Sample 3300027403

Overview

Basic Information
IMG/M Taxon OID	3300027403 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0095510 \| Gp0055674 \| Ga0207609
Sample Name	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A5-11 (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	23985483
Sequencing Scaffolds	26
Novel Protein Genes	30
Associated Families	30

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	1
All Organisms → cellular organisms → Bacteria	5
All Organisms → cellular organisms → Bacteria → Acidobacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2
Not Available	4
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Soil Microbial Communities From Arlington Agricultural Research Station In Wisconsin And Kellogg Biological Station In Michigan, Replicating The Bioenergy Cropping Systems Trials (Bcsts)
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil → Soil Microbial Communities From Arlington Agricultural Research Station In Wisconsin And Kellogg Biological Station In Michigan, Replicating The Bioenergy Cropping Systems Trials (Bcsts)

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → agricultural field → agricultural soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Wisconsin, United States
Coordinates	Lat. (^o)	43.2958	Long. (^o)	-89.3799	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000268	Metagenome / Metatranscriptome	1411	Y
F000336	Metagenome / Metatranscriptome	1274	Y
F001033	Metagenome / Metatranscriptome	799	Y
F001757	Metagenome / Metatranscriptome	641	N
F003318	Metagenome / Metatranscriptome	494	Y
F006680	Metagenome / Metatranscriptome	367	Y
F020952	Metagenome / Metatranscriptome	221	Y
F021340	Metagenome	219	Y
F029584	Metagenome / Metatranscriptome	188	Y
F032617	Metagenome	179	Y
F032686	Metagenome	179	Y
F040398	Metagenome / Metatranscriptome	162	Y
F044132	Metagenome / Metatranscriptome	155	Y
F046034	Metagenome	152	Y
F048216	Metagenome / Metatranscriptome	148	Y
F052029	Metagenome	143	Y
F057488	Metagenome	136	N
F059558	Metagenome / Metatranscriptome	133	Y
F067813	Metagenome / Metatranscriptome	125	Y
F071393	Metagenome	122	N
F075211	Metagenome	119	Y
F079285	Metagenome	116	N
F081321	Metagenome / Metatranscriptome	114	N
F082749	Metagenome / Metatranscriptome	113	Y
F084203	Metagenome / Metatranscriptome	112	N
F087587	Metagenome	110	N
F089000	Metagenome	109	N
F094081	Metagenome / Metatranscriptome	106	Y
F097297	Metagenome / Metatranscriptome	104	Y
F101470	Metagenome	102	Y

Family

Category

Number of Sequences

3D Structure?

F000268

Metagenome / Metatranscriptome

1411

F000336

Metagenome / Metatranscriptome

1274

F001033

Metagenome / Metatranscriptome

799

F001757

Metagenome / Metatranscriptome

641

F003318

Metagenome / Metatranscriptome

494

F006680

Metagenome / Metatranscriptome

367

F020952

Metagenome / Metatranscriptome

221

F021340

Metagenome

219

F029584

Metagenome / Metatranscriptome

188

F032617

Metagenome

179

F032686

Metagenome

179

F040398

Metagenome / Metatranscriptome

162

F044132

Metagenome / Metatranscriptome

155

F046034

Metagenome

152

F048216

Metagenome / Metatranscriptome

148

F052029

Metagenome

143

F057488

Metagenome

136

F059558

Metagenome / Metatranscriptome

133

F067813

Metagenome / Metatranscriptome

125

F071393

Metagenome

122

F075211

Metagenome

119

F079285

Metagenome

116

F081321

Metagenome / Metatranscriptome

114

F082749

Metagenome / Metatranscriptome

113

F084203

Metagenome / Metatranscriptome

112

F087587

Metagenome

110

F089000

Metagenome

109

F094081

Metagenome / Metatranscriptome

106

F097297

Metagenome / Metatranscriptome

104

F101470

Metagenome

102

Scaffold	Taxonomy	Length	IMG/M Link
Ga0207609_100416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1172	Open in IMG/M
Ga0207609_100854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	948	Open in IMG/M
Ga0207609_101076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	876	Open in IMG/M
Ga0207609_101216	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	840	Open in IMG/M
Ga0207609_101696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	750	Open in IMG/M
Ga0207609_101708	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
Ga0207609_101734	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
Ga0207609_101791	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	733	Open in IMG/M
Ga0207609_101943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	713	Open in IMG/M
Ga0207609_101947	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
Ga0207609_101953	Not Available	712	Open in IMG/M
Ga0207609_102039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	701	Open in IMG/M
Ga0207609_102163	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
Ga0207609_102756	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
Ga0207609_102835	Not Available	619	Open in IMG/M
Ga0207609_102911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
Ga0207609_102937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	611	Open in IMG/M
Ga0207609_103384	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
Ga0207609_103447	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
Ga0207609_103667	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
Ga0207609_103704	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
Ga0207609_103857	Not Available	554	Open in IMG/M
Ga0207609_104055	Not Available	544	Open in IMG/M
Ga0207609_104180	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
Ga0207609_104188	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
Ga0207609_104551	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	522	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0207609_100416

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales

1172

Open in IMG/M

Ga0207609_100854

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium

948

Open in IMG/M

Ga0207609_101076

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei

876

Open in IMG/M

Ga0207609_101216

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium

840

Open in IMG/M

Ga0207609_101696

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium

750

Open in IMG/M

Ga0207609_101708

All Organisms → cellular organisms → Bacteria

748

Open in IMG/M

Ga0207609_101734

All Organisms → cellular organisms → Bacteria → Acidobacteria

744

Open in IMG/M

Ga0207609_101791

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium

733

Open in IMG/M

Ga0207609_101943

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium

713

Open in IMG/M

Ga0207609_101947

All Organisms → cellular organisms → Bacteria

713

Open in IMG/M

Ga0207609_101953

Not Available

712

Open in IMG/M

Ga0207609_102039

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium

701

Open in IMG/M

Ga0207609_102163

All Organisms → cellular organisms → Bacteria

685

Open in IMG/M

Ga0207609_102756

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium

625

Open in IMG/M

Ga0207609_102835

Not Available

619

Open in IMG/M

Ga0207609_102911

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium

612

Open in IMG/M

Ga0207609_102937

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales

611

Open in IMG/M

Ga0207609_103384

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium

580

Open in IMG/M

Ga0207609_103447

All Organisms → cellular organisms → Bacteria

576

Open in IMG/M

Ga0207609_103667

All Organisms → cellular organisms → Bacteria → Acidobacteria

564

Open in IMG/M

Ga0207609_103704

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium

562

Open in IMG/M

Ga0207609_103857

Not Available

554

Open in IMG/M

Ga0207609_104055

Not Available

544

Open in IMG/M

Ga0207609_104180

All Organisms → cellular organisms → Bacteria

537

Open in IMG/M

Ga0207609_104188

All Organisms → cellular organisms → Bacteria → Proteobacteria

537

Open in IMG/M

Ga0207609_104551

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium

522

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0207609_100258	Ga0207609_1002582	F082749	MHAAGELGCQRLINHAVTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS
Ga0207609_100416	Ga0207609_1004163	F052029	HRRSDAFANRGAPLALNFRSILPVDSVAEQEINNTGALSEQLVTIGAASLALLVVAAIAVLMGMA
Ga0207609_100854	Ga0207609_1008541	F001033	GAVNLNERPFMKFVSRTKLTAVPYQIHLHTNEKRELLMCGHSLIARLTIAVFVFQMLGVTSVVHAERPDSTAGTSRAGTRKLFIDPSSTSVALRGKASLIVSPLTHRDGNYVGDYQLKVRPYFFKSEKGSLLLAASDDAVRKLQAGTAINFTGQAVTHKDGRTHIVLGRATPSSSDRGSVTFSIVTDDARIVFNTSYHFGT
Ga0207609_101076	Ga0207609_1010761	F084203	MRARVRRAMWMLGALALAVPASAQESTDVAPLTPEDSALLANALVFDPAALVTAPKKPLRLPGYRNNEYDITRTQKVDGSTTVVVKQPVQTEWSNSVGADLAPSKPTAYPLPL
Ga0207609_101216	Ga0207609_1012162	F001757	MRILKPLQDKATTGAGKRLVLPEPRRVRFLIRGEGSVSAGAVTIECCPESTKAGKFWMELATIAVPADYGLAQYYTEEASGLLRARISRPVSNGTVTVTPLVSRGRPDRPDRTKVV
Ga0207609_101696	Ga0207609_1016961	F071393	LADRVHAAEAASDRREATVALSIKQIEFLNTELTAAAAERFRLVAAMQGEQRRQRSVFSQQKSILEDKLQEKEALAATQGTKIKQLEGVRDELDKRVRVIEALLASEREVAERKTRRPTEILGAAG
Ga0207609_101708	Ga0207609_1017082	F075211	MRRTLLAIGIAVLVSMMALMFLGGLLKKAARIVDDLRDPPPRPPL
Ga0207609_101734	Ga0207609_1017342	F059558	CVCPSNQLLGSSIKGKVKKKHFSRGWNFSTFAAHLIEQDLF
Ga0207609_101791	Ga0207609_1017912	F029584	VRGKDRKVNPRDPAGVPGRFLANARMIGDVAHQKTDRREEGYDHAHHVTAPRTAPDEVPTRGNENSAHEIKRGIEGGQVGG
Ga0207609_101943	Ga0207609_1019432	F032686	KGREAIEVTIAGGTVRYSHVVRLRDAAEPVSEQGKGSLNGQDIELQGSWKAGNRQYEAKYSGAFVRRHADLKGTQTWTDGGKSFTRACTGTIKRPFRVFLPGEKK
Ga0207609_101947	Ga0207609_1019472	F000268	MLMRVVAVMLLLSAGIAAEAMSYSFVSKASGRLGGPIRFEFYRDSTTRPKTDIKSFTVSMRTADDRWKAMWSILSGRGLTQPIEYGVTPPGFTTMIQPQKLIPGRVYAGFATDGHGGSSGVTFGFDKNGRMIFPDSFDSMSGE
Ga0207609_101953	Ga0207609_1019531	F057488	GIPITVSVTSWITVNSVGDETTVDARIFADLIDLQKKFSDVVDSFKRSARNCNRSADGQNPVVSFKSGSLWPRNDQLIMFVRGDIDIWSCSVGPPQSAIRWEKTKVSFLTLKLPVRRTWRNVKRNMDGTQPFHGTLLVSLAEKDGANVALRNTEPNLRLDGEPTFATNANLSLAKTDMNDKVSKTLRSAIDLTKLKDVLPKELQKFNMTVNSARFRDRGGHAIAEINLVGKASSTPT
Ga0207609_102039	Ga0207609_1020393	F046034	LYEQALKAFVIDHMSMLVVGVGRDLPVPAYAPIAHAA
Ga0207609_102163	Ga0207609_1021632	F079285	RAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLMHSGEGHSISAPG
Ga0207609_102612	Ga0207609_1026121	F097297	TQDVINEKEFKKGAAHESAAVVIVDNPAPQTVVHENRNAAVAEITPDEEAAVLATVAAVLAKIDPQPPTADDNVTRPEPVREDAELSAAKRAIIHEWESWSALHSDELGDPKVAEYFFRHLQTKKPQLLNFGFQDKLMMVRRCLVD
Ga0207609_102756	Ga0207609_1027561	F048216	MSPSALNPTTEVIKVVCLMSLEEMPRDVKALEERIIEKVQQSGREFYAAVFYAFERRWLQERGGDYTAVRWRTIDQVTPFGLIRLPVRVVRERGAQKGGYLSLSKALLKPKATRLLSPWVEKGVLEATTCSNYRPAAAELWRWVRVKVSAWLIWKCVQFHGARLCEQLERQWWPDRALPR
Ga0207609_102835	Ga0207609_1028351	F089000	MGEPTPATPASKYFAATVAMIAGAFFFAVGAGLLPIPGGPSNLHGPLWLLLCVGLAFFLAGLAILIPMLGHANDS
Ga0207609_102911	Ga0207609_1029111	F006680	MKISKFVWSILVAFAIVALIAPQQVEAIIVDGRVNGQIVLTGSGTITESTGINSTGINSTGINSNGINRLDFNGENFPHGPLSVTNATGDYIPTVGSQAIFDLPIRWTGSGSSVNLLDVLPGVGGPAWNIFITGDGNATGTLFSLKSVTFDEDSLTLIGRGTTQIISSDPL
Ga0207609_102937	Ga0207609_1029371	F040398	RSLVAGITDAAVVSNEFEAVMPSNIKVLAKGSSAVPNFLRLCVATSGKVLSERRDDLVKFVAAEMDAYKFALANRAETIKVSQEMTHAKPDDKRAEFITDEAIKDKQIDPTLSIPLDRLDWMQNLFLKAGVIKQTVPIESIVDKSVNADAAKIAGK
Ga0207609_103384	Ga0207609_1033841	F032617	NLALIPGAFVQLSGNSEIKIEDLRLTKDGNDTAERMLDRRAWIRLNRGRIVSLFKQSDRTASEFGITTGPVTLRPESDCLFSVWTDGITSRATCLRGEVSAAADAQPPLKIAAGYFSQWPTASKEPIAASNDARAQMDITTALSVEPELMDQAAGW
Ga0207609_103447	Ga0207609_1034471	F021340	FIKFSKAVCPLNMRHSKLQTFQAHRTIARANVARSQFWHVAIVTLFFVIVLGASLFLGTVMVIGTFHGVDPSNELTANGRAGRIARTLRDGTLCHYMIFDNKTAQTVEDRIGRCDENKPKPKQERPATFTWGK
Ga0207609_103600	Ga0207609_1036001	F094081	MRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTETSPSETPASKLPSKKASLKKAPSKGVRS
Ga0207609_103667	Ga0207609_1036671	F087587	ALEVALPDLPAQAAQRRFPKLDPRVISREHVEQGVRVVLAKMPGTDIYLRFSPEQWQVAQLFDGERSYKQISDLLLHEYNIDFPEDYVKEFTSYLEEQGELLYKTPLEKNITLKAKMGTERQKRGRFHIADVTDITLHTWPNADDYLTRIQPYFEFVYTTWFTLLTLFMFGVMVWMWTDKLGQIWND
Ga0207609_103704	Ga0207609_1037042	F020952	MPIIEKTLRFGAIALAMLFIGLSLVGIFGAWFVDRKATDVTLKGFGLIETGVHVVDAGVGRVNELIA
Ga0207609_103857	Ga0207609_1038571	F067813	MSRAEQYMNLAAEVRAKAELEDSPIIRAEWENLAETYVRLAEQSEGAFNASTYDPIQDMLNRAQPKKKKR
Ga0207609_104055	Ga0207609_1040551	F101470	KQEDVLAFEVSDEALEAAAGSEQVNYTLGACTGLSVCPG
Ga0207609_104180	Ga0207609_1041801	F003318	FDAKVTEGNSKFQQAITNEKFNARRPVLVDLKGQFDADATHLRSKASGGKVTPALASEMKKDVNKVYDHALGR
Ga0207609_104180	Ga0207609_1041802	F000336	MPSAGKPKRKKHKKSELDSALGQISDESVAATKEEFQDLLSQAKGDTSELVRQNAEELERRLVLLKKRKIDKEDFDFFVENQKRDLRVFIDSQPAQQQERAEKLTLRVLE
Ga0207609_104188	Ga0207609_1041881	F081321	GNARFATLSQLMRIVSRAAALVSLALMLASPARAACTGSCEPSVEVAQAAMQKIFKETFLSPYTLISFERLDGRSGERYGGVFYEMRIRAVLHYDGVKLRCRRPACPELHHYLLEDDARSKKATVAGWLFLQQDGEGDWQPVPLTPGPQ
Ga0207609_104551	Ga0207609_1045512	F044132	AAPDRMAPVSRFGNENGQTTIKQGNGTFQFGGQRSFDQRYNTDNIFNPYARDGR

Scaffold ID

Protein ID

Family

Sequence

Ga0207609_100258

Ga0207609_1002582

F082749

MHAAGELGCQRLINHAVTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS

Ga0207609_100416

Ga0207609_1004163

F052029

HRRSDAFANRGAPLALNFRSILPVDSVAEQEINNTGALSEQLVTIGAASLALLVVAAIAVLMGMA

Ga0207609_100854

Ga0207609_1008541

F001033

GAVNLNERPFMKFVSRTKLTAVPYQIHLHTNEKRELLMCGHSLIARLTIAVFVFQMLGVTSVVHAERPDSTAGTSRAGTRKLFIDPSSTSVALRGKASLIVSPLTHRDGNYVGDYQLKVRPYFFKSEKGSLLLAASDDAVRKLQAGTAINFTGQAVTHKDGRTHIVLGRATPSSSDRGSVTFSIVTDDARIVFNTSYHFGT

Ga0207609_101076

Ga0207609_1010761

F084203

MRARVRRAMWMLGALALAVPASAQESTDVAPLTPEDSALLANALVFDPAALVTAPKKPLRLPGYRNNEYDITRTQKVDGSTTVVVKQPVQTEWSNSVGADLAPSKPTAYPLPL

Ga0207609_101216

Ga0207609_1012162

F001757

MRILKPLQDKATTGAGKRLVLPEPRRVRFLIRGEGSVSAGAVTIECCPESTKAGKFWMELATIAVPADYGLAQYYTEEASGLLRARISRPVSNGTVTVTPLVSRGRPDRPDRTKVV

Ga0207609_101696

Ga0207609_1016961

F071393

LADRVHAAEAASDRREATVALSIKQIEFLNTELTAAAAERFRLVAAMQGEQRRQRSVFSQQKSILEDKLQEKEALAATQGTKIKQLEGVRDELDKRVRVIEALLASEREVAERKTRRPTEILGAAG

Ga0207609_101708

Ga0207609_1017082

F075211

MRRTLLAIGIAVLVSMMALMFLGGLLKKAARIVDDLRDPPPRPPL

Ga0207609_101734

Ga0207609_1017342

F059558

CVCPSNQLLGSSIKGKVKKKHFSRGWNFSTFAAHLIEQDLF

Ga0207609_101791

Ga0207609_1017912

F029584

VRGKDRKVNPRDPAGVPGRFLANARMIGDVAHQKTDRREEGYDHAHHVTAPRTAPDEVPTRGNENSAHEIKRGIEGGQVGG

Ga0207609_101943

Ga0207609_1019432

F032686

KGREAIEVTIAGGTVRYSHVVRLRDAAEPVSEQGKGSLNGQDIELQGSWKAGNRQYEAKYSGAFVRRHADLKGTQTWTDGGKSFTRACTGTIKRPFRVFLPGEKK

Ga0207609_101947

Ga0207609_1019472

F000268

MLMRVVAVMLLLSAGIAAEAMSYSFVSKASGRLGGPIRFEFYRDSTTRPKTDIKSFTVSMRTADDRWKAMWSILSGRGLTQPIEYGVTPPGFTTMIQPQKLIPGRVYAGFATDGHGGSSGVTFGFDKNGRMIFPDSFDSMSGE

Ga0207609_101953

Ga0207609_1019531

F057488

GIPITVSVTSWITVNSVGDETTVDARIFADLIDLQKKFSDVVDSFKRSARNCNRSADGQNPVVSFKSGSLWPRNDQLIMFVRGDIDIWSCSVGPPQSAIRWEKTKVSFLTLKLPVRRTWRNVKRNMDGTQPFHGTLLVSLAEKDGANVALRNTEPNLRLDGEPTFATNANLSLAKTDMNDKVSKTLRSAIDLTKLKDVLPKELQKFNMTVNSARFRDRGGHAIAEINLVGKASSTPT

Ga0207609_102039

Ga0207609_1020393

F046034

LYEQALKAFVIDHMSMLVVGVGRDLPVPAYAPIAHAA

Ga0207609_102163

Ga0207609_1021632

F079285

RAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLMHSGEGHSISAPG

Ga0207609_102612

Ga0207609_1026121

F097297

TQDVINEKEFKKGAAHESAAVVIVDNPAPQTVVHENRNAAVAEITPDEEAAVLATVAAVLAKIDPQPPTADDNVTRPEPVREDAELSAAKRAIIHEWESWSALHSDELGDPKVAEYFFRHLQTKKPQLLNFGFQDKLMMVRRCLVD

Ga0207609_102756

Ga0207609_1027561

F048216

MSPSALNPTTEVIKVVCLMSLEEMPRDVKALEERIIEKVQQSGREFYAAVFYAFERRWLQERGGDYTAVRWRTIDQVTPFGLIRLPVRVVRERGAQKGGYLSLSKALLKPKATRLLSPWVEKGVLEATTCSNYRPAAAELWRWVRVKVSAWLIWKCVQFHGARLCEQLERQWWPDRALPR

Ga0207609_102835

Ga0207609_1028351

F089000

MGEPTPATPASKYFAATVAMIAGAFFFAVGAGLLPIPGGPSNLHGPLWLLLCVGLAFFLAGLAILIPMLGHANDS

Ga0207609_102911

Ga0207609_1029111

F006680

MKISKFVWSILVAFAIVALIAPQQVEAIIVDGRVNGQIVLTGSGTITESTGINSTGINSTGINSNGINRLDFNGENFPHGPLSVTNATGDYIPTVGSQAIFDLPIRWTGSGSSVNLLDVLPGVGGPAWNIFITGDGNATGTLFSLKSVTFDEDSLTLIGRGTTQIISSDPL

Ga0207609_102937

Ga0207609_1029371

F040398

RSLVAGITDAAVVSNEFEAVMPSNIKVLAKGSSAVPNFLRLCVATSGKVLSERRDDLVKFVAAEMDAYKFALANRAETIKVSQEMTHAKPDDKRAEFITDEAIKDKQIDPTLSIPLDRLDWMQNLFLKAGVIKQTVPIESIVDKSVNADAAKIAGK

Ga0207609_103384

Ga0207609_1033841

F032617

NLALIPGAFVQLSGNSEIKIEDLRLTKDGNDTAERMLDRRAWIRLNRGRIVSLFKQSDRTASEFGITTGPVTLRPESDCLFSVWTDGITSRATCLRGEVSAAADAQPPLKIAAGYFSQWPTASKEPIAASNDARAQMDITTALSVEPELMDQAAGW

Ga0207609_103447

Ga0207609_1034471

F021340

FIKFSKAVCPLNMRHSKLQTFQAHRTIARANVARSQFWHVAIVTLFFVIVLGASLFLGTVMVIGTFHGVDPSNELTANGRAGRIARTLRDGTLCHYMIFDNKTAQTVEDRIGRCDENKPKPKQERPATFTWGK

Ga0207609_103600

Ga0207609_1036001

F094081

MRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTETSPSETPASKLPSKKASLKKAPSKGVRS

Ga0207609_103667

Ga0207609_1036671

F087587

ALEVALPDLPAQAAQRRFPKLDPRVISREHVEQGVRVVLAKMPGTDIYLRFSPEQWQVAQLFDGERSYKQISDLLLHEYNIDFPEDYVKEFTSYLEEQGELLYKTPLEKNITLKAKMGTERQKRGRFHIADVTDITLHTWPNADDYLTRIQPYFEFVYTTWFTLLTLFMFGVMVWMWTDKLGQIWND

Ga0207609_103704

Ga0207609_1037042

F020952

MPIIEKTLRFGAIALAMLFIGLSLVGIFGAWFVDRKATDVTLKGFGLIETGVHVVDAGVGRVNELIA

Ga0207609_103857

Ga0207609_1038571

F067813

MSRAEQYMNLAAEVRAKAELEDSPIIRAEWENLAETYVRLAEQSEGAFNASTYDPIQDMLNRAQPKKKKR

Ga0207609_104055

Ga0207609_1040551

F101470

KQEDVLAFEVSDEALEAAAGSEQVNYTLGACTGLSVCPG

Ga0207609_104180

Ga0207609_1041801

F003318

FDAKVTEGNSKFQQAITNEKFNARRPVLVDLKGQFDADATHLRSKASGGKVTPALASEMKKDVNKVYDHALGR

Ga0207609_104180

Ga0207609_1041802

F000336

MPSAGKPKRKKHKKSELDSALGQISDESVAATKEEFQDLLSQAKGDTSELVRQNAEELERRLVLLKKRKIDKEDFDFFVENQKRDLRVFIDSQPAQQQERAEKLTLRVLE

Ga0207609_104188

Ga0207609_1041881

F081321

GNARFATLSQLMRIVSRAAALVSLALMLASPARAACTGSCEPSVEVAQAAMQKIFKETFLSPYTLISFERLDGRSGERYGGVFYEMRIRAVLHYDGVKLRCRRPACPELHHYLLEDDARSKKATVAGWLFLQQDGEGDWQPVPLTPGPQ

Ga0207609_104551

Ga0207609_1045512

F044132

AAPDRMAPVSRFGNENGQTTIKQGNGTFQFGGQRSFDQRYNTDNIFNPYARDGR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300027403: Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A5-11 (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences