKYYYIAKVVRKGLRVIQKSILYIGTADTLYEKLIKLKKRA
Ga0256868_101066472	3300027811	Soil	MYLRSFSKRNRKYYYIAKAVRMGKRVVQKSILYIGTIDSLYEKLIKLKKKA
Ga0209726_100499135	3300027815	Groundwater	MYLRSFKKGRKKYYYIAKAVRTGKKIVQKYVLYLGTADTIYEKMGKLLKKS
Ga0207433_102375692	3300027863	Hot Spring	MYLRHFSKGKKKYYYIAKAVRKGARVIQKSILYIGTADTLYEKLINLKKK
Ga0265292_10404061	3300028028	Landfill Leachate	MYLRSFKKSGKKYYYIAKAVRKGKRVIQKYVLYLGTADTLYEKLKKLIKV
Ga0265292_10476373	3300028028	Landfill Leachate	MYLRSFKHGKKRYYFIAKAVRKGKKVIQKSILYVGSIDSLYEK
Ga0265296_10689612	3300028032	Groundwater	MYLRHFVKGRKKYYYIAKAVRKGARVIQKSVLYVGTADTLYEKLITLKKK
Ga0265296_10823112	3300028032	Groundwater	MYLRSFKHGKKRYYFIAKAVRKGKKVIQKSILYVGSIDSLYEKLI
Ga0268279_11592831	3300028169	Saline Water	MYLRSFIKGNKKYYYIAKAVRKGNKVIQKSILYVGTADTMYKKLVSLKKKS
Ga0268276_10706901	3300028299	Saline Water	MYLRSFKKGNKKYYYIAKAVRTGKRVIQKFVLYLGTADRVYDKLKSK
(restricted) Ga0247840_101653901	3300028581	Freshwater	MHLRSFKKGKKKYYFIAKSERKGKRVIQKSVLYIGTADTMYEKLAKKS
Ga0247727_103264222	3300031576	Biofilm	MYLRYFNKGKKKYYYIAKAVRNGTRVIQKSILYIGTADTLYEKLIKLKKK
Ga0315293_110455381	3300031746	Sediment	MYLRSFKKGKKKYYYIAKAVRKGKRVIQKSILYLGNADNIYKKLHTK
Ga0315288_103724901	3300031772	Sediment	MYLRSFKKGKKKYYYIAKAVREGKRVIQKSILYLGNADNIYR
Ga0315297_115983341	3300031873	Sediment	MYLRSFKKGNKRYYYIAKAVRTGEKVIQKVVLYLGSAET
Ga0214473_104255911	3300031949	Soil	MYLRHFIKGGKKYYYIARAVRTGTKVIQKSILYIGTADTLYEKLKKLKKN
Ga0315278_104453482	3300031997	Sediment	MYLRHFTKKKRKYYYIAKAVRKGSRIIQKSILYIGTADTLYEKLKNLKKK
Ga0315284_102055156	3300032053	Sediment	MYLRSFKKGGKKYYYIAKAVRKGVRVIQKSILYVGTADTLYEKLMQLKKLPK
Ga0315277_104541932	3300032118	Sediment	MYLRSFKKGGKKYYYLAKAVRKGTRVIQKYVLYIGTAENLYKKLTGSKKSSEDKRIPSH
Ga0315286_107402862	3300032342	Sediment	MYLRSFKKGKKRYYYIAKAVRIGKRVIQKSILYLGNADNIYKKLHTK
Ga0315286_112365452	3300032342	Sediment	MYLRSFKKGKKRYYYIAKAVRKGSKVIQKSILYLGTADSIYERLKKNS
Ga0315273_132185252	3300032516	Sediment	MYLRSFKKGKKKYYYIAKAVRIGKRVIQKSILYLGNANNIYKKLHTKXAMFYT
Ga0334965_0008815_5589_5744	3300033991	Sediment	MYLRSFTKNGKKYYYIAKAVRKGDKVIQKSILYVGTADTMYKKLIGLKQKS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters