Metagenome / Metatranscriptome Family F094578

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094578
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	93 residues
Representative Sequence	MIKKERPKWLLQRLKGMYFAMHCWKCKKFELPMDEYKQKCEGNIQKIIDNLEIKEMKFKEFNEIIKNSTFCKFEKRDFNNNCPICKKFGV
Number of Associated Samples	61
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	32.08 %
% of genes near scaffold ends (potentially truncated)	19.81 %
% of genes from short scaffolds (< 2000 bps)	55.66 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (91.509 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater (30.189 % of family members)
Environment Ontology (ENVO)	Unclassified (28.302 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (62.264 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.14% β-sheet: 3.39% Coil/Unstructured: 58.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF13280	WYL	28.85
PF08843	AbiEii	5.77
PF01909	NTP_transf_2	4.81
PF05168	HEPN	1.92
PF05707	Zot	1.92
PF01867	Cas_Cas1	0.96
PF13173	AAA_14	0.96
PF02498	Bro-N	0.96
PF01978	TrmB	0.96
PF08471	Ribonuc_red_2_N	0.96
PF08279	HTH_11	0.96
PF10049	DUF2283	0.96
PF01336	tRNA_anti-codon	0.96
PF11987	IF-2	0.96
PF04679	DNA_ligase_A_C	0.96
PF00590	TP_methylase	0.96
PF00932	LTD	0.96
PF09339	HTH_IclR	0.96
PF13480	Acetyltransf_6	0.96
PF04014	MazE_antitoxin	0.96
PF07927	HicA_toxin	0.96
PF13638	PIN_4	0.96
PF01425	Amidase	0.96
PF02245	Pur_DNA_glyco	0.96
PF00892	EamA	0.96
PF13338	AbiEi_4	0.96
PF00579	tRNA-synt_1b	0.96
PF13635	DUF4143	0.96
PF00293	NUDIX	0.96
PF05016	ParE_toxin	0.96
PF03083	MtN3_slv	0.96
PF13412	HTH_24	0.96
PF00344	SecY	0.96
PF08423	Rad51	0.96
PF01096	TFIIS_C	0.96
PF00297	Ribosomal_L3	0.96
PF01609	DDE_Tnp_1	0.96
PF02742	Fe_dep_repr_C	0.96
PF13749	HATPase_c_4	0.96
PF01435	Peptidase_M48	0.96
PF13656	RNA_pol_L_2	0.96
PF04967	HTH_10	0.96
PF01936	NYN	0.96
PF02661	Fic	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	5.77
COG4128	Zona occludens toxin, predicted ATPase	General function prediction only [R]	1.92
COG2250	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	1.92
COG1895	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	1.92
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.96
COG0087	Ribosomal protein L3	Translation, ribosomal structure and biogenesis [J]	0.96
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.96
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.96
COG4095	Sugar transporter, SemiSWEET family, contains PQ motif	Carbohydrate transport and metabolism [G]	0.96
COG3617	Prophage antirepressor	Mobilome: prophages, transposons [X]	0.96
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.96
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.96
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.96
COG2094	3-methyladenine DNA glycosylase Mpg	Replication, recombination and repair [L]	0.96
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.96
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.96
COG1594	DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS	Transcription [K]	0.96
COG1518	CRISPR-Cas system-associated integrase Cas1	Defense mechanisms [V]	0.96
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.96
COG1321	Mn-dependent transcriptional regulator MntR, DtxR family	Transcription [K]	0.96
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.96
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	0.96
COG0201	Preprotein translocase subunit SecY	Intracellular trafficking, secretion, and vesicular transport [U]	0.96
COG0180	Tryptophanyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.96
COG0162	Tyrosyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.96
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.34 %
Unclassified	root	N/A	5.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.34 %
Unclassified	root	N/A	5.66 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	91.51 %
Unclassified	root	N/A	5.66 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.83 %

Name	Rank	Taxonomy	Distribution
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	12.26 %
Unclassified	root	N/A	5.66 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.94 %

Name	Rank	Taxonomy	Distribution
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	12.26 %
Unclassified	root	N/A	5.66 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.94 %

Name	Rank	Taxonomy	Distribution
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	12.26 %
Unclassified	root	N/A	5.66 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001380\|JGI1356J14229_10000139	Not Available	76815	Open in IMG/M
3300001380\|JGI1356J14229_10010938	All Organisms → cellular organisms → Archaea	6118	Open in IMG/M
3300002105\|C687J26635_10004725	All Organisms → cellular organisms → Archaea	9437	Open in IMG/M
3300002105\|C687J26635_10073372	All Organisms → cellular organisms → Archaea	1678	Open in IMG/M
3300002105\|C687J26635_10089873	All Organisms → cellular organisms → Archaea	1453	Open in IMG/M
3300002105\|C687J26635_10099688	All Organisms → cellular organisms → Archaea	1349	Open in IMG/M
3300002105\|C687J26635_10131069	All Organisms → cellular organisms → Archaea	1109	Open in IMG/M
3300002105\|C687J26635_10306174	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	611	Open in IMG/M
3300002502\|C687J35174_10024253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	6870	Open in IMG/M
3300002502\|C687J35174_10443518	All Organisms → cellular organisms → Archaea	877	Open in IMG/M
3300002502\|C687J35174_10478011	All Organisms → cellular organisms → Archaea	828	Open in IMG/M
3300003358\|C687J50192_1000157	All Organisms → cellular organisms → Archaea	38465	Open in IMG/M
3300003358\|C687J50192_1000157	All Organisms → cellular organisms → Archaea	38465	Open in IMG/M
3300003358\|C687J50192_1003866	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	3768	Open in IMG/M
3300004142\|Ga0066638_1009426	All Organisms → cellular organisms → Archaea	2581	Open in IMG/M
3300004142\|Ga0066638_1012897	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	2219	Open in IMG/M
3300004210\|Ga0066639_10241226	All Organisms → cellular organisms → Archaea	1134	Open in IMG/M
3300004210\|Ga0066639_10328346	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	919	Open in IMG/M
3300004210\|Ga0066639_10520457	Not Available	660	Open in IMG/M
3300004239\|Ga0066650_10269912	All Organisms → cellular organisms → Archaea	841	Open in IMG/M
3300005077\|Ga0071116_1052191	All Organisms → cellular organisms → Archaea	2535	Open in IMG/M
3300005323\|Ga0074198_1026815	All Organisms → cellular organisms → Archaea	1208	Open in IMG/M
3300005645\|Ga0077109_1045665	All Organisms → cellular organisms → Archaea	1492	Open in IMG/M
3300005645\|Ga0077109_1050188	All Organisms → cellular organisms → Archaea	1378	Open in IMG/M
3300009031\|Ga0103682_10030385	All Organisms → cellular organisms → Archaea	3184	Open in IMG/M
3300009082\|Ga0105099_10109539	All Organisms → cellular organisms → Archaea	1524	Open in IMG/M
3300009285\|Ga0103680_10070959	All Organisms → cellular organisms → Archaea	1970	Open in IMG/M
3300009285\|Ga0103680_10211587	All Organisms → cellular organisms → Archaea	1032	Open in IMG/M
3300009285\|Ga0103680_10419900	All Organisms → cellular organisms → Archaea	698	Open in IMG/M
3300009502\|Ga0114951_10076551	All Organisms → cellular organisms → Archaea	1947	Open in IMG/M
3300009513\|Ga0129285_10588710	All Organisms → cellular organisms → Archaea	519	Open in IMG/M
3300009538\|Ga0129287_10018865	All Organisms → cellular organisms → Archaea	3077	Open in IMG/M
3300009538\|Ga0129287_10331502	All Organisms → cellular organisms → Archaea	672	Open in IMG/M
3300010302\|Ga0116202_10387630	All Organisms → cellular organisms → Archaea	624	Open in IMG/M
3300012931\|Ga0153915_10004524	All Organisms → cellular organisms → Archaea	12806	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10004421	All Organisms → cellular organisms → Archaea	10395	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10014875	All Organisms → cellular organisms → Archaea	5897	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10754131	All Organisms → cellular organisms → Archaea	568	Open in IMG/M
(restricted) 3300013129\|Ga0172364_10035354	All Organisms → cellular organisms → Archaea	3690	Open in IMG/M
(restricted) 3300013130\|Ga0172363_10290277	All Organisms → cellular organisms → Archaea	1083	Open in IMG/M
(restricted) 3300013130\|Ga0172363_10668979	All Organisms → cellular organisms → Archaea	653	Open in IMG/M
3300014204\|Ga0172381_10262486	Not Available	1377	Open in IMG/M
3300014496\|Ga0182011_10938283	All Organisms → cellular organisms → Archaea	538	Open in IMG/M
3300014613\|Ga0180008_1021827	All Organisms → cellular organisms → Archaea	2642	Open in IMG/M
3300014613\|Ga0180008_1094999	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300014656\|Ga0180007_10005742	Not Available	12388	Open in IMG/M
3300014656\|Ga0180007_10298452	All Organisms → cellular organisms → Archaea	997	Open in IMG/M
3300015370\|Ga0180009_10052525	All Organisms → cellular organisms → Archaea	2526	Open in IMG/M
3300022555\|Ga0212088_10316223	All Organisms → cellular organisms → Archaea	1116	Open in IMG/M
3300022556\|Ga0212121_10119314	All Organisms → cellular organisms → Archaea	1972	Open in IMG/M
3300024995\|Ga0210018_1030757	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300025012\|Ga0209727_1008010	All Organisms → cellular organisms → Archaea	5241	Open in IMG/M
3300025012\|Ga0209727_1078771	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	919	Open in IMG/M
3300025015\|Ga0209210_1006936	All Organisms → cellular organisms → Archaea	6412	Open in IMG/M
3300025015\|Ga0209210_1045483	All Organisms → cellular organisms → Archaea	1474	Open in IMG/M
3300025021\|Ga0210017_1192482	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	654	Open in IMG/M
3300025030\|Ga0209518_1012106	All Organisms → cellular organisms → Archaea	5308	Open in IMG/M
3300025073\|Ga0208245_1000225	All Organisms → cellular organisms → Archaea	53404	Open in IMG/M
3300025073\|Ga0208245_1000225	All Organisms → cellular organisms → Archaea	53404	Open in IMG/M
3300025073\|Ga0208245_1002468	All Organisms → cellular organisms → Archaea	9419	Open in IMG/M
3300025117\|Ga0208958_1002223	All Organisms → cellular organisms → Archaea	17157	Open in IMG/M
3300025117\|Ga0208958_1099407	All Organisms → cellular organisms → Archaea	865	Open in IMG/M
3300025121\|Ga0208375_1143462	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	673	Open in IMG/M
3300025150\|Ga0210057_1367689	Not Available	663	Open in IMG/M
3300025317\|Ga0209541_10000512	All Organisms → cellular organisms → Archaea	76119	Open in IMG/M
3300025317\|Ga0209541_10000588	All Organisms → cellular organisms → Archaea	71789	Open in IMG/M
3300025317\|Ga0209541_10001647	All Organisms → cellular organisms → Archaea	43935	Open in IMG/M
3300025317\|Ga0209541_10017219	All Organisms → cellular organisms → Archaea	10600	Open in IMG/M
3300025317\|Ga0209541_10023767	All Organisms → cellular organisms → Archaea	8441	Open in IMG/M
3300025317\|Ga0209541_10030881	All Organisms → cellular organisms → Archaea	6995	Open in IMG/M
3300025317\|Ga0209541_10074660	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	3661	Open in IMG/M
3300025317\|Ga0209541_10089492	All Organisms → cellular organisms → Archaea	3206	Open in IMG/M
3300025317\|Ga0209541_10094191	All Organisms → cellular organisms → Archaea	3088	Open in IMG/M
3300025317\|Ga0209541_10112991	All Organisms → cellular organisms → Archaea	2697	Open in IMG/M
3300025317\|Ga0209541_10604368	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	727	Open in IMG/M
3300025317\|Ga0209541_10644622	All Organisms → cellular organisms → Archaea	689	Open in IMG/M
3300025323\|Ga0209542_10330297	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1263	Open in IMG/M
3300025323\|Ga0209542_10828347	All Organisms → cellular organisms → Archaea	607	Open in IMG/M
3300027419\|Ga0209340_1052327	All Organisms → cellular organisms → Archaea	961	Open in IMG/M
3300027815\|Ga0209726_10000470	Not Available	75731	Open in IMG/M
3300027819\|Ga0209514_10004461	All Organisms → cellular organisms → Archaea	18799	Open in IMG/M
3300028028\|Ga0265292_1005086	All Organisms → cellular organisms → Archaea	7122	Open in IMG/M
3300028032\|Ga0265296_1075732	All Organisms → cellular organisms → Archaea	1371	Open in IMG/M
3300028167\|Ga0268285_1009844	All Organisms → cellular organisms → Archaea	3025	Open in IMG/M
3300028169\|Ga0268279_1142656	All Organisms → cellular organisms → Archaea	625	Open in IMG/M
3300028193\|Ga0265594_1024728	All Organisms → cellular organisms → Archaea	2558	Open in IMG/M
3300028193\|Ga0265594_1091481	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1070	Open in IMG/M
3300028298\|Ga0268280_1013141	All Organisms → cellular organisms → Archaea	2854	Open in IMG/M
3300028298\|Ga0268280_1013536	All Organisms → cellular organisms → Archaea	2794	Open in IMG/M
3300028299\|Ga0268276_1172074	All Organisms → cellular organisms → Archaea	668	Open in IMG/M
(restricted) 3300029268\|Ga0247842_10306681	All Organisms → cellular organisms → Archaea	849	Open in IMG/M
(restricted) 3300029286\|Ga0247841_10265383	All Organisms → cellular organisms → Archaea	1207	Open in IMG/M
3300029288\|Ga0265297_10487159	All Organisms → cellular organisms → Archaea	808	Open in IMG/M
3300030493\|Ga0310040_1104853	All Organisms → cellular organisms → Archaea	793	Open in IMG/M
3300031624\|Ga0315545_1173622	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	852	Open in IMG/M
3300031772\|Ga0315288_10353063	All Organisms → cellular organisms → Archaea	1511	Open in IMG/M
3300031772\|Ga0315288_10381939	All Organisms → cellular organisms → Archaea	1435	Open in IMG/M
3300031772\|Ga0315288_10843131	All Organisms → cellular organisms → Archaea	840	Open in IMG/M
3300031772\|Ga0315288_11169321	All Organisms → cellular organisms → Archaea	666	Open in IMG/M
3300032053\|Ga0315284_10103876	All Organisms → cellular organisms → Archaea	3795	Open in IMG/M
3300032053\|Ga0315284_10119172	All Organisms → cellular organisms → Archaea	3507	Open in IMG/M
3300032053\|Ga0315284_10620468	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1286	Open in IMG/M
3300032163\|Ga0315281_10185979	All Organisms → cellular organisms → Archaea	2326	Open in IMG/M
3300032397\|Ga0315287_10248956	All Organisms → cellular organisms → Archaea	2085	Open in IMG/M
3300032401\|Ga0315275_10527796	All Organisms → cellular organisms → Archaea	1322	Open in IMG/M
3300032516\|Ga0315273_11720272	All Organisms → cellular organisms → Archaea	759	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.34%
Engineered	Engineered	5.66%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	80.19%
Terrestrial	Environmental → Terrestrial	14.15%
Solid Waste	Engineered → Solid Waste	2.83%
Bioremediation	Engineered → Bioremediation	2.83%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	67.92%
Soil	Environmental → Terrestrial → Soil	14.15%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	8.49%
Unclassified	Environmental → Aquatic → Unclassified	2.83%
Landfill	Engineered → Solid Waste → Landfill	2.83%
Tetrachloroethylene And Derivatives	Engineered → Bioremediation → Tetrachloroethylene And Derivatives	2.83%
Marine	Environmental → Aquatic → Marine	0.94%

Habitat	Taxonomy	Distribution
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	39.62%
Lake	Environmental → Aquatic → Freshwater → Lake	21.70%
Loam	Environmental → Terrestrial → Soil → Loam	13.21%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	8.49%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	3.77%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	2.83%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	2.83%
Tetrachloroethylene	Engineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene	2.83%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.94%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	35.85%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	16.04%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	13.21%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	8.49%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	5.66%
Chlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated	3.77%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	3.77%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	2.83%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	2.83%
Unclassified	Engineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.94%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.94%

Habitat	Taxonomy	Distribution
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	30.19%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	16.04%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	13.21%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	6.60%
Groundwater	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated → Groundwater	3.77%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	3.77%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.83%
Beach Aquifer Porewater	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater	2.83%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	2.83%
Bioremediated Contaminated Groundwater	Engineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene → Unclassified → Bioremediated Contaminated Groundwater	2.83%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.89%
Anoxic Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water	1.89%
Contaminated Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Contaminated Groundwater	1.89%
Brackish Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Brackish Water	1.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.94%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.94%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.94%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.94%
Sinkhole	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Sinkhole	0.94%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	0.94%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001380	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m	Environmental	Open in IMG/M
3300002105	Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.1	Environmental	Open in IMG/M
3300002502	Soil microbial communities from Rifle, Colorado - Rifle CSP2_plank highO2_0.1	Environmental	Open in IMG/M
3300003358	Soil microbial communities from Rifle, Colorado - Rifle Oxygen_injection D1	Environmental	Open in IMG/M
3300004142	Groundwater microbial communities from aquifer - Crystal Geyser CG09_land_8/20/14_0.10	Environmental	Open in IMG/M
3300004210	Groundwater microbial communities from aquifer - Crystal Geyser CG10_big_fil_rev_8/21/14_0.10	Environmental	Open in IMG/M
3300004239	Groundwater microbial communities from aquifer - Crystal Geyser CG23_combo_of_CG06-09_8/20/14_all	Environmental	Open in IMG/M
3300005077	Water filled karst sinkhole microbial communities from Little Salt Spring, North Port, Florida - Phototrophic mat 2014	Environmental	Open in IMG/M
3300005323	Bioremediated contaminated groundwater from EPA Superfund site, New Mexico - Sample SAE3-23	Engineered	Open in IMG/M
3300005645	Brackish water microbial communities from Lake Sakinaw in Canada: eDNA_2 (120m)	Environmental	Open in IMG/M
3300009031	Microbial communities from groundwater in Rifle, Colorado, USA - 3D_0.1um	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009285	Microbial communities from groundwater in Rifle, Colorado, USA - 2A_0.1um	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009513	Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - F-1Y	Environmental	Open in IMG/M
3300009538	Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - H-2W	Environmental	Open in IMG/M
3300010302	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 325m metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300013127 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cm	Environmental	Open in IMG/M
3300013128 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 69cm	Environmental	Open in IMG/M
3300013129 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 10cm	Environmental	Open in IMG/M
3300013130 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2	Environmental	Open in IMG/M
3300014204	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 64-88 metaG	Engineered	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014613	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - MM_PW_MetaG	Environmental	Open in IMG/M
3300014656	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - MM_PC_MetaG	Environmental	Open in IMG/M
3300015370	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - OS_PC_MetaG	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300022556	Kivu_combined assembly	Environmental	Open in IMG/M
3300024995	Groundwater microbial communities from aquifer - Crystal Geyser CG09_land_8/20/14_0.10 (SPAdes)	Environmental	Open in IMG/M
3300025012	Soil microbial communities from Rifle, Colorado, USA - Groundwater C1	Environmental	Open in IMG/M
3300025015	Contaminated groundwater microbial communities from Rifle, Colorado, USA - Rifle Groundwater A1 (SPAdes)	Environmental	Open in IMG/M
3300025021	Groundwater microbial communities from aquifer - Crystal Geyser CG08_land_8/20/14_0.20 (SPAdes)	Environmental	Open in IMG/M
3300025030	Soil microbial communities from Rifle, Colorado, USA - Groundwater B1	Environmental	Open in IMG/M
3300025073	Soil microbial communities from Rifle, Colorado - Rifle Oxygen_injection C1 (SPAdes)	Environmental	Open in IMG/M
3300025117	Soil microbial communities from Rifle, Colorado - Rifle Oxygen_injection B1 (SPAdes)	Environmental	Open in IMG/M
3300025121	Soil microbial communities from Rifle, Colorado - Rifle Oxygen_injection D1 (SPAdes)	Environmental	Open in IMG/M
3300025150	Groundwater microbial communities from aquifer - Crystal Geyser CG10_big_fil_rev_8/21/14_0.10 (SPAdes)	Environmental	Open in IMG/M
3300025317	Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.1 (SPAdes)	Environmental	Open in IMG/M
3300025323	Soil microbial communities from Rifle, Colorado - Rifle CSP2_plank highO2_0.1 (SPAdes)	Environmental	Open in IMG/M
3300027419	Bioremediated contaminated groundwater from EPA Superfund site, New Mexico - Sample SAE3-23 (SPAdes)	Engineered	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027819	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)	Environmental	Open in IMG/M
3300028028	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 296A	Engineered	Open in IMG/M
3300028032	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #1	Environmental	Open in IMG/M
3300028167	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2013_06_06_120m	Environmental	Open in IMG/M
3300028169	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2010_1_5_80m	Environmental	Open in IMG/M
3300028193	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2011_5_24_80m	Environmental	Open in IMG/M
3300028298	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2011_5_24_40m	Environmental	Open in IMG/M
3300028299	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2010_1_5_45m	Environmental	Open in IMG/M
3300029268 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_19m	Environmental	Open in IMG/M
3300029286 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_18m	Environmental	Open in IMG/M
3300029288	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 137-91	Engineered	Open in IMG/M
3300030493	Bioremediated contaminated groundwater from EPA Superfund site, New Mexico - Sample HSE6-23 (v2)	Engineered	Open in IMG/M
3300031624	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-10	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1356J14229_1000013988	3300001380	Groundwater	MESKERPKWPLHRLKSMYFAMHCWKCKKFELPIEKYKRLCENNIQKMIDNLEVKEMKFKEFNTIIKNSIFCKFEKRDFSNNCPICKKLGCR*
JGI1356J14229_100109387	3300001380	Groundwater	LGFRKQGLVKLGVNMEKEKPKWTLQRLKSMYFAMHCWKCKKWEISPEEYKKECEDNIQKIIDNLEIKEMTFKDFNKIIKNTTFCKFEKRDFSNNCPICKNLGISNHF*
C687J26635_1000472512	3300002105	Groundwater	MIEKEKPKWPLQRLKGMYFAMHCWKCKKFELPMEEYKQKCENNIQKIIDNLEIKEMKFKEFNEIIKNSTFCKFEKREFNNKCPICKKLRIKF*
C687J26635_100733724	3300002105	Groundwater	MYFAMHCWKCKKFELPVEEYKKMCEDNIQKIIDGLEVREMKFKEFNNIIKNSLFCTFEKRDFSNDCSICKKFGVHGRL*
C687J26635_100898733	3300002105	Groundwater	RLKGMYFAVHCWKCKRFELPMEEYKQRCENNIQKIIDSLEIKEMKFKEFNEIIKNSTFCKFEKREFNNKCPICKKLGIKF*
C687J26635_100996884	3300002105	Groundwater	MDNKEERPKWPLRRLKSMYFAMHCWKCKKFELSVEEYKQSCEENIQKIIDGLDIKEMEFREFNEIIKHSTFCKFEKRGFNNNCLICKKLGI*
C687J26635_101310691	3300002105	Groundwater	KKERPKWPLQRLKSMYFAIHCWTCKNFELPMEEYKRRCEENIQKIIDNIGIKEMKFKEFNNIVKSSTFCQFEKRNFSNNCPI*
C687J26635_103061741	3300002105	Groundwater	MNNQKERLKWPLQRLKGMYFAMHCWKCKKFELPMEEYKQRCENNIQKIIDSLEIKEMKFKEFNDIIKSXTFCKFDKRDFSNNCPICKKLGISRRGL*
C687J35174_100242533	3300002502	Soil	LGFRKQGLVKLGAKLGVNMEKEKPKWPFQRLKSMYFAMHCWKCRKCEDSPERYKQKCEDNIQKIIDNLEIKEMTFKEFNNIIKNTSFCKFEKRDFSNNCPICKNLGISNHF*
C687J35174_104435182	3300002502	Soil	MEKEKPKWPLQRLKSMYFAMHCWKCKKFELPVEEYKKMCEDNIQKIIDGLEVREMKFKEFNNIIKNSLFCTFEKRDFSNDCSICKKFGVHGRL*
C687J35174_104780112	3300002502	Soil	QRLKSMYFAIHCWTCKNFELPMEEYKRRCEENIQKIIDNIGIKEMKFKEFNNIVKSSTFCQFEKRNFSNNCPI*
C687J50192_100015729	3300003358	Soil	MINEKERPKWPMQRLKGMYFAMHCWKCKKFELPQEEFEQTEYEKSCEPNIQKIIHRLDLKEMRFKDFNIIIKNSVFCKFEKRDFSNNCPICKKFGVPNHF*
C687J50192_100015735	3300003358	Soil	MEKAYKKERPKWPMQRLKGMYFAMHCWKCKKFELPEEEFEPTEYKLKCEKNIQRIIDILDVKEMKFKDFNNIIKNSEFCRFEKRDFSNNYPICKKFGITNHL*
C687J50192_10038661	3300003358	Soil	MEKERPKGPLKRLKSMYFALHCWKCKKFELPMEEYKKLCEDNIQKIIDALEIKEMRFREFNNIIKNTNFCKFEKRDFSSCPICEKCGIPQKRFW*
Ga0066638_10094264	3300004142	Groundwater	MIKKERPKWPLQRLKGMYFAMHCWKCKKFELPVEEYKKGCEENIQKIIDNLGIKEMKFKEFNEIIKNSTFCKFEKRELEKRFKQVKETFAGNDKD
Ga0066638_10128973	3300004142	Groundwater	MDNKKERPKWPLQRLKSMYFAMHCWKCKKFELPVEEYKKRCEENIQKIINNLEIKEMKFKEFNEIIKNSTFCKFERREFNNNCPICKELRVPRLVD*
Ga0066639_102412263	3300004210	Groundwater	MNNQKERLKWPLQRLKGMYFAMHCWKCKKFELPMEEYKQRCENNIQKIIDSLEIKEMKFKEFNDIIKSTTFCKFDKRGFSNNCPICKKLGISRRGL*
Ga0066639_103283462	3300004210	Groundwater	MEQKERLKWPLKRLKGMYFAMHCWKCKIWENSIEGYKKRCEDNIQKIIDNIKVKEMKFKDFNKIIKNSTFCQFEKRDFSDNCPICKKWGISRR*
Ga0066639_105204572	3300004210	Groundwater	MEKEKPKWPLQRLKGMYFAMHCWKCKKFELPMEEYKARCEDNIQRIIDNLNIKEMTFRGFNNIIKNSTFCEFEKRECFRKNN*
Ga0066650_102699121	3300004239	Groundwater	MEKERPKWPLQRLKSMYFAMHCWKCKKWEISPQKYKKECEDNIQKIINSLEIKEMRFNEFNNIIKNTTFCKFEKRDFSNNCSICKKLGISRGKI*
Ga0071116_10521914	3300005077	Sinkhole	MVRKERPKWPLKRLKSMYFATHCWKCKKFELPREEYEVKCENNIQKIIDNLKIKEMKFKEFNDIIRSSTFCKFEKRDFSNNCPICKKFGIKF*
Ga0074198_10268152	3300005323	Bioremediated Contaminated Groundwater	MEKEKPKWLLQRLKSMYFAVHCWKCKKFELPVEEYKKICEDNIQKIIDNLEIKEMKFREFNEIIKNSTFCKFEKRDFSNNCPICRKFGIWG*
Ga0077109_10456653	3300005645	Brackish Water	MLNKEKPKWPMQRLKSMYFAMHCWKCKKFELPREEYEKRCEENIQKIIDNIEIKEMKFREFNNLIKSTLFCEFEKRDLKDNCLICKRLGCKRRI*
Ga0077109_10501883	3300005645	Brackish Water	MIKKERPKWPLQRLKSMYFAMHCWKCKKFELSREEYEKRCVKKIQKIIDSLKIKEMKFKEFNRIIKNSIFCKFEKRDFSNNCPICKKFGIKSWRV*
Ga0103682_100303855	3300009031	Groundwater	MINEKERPKWPMKRLKGMYFAMHCWKCKKFELPMEEYQKLCENNIQKIIDNLEIKEMKFKDFNNIIKNSEFCKFEKRDFSNDCPICKKFGIPSKPF*
Ga0105099_101095394	3300009082	Freshwater Sediment	LGFRKQGLVKLDVKLGAKLGVNMEKEKPKWQLKRLKSMYFAMHCWKCRKCEDSPEKYKQECEDNIQKIIDNLEIKEMTFKEFNRIIKNTTFCKFEKRDFSNNCPICKNLGISNHF*
Ga0103680_100709593	3300009285	Groundwater	MIEEEKPKWSLQRLKGMYFAVHCWKCKRFELPMEEYKQRCENNIQKIIDSLEIKEMKFKEFNEIIKNSTFCKFEKREFNNKCPICKKLGIKF*
Ga0103680_102115872	3300009285	Groundwater	MEDKKERPKWLLQRLKSMYFAMHCWKCKKFELPVEEYKQICEDNIQKIIDNLEVKEMTFKDLNNTIKNTSFCKFEKRDFSNSCPIKLRLKPEGFCD*
Ga0103680_104199002	3300009285	Groundwater	MKKERPKWPLQRLKGMYFAMHCWKCKKFELPMEEYKIRCENNIQKIIDDLNVKEMKFKEFNEIIKNSTFCEFEKRDFSNNCPICKKLDVITTDFN*
Ga0114951_100765513	3300009502	Freshwater	MVPLTKKEKPKWPLKRLKSMYFAVCCWKCKKFELPREKYKQECEDNIQKIIDNMEIKEMTFKEFNSIIRNSLFCKFEKRDFSNNCPICRKLGVPQNYPQ*
Ga0129285_105887102	3300009513	Beach Aquifer Porewater	MVDDKKEKPKWPLQRLKGMYFAMHCWKCKKFELPMGEYKKKCEENIQKIINNSKIKEIRFREFNSIIKNSVFCRFEKRNFSNNCPIC
Ga0129287_100188657	3300009538	Beach Aquifer Porewater	MEKEKPKWPLRRLKSMYFVVYCWKCKKFELPVEEYKQECEDNIQKIIDSLEIKEMTFKEFNRIIKNSTFCKFEKRYFSNNCPVCKKFGISSSF*
Ga0129287_103315021	3300009538	Beach Aquifer Porewater	MNNQKERPKWPLQRLKGMYFAMHCWKCKKFELSMEEYKQRCEDNIQKIIDSLEIKEMKFKDFNDIIKNSTFCKFDKRDFSNNCPICKKLGISRRGL*
Ga0116202_103876302	3300010302	Anoxic Lake Water	MEKERPKWPLHRLRGMYFAMHCWKCKKFELPDEESEQTEYKKTCEGNIQKIIDNLNVKEMKFKDFNNIIKNTEFCRFDKRDFSNNCSICKALRISRKF*
Ga0153915_100045242	3300012931	Freshwater Wetlands	MYFAVHCWKCKKFELPVERYKQKCEENIQKIIDNLEIKEMKFKEFNGIIKNSTFCKFEKRDFNDDCPICKKLGISRRGI*
(restricted) Ga0172365_1000442113	3300013127	Sediment	MIKKERPKWLLQRLKGMYFAMHCWKCKKFELPMDEYKQKCEGNIQKIIDNLEIKEMKFKEFNEIIKNSTFCKFEKRDFNNNCPICKKFGV*
(restricted) Ga0172366_100148751	3300013128	Sediment	NLRNMIKKERPKWLLQRLKGMYFAMHCWKCKKFELPMDEYKQKCEGNIQKIIDNLEIKEMKFKEFNEIIKNSTFCKFEKRDFNNNCPICKKFGV*
(restricted) Ga0172366_107541311	3300013128	Sediment	CWKCKKFELPEDEFEETEYQKICEKSIQKIMENLEIKEMKFKEFNNIIKNTTFCKFEKREFKECPICKRLGIPQWKI*
(restricted) Ga0172364_100353546	3300013129	Sediment	MESETKKERPKWPLKRLKGMYFAMHCWKCKKFELPEDEFEETEYQKICEKSIQKIMENLEIKEMKFKEFNNIIKNTTFCKFEKREFKECPICKRLGIPQWK
(restricted) Ga0172363_102902771	3300013130	Sediment	KERPKWPLKRLKGMYFAMHCWKCKKFELPEDEFEETEYQKICEKSIQKIMENLEIKEMKFKEFNNIIKNTTFCKFEKREFKECPICKRLGIPQWKI*
(restricted) Ga0172363_106689791	3300013130	Sediment	MYFAIHCWRCKRFELPVEEYKQRCEENIQKIIDCLDVREMKFKEFNEIIKNSTFCKFEKREFKNNCVICKKLGMY*
Ga0172381_102624863	3300014204	Landfill Leachate	MFIHNKNMEKERPKWPLKRLKSMYFAMHCWKCKKFELPMEEYKQKCEDNIQKIIDSLEIKEMKFKEFNNIIKDSTFCKFEPRDFNNNCPICKKLG*
Ga0182011_109382831	3300014496	Fen	MANQNKERPKWPLKRLKSMYFAMHCWKCKKWERSIERYQKECEDNIQKIIDNLEVKEMKFKDFNSIIKNSLFCKFEKRDFSNNCPICKKFGITNRL*
Ga0180008_10218274	3300014613	Groundwater	MVRDEKERPKWPLQRLKSMYFAMHCWKCRKFELPMEEYKEKCENNIQKIIDNLEIKEMKFKEFNSIIKNSEFCKFEKRDFKNNCPLCRKFGVPQWKF*
Ga0180008_10949993	3300014613	Groundwater	NNMIKKEKPKWPLQRLKGMYFALHCWKCKKFELSIEEYQKRCEQGIQKIIDNLEIKEMRFREFNNIIKCSNFCKFEKRDFSNNCPTCNKLGINL*
Ga0180007_1000574218	3300014656	Groundwater	MIKKEKPKWPLQRLKGMYFALHCWKCKKFELSIEEYQKRCEQGIQKIIDNLEIKEMRFREFNNIIKCSNFCKFEKRDFSNNCPTCNKLGINL*
Ga0180007_102984522	3300014656	Groundwater	MDNKERPKWPLQRLKSMYFAMHCWKCKKFELPVEEYKQKCEDSIQKIIDGLEIKEMKFKEFNNIIKNCTFCKFEKREFSNNCPICKKLEISRRW*
Ga0180009_100525252	3300015370	Groundwater	MIKKERLKWPLQRLKGMYFAMHCWKCKKFELPKEEYERRCEENIQKIIGRLKTKEMKFKEFNEIIKNSVFCKFEKREFDDNCPICKKLGSLR*
Ga0212088_103162232	3300022555	Freshwater Lake Hypolimnion	MVPLTKKEKPKWPLKRLKSMYFAVCCWKCKKFELPREKYKQECEDNIQKIIDNMEIKEMTFKEFNSIIRNSLFCKFEKRDFSNNCPICRKLGVPQNYPQ
Ga0212121_101193144	3300022556	Anoxic Lake Water	MEKERPKWPLHRLRGMYFAMHCWKCKKFELPDEESEQTEYKKTCEGNIQKIIDNLNVKEMKFKDFNNIIKNTEFCRFDKRDFSNNCSICKALRISRKF
Ga0210018_10307574	3300024995	Groundwater	MDNKKERPKWPLQRLKSMYFAMHCWKCKKFELPVEEYKKRCEENIQKIINNLEIKEMKFKEFNEIIKNSTFCKFERREFNNNCPICKELRVPRLVD
Ga0209727_10080104	3300025012	Soil	MKKERPKWPLQRLKGMYFAMHCWKCKKFELPMEEYKIRCENNIQKIIDDLNVKEMKFKEFNEIIKNSTFCEFEKRDFSNNCPICKKLDVITTDFN
Ga0209727_10787712	3300025012	Soil	MIEEEKPKWSLQRLKGMYFAVHCWKCKRFELPMEEYKQRCENNIQKIIDSLEIKEMKFKEFNDIIKGATFCKFDKRDFSNNCPICKKLGIKF
Ga0209210_10069361	3300025015	Contaminated Groundwater	MEKERPKGPLKRLKSMYFALHCWKCKKFELPMEEYKKLCEDNIQKIIDALEIKEMRFREFNNIIKNTNFCKFEKRDFSSCPICEKCGI
Ga0209210_10454832	3300025015	Contaminated Groundwater	MEDKKERPKWLLQRLKSMYFAMHCWKCKKFELPVEEYKQICEDNIQKIIDNLEVKEMTFKDLNNTIKNTSFCKFEKRDFSNSCPIKLRLKPEGFCD
Ga0210017_11924822	3300025021	Groundwater	MDNKKERPKWPLQRLKSMYFAMHCWKCKKFELPVEEYKKRCEENIQKIINNLEIKEMKFKEFNEIIKNSTFCKFERREFNNNCPICKELRVPRLV
Ga0209518_10121068	3300025030	Soil	MEKERPKGPLKRLKSMYFALHCWKCKKFELPMEEYKKLCEDNIQKIIDALEIKEMRFREFNNIIKNTNFCKFEKRDFSSCPICEKCGIPQKRFW
Ga0208245_100022555	3300025073	Soil	MINEKERPKWPMQRLKGMYFAMHCWKCKKFELPQEEFEQTEYEKSCEPNIQKIIHRLDLKEMRFKDFNIIIKNSVFCKFEKRDFSNNCPICKKFGVPNHF
Ga0208245_100022561	3300025073	Soil	MEKAYKKERPKWPMQRLKGMYFAMHCWKCKKFELPEEEFEPTEYKLKCEKNIQRIIDILDVKEMKFKDFNNIIKNSEFCRFEKRDFSNNYPICKKFGITNHL
Ga0208245_10024681	3300025073	Soil	MINEKERPKWPMKRLKGMYFAMHCWKCKKFELPMEEYQKLCENNIQKIIDNLEIKEMKFKDFNNIIKNSEFCKFEKRDFSNDCPICKKFGIPSKPF
Ga0208958_100222335	3300025117	Soil	WPLQRLKGMYFAMHCWKCKKFELPMEEYKIRCENNIQKIIDDLNVKEMKFKEFNEIIKNSTFCEFEKRDFSNNCPICKKLDVITTDFN
Ga0208958_10994073	3300025117	Soil	NIMEDKKERPKWLLQRLKSMYFAMHCWKCKKFELPVEEYKQICEDNIQKIIDNLEVKEMTFKDLNNTIKNTSFCKFEKRDFSNSCPIKLRLKPEGFCD
Ga0208375_11434621	3300025121	Soil	MNNQKERLKWPLQRLKGMYFAMHCWKCKKFELPMEEYKQRCENNIQKIIDSLEIKEMKFKEFNDIIKSTTFCKFDKRDFSNNCPICKKLG
Ga0210057_13676892	3300025150	Groundwater	MEKEKPKWPLQRLKGMYFAMHCWKCKKFELPMEEYKARCEDNIQRIIDNLNIKEMTFRGFNNIIKNSTFCEFEKRECFRKNN
Ga0209541_1000051254	3300025317	Groundwater	MDNKEERPKWPLRRLKSMYFAMHCWKCKKFELSVEEYKQSCEENIQKIIDGLDIKEMEFREFNEIIKHSTFCKFEKRGFNNNCLICKKLGI
Ga0209541_1000058817	3300025317	Groundwater	MEKEKPKWPLQRLKSMYFAMHCWKCKKFELPVEEYKKMCEDNIQKIIDGLEVREMKFKEFNNIIKNSLFCTFEKRDFSNDCSICKKFGVHGRL
Ga0209541_1000164750	3300025317	Groundwater	MIEKEKPKWPLQRLKGMYFAMHCWKCKKFELPMEEYKQKCENNIQKIIDNLEIKEMKFKEFNEIIKNSTFCKFEKREFNNKCPICKKLRIKF
Ga0209541_100172199	3300025317	Groundwater	MEKEKPKWPFQRLKSMYFAMHCWKCRKCEDSPERYKQKCEDNIQKIIDNLEIKEMTFKEFNNIIKNTSFCKFEKRDFSNNCPICKNLGISNHF
Ga0209541_1002376716	3300025317	Groundwater	MNNQKERLKWPLQRLKGMYFAMHCWKCKKFELPMEEYKQRCENNIQKIIDSLEIKEMKFKEFNDIIKSATFCKFDKRDFSNNCPICKKLGISRRGL
Ga0209541_100308815	3300025317	Groundwater	MIEEEKPKWSLQRLKGMYFAVHCWKCKRFELPMEEYKQRCENNIQKIIDSLEIKEMKFKEFNEIIKNSTFCKFEKREFNNKCPICKKLGIKF
Ga0209541_100746602	3300025317	Groundwater	MENKKERLKWSLKRLKGMYFAMHCWKCKKFELPMREYQKRCEENIQKIINNMEIKEMKFKDFNNIIKNTTFCKFEKRDFSNNCPICKKFGIKG
Ga0209541_100894922	3300025317	Groundwater	MDDKKERPKWPLQRLKSMYFAIHCWTCKNFELPMEEYKRRCEENIQKIIDNIGIKEMKFKEFNNIVKSSTFCQFEKRNFSNNCPI
Ga0209541_100941914	3300025317	Groundwater	MNNQKERPKWFLQSLKVMYFAMHCWKCKKFELPKEEYKQRCEDNIQKIIDDLEIKEMEFKKFNEIIKNTTFCKFDKRDFSNSCPICKKLGISRRGL
Ga0209541_101129913	3300025317	Groundwater	MEQKERPKWLLKRLKSMYFAMHCWKCKIWGNSIEEYNKRCENNIQKIIDNLDVKEMKFKEFNNIIKNSIFCQFEKKDFSNNCPICKAWGISGR
Ga0209541_106043682	3300025317	Groundwater	MIKKERLKWPLQRLKRMYFAMHCWKCKKFELSMEEYKKRCEENIQKIIDILNIKEMEFREFNEIIKNSTFCKFEKRDFSNDCPICKKFGINYKF
Ga0209541_106446221	3300025317	Groundwater	MNGQIVNVGENNMTEKERPKWPLKRLKGMYFAMHCWKCKKFELPMEEYKRRCEDSIQKMIDNMEIKEMKFKEFNDIIKNRLFCEFEKRDFSNNCPICKKFGGLGGVRH
Ga0209542_103302972	3300025323	Soil	MNNQKERPKWPLQRLKGMYFAMHCWKCRKFELPMEEYKQRCEDNIQKIIDSLEIKEMKFKEFNDIIKGATFCKFDKRDFSNNCPICKKFGIKSWSC
Ga0209542_108283471	3300025323	Soil	MDSKKERPKWPLHRLKGMYFAMHCWKCKKFELPMEEYKKRCEENIQKIIDNLEIKEMKFKEFNTIIKNSAFCTFEKREFSNNCPICKKL
Ga0209340_10523272	3300027419	Bioremediated Contaminated Groundwater	MEKEKPKWLLQRLKSMYFAVHCWKCKKFELPVEEYKKICEDNIQKIIDNLEIKEMKFREFNEIIKNSTFCKFEKRDFSNNCPICRKFGIWG
Ga0209726_1000047089	3300027815	Groundwater	MESKERPKWPLHRLKSMYFAMHCWKCKKFELPIEKYKRLCENNIQKMIDNLEVKEMKFKEFNTIIKNSIFCKFEKRDFSNNCPICKKLGCR
Ga0209514_1000446122	3300027819	Groundwater	MEKEKPKWTLQRLKSMYFAMHCWKCKKWEISPEEYKKECEDNIQKIIDNLEIKEMTFKDFNKIIKNTTFCKFEKRDFSNNCPICKNLGISNHF
Ga0265292_100508610	3300028028	Landfill Leachate	MHNIMNDKKERPKWPLQRLKGMYFAMHCWKCKKFELPMEDYKQRCEENIQKIIDNLEIKEMKFKEFNIIIKNSTFCKFEKRDFRNDCPICKKFGIFNYP
Ga0265296_10757324	3300028032	Groundwater	MINKEKPKWPLSRLKGMYFAMHCWKCKKFELPVEEYEKRCEENIQKIINSLEIKEMKFKQFNQIIKNSTFCKFEKRDFNNNCPICKKLGT
Ga0268285_10098443	3300028167	Saline Water	MLNKEKPKWPMQRLKSMYFAMHCWKCKKFELPREEYEKRCEENIQKIIDNIEIKEMKFREFNNLIKSTLFCEFEKRDLKDNCLICKRLGCKRRI
Ga0268279_11426561	3300028169	Saline Water	MLRVIMDNTKEKPKWPLKRLARMYFGMYYWKCKKFELSQQEYEKRCEKNIQKIIGNLEIKDMTFKEFNNIIKNSIFCEFEKREGLNF
Ga0265594_10247284	3300028193	Saline Water	MIKKERPKWPLQRLKSMYFAMHCWKCKKFELSREEYEKRCVKKIQKIIDSLKIKEMKFKEFNRIIKNSIFCKFEKRDFSNNCPICKKFGIKSWRV
Ga0265594_10914812	3300028193	Saline Water	MQRLKSMYFAMHCWKCKKFELPREEYEKRCEENIQKIIDNIEIKEMKFREFNNLIKSTLFCEFEKRDLKDNCLICKRLGCKRRI
Ga0268280_10131415	3300028298	Saline Water	MEVQKERPKWPLKRLKGMYFAMRCWKCKKFELPMEEYKRRCEENIQKIIDNLEVKEMKFKEFNAIIKNTTFCKFEKRDFNNDCPICKKLGVPRYRV
Ga0268280_10135362	3300028298	Saline Water	LDSREHSLLIEMEKERPKWPLKRLKSMYFAMHCWKCKKCEDSPEKYKQECEENIQKIIDSLEVKEMTFQDFNNIIKNSTFCKFEKRQI
Ga0268276_11720741	3300028299	Saline Water	MKKEIKKWSLQRLKSMYFAMHCWKCKKFELSKEEYKQRCENNIQKVIDSLGIKEMTFNEFNDIIKNTIFCKFERRDFSNNCPICKKLGISMSKI
(restricted) Ga0247842_103066812	3300029268	Freshwater	MVNDKKERPKWPMHRLKGMYFAMHCWKCKKFELPEDDSEEIEYKQKCEPSIQKIIDNLEVKEMKFKEFNYIIKNSNFCKFEKREFDNNCPICKRFGIPRLKI
(restricted) Ga0247841_102653831	3300029286	Freshwater	MVNDNKERLKWPMKRLKGMYFAMHCWKCKKFELPEEEFEQTEYEKNCELNIQKIIEGLDVKEMKFKDFNNIIKNSEFCKFEKRDFSNDCPICKKLGIKNNL
Ga0265297_104871592	3300029288	Landfill Leachate	MAEKERPKWPLWRLKKMYFGMHCWKCKKFELPTEEYKKKCEDNIQKIIDSLEIPEMRFKQFNRIIKNSTFCQFEKRDFRDDCPICKRFGCSRRVN
Ga0310040_11048533	3300030493	Bioremediated Contaminated Groundwater	WLLQRLKSMYFAVHCWKCKKFELPVEEYKKICEDNIQKIIDNLEIKEMKFREFNEIIKNSTFCKFEKRDFSNNCPICRKFGIWG
Ga0315545_11736223	3300031624	Salt Marsh Sediment	MEKERPKWPLQRLKSMYFALHCWKCKKFELPAEEFEETEYEKKCEKNIQKIIDNLEIKEMKFRDFNTIIKNSTFCNFEK
Ga0315288_103530633	3300031772	Sediment	PKWPLQRLKGMYFAMHCWKCKKFELSMEEYKKRCEENIQKIIDNLEIKEMKFKEFNNIIKNSTFCKFEMREFNDTCPICKKWGIPQKRF
Ga0315288_103819393	3300031772	Sediment	MNNQKERLKWPLQRLKGMYFAMHCWKCKKFELPMEEYKQRCENNIQKIIDSLEIKEMKFKEFNDIIKRATFCKFNKRDFSNNCLICKKLGISRRGL
Ga0315288_108431312	3300031772	Sediment	MNDKKERLKWPLQRLKGMYFAMHCWKCKKFELPMEEYKQRCEENIQKIIDNLEIKEMNFKEFNNIIKNSTFCKFEKREFNNNCPICKKFGISKHF
Ga0315288_111693213	3300031772	Sediment	MEEEKERPKWPLKRLGRMYFAMHCWKCKKFELPPEEYKKRCEENIQGIIDGLEIKEMKFKEFNAIIKNTTFCKFEKRDFDNDCPICKKLGVPKWRI
Ga0315284_101038764	3300032053	Sediment	MIEIINGKKERPKWPLQRLKSMYFAIHCWKCKKFELPVKEYKKLCEDNIQKIIDSLEIKEMKFKEFNDIIKNSTFCKFEKRDFSNNCPVCKKFGISRIL
Ga0315284_101191722	3300032053	Sediment	MEKERPKWPLQRLKGMYFAMHCWKCKKFELSMEEYKKRCEENIQKIIDNLEIKEMKFKEFNNIIKNSTFCKFEMREFNDTCPICKKWGIPQKRF
Ga0315284_106204682	3300032053	Sediment	MIKKERPKWPLRRLKGMYFAMHCWKCKKFELPEKEYKRRCEENIQKIIDNLEIKEMKFKEFNGIIKNSAFCKFERRDFSNNCPLCKILGSNY
Ga0315281_101859794	3300032163	Sediment	MEQKERPKWPLKRLKSMYFAMHCWKCKIWENSIEGYKKRCEDNIQKIIDNLDVKEMKFKEFNNIIKNSIFCQFEKRDFSNNCPICKAWGISGR
Ga0315287_102489562	3300032397	Sediment	LVKIIKLGVKLGAKLGVNIEKEKPKWPLQRLKSMYFAMHCWKCKKWEISHEKYKKECEDNIQKIIDNLEIKEMTFKDLNKIIKNTTFCKFEKRDFSNNCPICKKLGISNRL
Ga0315275_105277962	3300032401	Sediment	MLWKVKDNISEMKKERPKWPLQRLKGMYFAIHCWKCKKFELSTEEYKKRCEENIQKIIDNLEVEEMKFKEFNDIIKNSTFCTFEKREFNNNCPICKKWGIPQKRF
Ga0315273_117202722	3300032516	Sediment	MEKERPKWHLQRLKNMYFAMHCWKCKKFELSMEEYKKRCEDNLQKIIDNLEVKEMTFKKFNSIIKNSMFCKFEMRNFSNNCPLCKKLGISNNF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters