3300009965: Human saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 7

Overview

Basic Information

• IMG/M Taxon OID: 3300009965
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0120337 | Gp0151213 | Ga0133741
• Sample Name: Human saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 7
• Sequencing Status: Permanent Draft
• Sequencing Center: Autonomous University of Barcelona
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 13135811
• Sequencing Scaffolds: 9
• Novel Protein Genes: 15
• Associated Families: 14

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3
Not Available	6

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Human Saliva Viral Communities From Oral Cavities Of Healthy Adults From Alicante,Spain
• Type: Host-Associated
• Taxonomy: Host-Associated → Human → Digestive System → Oral Cavity → Saliva → Human Oral Cavity → Human Saliva Viral Communities From Oral Cavities Of Healthy Adults From Alicante,Spain

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal secretion

Location Information

• Location: Alicante,Spain
• Coordinates
  • Lat. (^o): 38.3852246
  • Long. (^o): -0.5132249
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F027205	Metagenome	195	N
F028722	Metagenome / Metatranscriptome	190	Y
F043991	Metagenome	155	N
F049707	Metagenome	146	N
F051214	Metagenome	144	N
F067846	Metagenome	125	Y
F071329	Metagenome	122	N
F076191	Metagenome	118	N
F082826	Metagenome / Metatranscriptome	113	Y
F084362	Metagenome	112	N
F095632	Metagenome	105	N
F103430	Metagenome	101	N
F105376	Metagenome	100	N
F105378	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0133741_100016	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	44015
Ga0133741_100035	Not Available	31136
Ga0133741_100037	Not Available	30360
Ga0133741_100060	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	19351
Ga0133741_100191	Not Available	7529
Ga0133741_101043	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1854
Ga0133741_101585	Not Available	1326
Ga0133741_101738	Not Available	1237
Ga0133741_105637	Not Available	586

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0133741_100016	Ga0133741_10001612	F043991	VSKKTPSVIDYFSLNGDVVEEANEFDGINLEDWIDKRSSIKPSWVGQYSKQMHFDLPDDTEASFYKTPNVIYADILFAGGIRTILFKCRQKKNLTRFISRVLEIAQGDPSNVHPDFRA*
Ga0133741_100016	Ga0133741_10001613	F051214	MPGKIVAHDTHLRIDTEFIELKDCFEAFRRGVEYRENNDVDDILVICNTPDIIEYQLKNGDSFIVTYDPIHRIIVMRVFLHDEDIAIKPIYIYNNREYQIACEFLRQIMHDKIDLKKEWLA*
Ga0133741_100016	Ga0133741_10001614	F071329	MRPLYSKGILMLPVAKIIISGLSSIGAGMIASKLTKPIVSNANGIAKILLWFGSVGTGVAASAIIAREVEKQFDETVKAVKEARDHVEIED*
Ga0133741_100016	Ga0133741_1000169	F027205	VASRLIVSADDILKAVKESEEFEKKALSEARKRDRAEGKEPRETLYPNPDLKPGREIVLDYIKNPERRRTPRCSVHLEKRTANNSYRFVVDVSQVRNRDLADEIEKDLFAFMDYLLDEYDIPRRIRK*
Ga0133741_100035	Ga0133741_10003519	F076191	MKIIAENPAEEALLWRIKALSDELVNQDNRSTNMPMWTILDNNKAGKDYGAVMYFTGKAAEQHINENDHHYKKPMICVRSAHDNRELKDVIHLLILAGENEIPSNHYGVLRDA*
Ga0133741_100035	Ga0133741_10003537	F105376	MNKDKKGENMEPEVSAKEFGALEADVRHIKEGVDKHTITLERIENIARANVTQAQLKAYIAEHEKESEEKYVKRTEIEGVMNFWSLVTSNLAKLFAIALVGLAIYATNNLIQQNKAVTELQEEVQQTQVRRK*
Ga0133741_100037	Ga0133741_1000373	F103430	VKQITIKAFIGSNNKTKQLEVDKIISTVNANHEAFTLDYPVIGYWRGEAEETAVLYLSDERQKVMNTLNELKEVLDQEAIAYQIENDLQLI*
Ga0133741_100037	Ga0133741_10003732	F084362	MSLMNCTFTVRWSDEKNEPHAKTYATEADAKRAKKWLLEHGVRSVDIAVKINNKPAGSLKDDKSSETAAEQKGFWWEK*
Ga0133741_100060	Ga0133741_10006028	F095632	MSFKETTGYKVVSLVASTSASITAGAVVGALCPPAGVVLTAIYGVGSSVLGTYVGDKAGRQYAETLAETIDSIQTPQNN*
Ga0133741_100060	Ga0133741_1000607	F049707	VVSEYRSPHNDGHDPYILIWEYGNDIRRAEFTERWAECDETGWAIWYFRLVDGGIMTFSAREWEQKDDVNHLTTIWMKPSLYDIERKAS*
Ga0133741_100191	Ga0133741_1001914	F105378	MNVKVYVDKIKKWVQISSDEVLDVNKNLSDLKDKEAAITNLGLYEKFISKEALESGFLPDVFTPDNIVTDSTHQFVTDEEKSKWNNKLNEPVPMQDHLENNQIGYDSTNSKFYIGLNNQNVLLGGSSCFDNIIVVNGFFSGNSQPTIIRNNKFNEAGQLITPLFVDVQCVEYTAGDLGEVSVSYTVDSISIYNTGSFTGSFQCLIVYPLGSVNE*
Ga0133741_101043	Ga0133741_1010435	F095632	MTMSFKETTGYKVVSLVASTSASITAGAVVGALCPPAGVVLTAIYGVGSSVLGTYVGDKAGRQYAETLAETIDSLQTPQNN*
Ga0133741_101585	Ga0133741_1015851	F028722	MSTINENGQTCLELRGITERHNEIVRSDYNIDNQYNAGHKDALSDGDAQGKGTGHGGHTAWLPDCTKPTNMINYSNFDTAHGGGIYDIEGRNDIGGRNKSLASELYNRENQYSSNLVKTAENISQGQYFVGQTLKNF*
Ga0133741_101738	Ga0133741_1017382	F082826	MSKYTIKFNYKASIVIEVEGDFRHEGDALDKAREIAEDADIEEFNIGKEMESKILNVE*
Ga0133741_105637	Ga0133741_1056372	F067846	QCSKEDDYNRAIEMEIESIKEDIANGDDDAICAFSEKMFDDDEFLKAVALGTDYEEMRIKILTAMAEDRLEQLEEDYRKGYILND*