Metagenome Family F079285

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079285
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	117 residues
Representative Sequence	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLTHSGEGHS
Number of Associated Samples	95
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	21.55 %
% of genes near scaffold ends (potentially truncated)	42.24 %
% of genes from short scaffolds (< 2000 bps)	68.97 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.483 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere (9.483 % of family members)
Environment Ontology (ENVO)	Unclassified (56.034 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (79.310 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.85% β-sheet: 0.00% Coil/Unstructured: 31.15%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF07638	Sigma70_ECF	23.28
PF00691	OmpA	13.79
PF08031	BBE	6.03
PF12697	Abhydrolase_6	5.17
PF00561	Abhydrolase_1	4.31
PF01070	FMN_dh	3.45
PF13620	CarboxypepD_reg	3.45
PF14026	DUF4242	3.45
PF13540	RCC1_2	3.45
PF03704	BTAD	2.59
PF01425	Amidase	1.72
PF00486	Trans_reg_C	0.86
PF00291	PALP	0.86
PF14559	TPR_19	0.86
PF07719	TPR_2	0.86
PF03807	F420_oxidored	0.86
PF10518	TAT_signal	0.86
PF00069	Pkinase	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	23.28
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	6.03
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	3.45
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.45
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	3.45
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	2.59
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	2.59
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.48 %
Unclassified	root	N/A	15.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.48 %
Unclassified	root	N/A	15.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.48 %
Unclassified	root	N/A	15.52 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	44.83 %
Unclassified	root	N/A	15.52 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.45 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	43.97 %
Unclassified	root	N/A	15.52 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.45 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	30.17 %
Unclassified	root	N/A	15.52 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	5.17 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.45 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	30.17 %
Unclassified	root	N/A	15.52 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5.17 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.45 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	30.17 %
Unclassified	root	N/A	15.52 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5.17 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	3.45 %

Name	Rank	Taxonomy	Distribution
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	18.10 %
Unclassified	root	N/A	15.52 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5.17 %
Granulicella arctica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	3.45 %

Name	Rank	Taxonomy	Distribution
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	18.10 %
Unclassified	root	N/A	15.52 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5.17 %
Granulicella arctica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	3.45 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459016\|G1P06HT01CLT0F	Not Available	689	Open in IMG/M
3300005290\|Ga0065712_10125147	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1589	Open in IMG/M
3300005293\|Ga0065715_10677783	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	664	Open in IMG/M
3300005329\|Ga0070683_100120473	All Organisms → cellular organisms → Bacteria	2478	Open in IMG/M
3300005329\|Ga0070683_100465448	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	1207	Open in IMG/M
3300005330\|Ga0070690_100916651	Not Available	686	Open in IMG/M
3300005331\|Ga0070670_100003925	All Organisms → cellular organisms → Bacteria	12406	Open in IMG/M
3300005332\|Ga0066388_108537876	Not Available	510	Open in IMG/M
3300005334\|Ga0068869_100002421	All Organisms → cellular organisms → Bacteria	11248	Open in IMG/M
3300005335\|Ga0070666_10280650	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1184	Open in IMG/M
3300005338\|Ga0068868_100013011	All Organisms → cellular organisms → Bacteria	6090	Open in IMG/M
3300005341\|Ga0070691_10136508	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1247	Open in IMG/M
3300005364\|Ga0070673_100388127	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1246	Open in IMG/M
3300005364\|Ga0070673_102154366	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005365\|Ga0070688_100326588	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1116	Open in IMG/M
3300005436\|Ga0070713_100055853	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3283	Open in IMG/M
3300005440\|Ga0070705_100069214	All Organisms → cellular organisms → Bacteria	2127	Open in IMG/M
3300005441\|Ga0070700_101503532	Not Available	572	Open in IMG/M
3300005444\|Ga0070694_100489230	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	977	Open in IMG/M
3300005456\|Ga0070678_100149193	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300005456\|Ga0070678_100352948	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1265	Open in IMG/M
3300005535\|Ga0070684_100064498	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	3213	Open in IMG/M
3300005535\|Ga0070684_100101317	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2573	Open in IMG/M
3300005539\|Ga0068853_101213326	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	728	Open in IMG/M
3300005544\|Ga0070686_100301375	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1189	Open in IMG/M
3300005545\|Ga0070695_100068915	All Organisms → cellular organisms → Bacteria	2311	Open in IMG/M
3300005563\|Ga0068855_100090675	All Organisms → cellular organisms → Bacteria	3527	Open in IMG/M
3300005564\|Ga0070664_101560284	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	625	Open in IMG/M
3300005614\|Ga0068856_101207938	Not Available	772	Open in IMG/M
3300005617\|Ga0068859_100200127	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	2082	Open in IMG/M
3300005618\|Ga0068864_100072774	All Organisms → cellular organisms → Bacteria	2996	Open in IMG/M
3300005834\|Ga0068851_10777298	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	594	Open in IMG/M
3300005841\|Ga0068863_100003696	All Organisms → cellular organisms → Bacteria	15124	Open in IMG/M
3300005842\|Ga0068858_100009194	All Organisms → cellular organisms → Bacteria	9443	Open in IMG/M
3300005842\|Ga0068858_100749765	Not Available	951	Open in IMG/M
3300006163\|Ga0070715_10046693	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1842	Open in IMG/M
3300006358\|Ga0068871_100035697	All Organisms → cellular organisms → Bacteria	3952	Open in IMG/M
3300006871\|Ga0075434_100176280	All Organisms → cellular organisms → Bacteria	2158	Open in IMG/M
3300006903\|Ga0075426_10889813	Not Available	671	Open in IMG/M
3300006969\|Ga0075419_10469737	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	870	Open in IMG/M
3300009092\|Ga0105250_10481844	Not Available	561	Open in IMG/M
3300009093\|Ga0105240_10573369	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1246	Open in IMG/M
3300009093\|Ga0105240_10777783	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1038	Open in IMG/M
3300009093\|Ga0105240_11204792	All Organisms → cellular organisms → Bacteria → FCB group	802	Open in IMG/M
3300009098\|Ga0105245_10635789	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1096	Open in IMG/M
3300009098\|Ga0105245_12792238	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	541	Open in IMG/M
3300009174\|Ga0105241_11384328	Not Available	673	Open in IMG/M
3300009176\|Ga0105242_10530859	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300009551\|Ga0105238_10630994	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1081	Open in IMG/M
3300009551\|Ga0105238_12432089	Not Available	559	Open in IMG/M
3300009553\|Ga0105249_10435623	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1347	Open in IMG/M
3300010373\|Ga0134128_10009085	All Organisms → cellular organisms → Bacteria	11952	Open in IMG/M
3300010375\|Ga0105239_10079580	All Organisms → cellular organisms → Bacteria	3606	Open in IMG/M
3300010375\|Ga0105239_10475987	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1418	Open in IMG/M
3300010375\|Ga0105239_11997093	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	673	Open in IMG/M
3300010397\|Ga0134124_10049841	All Organisms → cellular organisms → Bacteria	3518	Open in IMG/M
3300010401\|Ga0134121_10687561	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	969	Open in IMG/M
3300012906\|Ga0157295_10321043	Not Available	549	Open in IMG/M
3300012957\|Ga0164303_10823278	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300012986\|Ga0164304_10573811	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300012987\|Ga0164307_10818153	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	742	Open in IMG/M
3300013100\|Ga0157373_11371297	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300013104\|Ga0157370_10664222	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	952	Open in IMG/M
3300013105\|Ga0157369_11481693	Not Available	690	Open in IMG/M
3300013306\|Ga0163162_10951383	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	970	Open in IMG/M
3300013306\|Ga0163162_11228751	Not Available	851	Open in IMG/M
3300013307\|Ga0157372_10011432	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	9438	Open in IMG/M
3300013307\|Ga0157372_10014548	All Organisms → cellular organisms → Bacteria	8418	Open in IMG/M
3300013308\|Ga0157375_10007646	All Organisms → cellular organisms → Bacteria	9455	Open in IMG/M
3300013308\|Ga0157375_11592797	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	772	Open in IMG/M
3300013308\|Ga0157375_13472489	Not Available	525	Open in IMG/M
3300014968\|Ga0157379_12430585	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300015200\|Ga0173480_10239010	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	983	Open in IMG/M
3300015371\|Ga0132258_10191281	All Organisms → cellular organisms → Bacteria	4957	Open in IMG/M
3300015371\|Ga0132258_11220346	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1901	Open in IMG/M
3300015373\|Ga0132257_100513362	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1472	Open in IMG/M
3300015373\|Ga0132257_100884301	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1119	Open in IMG/M
3300019361\|Ga0173482_10147868	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	912	Open in IMG/M
3300022883\|Ga0247786_1013325	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1524	Open in IMG/M
3300022898\|Ga0247745_1032046	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	787	Open in IMG/M
3300023077\|Ga0247802_1035943	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	747	Open in IMG/M
3300024055\|Ga0247794_10003340	All Organisms → cellular organisms → Bacteria	3316	Open in IMG/M
3300025898\|Ga0207692_10746362	Not Available	638	Open in IMG/M
3300025908\|Ga0207643_10079837	All Organisms → cellular organisms → Bacteria	1894	Open in IMG/M
3300025912\|Ga0207707_10012275	All Organisms → cellular organisms → Bacteria	7447	Open in IMG/M
3300025913\|Ga0207695_11243041	Not Available	625	Open in IMG/M
3300025917\|Ga0207660_10004310	All Organisms → cellular organisms → Bacteria	9276	Open in IMG/M
3300025919\|Ga0207657_10030137	All Organisms → cellular organisms → Bacteria	4929	Open in IMG/M
3300025920\|Ga0207649_10003877	All Organisms → cellular organisms → Bacteria	8155	Open in IMG/M
3300025921\|Ga0207652_10009788	All Organisms → cellular organisms → Bacteria	7715	Open in IMG/M
3300025924\|Ga0207694_11567747	Not Available	555	Open in IMG/M
3300025925\|Ga0207650_10012117	All Organisms → cellular organisms → Bacteria	5944	Open in IMG/M
3300025927\|Ga0207687_10142653	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1819	Open in IMG/M
3300025928\|Ga0207700_10715172	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	894	Open in IMG/M
3300025930\|Ga0207701_10664814	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	884	Open in IMG/M
3300025930\|Ga0207701_10821066	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	782	Open in IMG/M
3300025931\|Ga0207644_11202954	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300025932\|Ga0207690_10026507	All Organisms → cellular organisms → Bacteria	3649	Open in IMG/M
3300025934\|Ga0207686_10006537	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	6276	Open in IMG/M
3300025934\|Ga0207686_11151248	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300025944\|Ga0207661_10001843	All Organisms → cellular organisms → Bacteria	14496	Open in IMG/M
3300025944\|Ga0207661_11310287	Not Available	665	Open in IMG/M
3300025945\|Ga0207679_10007883	All Organisms → cellular organisms → Bacteria	6766	Open in IMG/M
3300025960\|Ga0207651_10194010	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1622	Open in IMG/M
3300025961\|Ga0207712_10839727	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	809	Open in IMG/M
3300026035\|Ga0207703_10223341	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1685	Open in IMG/M
3300026121\|Ga0207683_10178200	All Organisms → cellular organisms → Bacteria	1927	Open in IMG/M
3300026786\|Ga0207497_100980	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	783	Open in IMG/M
3300026952\|Ga0207434_1010732	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	720	Open in IMG/M
3300027122\|Ga0207538_1001664	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1120	Open in IMG/M
3300027403\|Ga0207609_102163	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300031716\|Ga0310813_10003806	All Organisms → cellular organisms → Bacteria	9208	Open in IMG/M
3300032421\|Ga0310812_10002088	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6453	Open in IMG/M
3300032421\|Ga0310812_10347763	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	663	Open in IMG/M
3300033475\|Ga0310811_10283464	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	1926	Open in IMG/M
3300034819\|Ga0373958_0082575	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	60.34%
Environmental	Environmental	38.79%
Engineered	Engineered	0.86%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	60.34%
Terrestrial	Environmental → Terrestrial	38.79%
Solid Waste	Engineered → Solid Waste	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	38.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	38.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.69%
Roots	Host-Associated → Plants → Roots	0.86%
Grass	Engineered → Solid Waste → Grass	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	27.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.83%
Loam	Environmental → Terrestrial → Soil → Loam	18.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.17%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.59%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.86%
Composting	Engineered → Solid Waste → Grass → Composting	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	27.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.21%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.86%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.86%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	9.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	7.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.45%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.59%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.86%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026786	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A5a-11 (SPAdes)	Environmental	Open in IMG/M
3300026952	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-10 (SPAdes)	Environmental	Open in IMG/M
3300027122	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-11 (SPAdes)	Environmental	Open in IMG/M
3300027403	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A5-11 (SPAdes)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_01008150	2170459016	Switchgrass, Maize And Mischanthus Litter	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKELGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVRHHCATLLEDAER
Ga0065712_101251472	3300005290	Miscanthus Rhizosphere	MSHGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKELGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVRHHCATLLEDAERCVHEVFAAASARQDGMAALG*
Ga0065715_106777831	3300005293	Miscanthus Rhizosphere	GVVETPSMCRGRTMSHGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKELGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSVMPFNVRHHCATLLEDAERCVHEVFAAASARQDGMAALG*
Ga0070683_1001204732	3300005329	Corn Rhizosphere	MSQGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLTHSGEGHSISAPG*
Ga0070683_1004654482	3300005329	Corn Rhizosphere	MPHGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKDAARVSDAERDALRSGFLDLVRRYVVHLRDEGEAEARVGDRLREALDDSLMPCSVRHHCA
Ga0070690_1009166511	3300005330	Switchgrass Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKELGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVHHHCATLLEDAERCVREVFAAAPSRQDGIAALG*
Ga0070670_10000392511	3300005331	Switchgrass Rhizosphere	MSQGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPARAAARLRDELDDSLMPFSVRHHCSALIDEAETSVREVFTSTLTHSGEGHSISAPGR*
Ga0066388_1085378761	3300005332	Tropical Forest Soil	TCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKDLARVSDAERDALRNGFLALVRRYVVLLRDDGEPEARIMIRLREELDDSLMPCNVMHHCAKAVSDAERCVVEVLRPALNLTETFVRVQRQTPA*
Ga0068869_1000024214	3300005334	Miscanthus Rhizosphere	MSQGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLMHSGEGHSISAPG*
Ga0070666_102806502	3300005335	Switchgrass Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTL
Ga0068868_1000130117	3300005338	Miscanthus Rhizosphere	MSQGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLTHSGEGHSISAPGR*
Ga0070691_101365082	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLTHSGEGHSISAPGR*
Ga0070673_1003881272	3300005364	Switchgrass Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKELGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVRHHCATLLEDAERCVHEVFAAASPRQDGMAALG*
Ga0070673_1021543662	3300005364	Switchgrass Rhizosphere	LMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLMHSGEGHSISAPG*
Ga0070688_1003265882	3300005365	Switchgrass Rhizosphere	GVVETPSMCRGRTMSHGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKELGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVRHHCATLLEDAERCVHEVFAAASARQDGMAALG*
Ga0070713_1000558532	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTRTLAIRSPGATHAMSHGMLGDRRPVSQLHSADDLPELMRRAMRSLARAEELAKDSARVEDVECDALRSGFLGLVRRYVVHLHDKGETKASAVAHLHEELDDSLMPFSVRHHCEMLIAQAERSVTDWWPV*
Ga0070705_1000692143	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSQGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPARAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLMHSGEGHSISAPG*
Ga0070700_1015035321	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKDLVRVSDAEREALRAGFLALVRRYVVQLRDDGEPQSRVAARVREELDDSLMPFSVRHHCSALIDEAERSVAEVFAATLTHSDTSH*
Ga0070694_1004892302	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLMHSGEGHSISAPG*
Ga0070678_1001491932	3300005456	Miscanthus Rhizosphere	MSQGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDIERESLRAGFLALVRRYVLQLREEGEQPARVAARLRDELDDSLMPFSVRHHCSALIEEAEKSVGEVFASTLSPSGASH*
Ga0070678_1003529482	3300005456	Miscanthus Rhizosphere	ELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLTHSGEGHSISAPGR*
Ga0070684_1000644984	3300005535	Corn Rhizosphere	MSHGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKELGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSVMPFNVRHHCATLLEDAERCVHEVFAAASARQDGMAALG*
Ga0070684_1001013172	3300005535	Corn Rhizosphere	MRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLMHSGEGHSISAPG*
Ga0068853_1012133262	3300005539	Corn Rhizosphere	MSQGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSV
Ga0070686_1003013752	3300005544	Switchgrass Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLTHSGEGHSISAPG*
Ga0070695_1000689151	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSQGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAETSVREVFTSTLTHSGEGHSISAPGR*
Ga0068855_1000906754	3300005563	Corn Rhizosphere	MRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPARAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLMHSGEGHSISAPG*
Ga0070664_1015602842	3300005564	Corn Rhizosphere	HGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKEIGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVRHHCATLLEDAERCVHEVFAAASARQDGMAALG*
Ga0068856_1012079381	3300005614	Corn Rhizosphere	MSHGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKELGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVRHHCATLLED
Ga0068859_1002001273	3300005617	Switchgrass Rhizosphere	MRRAMRSLVRAEELAKELGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVRHHCATLLEDAERCVHEVFAAASARQDGMAALG*
Ga0068864_1000727744	3300005618	Switchgrass Rhizosphere	MSHGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKELGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVRHHCATLLEDAERCVHEVFAAASPRQDGMAALG*
Ga0068851_107772982	3300005834	Corn Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVRE
Ga0068863_1000036964	3300005841	Switchgrass Rhizosphere	MRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLTHSGEGHSISAPGR*
Ga0068858_1000091941	3300005842	Switchgrass Rhizosphere	MRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTL
Ga0068858_1007497652	3300005842	Switchgrass Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKELGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVRHHCATLLEDAERCVHEVFAAASARQDGMAALG*
Ga0070715_100466932	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSHGMCGDRRPVSPLHAADDLPELMRRALRSLVRAEELARDLEGESSAGRDALRSGFLVLVRRYAVHLRDAGERKGRVTDRLREELDDSLMPCNVRHHGAMHFEAAERCVAEVYSSELTTHGA*
Ga0068871_1000356971	3300006358	Miscanthus Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPARAAARLRDELDDSLMPFSVRHHCSALIDEAETSVREVFTSTLTHSGEGHSISAPGR*
Ga0075434_1001762801	3300006871	Populus Rhizosphere	MSHGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKEIGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACIANRLREELDDSLMPFNVRHHCATLLEDAERCVHEVFAAAPVRQDGMTALG*
Ga0075426_108898132	3300006903	Populus Rhizosphere	MSHGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKEIGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACIANRLREELDDSLMPFNVRHHCATLLEDAERCVHEVFAAAPVRQDGM
Ga0075419_104697372	3300006969	Populus Rhizosphere	MRPMSHGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKDLVRVSDAEREALRAGFLALVRRYVVQLRDDGEPQSRVAARVREELDDSLMPFSVRHHCSALIDEAERSVAEVFAATLTHSDTSH*
Ga0105250_104818442	3300009092	Switchgrass Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKELGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVHHHCATLLEDAERCVHEVFAAAPARQDGMTALG*
Ga0105240_105733692	3300009093	Corn Rhizosphere	MLGDRRPVSQLHSADDLPELMRRALRSLARAEELATDSVRVEDVDRDALRSGFLGLVRRYVVQLREEGETEANAVAHLHEELDDSLMPFSVRHHCEMLIAQAERSVAEVFALRSTK*
Ga0105240_107777832	3300009093	Corn Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAETSVREVFTSTLTHSGEGHSISAPGR*
Ga0105240_112047921	3300009093	Corn Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKDAARVSDAERDALRSGFLDLVRRYVVHLRDEGEAEARVADRLREALDDSLMPCSVRHHCATILMDAERCVAEFFAAPPSPPGAFPH*
Ga0105245_106357892	3300009098	Miscanthus Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKDLVRVSDAEREALRAGFLALVRRYVVQLHDDGEPQSRVAARVREELDDSLMPFSVRHHCSALIDEAERSVAEVFAATLTHSDTSH*
Ga0105245_127922381	3300009098	Miscanthus Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDIERESLRAGFLALVRRYVLQLREEGEQPARVAARLRDELDDSLMPFSVRHHCSALIDEAETSVREVFTSTLTHSGEGHSISAPGR*
Ga0105241_113843281	3300009174	Corn Rhizosphere	MLGDRRPVSQLHSADDLPELMRRAMRSLVRAEELARDSAAVSNAECEALRSGFLGLVRRYVTQLREEGETEARAIDQLRAELDDTLMPFSVRHHCDALVEQA
Ga0105242_105308592	3300009176	Miscanthus Rhizosphere	EELARDLARVSDIERESLRAGFLALVRRYVLQLREEGEQPARVAARLRDELDDSLMPFSVRHHCSALIEEAEKSVGEVFASTLSPSGASH*
Ga0105238_106309941	3300009551	Corn Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKDAARVSDAERDALRSGFLDLVRRYVVHLRDEGEAEARVADRLREALDDSLMPCSVRHHCATILMDAERCVAEFFAAPPSPP
Ga0105238_124320891	3300009551	Corn Rhizosphere	MLGDRRPVSQLHSADDLPELMRRALRSLARAEELATDSVRVEDVDRDALRSGFLGLVRRYVVQLREEGETEANAVAHLHEELDDSLMPFSVRHHCEMLIAQAERSVAEVLALRSTK*
Ga0105249_104356232	3300009553	Switchgrass Rhizosphere	MCGDRRPVSQLHSADEVPELMRRAMRSFVRAEELAKDLGRVTDAERDALRSGFLALVRRFVIHLHDEGEPEARVVSRLHEELDESLMPCSVHHHCAILLEDAEACVPEIFAIATE*
Ga0134128_1000908511	3300010373	Terrestrial Soil	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPARAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLTHSGEGHSISAPGR*
Ga0105239_100795801	3300010375	Corn Rhizosphere	RPVSQLHSADDVPELMRRAMRSLVRDEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAETSVREVFTSTLTHSGEGHSISAPGR*
Ga0105239_104759872	3300010375	Corn Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKEIGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVRHHCATLLEDAERCVHEVFAAAPARQDGMAALG*
Ga0105239_119970932	3300010375	Corn Rhizosphere	RPVSQLHSADDVPELMRRAMRSLVRAEELAKDAARVSDAERDALRSGFLDLVRRYVVHLRDEGEAEARVGDRLREALDDSLMPCSVRHHCATILMDAERCVAEFFAAPPSPPGAFLH*
Ga0134124_100498411	3300010397	Terrestrial Soil	ADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAETSVREVFTSTLTHSGEGPSISAPGR*
Ga0134121_106875612	3300010401	Terrestrial Soil	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDIERESLRAGFLALVRRYVLQLREEGEQPARVAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLTHSGEGHSISAPGR*
Ga0157295_103210432	3300012906	Soil	DLARVSDVERESLHAGLLALVRRYVLQLREEGEQPARAAARLRDELDDSLMPFSVRHHCSALIDEAETSVREVFTSTLTHSGEGHSISAPGR*
Ga0164303_108232782	3300012957	Soil	DDVPELMRRAMRSLVRAEELARDLSRVSDVERESLHAGFLALVRRYALQLREEGEQPARAAARLRDELDDSLMPFSVRHHCSTLIDEAEKSVREVFTSTLTHSGGGHSISGPGRSW*
Ga0164304_105738112	3300012986	Soil	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKELGRVSDTERDTLHAGFLALVRRYVVHLRDDGNEQARVANRLREELDDSLMPFNVRHHCATLLEDAERCVREVFAAAPARQDDIAALG*
Ga0164307_108181532	3300012987	Soil	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYALQLREEGEQPARAAARLRDELDDSLMPFSVRHHCSTLIDEAEKSVREVFTSTLTHSGGGHSISGPGRSW*
Ga0157373_113712971	3300013100	Corn Rhizosphere	DRRPVSQLHSADDVPELMRRAMRSLVRAEELAKDAARVSDAERDALRSGFLDLVRRYVVHLRDEGEAEARVADRLREALDDSLMPCSVRHHCATILMDAERCVAEFFAAPPSPPGAFPH*
Ga0157370_106642221	3300013104	Corn Rhizosphere	VDDLPELMRRAMRSRVRAEELARDSAAVSNAECEALRSGFLGLVRRYVTQPREEGETEARAIDQLRAELDDTLMPFSVRHHCDALVEQAERSVPEV
Ga0157369_114816931	3300013105	Corn Rhizosphere	MLGDRRPVSQVHSADDLPELMRRAMRSLVRAEELARDSVAVSNAECEALRSGFLGLVRRYVTQLREEGETEARAIDQLRAELDDTLMPFSVRHHCDALVEQAERSVPEVFARHPAE*
Ga0163162_109513832	3300013306	Switchgrass Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKDLVRVSDAEREALRAGFLALVRRYVVQLRDDGEPQSRVAARVREELDDSLMPFSVRHHCSALIDEAE
Ga0163162_112287511	3300013306	Switchgrass Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKEIGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVHHHCATLLEDAERCVHEVFAAAS
Ga0157372_100114321	3300013307	Corn Rhizosphere	MLGDRRPVSQVHSADDLPELMRRAMRSLVRAEELARDSAAVSNAECEELRSGFLGLIRRYVTQLREEGETEARAIDQLRAELDDTLMPFSVRHHCDALVEQAERSVPEVFACHRA
Ga0157372_100145483	3300013307	Corn Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKDAARVSDAERDALRSGFLDLVRRYVVHLRDEGEAEARVGDRLREALDDSLMPCSVRHHCATILMDAERCVAEFFAAPPSPPGAFPH*
Ga0157375_100076468	3300013308	Miscanthus Rhizosphere	MCGDRRPVSQLHSADEVPELMRRAMRSFVRAEELAKDLGRVTDAERDALRSGFLALVRRFVIHLHDEGEPEARVVGRLHEELDESLMPCSVHHHCAILLEDAEACVPEIFAIADGVATL*
Ga0157375_115927972	3300013308	Miscanthus Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLT
Ga0157375_134724891	3300013308	Miscanthus Rhizosphere	MRRAMRSLVRAEELAKEIGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVRHHCATLLEDAERCVHEVFAAAPARQDGMTALG*
Ga0157379_124305851	3300014968	Switchgrass Rhizosphere	PELMRRAMRSLVRAEELAKELGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVRHHCATLLEDAERCVHEVFAAASARQDGMAALG*
Ga0173480_102390101	3300015200	Soil	SADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVGRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAETSVREVFTSTLTHSGEGHSISAPGR*
Ga0132258_101912816	3300015371	Arabidopsis Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDHARVSDIERESLHAGFLALVRRYVLQLREEGEQPARVTARLRDELDDSLMPFSVRHHCSALIEEAEKSVAEVFASTLSPSGASH*
Ga0132258_112203463	3300015371	Arabidopsis Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKDLGRVTDAERDALRSGFLALVRRYVIHLHDEGEPEARVVGRLREALDESLMPCSVHHHCAILLEDAEACIPEVFAAADGVATL*
Ga0132257_1005133623	3300015373	Arabidopsis Rhizosphere	VPELMRRAMRSLVRAEELAKDLGRVSDTERDALRSGFLALVRRYVVHLRDEGAQQTCATSRLREELDDSLMPFSVRHHYAMLLEDAERCVADVFAPAPAPPDVAALR*
Ga0132257_1008843012	3300015373	Arabidopsis Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKDLVRVSDAEREALRAGFLALVRRYVVQLRDDGEPQSRVATRVREELDDSLMPFSARHHCSALIDEAERSVAEVFAATLTHSDASR*
Ga0173482_101478682	3300019361	Soil	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPARAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLTHSGEGHSISAPGR
Ga0247786_10133252	3300022883	Soil	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLTHSGEGHSISAPGR
Ga0247745_10320462	3300022898	Soil	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVRAVF
Ga0247802_10359431	3300023077	Soil	RRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLMHSGEGHSISAPGR
Ga0247794_100033406	3300024055	Soil	SLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAETSVREVFTSTLTHSGEGHSISAPGR
Ga0207692_107463622	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTRTLAIRSPGATHAMSHGMLGDRRPVSQLHSADDLPELMRRAMRSLARAEELAKDSARVEDVECDALRSGFLGLVRRYVVHLHDKGETKASAVAHLHEELDDSLMPFSVRHHCEMLIAQAERS
Ga0207643_100798373	3300025908	Miscanthus Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVR
Ga0207707_100122759	3300025912	Corn Rhizosphere	MRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLMHSGEGHSISAPGR
Ga0207695_112430412	3300025913	Corn Rhizosphere	MLGDRRPVSQLHSADDLPELMRRAMRSLVRAEELARDSAAVSNAECEALRSGFLWLVRRYVTQLREEGETEARAIDQLRAELDDTLMPFSVRHHCDALVEQAERSVP
Ga0207660_100043106	3300025917	Corn Rhizosphere	MRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLTHSGEGHSISAPGR
Ga0207657_100301375	3300025919	Corn Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLMHSGEGHSISAPG
Ga0207649_100038774	3300025920	Corn Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAETSVREVFTSTLTHSGEGHSISAPGR
Ga0207652_100097882	3300025921	Corn Rhizosphere	MRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLMHSGEGHSISAPG
Ga0207694_115677471	3300025924	Corn Rhizosphere	MTRTLAICSPVATHAMSHGMLGDRRPVSQLHSADDLPELMRRALRSLARAEELATDSVRVEDVDRDALRSGFLGLVRRYVVQLREEGETEANAVAHLHEELDDSLMPFSVRHHCEMLIAQAERSVAEVFALRSTK
Ga0207650_100121172	3300025925	Switchgrass Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPARAAARLRDELDDSLMPFSVRHHCSALIDEAETSVREVFTSTLTHSGEGHSISAPGR
Ga0207687_101426534	3300025927	Miscanthus Rhizosphere	RAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPARAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLMHSGEGHSISAPG
Ga0207700_107151721	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTRTLAIRSPGATHAMSHGMLGDRRPVSQLHSADDLPELMRRAMRSLARAEELAKDSARVEDVECDALRSGFLGLVRRYVVHLHDKGETKASAVAHLHEELDDSLMPFSVRHH
Ga0207701_106648142	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MSHGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKDLVRVSDAEREALRAGFLALVRRYVVQLRDDGEPQSRVAARVREELDDSLMPFSVRHHCSALIDEAERSVAEVFAATLT
Ga0207701_108210661	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MSHGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKEIGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVHHHCATLLEDAERCVHEVFAAASPRQDGMAALG
Ga0207644_112029542	3300025931	Switchgrass Rhizosphere	RAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLMHSGEGHSISDPG
Ga0207690_100265076	3300025932	Corn Rhizosphere	MRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAETSVREVFTSTLTHSGEGHSISAPGR
Ga0207686_100065373	3300025934	Miscanthus Rhizosphere	MSYGMCGDRRPVSQLHSADEVPELMRRAMRSFVRAEELAKDLGRVTDAERDALRSGFLALVRRFVIHLHDEGEPEARVVGRLHEELDESLMPCSVHHHCAILLEDAEACVPEIFAIADRVATL
Ga0207686_111512481	3300025934	Miscanthus Rhizosphere	DDVPELMRRAMRSLVRAEELARDLARVSDIERESLRAGFLALVRRYVLQLREEGEQPARVAARLRDELDDSLMPFSVRHHCSALIEEAEKSVGEVFASTLSPSGASH
Ga0207661_1000184310	3300025944	Corn Rhizosphere	MRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLTHSGEGHSISAPG
Ga0207661_113102871	3300025944	Corn Rhizosphere	MSHGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKELGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVRHHCATLLEDAERCVHEVFAAASPRQDGMAALG
Ga0207679_100078835	3300025945	Corn Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLTHSGEGHSISAPG
Ga0207651_101940104	3300025960	Switchgrass Rhizosphere	LMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLMHSGEGHSISAPG
Ga0207712_108397272	3300025961	Switchgrass Rhizosphere	MCGDRRPVSQLHSADEVPELMRRAMRSFVRAEELAKDLGRVTDAERDALRSGFLALVRRFVIHLHDEGEPEARVVSRLHEELDESLMPCSVHHHCAILLEDAEACVPEIFAIATE
Ga0207703_102233411	3300026035	Switchgrass Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLTHSGEGHS
Ga0207683_101782002	3300026121	Miscanthus Rhizosphere	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDIERESLRAGFLALVRRYVLQLREEGEQPARVAARLRDELDDSLMPFSVRHHCSALIEEAEKSVGEVFASTLSPSGAS
Ga0207497_1009802	3300026786	Soil	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAETSVR
Ga0207434_10107321	3300026952	Soil	MSQGMCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAETSVREVFTSTLTHSGEGHSISAPGR
Ga0207538_10016641	3300027122	Soil	AEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLMHSGEGHSISAPGR
Ga0207609_1021632	3300027403	Soil	RAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVFTSTLMHSGEGHSISAPG
Ga0310813_100038068	3300031716	Soil	MRRAMRSLVRAEELAKELGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVRHHCATLLEDAERCVHEVFAAASPRQDGMAALG
Ga0310812_100020888	3300032421	Soil	MRRAMRSLVRAEELAKELGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVRHHCATLLEDAERCVHEVFAAASARQDGMAALG
Ga0310812_103477632	3300032421	Soil	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELARDLARVSDVERESLHAGFLALVRRYVLQLREEGEQPTRAAARLRDELDDSLMPFSVRHHCSALIDEAEKSVREVF
Ga0310811_102834642	3300033475	Soil	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKELGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACVANRLREELDDSLMPFNVRHHCATLLEDAERCVHEVFAAASARQDGMAALG
Ga0373958_0082575_207_581	3300034819	Rhizosphere Soil	MCGDRRPVSQLHSADDVPELMRRAMRSLVRAEELAKEIGRVSDTERDTLHVGFLALVRRYVVHLRDDGNEPACIANRLREELDDSLMPFNVRHHCATLLEDAERCVHEVFAAAPARQDGMTALG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079285

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences