NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300002597

3300002597: Camel rumen microbial communities from Jandagh-Isfahan, Iran - Sample 1



Overview

Basic Information
IMG/M Taxon OID3300002597 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0111350 | Gp0092447 | Ga0041811
Sample NameCamel rumen microbial communities from Jandagh-Isfahan, Iran - Sample 1
Sequencing StatusPermanent Draft
Sequencing CenterBeijing Genomics Institute (BGI)
Published?Y
Use PolicyOpen

Dataset Contents
Total Genome Size815662394
Sequencing Scaffolds17
Novel Protein Genes19
Associated Families18

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available12
All Organisms → cellular organisms → Bacteria1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → unclassified Rikenellaceae → Rikenellaceae bacterium1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameCamel Rumen Microbial Communities From Jandagh-Isfahan, Iran
TypeHost-Associated
TaxonomyHost-Associated → Mammals → Digestive System → Foregut → Rumen → Camel Rumen → Camel Rumen Microbial Communities From Jandagh-Isfahan, Iran

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Host-associated → Animal → Animal proximal gut

Location Information
LocationJandaq, Isfahan Province, Iran
CoordinatesLat. (o)34.041281Long. (o)54.414582Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

Associated Scaffolds

Sequences


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