Sample 2010170001

Basic Information
IMG/M Taxon OID	2010170001 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0055739 \| Gp0050996 \| Ga0026301
Sample Name	3_050719R
Sequencing Status	Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

2010170001 Open in IMG/M

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0055739 | Gp0050996 | Ga0026301

Sample Name

3_050719R

Sequencing Status

Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	28728092
Sequencing Scaffolds	33
Novel Protein Genes	35
Associated Families	21

Dataset Contents

Total Genome Size

28728092

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	23
Not Available	4
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	4
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas → Fimbriimonas ginsengisoli	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Microcoleus → unclassified Microcoleus → Microcoleus sp. FACHB-672	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → cellular organisms → Bacteria

Not Available

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas → Fimbriimonas ginsengisoli

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Microcoleus → unclassified Microcoleus → Microcoleus sp. FACHB-672

Ecosystem Assignment (GOLD)
Name	Hot Spring Microbial Communities From Bison Spring, Yellowstone National Park, Usa, Analyzing Thermal Gradients
Type	Environmental
Taxonomy	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring → Hot Spring Microbial Communities From Bison Spring, Yellowstone National Park, Usa, Analyzing Thermal Gradients

Ecosystem Assignment (GOLD)

Name

Hot Spring Microbial Communities From Bison Spring, Yellowstone National Park, Usa, Analyzing Thermal Gradients

Type

Environmental

Taxonomy

Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring → Hot Spring Microbial Communities From Bison Spring, Yellowstone National Park, Usa, Analyzing Thermal Gradients

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → hot spring → spring water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

aquatic biome → hot spring → spring water

Earth Microbiome Project Ontology (EMPO)

Free-living → Non-saline → Water (non-saline)

Location Information
Location	Bison Pool / Rosette Geyser, Yellowstone National Park
Coordinates	Lat. (^o)	44.6	Long. (^o)	-110.9	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

Bison Pool / Rosette Geyser, Yellowstone National Park

Coordinates

Lat. (^o)

44.6

Long. (^o)

-110.9

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F007225	Metagenome / Metatranscriptome	355	Y
F014385	Metagenome / Metatranscriptome	263	Y
F016403	Metagenome / Metatranscriptome	247	Y
F023603	Metagenome / Metatranscriptome	209	N
F024968	Metagenome / Metatranscriptome	203	Y
F028182	Metagenome / Metatranscriptome	192	N
F031015	Metagenome / Metatranscriptome	183	Y
F038030	Metagenome / Metatranscriptome	166	Y
F039409	Metagenome / Metatranscriptome	164	Y
F041223	Metagenome / Metatranscriptome	160	Y
F045123	Metagenome / Metatranscriptome	153	N
F047697	Metagenome / Metatranscriptome	149	Y
F051584	Metagenome / Metatranscriptome	144	Y
F056638	Metagenome / Metatranscriptome	137	N
F063724	Metagenome / Metatranscriptome	129	N
F067777	Metagenome / Metatranscriptome	125	N
F070749	Metagenome / Metatranscriptome	122	Y
F078762	Metagenome / Metatranscriptome	116	Y
F081382	Metagenome / Metatranscriptome	114	N
F083525	Metagenome / Metatranscriptome	112	N
F087246	Metagenome / Metatranscriptome	110	N

Family

Scaffold	Taxonomy	Length	IMG/M Link
BISONR_BXAS11834_y3	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
BISONR_BXAS15200_x2	Not Available	1030	Open in IMG/M
BISONR_BXAS15218_y2	Not Available	1044	Open in IMG/M
BISONR_BXAS16827_g1	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	849	Open in IMG/M
BISONR_BXAS21218_b1	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
BISONR_BXAS23892_x1	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
BISONR_BXAS25716_b1	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
BISONR_BXAS33285_y2	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	739	Open in IMG/M
BISONR_BXAS34117_y2	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
BISONR_BXAS38011_b1	Not Available	722	Open in IMG/M
BISONR_BXAS39919_y2	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
BISONR_BXAS9066_y2	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
BISONR_C1586	All Organisms → cellular organisms → Bacteria	3769	Open in IMG/M
BISONR_C1656	All Organisms → cellular organisms → Bacteria	3565	Open in IMG/M
BISONR_C182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas → Fimbriimonas ginsengisoli	4294	Open in IMG/M
BISONR_C2584	All Organisms → cellular organisms → Bacteria	4773	Open in IMG/M
BISONR_C2607	All Organisms → cellular organisms → Bacteria	5900	Open in IMG/M
BISONR_C3349	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2802	Open in IMG/M
BISONR_C3579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Microcoleus → unclassified Microcoleus → Microcoleus sp. FACHB-672	2743	Open in IMG/M
BISONR_C3798	All Organisms → cellular organisms → Bacteria	7500	Open in IMG/M
BISONR_C3911	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
BISONR_C4066	All Organisms → cellular organisms → Bacteria	3781	Open in IMG/M
BISONR_C415	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
BISONR_C4477	All Organisms → cellular organisms → Bacteria	3575	Open in IMG/M
BISONR_C5537	Not Available	2514	Open in IMG/M
BISONR_C6016	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
BISONR_C6918	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
BISONR_C7389	All Organisms → cellular organisms → Bacteria	3915	Open in IMG/M
BISONR_C7390	All Organisms → cellular organisms → Bacteria	1714	Open in IMG/M
BISONR_C7502	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	827	Open in IMG/M
BISONR_C769	All Organisms → cellular organisms → Bacteria	2326	Open in IMG/M
BISONR_C7719	All Organisms → cellular organisms → Bacteria	2336	Open in IMG/M
BISONR_C7769	All Organisms → cellular organisms → Bacteria	4054	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
BISONR_BXAS11834_y3	BISONR_296320	F067777	MPKLTIEVDPKAWQRLHEQAERQGLTPEALARQLLLGELRSGGKRGRRRDRGNESLYAATLPRGSLQRVLATLNLIHTQIPLDTPPPSREEVDAYLEQERASWENSDGV
BISONR_BXAS15200_x2	BISONR_313930	F051584	MTRTEQVLQRVLDVLRDDIEAAVRSNPTVYDDCPLPEGYYFGLPDLRRVSAMPIVAVELDSETLATRTLGGVGVGRRERVVPVLVVIAHAHREEERLMRQLIQLCDAVVQSLERVPQSALWLIQEVGLVDFSPPIEGEQSMPFVRYASVRAVVQVRHARGEVG
BISONR_BXAS15218_y2	BISONR_314110	F023603	VLYTTADFSGQYRLDSNAITEADYQRAIDEHERTLLEHFFDPASVDKIYAALPSSPPAVGVRNVMRDLALPFIFGRIKMGVGSSMAGEPNTRGYTRIGYTPYLAWRGSETLRRLMRFAPFVVQTELLAPSTTVAYPSPIPQAPDFVAIGDPVVAYTAAGEVRTTVVGVTAMDITLADPLPAGQVKIIVENLRVRISGAYLTF
BISONR_BXAS16827_g1	BISONR_322740	F047697	MNLTILARLAPILLLLSIACESGKKGTFQLPPDLGKGLTPADSLRAVLNYLEGRREYEAETLRFHYMYEYIRTLARQRTDTLPALVQELRSWAQKSQYPLGEGVT
BISONR_BXAS21218_b1	BISONR_344250	F041223	MQPKVCLVLNNLGNFNRAWTQILRNLGIDYTLCIATSTAASANIQTPQGVFAAGSPDLLGYFRQFDAVILCDN
BISONR_BXAS23892_x1	BISONR_358250	F045123	MARRAKPSGKPTTRVRETLTRLGYAEHEDFEYEVEVRLYGNRRLYADVMLFQGDTPLVVVEVEGHARQQRAGYEEARLKGAAWNLENPVPLLWVAAGNHDALYQLQPSQSSIQYAPLDGEPPAELLAPARLLEAIGDYLRRTETEAGQELRYREIFQRALAESRGNSAHEKFRNW
BISONR_BXAS25716_b1	BISONR_367530	F024968	MQPKVCLVLFSFGTFNRAWTQILRNLGIDYTLCIATSGGTGANIQTPQGVFAAGSPGLRGYFRQFDAVILCDNTSNLAATSLINYSVFWMRWNDPEDPAFLFFNPHFSAAITESAYNSNFPSDFPIVRPSPSDIAGTLYAADGGSASSISLLGVGATSGRGACVLFLAENIRAHVMTICNTHTNNIPYYWKLDTAKHSVLASTTYTHRVARNGKAGEILAVPAPPISSEDTETYPADCVVAYRYRNIF
BISONR_BXAS33285_y2	BISONR_402500	F070749	MNPTILTRFAPILLLLSIACQGGRKSTFQLPPDLGKGLSPADSLQAVLNYLEGQKAYEAETLRFHYMYEYIRTLARDKPDTLPALVQELQSWAQKSQYPIGEGVAALGEAVGWWIQGQYDSALSRAQTALRIFQEKERSDYEGKTHNLIGGIHYAQGRYA
BISONR_BXAS34117_y2	BISONR_407350	F081382	MSKHGEVLEIAILPAGGRAKQVVQRALSKRRAQIRVHSMCDIADARAPTLVLIDGSALQGGESALAGAITMLKQSAWRDAPIVILDDSGSDLRRGFAAGYAARIRLDSSPEAIAQLIEKMMPTAV
BISONR_BXAS38011_b1	BISONR_429550	F047697	MNPTILARLAPILLLLSIACEGGKKSTFQLPPDIGKGLTPDDSLRAVLNYLEGRREYQAETLRFHYMYEYIRTLARQKPDTLPALVQALRSRAQKS
BISONR_BXAS39919_y2	BISONR_439390	F024968	MQPKVCLVLFSFGTFNRAWTQILRNLGIDYTLCIATSGGTGANIQTPQGVFAAGSPGLRGYFRQFDAVILCDSTNNLAATSLINYSVFWMRWNDPEDPAFLFFNPHFSTAITESAYNSNFPSDFPIVRPSPSDIAGTLYAADGGSASSISLLGVGATSGRGACVLFLAENIRAHVMTICNTHTNNIPYYWKLDTAKHSVLASTTYTHRVARNGKAGEILAVPAPPISSEDTETYPADCVV
BISONR_BXAS39919_y2	BISONR_439400	F031015	WGRIEIPSTGDGYYDQYRIEVQRTAGSSNYNLLSKIVGVR
BISONR_BXAS9066_y2	BISONR_283610	F083525	VLWEGRTRCDSLXRSLNGDVVAILPTVQGTTPYDRLYWTGYALGSAPVNVNMRVLARAVDLNGVPLGSGWRAIGQATIQTPPLRWFRVEIPEGHWDEYRLEVRSATPRLVYSRLIGSQGYWRE
BISONR_C1586	BISONR_43890	F014385	VKPCELPDWWQLVQLALVRSALEQLAPEEERAVWLYAEGARLPKRERQLAETAIAKVRRMLNLE
BISONR_C1656	BISONR_45860	F067777	MPKLTIEVDPKAWQLLHQQAELRGLTPEALAQQLLLGELRARGKRSRRRDMDNESLHAASLPRGSLQRVFTTLERIDTLLPLDTPPPSREEVDAYLEQERASWENPDGV
BISONR_C182	BISONR_05330	F081382	MSKHGEGLEIAIVPAGGQAKQVVQRALGKRRAHIRVHSLCDIADASAPMLVLIDGSALQGGESALAGAITMLKQSAWRDAPIVILDDSGADLRRGFAAGYAARIRLDSSPEAIAQLIEKMMHTAV
BISONR_C2584	BISONR_72590	F067777	MPKLTIEVDPKAWQLLHQQAELRGLTPEALAQQLLLGELRAGGKRSRRRDMDNESLHAASLPRGSLQRVFTTLERIDTLLPLDTPPPSREEIDAYLEQERASWENSDGV
BISONR_C2607	BISONR_73220	F063724	MPSSWLRRWRDAYYTENPVVWLLAKTESELCLRQISAPEPAEAGSAPSRLQLLKSDPVYSTRYFLWADEKEFERTLLVPWHLPSNRWMPVSDQIYLAVASLITMTVLVIHYALAKSPVWVGAVGVGVVIVMFFAPMARPMLALHSLAQTLTAETPLHIGVSRLTPAHLVYGALLYGVGRIARTSAVYGLLPALLVATTAQGTVFRGVPTAILLWGYSVCVGALWILCTLAIVYGQATRLYGASRDWVRWQNILALAAGLLGASLLAVSVPAPVPVPALTAWVHTPLWWWGFVPPLGIVSGLAVEFHPLWTLSHIVGMLLYIGLGVIACLRLLRGVWRSQEQPLNAETEGWE
BISONR_C3349	BISONR_94550	F078762	VICLADGKKLKGGIERGDVLSLYELRGESLFTKAFYMCSHHMYLLSQLNKKLPSTSDTAKAFNTNTATPSAATE
BISONR_C3579	BISONR_100540	F028182	MPKVSISEAARRLETTEEVIREWIRLGLLDVELPSAKPRRTRELNPAFQPTSATPEPNVDLEQLYQ
BISONR_C3798	BISONR_106980	F028182	MRYNTLVMPKVSISEAARRLETTEEVIREWIRLGLLDVELPSAKPRRTRELNLAFQPTSAVPEPKVDLEQLYEVAEREGWLLLSLEAWDAADSEP
BISONR_C3911	BISONR_111080	F038030	QVANAKPVPADTLLVATTAVTTDANRDLLGSTATELPTLDGCMQYRKLVWFYFRASDAATTYRVLARATDHNGAPLGSGWQELATGTLPGGANSWGRIEIPSAGDGYYDQYRIEVRVTSGSGYFLTSKIVGVR
BISONR_C4066	BISONR_115510	F028182	MRYNTLVMPKVSISEAARRLETTEEVIREWIRLGLLDVEPLPLERQRAKENILALHVSGIDLDSCVRGIDSEPRVDLEQLYEVAEREGWLLLSLEAWDAADSEP
BISONR_C415	BISONR_11860	F063724	MPSSWLRRWRDAYYTENPIVWLLAKTESELCLRQISAPEPAEAGSAPSRLQLLKSDSVYSTRYFLWADEKEFERTLLVPWHLPSNRWLPLSDQLYLACASLVTMTALVIHYALAKSPVWVGAIGVGVVIVMFFAPMARPMLALHSLAQTLTAETPLHVGVSRLTPAHLVYGALLYGVGRIARTSAVYGLLPALLVATIAQGTVFRGAPTAILLWGYSVCVGALWILCTLAILYGQTTRLHGASHDWVRWQNIVALATSLLGAGLLASSIPALVPAPAPTEWIRTPLWWWGFAPPLGIVSGLAVEFHPLWTLSHIVGMLFWVALGAVGCLRLLRGVWRSQEGAFDAEREGWE
BISONR_C4477	BISONR_127250	F081382	MSKHGEVLEIAILPAGGRAKQVVQRALSKRRAQIRVHSMCEIADARAPTLVLIDGSALQGGESALAEVITLLQQSAWRDAPIVILDDSGADLRRGFAAGYAARIRLDSSPEAIAQLIEKMMHTAV
BISONR_C469	BISONR_13370	F007225	MRKFAAITALLAVATTASFAQFGIYGATADGGSTGLGGGFIGGFENGQEFDLLIRMDVPPGVPRFPRNGGGSLAFNFNPRYIDIKLFDVVTGDPITIAQAVAGAAVGEIVNLGAYAYPGTTIAGRDLVGAAAVGARKNADGTIGVRIAFLSTSPAVSNATHAEPFVRTGPEDDDGNRRLPVVIVNWLNIRDDFGVNGTYTVQNEGSFVLVYESAAPGASFRTQEVPINGFSFTYVPEPAS
BISONR_C5537	BISONR_158170	F067777	MPKLTIEVDPKAWQLLHQQAELRGLTPEALAQQLLLGELRARGKRSRRRDRGNESLHAASLPRGSLQRVLATLNLIHTQIPLDTPPPSREEVDAYLEQERASWENSDGV
BISONR_C6016	BISONR_172690	F087246	MDWETWMDDTYEMCRALDALEHARQVMAFHAQGYRQVATLAGLALERIEAVRDSQNWVQLQEAIHEVEALLTSILLQATERGENLVECANGYGNRD
BISONR_C6918	BISONR_197110	F056638	MPSSWLRRWRDEYYTENPIVWLLAKTESELCLRQISAPEPAEAGSASSRLQLLKSAPVYSVYWTDEKEFERTLLAPWHLPSNRWLPLSDQLYLACASLVTMTVLVIHYALAKSPVWVGAIGVGVVIVMFFAPMARPMLALHSLAQTLTAETPLHIGVSRLTPAHLVYGAL
BISONR_C7389	BISONR_210200	F016403	MTPKVCLVMREFGIFNRAWTQILRNLGIDYTLCVTTGSGAGVSIQTPQGVFAAGSPDLRGYFRQFDAVILCDNTNDLAAPSFINYSVFWLRWNDPEEPCIPVFQSALFRGDYR
BISONR_C7390	BISONR_210240	F039409	MQPKVCLVLNNFGTFNRAWTQILRNLGIDYTLCIATSGGTGANIQTPQGVFSPSSPDLRGYFRQFDAVILCDSVNNLAATSLINYSVFWMSWNAPEDPAFLFFNPHFSAAITESAYNSNFPSDFPIVRPSPSDIAGTLYAADGGSASSISPLGVGAVSGRGACVLFPAENIRAHVMTICNTHTN
BISONR_C7502	BISONR_213340	F070749	MNPTTLARLVPILLLLSIACEGGKKSAFQLPPDLGKGLSPADSLQAVLNYLKGRREYEAETLRFHYMYEYIRTLARQKPDTLPVLVQALRSWAQKSQYPLGEGVAALGEAVGWRSQGQYDSALSRAQVALRI
BISONR_C769	BISONR_21640	F031015	IEIAATTDGYYDQYRIEVQRTAGSNYSLTSKIVGVR
BISONR_C7719	BISONR_219080	F063724	MPSSWLRRWRDEYSTENPIVWLLAKTESELCLRQISAPQPTEAGSAPSRLQLLKSDSVYSTRYFLWADEKEFERTLLAPWHLPSNRWMPVSDQSYLAVASLITMTVLVIHYALAKSPMWVGAIGVGVVIVMFFAPMARPMLALHSLAQTLTAETPLHIGVSRLTPAHLVYGALVYGVGRAARVSAVYGILPALLAATTAQGTVFRGLPTAILLWGYSVCVGALWILCTLAIVYGQATRLYGASRDWVRWQNILALAAGLLSASLLAVSVPAPVPVPALTAWVHTPLWWWGFVPPLGIVSGLAVEFHPLWTLSHIVGMLLYAGLGAAACLRLLRGVWRSQEQPLNAETEGWE
BISONR_C7769	BISONR_220510	F056638	MPSSWLRRWRDEYYTENPVVWLLAKTESELCLRQISAPEPAEAGSAPSRLQLLKSAPVYSVYWTDEKEFERTLLAPWHLPSNRWLPLSDQLYLACASLVTMTVLVIHYALAKSPVWVGAIGVGVVIVMFFAPMARPMLALHSLAQTLTAETPLHIGVSRLTPAHLVYGALLYGVRRIART

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

2010170001: 3_050719R

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences