Basic Information | |
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Family ID | F082826 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 113 |
Average Sequence Length | 56 residues |
Representative Sequence | MRKYTIQMNYNASIIVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILRTD |
Number of Associated Samples | 46 |
Number of Associated Scaffolds | 113 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 8.33 % |
% of genes near scaffold ends (potentially truncated) | 16.81 % |
% of genes from short scaffolds (< 2000 bps) | 65.49 % |
Associated GOLD sequencing projects | 40 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.48 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (70.796 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen (73.451 % of family members) |
Environment Ontology (ENVO) | Unclassified (100.000 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Animal → Animal proximal gut (50.442 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 16.67% β-sheet: 25.00% Coil/Unstructured: 58.33% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.48 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Human Human Oral Cavity Elk Feces Fecal Rumen Cattle And Sheep Rumen Bovine Rumen Sheep Rumen Camel Rumen Pig Ears Skin |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
_HiSeq_24711130 | 2061766007 | Bovine Rumen | MVKFRIRCNFNASYEVEVMANDEGEALEKATNMAEDADNREFVIYGQGESQIIAREDIY |
RmDRAFT_0166054 | 3300000064 | Bovine Rumen | MANKYTIEFNYNASIVVDVEGEFHDEGEALDKAREIAEDADINEFTIGEERESKILNVR* |
DRAFT_106934781 | 3300002597 | Camel Rumen | MARKYTIQLNYNASIIVEVTGNDEGEALENARNYAEDADIREFTIGNERESQILRQG* |
DRAFT_102867102 | 3300003523 | Camel Rumen | MNYNASIVVEVIAKDEGEALDKARDKAEDADIRQFTLGSENESKILRTE* |
Ga0099352_100187213 | 3300006256 | Human | MSKYTIKFNYKASIVIEVEGDFRHEGDALDKAREIAEDADIEEFNIGEEMESKILNVE* |
Ga0102700_10171394 | 3300007125 | Human | MSKYTIKFNYKASITIEVEGDFRHEGDALDKAREIAEDADIEEFNIGEEMESKILNVE* |
Ga0133741_1017382 | 3300009965 | Human Oral Cavity | MSKYTIKFNYKASIVIEVEGDFRHEGDALDKAREIAEDADIEEFNIGKEMESKILNVE* |
Ga0120387_100066019 | 3300012016 | Sheep Rumen | MNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILRAD* |
Ga0123351_13054742 | 3300012973 | Fecal | MKYTVELNYNASIVVTVEADNEGEALDKARDIAEESDIEQFTITNERESQILATN* |
Ga0123348_102440223 | 3300012979 | Fecal | MKYTVELNYNASIVITVEANDEGEALDKARNIAEESDIEQFTITNERESQILSTN* |
Ga0123348_108030061 | 3300012979 | Fecal | MMKKYTVQLNYKASIIVDVEVENSPNAEGDALEKARNVAEDADIREFTIGNELESQILRQG* |
Ga0123349_1000118525 | 3300012983 | Fecal | MARKYTVQLNYNASIIVETTGNDEGEALENARNIAEDADIREFTIGNERESQILRQG* |
Ga0123349_100316413 | 3300012983 | Fecal | MGKKYTIQLNYNASIIVDVEVENTPNAEGDALEKARNIAEDADIREFTIGSERESQILRQG* |
Ga0123349_113233711 | 3300012983 | Fecal | MERYTIQLNYNAAITVTVVAENEGQALDMARDKAEDADVSQYTIWGERESTIINRERV* |
Ga0157150_10037633 | 3300012992 | Pig Ears Skin | MARYKVECNYNASIIANVEANDEGEALDKARDYAEDANIRQFTIGSERESRILRTE* |
Ga0157150_10082152 | 3300012992 | Pig Ears Skin | MRYKIQCNYNAFITVDVEANDEGEALDKARNYAEDADIRQFNIGEEKESRILETE* |
Ga0157150_10614262 | 3300012992 | Pig Ears Skin | TIQMNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILRAD* |
Ga0157150_10701971 | 3300012992 | Pig Ears Skin | MKRYTIEFNYNASIVVNVEGDFNDEGEALDKAREIAEDADINEFTIGEEKESKILNLS* |
Ga0120377_10167921 | 3300013830 | Sheep Rumen | MANKYTIEFNYNASIVVDVEGEFHDEGEALDKAREIAEDADINEFTIGEERESKILNVR |
Ga0120384_100087520 | 3300014057 | Sheep Rumen | MQKYVIEMNYNASIVVEVEANDEGEALDKARDKAEDADIRQFTLGKENESKILRRD* |
Ga0120366_1003871 | 3300014083 | Fecal | MSRYTIELNYNASISFEVEADNEGDALDKARDQAEEADIREFAIGHENESRVLRER* |
Ga0223824_106735061 | 3300021254 | Cattle And Sheep Rumen | MARKYTIQLNYNASIIVEVTGNDEGEALENARNYAEDADIREFTIGNERESQILRQG |
Ga0223825_124151795 | 3300021255 | Cattle And Sheep Rumen | MHKYTIQMNYNASIVVEVTASDEGEALDKARDKAEDADIRQFTLGSENESKILRTE |
Ga0223825_1294175129 | 3300021255 | Cattle And Sheep Rumen | MHKYTIQMNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILRTD |
Ga0223826_10000018191 | 3300021256 | Cattle And Sheep Rumen | MQKYVIELNYNASIVIEVEANDEGEALDKARDQAEDADIRQFTLGKENESKILRRD |
Ga0224415_10000019268 | 3300021399 | Cattle And Sheep Rumen | MHKYTIQMNYNASIVVEVNASDEGEALDKARDKAEDADIRQFTLGSENESKILRTE |
Ga0224482_111774702 | 3300021426 | Cattle And Sheep Rumen | MQKYVIEMNYNASIVIEVEANDEGEALDKARDKAEDADIRQFTLGKENESRILRRD |
Ga0255060_105464462 | 3300024337 | Rumen | NMKFTIQMNYNASYIAEVYANDGGEALDKAREMAEDADIRQFTIASENEAKILNRE |
Ga0255061_101452653 | 3300024342 | Rumen | MRKYTIQMNYNASIIVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILRTD |
Ga0255061_106609692 | 3300024342 | Rumen | MQKYVIEMNYNASIIIEVEANDEGEALDKARDKAEDADIRQFTLGKENESKILRRD |
Ga0255061_107745592 | 3300024342 | Rumen | MHKYTIQMNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSEN |
Ga0255062_104091292 | 3300024345 | Rumen | MRKYTIQLNYNASIIVDVTGNDEGEALDNARNLAEDADIKEFTICGERESQILRQE |
Ga0255062_105432792 | 3300024345 | Rumen | MNKYTIQMNYNASIVVEVIAKDEGEALDKARDKAEDADIRQFTLGSENESKILRTE |
Ga0255062_105760972 | 3300024345 | Rumen | MHKYTIQMNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILRAD |
Ga0255059_1000056518 | 3300024486 | Rumen | MHRYTIQMNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILRTD |
Ga0255059_101440472 | 3300024486 | Rumen | MMKKYTIQLNYNASIIVDVEVENTPNAEGEALEKARNIAEDADIREFTIGGERESQILRQ |
Ga0255059_104190912 | 3300024486 | Rumen | MQKYVIEMNYNASIVVEVEANDEGEALDKARDKAEDADIRQFTLGKENE |
Ga0255059_104756882 | 3300024486 | Rumen | MARKYTIQLNYNASIIVDVTGNDEGEALENARNIAEDADIKEFTIGAERESQILRQS |
Ga0233372_10125842 | 3300028482 | Elk Feces | MKYTVELNYNASIVVTVEANDEGEALDKARNIAEESDIEQFTITNERESQILSTN |
Ga0247611_1000385126 | 3300028591 | Rumen | MGKYVIELNYNASIIREVEANDEGQALDLARDAAEDADIREFTLGGESESRILRRE |
Ga0247611_1000563334 | 3300028591 | Rumen | MHKYTIQMNYNASIIVEVMAEEEGEALNKARDIAEDADIREFTLGGENESRILSTE |
Ga0247611_103048514 | 3300028591 | Rumen | RKYTIQLNYNASIIVDVNAEDEGEALDKARDIAEDADIRQFTIGGERESQILRQEG |
Ga0247611_103275682 | 3300028591 | Rumen | MKFTIQMNYNASYIAEVYANDEGEALDKAREMAEDADIRQFTIASENEAKILNRE |
Ga0247611_107934632 | 3300028591 | Rumen | MQKYVIEMNYNASIVVEVEANDEGEALDKARDKAEDADIRQFTLGKENESRILRRD |
Ga0247611_110887533 | 3300028591 | Rumen | MRKYTIQMNYNASIIVDVLAEDEGEALDKARDKAEDADIRQFVIGSENESKILRQD |
Ga0247611_119113683 | 3300028591 | Rumen | HMRKYTIQLNYNASIIVDVTGNDEGEALDNARNLAEDADIKEFTICGERESQILRQE |
Ga0265301_109393361 | 3300028797 | Rumen | MHKYTIQMNYNASIIVEVTANDEGEALDKARDKAEDADIRQFSLCNEQESRILRTD |
Ga0247608_1000181958 | 3300028805 | Rumen | MQKYVIEMNYNASIVVEVEANDEGEALDKARDKAEDADIRQFTLGKENESKILRRD |
Ga0247608_104231893 | 3300028805 | Rumen | MRKYTIRYNYKASIVVDVFANDEGEALEQGRNKAEDADINEYSICGELESQILRQE |
Ga0247608_106500121 | 3300028805 | Rumen | MHKYTIQMNYNASIVVEVIASDEGEALDKARDKAEDADIRQFILGSENESKILRTE |
Ga0247608_110190511 | 3300028805 | Rumen | MKKYTIQLNYNASIIVDVEVENTPNAEGEALEKARNIAEDADIREFTIGNERESQILRQG |
Ga0247608_112514301 | 3300028805 | Rumen | MQKYVIELNYNASIVVEVEANDEGEALDKARDRAEDADIRQFTLGKENESKILRRD |
Ga0265298_100386784 | 3300028832 | Rumen | MADRNYTVQLNFNASILVDVTADDNDPMVEGKVLEMARDIAEDADINEFTIGSERESQIIRRE |
Ga0265298_112910012 | 3300028832 | Rumen | MGKKYTIQLNYNASIVVDVNVPDEVPGNEAEGKALEMARDIAEDADIREYTISGERESQILRQG |
Ga0247610_1000180129 | 3300028833 | Rumen | MQKYVIEMNYNASIVVEVEADDEGEALDKARDKAEDADIRQFTLGKENESKILRRD |
Ga0247610_100325242 | 3300028833 | Rumen | MQKYIIEMNYNASIVVEVEANDEGEALDKARDKAEDADIRQFTLGKENESKILRRD |
Ga0247610_1004447710 | 3300028833 | Rumen | MHKYTIQMNYNASIIVEVTASDEGEALDKARDKAEDADIRQFTLGSENESKILRTE |
Ga0247610_101606194 | 3300028833 | Rumen | IKIDLYIMKYSVQMNFNATIVVDVEVENGPDAEGKALEKAREIAEDADIREFSICGEREAQILRQE |
Ga0247610_104326242 | 3300028833 | Rumen | MHRYEIQMNYNATITLEVEAEDEGQALDKARDIAEDADIRQFSLGSEGESKILRQQY |
Ga0247610_114790422 | 3300028833 | Rumen | MTYTIQMNYNASIVVNVEVDNTPDAEGKALELAREMAENADIKEFSICGEREAQILNRG |
Ga0247610_116664852 | 3300028833 | Rumen | MKRKYVIKLNYNASIVVDVEVEGDTPDAEGKALEMARNIAEDADIREFTIGAERESQILA |
Ga0256407_10000247165 | 3300028886 | Rumen | MGRFTIEMNYNASIIVEVNAEDEGKALDEARNIAEDADIREFTITSERESRILKRE |
Ga0256407_1000281459 | 3300028886 | Rumen | MRHYTVRCNFTASIDVDVMANDEGEALDKARDIAEDADAKQFTIHGERESQIIASD |
Ga0256407_103828841 | 3300028886 | Rumen | MKRNYSVKLNYNASIVVDVEVEAEQDSPDMEGKALEMARNYAEEADASEFTIGGERESQILAG |
Ga0265299_104894152 | 3300028887 | Rumen | MRKYTIQMNYYASIVVEVEVEDAPDAEGKALDLARDKAEDADIREFTLGAECEPRILRTD |
Ga0265299_105437252 | 3300028887 | Rumen | MPKYTIQMNYNASIVVEVMANDEGEALDKARDKAEDADIRQFTIGSENESKILRTE |
Ga0247609_100245916 | 3300028888 | Rumen | MGKFKVQMNYNASIVFEINAVDEGAALDKARDMAEDADIRQFVICNENDAKILYRE |
Ga0326513_1000229627 | 3300031760 | Rumen | MMKKYTVQLNYNASIIVDVEVESSPNAEGEAMEKARNIAEDADIREFTIGCERESQILRQ |
Ga0326513_100141071 | 3300031760 | Rumen | MKFTIQMNYNASYIAEVYANDEGEALDKAREMAEDADIRQFTIANENEAKILNRE |
Ga0326513_101147014 | 3300031760 | Rumen | MARKYTIQLNYNASIIVDVEVDGNSQNAEGEALEKARNYAEDADIREFTIGNERESQILRQG |
Ga0326513_101536656 | 3300031760 | Rumen | MRKYTIQLNYNASIIVEAMGNDEGEALDNARNIAEDADIKEFTICGERESQILRQD |
Ga0326513_101692721 | 3300031760 | Rumen | KYTVQLNYKASIIVDVEVENSPNAEGDALEKARNVAEDADIREFTIGSELESQVLRQG |
Ga0326513_101967781 | 3300031760 | Rumen | MKKKYTVQLNYKASIIVDVEVENSPNAEGDALEKARNVAEDADIREFTIG |
Ga0326513_102430362 | 3300031760 | Rumen | MKYSVQMNFNATIVVDVEVENGPDAEGKALEKAREIAEDADIREFSICGEREAQILRQE |
Ga0326513_102660934 | 3300031760 | Rumen | MKKKYTIQMNYNASIVVDVEVEVEHDSPDAEGKALEMARDIAEDADIREFTINGERESQILSVR |
Ga0326513_105296252 | 3300031760 | Rumen | MQKYVIEMNYNASIIVEVEANDEGEALDKARDKAEDADIRQFTLGKENESRILRRD |
Ga0326514_100212821 | 3300031853 | Rumen | MHKYTIQMNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSE |
Ga0326514_100369921 | 3300031853 | Rumen | MSKKYTIKLNYNASIIVDVEVDETPDAEGKALEKARDIAEDADIREFTIGAERE |
Ga0326514_100690013 | 3300031853 | Rumen | MMKKYTIQLNYNASIIVDVEVENTPNAEGDALEKARNIAEDADIREFTIGGERESQILRQ |
Ga0326514_102302444 | 3300031853 | Rumen | MMKKYTVQLNYNASIIVDVEVESSPNAEGEALEKARNIAEDADIREFTIGCERESQILRQ |
Ga0326514_103132942 | 3300031853 | Rumen | MHKYTIQMNYNASIIVEVMGNDEGEALDKARDMAEDADIRQFTLSGENESKILRTD |
Ga0326514_104307804 | 3300031853 | Rumen | MKKKYTVQLNYKASIIVDVEVENSPNAEGDALEKARNVAEDADIREFTIGSELESQVLRQ |
Ga0326514_108847271 | 3300031853 | Rumen | MKKKYTVQLNYKASIIVDVEVENSPNAEGDALEKARNVAEDADIREFTIGNELESQILRQ |
Ga0326514_110558612 | 3300031853 | Rumen | VIEMNYNASIVVEVEANDEGEALDKARDKAEDADIRQFTLGKENESRILRRD |
Ga0326511_102131273 | 3300031867 | Rumen | MKKKYTIQMNYNASIVVDVEVEVERDSPDAEGKALEMARDIAEDADIREFTISGERESQILNIR |
Ga0326511_103265844 | 3300031867 | Rumen | MARKYTVQLNYNASIIVETTGNDEGEALENARNIAEDADIREFTIGNERESQILRQG |
Ga0326511_104643952 | 3300031867 | Rumen | MKRKYAIKLNYNASIVVDVEVEGDTPDAEGKALEMARNIAEDADIREFTIGAERESQILA |
Ga0326511_106131421 | 3300031867 | Rumen | NYNASIIVDVEVDGSSPTAEGDALEKARNIAEDADIREFTICGERESQILRTL |
Ga0326511_107575222 | 3300031867 | Rumen | MGKFTIQCNYNASIIVDVIAEDEDSAMRKALDIAEDADINEFTICGEREHQVLSRG |
Ga0326511_110810892 | 3300031867 | Rumen | KYSIQMNYIASIIVEVTANDEGEALDKARDKAEDADIRQFTLGNEQESRILRTD |
Ga0326507_13041072 | 3300031899 | Rumen | MHKYTIQMNYNASIIVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILRTD |
Ga0326507_13326632 | 3300031899 | Rumen | MMKKYTVQLNYNASIIVDVEVENSPNAEGEALEKARNIAEDADIREFTIGCERESQILR |
Ga0310694_106567633 | 3300031992 | Rumen | MARKYTIQLNYNASIIVEVTGNDEGEALENARNYAEDADIREFTIGNERESQILRQS |
Ga0310786_104774952 | 3300031998 | Rumen | MGKKYTIQLNYNASIIVDVEVENTPNAEGDALEKARNIAEDADIREFTIGSERESQILRQ |
Ga0310786_120705051 | 3300031998 | Rumen | MHKYTIQMNYNASIVVEVMANDEGEALDKARDKAEDADIRQFTIGSENESKILRTE |
Ga0310697_102834713 | 3300032030 | Rumen | MGKFKVQMNYNASIVFEINAVDEGAALDKARDMAEDADIRQFVICNENDAKII |
Ga0326509_13732952 | 3300032036 | Rumen | MHKYTIQMNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSENE |
Ga0326508_11565321 | 3300032037 | Rumen | MNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILRTD |
Ga0326508_12581692 | 3300032037 | Rumen | MMKKYTVQLNYNASIIVDVEVESSPYAECDALEKARNIAEYAYFREFTIGCERESQILRQ |
Ga0326512_100016058 | 3300032038 | Rumen | MSKKYTIKLNYNASIIVDVEVDETPDAEGRALEKARDIAEDADIREFTIGAERESEILRQ |
Ga0326512_1000220210 | 3300032038 | Rumen | MQYTIELNYVASIRVTVNGDFRDEGEALDKARNMAEDADMNEFTIGNELESRIIEQR |
Ga0326512_100284662 | 3300032038 | Rumen | MAKGYTIQLNYNATITVNVEGRFNDEGEALDKAREIAEDADINEFTIGEERESKILNTY |
Ga0326512_102421042 | 3300032038 | Rumen | MRKYTIQCNFNASITVEVTANDEGEALEKARNIAEDADIREFTIGAERESQILRQD |
Ga0326512_103437753 | 3300032038 | Rumen | MARKYTIQLNYNASIIVDVTGNDEGEALENARNIAEDADIKEFTIGAERERQILRQS |
Ga0326512_105468023 | 3300032038 | Rumen | MQKYIIEINYNASIVVEVEANDEGEALDKARDKAEDADIRQFTLGKENESKILRRG |
Ga0326512_106113062 | 3300032038 | Rumen | MKKKYTVQLNYKASIIVDVEVENSPNAEGDALEKARNAAEDADIREFTIGNELESQILRQ |
Ga0326512_107186601 | 3300032038 | Rumen | MTYTIQMNYNASIVVNVEVDNGPDAEGKALELAREMAENADIKEFSICGEREAQILNRG |
Ga0326512_109265111 | 3300032038 | Rumen | MRKYTIQLNYNASIIVDVNAEDEGEALDKARDIAEDADIRQFTIGGERESQILRQE |
Ga0326512_111594492 | 3300032038 | Rumen | MHRYTIQMNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILR |
Ga0326512_113353262 | 3300032038 | Rumen | MKRKYTIKLNYNASIVVDVEVEGDTPDAEGKALEMARNIAEDADIREFTIGAERESQILA |
Ga0310690_100523693 | 3300033463 | Rumen | MKKYTIQLNYNASIIEEVHADDEGEALDKARDLAEDADIRQFTIGSERESKIFSVC |
SRS050244_LANL_scaffold_100742__gene_134780 | 7000000128 | Human | MSKYTIKFNYKASITIEVEGDFRHEGDALDKAREIAEDADIEEFNIGEEMESKILNVE |
C6970947__gene_142857 | 7000000270 | Human | MSKYTIKFNYKASIVIEVEGDFRHEGDALDKAREIAEDADIEEFNIGEEMESKILNVE |
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