Metagenome / Metatranscriptome Family F044132

Basic Information
Family ID	F044132
Family Type	Metagenome / Metatranscriptome
Number of Sequences	155
Average Sequence Length	62 residues
Representative Sequence	PAAAPDRMAPVSRFGNENGQTTIKQGNGTFQFGGQQSFGQRYNTDNIFNPYARDGR
Number of Associated Samples	139
Number of Associated Scaffolds	155

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.97 %
% of genes near scaffold ends (potentially truncated)	61.94 %
% of genes from short scaffolds (< 2000 bps)	59.35 %
Associated GOLD sequencing projects	133
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Most Common Taxonomy
Group	Unclassified (50.323 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.032 % of family members)
Environment Ontology (ENVO)	Unclassified (33.548 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.290 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.71% β-sheet: 14.29% Coil/Unstructured: 75.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 155 Family Scaffolds
PF00378	ECH_1	75.48
PF13193	AMP-binding_C	10.32
PF10604	Polyketide_cyc2	4.52
PF03401	TctC	1.29
PF13091	PLDc_2	1.29
PF13356	Arm-DNA-bind_3	0.65
PF13505	OMP_b-brl	0.65
PF05190	MutS_IV	0.65
PF13489	Methyltransf_23	0.65

COG ID	Name	Functional Category	% Frequency in 155 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.29
COG0249	DNA mismatch repair ATPase MutS	Replication, recombination and repair [L]	0.65

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.32 %
All Organisms	root	All Organisms	49.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.32 %
cellular organisms	root	All Organisms → cellular organisms	49.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.32 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.35 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.32 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.00 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.32 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.35 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.32 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	4.52 %
Stappiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae	2.58 %
Alsobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae	0.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.65 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.32 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	4.52 %
Pseudovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Pseudovibrio	2.58 %
Alsobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter	0.65 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.32 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	3.23 %
Pseudovibrio hongkongensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Pseudovibrio → Pseudovibrio hongkongensis	2.58 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	1.29 %
unclassified Alsobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → unclassified Alsobacter	0.65 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	0.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.32 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	3.23 %
Pseudovibrio hongkongensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Pseudovibrio → Pseudovibrio hongkongensis	2.58 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.65 %
Alsobacter sp. SYSU M60028	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → unclassified Alsobacter → Alsobacter sp. SYSU M60028	0.65 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.65 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	0.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0833162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Pseudovibrio → Pseudovibrio hongkongensis	575	Open in IMG/M
3300000156\|NODE_c0720556	All Organisms → cellular organisms → Bacteria → Proteobacteria	5849	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1019761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1271	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1055636	All Organisms → cellular organisms → Bacteria → Proteobacteria	703	Open in IMG/M
3300000956\|JGI10216J12902_112802881	Not Available	1127	Open in IMG/M
3300001979\|JGI24740J21852_10057359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1088	Open in IMG/M
3300003911\|JGI25405J52794_10086558	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300004020\|Ga0055440_10006092	All Organisms → cellular organisms → Bacteria	2028	Open in IMG/M
3300004114\|Ga0062593_101447246	All Organisms → cellular organisms → Bacteria → Proteobacteria	737	Open in IMG/M
3300004643\|Ga0062591_100468038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1070	Open in IMG/M
3300005173\|Ga0066822_1000798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1250	Open in IMG/M
3300005332\|Ga0066388_100686004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1634	Open in IMG/M
3300005337\|Ga0070682_100088545	All Organisms → cellular organisms → Bacteria	2020	Open in IMG/M
3300005366\|Ga0070659_101710284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	563	Open in IMG/M
3300005367\|Ga0070667_102369996	Not Available	500	Open in IMG/M
3300005436\|Ga0070713_100990443	All Organisms → cellular organisms → Bacteria → Proteobacteria	811	Open in IMG/M
3300005445\|Ga0070708_100545204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → unclassified Alsobacter → Alsobacter sp. SYSU M60028	1094	Open in IMG/M
3300005459\|Ga0068867_100341664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1246	Open in IMG/M
3300005507\|Ga0074259_11701535	All Organisms → cellular organisms → Bacteria → Proteobacteria	754	Open in IMG/M
3300005530\|Ga0070679_100802161	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300005535\|Ga0070684_101293724	All Organisms → cellular organisms → Bacteria → Proteobacteria	686	Open in IMG/M
3300005617\|Ga0068859_101237843	All Organisms → cellular organisms → Bacteria → Proteobacteria	822	Open in IMG/M
3300005713\|Ga0066905_101375230	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300005834\|Ga0068851_10495784	All Organisms → cellular organisms → Bacteria → Proteobacteria	732	Open in IMG/M
3300005834\|Ga0068851_10497769	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300006172\|Ga0075018_10195916	Not Available	956	Open in IMG/M
3300006358\|Ga0068871_100173364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1850	Open in IMG/M
3300006577\|Ga0074050_10107722	Not Available	575	Open in IMG/M
3300006755\|Ga0079222_11190348	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
3300006881\|Ga0068865_100020616	All Organisms → cellular organisms → Bacteria → Proteobacteria	4276	Open in IMG/M
3300006904\|Ga0075424_101652609	All Organisms → cellular organisms → Bacteria → Proteobacteria	679	Open in IMG/M
3300007076\|Ga0075435_102044963	Not Available	503	Open in IMG/M
3300010043\|Ga0126380_10638121	All Organisms → cellular organisms → Bacteria → Proteobacteria	845	Open in IMG/M
3300010046\|Ga0126384_10815738	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300010359\|Ga0126376_11477007	All Organisms → cellular organisms → Bacteria → Proteobacteria	707	Open in IMG/M
3300010359\|Ga0126376_11987380	Not Available	623	Open in IMG/M
3300010361\|Ga0126378_12449837	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300011106\|Ga0151489_1572607	All Organisms → cellular organisms → Bacteria → Proteobacteria	656	Open in IMG/M
3300011119\|Ga0105246_10038686	All Organisms → cellular organisms → Bacteria → Proteobacteria	3209	Open in IMG/M
3300011119\|Ga0105246_12211163	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300012490\|Ga0157322_1017014	All Organisms → cellular organisms → Bacteria → Proteobacteria	663	Open in IMG/M
3300012494\|Ga0157341_1007690	Not Available	864	Open in IMG/M
3300012510\|Ga0157316_1073281	Not Available	521	Open in IMG/M
3300012908\|Ga0157286_10291496	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300012911\|Ga0157301_10445510	Not Available	512	Open in IMG/M
3300012913\|Ga0157298_10215481	Not Available	627	Open in IMG/M
3300012914\|Ga0157297_10502821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Pseudovibrio → Pseudovibrio hongkongensis	510	Open in IMG/M
3300012931\|Ga0153915_11800575	All Organisms → cellular organisms → Bacteria → Proteobacteria	716	Open in IMG/M
3300012957\|Ga0164303_10381477	Not Available	863	Open in IMG/M
3300012960\|Ga0164301_10808541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	718	Open in IMG/M
3300013102\|Ga0157371_10976951	All Organisms → cellular organisms → Bacteria → Proteobacteria	645	Open in IMG/M
3300013306\|Ga0163162_12748003	Not Available	567	Open in IMG/M
3300014745\|Ga0157377_10896136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	663	Open in IMG/M
3300015372\|Ga0132256_101806790	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300017966\|Ga0187776_11333425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	544	Open in IMG/M
3300017966\|Ga0187776_11396406	Not Available	533	Open in IMG/M
3300017974\|Ga0187777_11261798	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300017993\|Ga0187823_10197590	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300019356\|Ga0173481_10595657	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300020018\|Ga0193721_1031637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1399	Open in IMG/M
3300022892\|Ga0247753_1004242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1391	Open in IMG/M
3300023064\|Ga0247801_1052847	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300023069\|Ga0247751_1006170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1695	Open in IMG/M
3300023102\|Ga0247754_1025576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1309	Open in IMG/M
3300025321\|Ga0207656_10115206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1246	Open in IMG/M
3300025900\|Ga0207710_10156242	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300025903\|Ga0207680_11328107	Not Available	511	Open in IMG/M
3300025907\|Ga0207645_10017858	All Organisms → cellular organisms → Bacteria → Proteobacteria	4678	Open in IMG/M
3300025917\|Ga0207660_11637943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Pseudovibrio → Pseudovibrio hongkongensis	518	Open in IMG/M
3300025921\|Ga0207652_11830112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Pseudovibrio → Pseudovibrio hongkongensis	512	Open in IMG/M
3300025924\|Ga0207694_10051448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3193	Open in IMG/M
3300025932\|Ga0207690_11157772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	645	Open in IMG/M
3300025941\|Ga0207711_10179029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1927	Open in IMG/M
3300025945\|Ga0207679_11346336	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300025960\|Ga0207651_11289966	All Organisms → cellular organisms → Bacteria → Proteobacteria	656	Open in IMG/M
3300025965\|Ga0210090_1055629	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300026067\|Ga0207678_11839456	Not Available	529	Open in IMG/M
3300026142\|Ga0207698_11358300	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300026709\|Ga0207512_101043	All Organisms → cellular organisms → Bacteria → Proteobacteria	698	Open in IMG/M
3300026742\|Ga0207597_101902	Not Available	681	Open in IMG/M
3300026773\|Ga0207566_105232	Not Available	503	Open in IMG/M
3300027036\|Ga0207467_1000199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3198	Open in IMG/M
3300027403\|Ga0207609_104551	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	522	Open in IMG/M
3300027438\|Ga0207564_101010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1129	Open in IMG/M
3300027483\|Ga0207637_1000928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1380	Open in IMG/M
3300027992\|Ga0247750_1012381	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300028787\|Ga0307323_10051439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1452	Open in IMG/M
3300028791\|Ga0307290_10299239	Not Available	589	Open in IMG/M
3300028811\|Ga0307292_10247938	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1134760	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300031765\|Ga0318554_10276575	Not Available	956	Open in IMG/M
3300031892\|Ga0310893_10001307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	5745	Open in IMG/M
3300031946\|Ga0310910_10466060	Not Available	1003	Open in IMG/M
3300032001\|Ga0306922_11159426	Not Available	789	Open in IMG/M
3300032012\|Ga0310902_11069959	Not Available	563	Open in IMG/M
3300032051\|Ga0318532_10059023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1325	Open in IMG/M
3300032075\|Ga0310890_11014768	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300032075\|Ga0310890_11781933	Not Available	512	Open in IMG/M
3300032211\|Ga0310896_10810662	Not Available	537	Open in IMG/M
3300033004\|Ga0335084_10506625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1240	Open in IMG/M
3300033433\|Ga0326726_11318233	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.10%
Host-Associated	Host-Associated	32.26%
Engineered	Engineered	0.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.58%
Plants	Host-Associated → Plants	32.26%
Aquatic	Environmental → Aquatic	4.52%
Solid Waste	Engineered → Solid Waste	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.90%
Marine	Environmental → Aquatic → Marine	2.58%
Freshwater	Environmental → Aquatic → Freshwater	1.29%
Sediment	Environmental → Aquatic → Sediment	0.65%
Peat	Environmental → Terrestrial → Peat	0.65%
Roots	Host-Associated → Plants → Roots	0.65%
Grass	Engineered → Solid Waste → Grass	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.87%
Loam	Environmental → Terrestrial → Soil → Loam	12.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.52%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.58%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.65%
Sand	Environmental → Terrestrial → Soil → Sand	0.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.65%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.65%
Composting	Engineered → Solid Waste → Grass → Composting	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	14.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.03%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.87%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.29%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.65%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.65%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.87%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.58%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.29%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.29%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.29%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.65%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.65%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.65%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.65%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.65%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.65%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.65%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001979	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6	Host-Associated	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005173	Soil and rhizosphere microbial communities from Laval, Canada - mgHMA	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005507	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012490	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.4.old.040610	Host-Associated	Open in IMG/M
3300012494	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610	Host-Associated	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014299	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300023069	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025549	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025965	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026053	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026709	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-E (SPAdes)	Environmental	Open in IMG/M
3300026742	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A5w-12 (SPAdes)	Environmental	Open in IMG/M
3300026752	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A4w-11 (SPAdes)	Environmental	Open in IMG/M
3300026773	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5-11 (SPAdes)	Environmental	Open in IMG/M
3300026792	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3-12 (SPAdes)	Environmental	Open in IMG/M
3300027036	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G07A5-10 (SPAdes)	Environmental	Open in IMG/M
3300027122	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-11 (SPAdes)	Environmental	Open in IMG/M
3300027403	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A5-11 (SPAdes)	Environmental	Open in IMG/M
3300027438	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3a-11 (SPAdes)	Environmental	Open in IMG/M
3300027483	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A1-12 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027992	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S125-311R-5	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033809	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_D	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_08331622	3300000033	Soil	DRMAPVNRFGSENGQTTIKQGNSTLQFGNQQSFGQRYNNENLFNPYAREGR*
NODE_072055610	3300000156	Sugar Cane Bagasse Incubating Bioreactor	GAGFMDLDKPKAPPDRLGTGSKFDSENGMSTMKQGNTTFQFGSQRSFDQRYNTNNLFDPYVREGR*
AF_2010_repII_A100DRAFT_10197613	3300000655	Forest Soil	PPDRMTPVSPFNTDSGQTTYKQGNTTLQFGQQRSFGERFNTENMFNPFTREGR*
AF_2010_repII_A100DRAFT_10556361	3300000655	Forest Soil	KPAAPPDRLGTGSQFGSENGQTTMKQGNTTFQFGQQRSFDQRYNTNNLFDPYAREGR*
JGI11615J12901_100636671	3300000953	Soil	AGFMDLDKPAAPPDRLAPVNRFGTDSSGQTTYKSGSGTFQFGQQRSFDQRYNTENIFNPYARDGR*
JGI10216J12902_1128028813	3300000956	Soil	GGGQGFLDLDKPAAPPDRLAPVSRFGNESGQTTFNLGNSTFRFGQQSSFSERYNSKNLFDPYAREGR*
JGI24740J21852_100573593	3300001979	Corn Rhizosphere	AAAPDRMAPVSRFGNENGQTTIKQGNGTFQFGGQRSFDQRYNTDNIFNPYARDGR*
JGI24737J22298_100848251	3300001990	Corn Rhizosphere	GQGYIDFDKPGAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR*
JGI25405J52794_100865581	3300003911	Tabebuia Heterophylla Rhizosphere	PDRLAPVNRFGNESGQTTYKSGNGTFQFGQQRSFEQKYNTDNIFNPYTREGR*
Ga0055440_100060921	3300004020	Natural And Restored Wetlands	PPDRMAPVSRFGNENGQTSIKQGSGTFQFGAQQSFGQRYNTDNIFNPYTREGR*
Ga0055500_100282332	3300004062	Natural And Restored Wetlands	QDSNGPVGGQGYLDFDKPTAPPDRMAPVSRFGNENGQTSIKQGSGTFQFGAQQSFGQRYNTDNIFNPYTREGR*
Ga0062593_1014472461	3300004114	Soil	VNRFGSENGQTTIKQGNSTLQFGNQQSFGQRYNNENLFNPYAREGR*
Ga0066398_100345401	3300004268	Tropical Forest Soil	NQGGSGGQGFLDLDKPAAPPDRQAPVSSFGTENGRTTFQLGNSKFQFGQQQSFGERYNSKNLFDPYAREGR*
Ga0062595_1004199221	3300004479	Soil	SNGTVSGQGYLDLDKPTAAPDRMAPVNRFGSENGQTTIKQGNSTLQFGNQQSFGQRYNNENLFNPYAREGR*
Ga0062591_1004680383	3300004643	Soil	FGSENGQTTIKQGNSTLQFGNQQSFGQRYNNENLFNPYAREGR*
Ga0066822_10007981	3300005173	Soil	QGFMDLDKPAAPPDRLGTGSRLDSESGMSTMKQGNTTFQFGSQRSFDQRYNTNNLFDPYAREGR*
Ga0066388_1006860043	3300005332	Tropical Forest Soil	RLAPVSRFGNENGQTTIKQGNTTYQFGQQRSFSERYNTNNLFDPYAREGR*
Ga0066388_1009491571	3300005332	Tropical Forest Soil	KPAAAPDRLAPVNRFGNENGQTTYKSGNGTFQFGQQRSFEQKYNTDNIFNPYNREGR*
Ga0066388_1027040062	3300005332	Tropical Forest Soil	KPAAAPDRLAPVNRFGNENGQTTYKSGNGTFQFGQQRSFDQKYNTDNIFNPYARDGR*
Ga0070680_1011130321	3300005336	Corn Rhizosphere	LIAPAAQAFTIQDSGGPNGGQGFIDFDKPAAAPDRMAPVSRFGNENGQTTIKQGNGTFQFGGQQSFGQRYNTDNIFNPYTREGR*
Ga0070682_1000885451	3300005337	Corn Rhizosphere	QGSGSSGGQGFMDLDKPAAPPDRLGTGSRLDSESGMSTMKQGNTTFQFGSQRSFDQRYNTNNLFDPYAREGR*
Ga0070691_108768172	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MQDGSGQSSGQGFLDLDKPSQAPDRMAPVNRFGSENGQSTIKSGNGTLQFGGQSSFQSRYNTDNIFNPYAREGR*
Ga0070659_1005559601	3300005366	Corn Rhizosphere	AFTVQDSNGPVGGQGYIDFDKPGAVPDRMAPVNRFGNENGQTTIKQGNGTFQFGAQQSFGQRYNTDNIFNPYTREGR*
Ga0070659_1017102841	3300005366	Corn Rhizosphere	VAQAFTIQGSGSSGGQGFMDLDKPAAPPDRLGTGSRLDSESGMSTMKQGNTTFQFGSQRSFDQRYNTNNLFDPYAREGR*
Ga0070667_1023699961	3300005367	Switchgrass Rhizosphere	APDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR*
Ga0070713_1009904432	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	QAFMDLDKPAAPDRHTPVSPFNSDTGQTTVKQGNATFQFGQQRSFSDRYNTENMFNPYTREGR*
Ga0070708_1005452042	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	AFTIENQGGAGGQGFMDLDKPAAPPDRHTPVSPFGSENGQTTVKQGNTTFQFGQQRSFNERYNTNNMLDPYAREGR*
Ga0070708_1016832241	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VVSAAQAFTVGDANGPVGGQGYIDFDKPGAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR*
Ga0070678_1019728061	3300005456	Miscanthus Rhizosphere	DSNGPVGGQGYIDFDKPGAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR*
Ga0068867_1003416643	3300005459	Miscanthus Rhizosphere	MDLDKPAAPPDRLGTGSRLDSENGMSTMKQGNTTFQFGSQRSFDQRYNTNNLFDPYAREGR*
Ga0070707_1019544372	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	TMQDSNGTVSGQGYLDLDKPTAAPDRMAPVNRFGSENGQTTIKQGNGTFQFGGQRSFDQRYNTDNIFNPYARDGR*
Ga0070698_1008469931	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VGDSNGPVGGQGYIDFDKPGAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYAREGR*
Ga0074259_117015351	3300005507	Arabidopsis Rhizosphere	MAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR*
Ga0070679_1008021612	3300005530	Corn Rhizosphere	RFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR*
Ga0070684_1012937242	3300005535	Corn Rhizosphere	QAFMDLDKPAAPDRHTPLSPFNSDNGQTTVKQGNTTFQFGQQRSFSDRYSTENMFNPYTREGR*
Ga0068859_1012378432	3300005617	Switchgrass Rhizosphere	FTIEDQGGARSGQAFMDLDKPAAPDRHTPVSPFNSDSGQTTVKQGNTTFQFGQQRSFSDRYNTENMFNPYTREGR*
Ga0066905_1012750962	3300005713	Tropical Forest Soil	SGGPVSGQGYLDLDKPSAAPDRLAPVNRFGNENGTSTYKSGNGTLQFGNQRSFDQKYNTDNIFNPYTREGR*
Ga0066905_1013752302	3300005713	Tropical Forest Soil	AAPDRLAPVSRFGNENGQTTIKQGNSTFQFGQQRSFNERYNTNNLFDPYAREGR*
Ga0068851_104957842	3300005834	Corn Rhizosphere	TIQGSGSSGGQGFMDLDKPAAPPDRLGTGSRLDSESGMSTMKQGNTTFQFGSQRSFDQRYNTNNLFDPYAREGR*
Ga0068851_104977691	3300005834	Corn Rhizosphere	MDLDKPAAPDRHTPVSPFNSDSGQTTVKQGNTTFQFGQQRSFSDRYNTENMFNPYTREGR
Ga0068860_1027434151	3300005843	Switchgrass Rhizosphere	AQAFTMQDSNGTVSGQGYLDLDKPTAAPDRMAPVNRFGSENGQTTIKQGNSTLQFGNQQSFGQRYNNENLFNPYAREGR*
Ga0075018_101959162	3300006172	Watersheds	FTIEDQGGGRSGQAFMDLDKPATTDRHTPVSPFNSDNGQTTVKQGNTTFQFGQQRSFSDRYNTENMFNPYTREGR*
Ga0070712_1002056251	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	HAFTIEDQGGASGGRGYVDLDKPAAAPDRLAPVSPYNAETGKTTIQQGNGTFQFGQQRSFNERYNPNNLFDPYAREGR*
Ga0068871_1001733641	3300006358	Miscanthus Rhizosphere	QAFMDLDKPAAPDRHTPVSPFNSDSGQTTVKQGNTTFQFGQQRSFSDRYNTENMFNPYTREGR*
Ga0074051_117724161	3300006572	Soil	IDFDKPGAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR*
Ga0074050_101077222	3300006577	Soil	KPAGAPDRMAPVSPFNTDSGQTTMKQGNTTLQFGQQRSFNERYNTNNLFDPYAREGR*
Ga0074050_120551192	3300006577	Soil	AQAFTVGDANGPVGGQGYIDFDKPGAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR*
Ga0074054_119943861	3300006579	Soil	LELDKPAAAPDRMAPVNRFGNENGQATIKQGNSTFQFGNQQSFGQRYNTDNIFNPYARDGR*
Ga0074049_130777582	3300006580	Soil	PDRHTPVSPFNSDNGQTTVKQGNTTFQFGQQRSFSDRYNTENMFNPYTREGR*
Ga0074049_131371601	3300006580	Soil	DKPSAAPDRMAPVNRFGNENGQATVKQGNSTFQFGGQQSFGQRYNTDNIFNPYTRDGR*
Ga0079222_111903482	3300006755	Agricultural Soil	GSENGQTTIKQGNSTLQFGNQQSFGQRYNNENLFNPYAREGR*
Ga0079222_115908811	3300006755	Agricultural Soil	YLDLDKPAATDRNAPVNRFGSENGMTTFRSGNSTFQFGSQPSFDRRYSTDNLFNPYMREGRF*
Ga0075429_1019811421	3300006880	Populus Rhizosphere	MKLRVISIVSVAGAFFLGVSAAQAFTLEDQSGSGGQGFLDLEKPAAPPDRLSPSSRFNTENGQTTFKMGNSTFRFGQQQSFSERFNANNLFDPFAREGR*
Ga0068865_1000206161	3300006881	Miscanthus Rhizosphere	PVAQAFTIQGSGSSGGQGFMDLDKPAAPPDRLGTGSRLDSESGMSTMKQGNTTFQFGSQRSFDQRYNTNNLFDPYAREGR*
Ga0075424_1016526092	3300006904	Populus Rhizosphere	EDQGGARSGQAFMDLDKPAAPDRHTPVSPFNSDSGQTTVKQGNTTFQFGQQRSFSDRYNTENMFNPYTREGR*
Ga0079219_114469751	3300006954	Agricultural Soil	LDKPSQAPDRMAPVNRFGNENGQTTVKSGAGTLQFGWQSSYQSRYNTDNIFNPYAREGL*
Ga0075435_1020449631	3300007076	Populus Rhizosphere	GAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGL*
Ga0105244_103834501	3300009036	Miscanthus Rhizosphere	TVHDSNGQVGGQGYLELDKPAAAPDRMAPVSRFGNENGQTTIKQGNGTFQFGGQRSFDQRYNTDNIFNPYARDGR*
Ga0126380_106381211	3300010043	Tropical Forest Soil	PPDRLAPVSRFGNENGQTTIKQGNTTYQFGQQRSFSERYNTNNLFDPYAREGR*
Ga0126384_108157381	3300010046	Tropical Forest Soil	MNLDKPTAPPDRLAPVSPFNTDNGQTTLKQGNATLQFGQQRSFSDRFSTDNMFNPYTREGR*
Ga0126376_114770071	3300010359	Tropical Forest Soil	RLAPVSRFGNENGQTTVKQGNTTFQFGQQRSLSERYNTNNLFDPYTREGR*
Ga0126376_119873802	3300010359	Tropical Forest Soil	MDLDKPTAPPDRHAPVSPFNTENGQSTYKQGNTTLQFGQQRSFSDRYSTENMFNPYTREGR*
Ga0126378_124498372	3300010361	Tropical Forest Soil	PTAPPDRLAPVSPFNTDNGQTTLKQGNATLQFGQQRSFSDRFSTDNMFNPYTREGR*
Ga0134122_131050021	3300010400	Terrestrial Soil	NGQTTIKQGNGTFQFGGQRSFDQRYNTDNIFNPYSRDGR*
Ga0151489_15726071	3300011106	Soil	PAGAPDRMAPVSPFNTDSGQTTMKQGNTTLQFGQQRSFNERYNTNNLFDPYAREGR*
Ga0105246_100386861	3300011119	Miscanthus Rhizosphere	QGSGSSGGQGFMDLDKPAAPPDRLGTGSRLDSDSGMSTMKQGNTTFQFGSQRSFDQRYNTNNLFDPYAREGR*
Ga0105246_122111631	3300011119	Miscanthus Rhizosphere	PDRLGTGSRLDSESGMSTMKQGNTTFQFGSQRSFDQRYNTNNLFDPYAREGR*
Ga0157322_10170142	3300012490	Arabidopsis Rhizosphere	GNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR*
Ga0157341_10076902	3300012494	Arabidopsis Rhizosphere	PGAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR*
Ga0157316_10732812	3300012510	Arabidopsis Rhizosphere	DKPAAPPDRLGTGSRLDSDSGMSTMKQGNTTFQFGSQRSFDQRYNTNNLFDPYAREGR*
Ga0157330_10011803	3300012514	Soil	VGGQGYIDFDKPGAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR*
Ga0157296_100035931	3300012905	Soil	ANGPVGGQGYIDFDKPGAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR*
Ga0157286_102914961	3300012908	Soil	NRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYTREGR*
Ga0157301_104455102	3300012911	Soil	VNRFGTENGQTTYKQGNATFQFGNKPSFGQRYNTDNIFNPYARDGR*
Ga0157298_102154811	3300012913	Soil	NRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR*
Ga0157297_105028212	3300012914	Soil	ENGQTTIKQGNSTLQFGNQQSFGQRYNNENLFNPYAREGR*
Ga0153915_118005751	3300012931	Freshwater Wetlands	ASGGQGFMDLDKPAAAPDRHVPVSPFSSSNGQSTVKQGNTTLQFGQQRSFNERFNSNNLLDPYAREGR*
Ga0164303_103814772	3300012957	Soil	SDRHVPVSPFNTDNGQTTMKQGNTTLQFGQQRSFNERYNTDNMFNPYTREGR*
Ga0164301_108085411	3300012960	Soil	AAPVAQAFTIQGAGGSSGGQGFMDLDKPAAPPDRLGTGSRLDRENGMSTMKQGNTTFQFGSQRSFDQRYNTNNLFDPYAREGR*
Ga0157373_115502002	3300013100	Corn Rhizosphere	AQAFSVVAASLKKNGQGYIDFDKPGAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR*
Ga0157371_109769511	3300013102	Corn Rhizosphere	NGQPTVKSGNGTLQFGGQSSFQSRYNTDNIFNPYAREGR*
Ga0157369_116787891	3300013105	Corn Rhizosphere	NGQVGGQGYLELDKPAAAPDRMAPVSRFGNENGQTTIKQGNGTFQFGGQRSFDQRYNTDNIFNPYARDGR*
Ga0163162_127480032	3300013306	Switchgrass Rhizosphere	AAPDRHTPVSPFNSDSGQTTVKQGNTTFQFGQQRSFSDRYSTENMFNPYTREGR*
Ga0075303_10031891	3300014299	Natural And Restored Wetlands	DSNGPVGGQGYLDFDKPTTPPDRMAPVSRFGNENGQTSIKQGSGTFQFGAQQSFGQRYNTDNIFNPYTREGR*
Ga0157377_108961362	3300014745	Miscanthus Rhizosphere	VAQAFTIQGSGSSGGQGFMDLDKPAAPPDRLGTGSRLDSDSGMSTMKQGNTTFQFGSQRSFDQRYNTNNLFDPYAREGR*
Ga0132256_1018067901	3300015372	Arabidopsis Rhizosphere	DRMAPVNRFGNENGQTTIKQGNGTFQFGAQQSFGQRYNTDNIFNPYTREGR*
Ga0132257_1003366861	3300015373	Arabidopsis Rhizosphere	NGPVGGQGYIDFDKPGAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR*
Ga0187776_113334251	3300017966	Tropical Peatland	QGYVDLDKPAAAPDRLTPVSPFNTGGGQTTIKQGNSTFQFGQQRSFNDRYNTNNLFDPYAREGR
Ga0187776_113964061	3300017966	Tropical Peatland	PAAPPDRHVPVSPFNTDNGQTTFKQGNSTFQFGQQRSFNERYNTNNLFDPYAREGR
Ga0187777_112617981	3300017974	Tropical Peatland	GGQGYVDMDKPAPAPDRLTPVSPFNTDNGQTTIKQGNSTFQFGQQRSFNERYNTNNLFDPYAREGR
Ga0187823_101975901	3300017993	Freshwater Sediment	PATQDRNVPVSRFGTENGQTTIKQGNTTLQFGQPRSFSDRYNTDNIFNPYTREGR
Ga0173481_105956571	3300019356	Soil	APDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR
Ga0193721_10316372	3300020018	Soil	VPAAQAFTIENSGGSGSGQGFMDLDKPAAAPDRLAPVSRLGTENGQTSIKQGNTTFQFGQQRSFDDRYNTNNLFNPYTREGR
Ga0247785_10035841	3300022889	Soil	FTVGDANGPVGGQGYIDFDKPGAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR
Ga0247753_10042423	3300022892	Soil	PGAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR
Ga0247801_10528472	3300023064	Soil	GAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR
Ga0247751_10061703	3300023069	Soil	PAAAPDRMAPVSRFGNENGQTTIKQGNGTFQFGGQQSFGQRYNTDNIFNPYARDGR
Ga0247799_10061381	3300023072	Soil	GPVGGQGYIDFDKPGAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR
Ga0247754_10255763	3300023102	Soil	RMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR
Ga0207697_105008941	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	QDSNGTVSGQGYLDLDKPTAAPDRMAPVNRFGSENGQTTIKQGNSTLQFGNQQSFGQRYNNENLFNPYAREGR
Ga0207656_101152061	3300025321	Corn Rhizosphere	TIQGSGSSGGQGFMDLDKPAAPPDRLGTGSRLDSESGMSTMKQGNTTFQFGSQRSFDQRYNTNNLFDPYAREGR
Ga0210094_10201151	3300025549	Natural And Restored Wetlands	GPVGGQGYLDFDKPTTPPDRMAPVSRFGNENGQTSIKQGSGTFQFGAQQSFGQRYNTDNIFNPYTREGR
Ga0207710_101562423	3300025900	Switchgrass Rhizosphere	PAAPDRHTPVSPFNSDSGQTTVKQGNTTFQFGQQRSFSDRYSTENMFNPYTREGR
Ga0207680_113281072	3300025903	Switchgrass Rhizosphere	TAAPDRMAPVNRFGSENGQTTIKQGNSTLQFGNQQSFGQRYNNENLFNPYAREGR
Ga0207645_100178587	3300025907	Miscanthus Rhizosphere	IQGSGSSGGQGFMDLDKPAAPPDRLGTGSRLDSESGMSTMKQGNTTFQFGSQRSFDQRYNTNNLFDPYAREGR
Ga0207671_108710902	3300025914	Corn Rhizosphere	DFDKPGAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR
Ga0207660_116379432	3300025917	Corn Rhizosphere	FGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR
Ga0207652_118301122	3300025921	Corn Rhizosphere	GQTTRKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR
Ga0207694_100514484	3300025924	Corn Rhizosphere	FGNENGQTTIKQGNGTFQFGGQRSFDQRYNTDNIFNPYARDGR
Ga0207690_104911891	3300025932	Corn Rhizosphere	AFTVQDSNGPVGGQGYIDFDKPGAVPDRMAPVNRFGNENGQTTIKQGNGTFQFGAQQSFGQRYNTDNIFNPYTREGR
Ga0207690_111577722	3300025932	Corn Rhizosphere	GAVPVAQAFTIQGSGSSGGQGFMDLDKPAAPPDRLGTGSRLDSESGMSTMKQGNTTFQFGSQRSFDQRYNTNNLFDPYAREGR
Ga0207665_115999031	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	GGASGGQGYVDLDKPAAAPDRMAPVSPFNTDNGQTTIKQGNGTFQFGQQRSFNERYNPNNLFDPYAREGR
Ga0207711_101790291	3300025941	Switchgrass Rhizosphere	TTIKQGNSTLQFGNQQSFGQRYNNENLFNPYAREGR
Ga0207679_101662721	3300025945	Corn Rhizosphere	GGQGYLDFDKLGAPPDRMAPVSRFGNENGQTTIKQGNGTFQFGAQQSFGQRYNTDNIFNPYARDGR
Ga0207679_113463361	3300025945	Corn Rhizosphere	GGARSGQAFMDLDKPAAPDRHTPLSPFNSDNGQTTVKQGNTTFQFGQQRSFSDRYSTENMFNPYTREGR
Ga0207651_112899661	3300025960	Switchgrass Rhizosphere	ENGQTTIKQGNSTLQFGNQQSFGQRYNNENLFNPYAREGR
Ga0210090_10556292	3300025965	Natural And Restored Wetlands	DRMAPVSRFGNENGQTSIKQGSGTFQFGAQQSFGQRYNTDNIFNPYTREGR
Ga0208422_10383961	3300026053	Natural And Restored Wetlands	QGYLDFDKPPDRMAPVSRFGNENGQTSIKQGSGTFQFGAQQSFGQRYNTDNIFNPYTREG
Ga0207678_118394562	3300026067	Corn Rhizosphere	KPTAAPDRMAPVNRFGSENGQTTIKQGNSTLQFGNQQSFGQRYNNENLFNPYAREGR
Ga0207698_113583001	3300026142	Corn Rhizosphere	GSGSSGGQGFMDLDKPAAPPDRLGTGSRLDSESGMSTMKQGNTTFQFGSQRSFDQRYNTNNLFDPYAREGR
Ga0207512_1010431	3300026709	Soil	VNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR
Ga0207597_1019022	3300026742	Soil	DRMAPVSRFGNENGQTTIKQGNGTFQFGGQRSFDQRYNTDNIFNPYARDGR
Ga0207473_1027331	3300026752	Soil	GQGYIDFDKPGAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR
Ga0207566_1052321	3300026773	Soil	DRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR
Ga0207499_1030411	3300026792	Soil	NGQVGGQGYLELDKPAAAPDRMAPVSRFGNENGQTTIKQGNGTFQFGGQRSFDQRYNTDNIFNPYARDGR
Ga0207467_10001991	3300027036	Soil	VSRFGNENGQTTIKQGNGTFQFGGQRSFDQRYNTDNIFNPYARDGR
Ga0207538_10003844	3300027122	Soil	AFTVGDANGPVGGQGYIDFDKPGAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR
Ga0207609_1045512	3300027403	Soil	AAPDRMAPVSRFGNENGQTTIKQGNGTFQFGGQRSFDQRYNTDNIFNPYARDGR
Ga0207564_1010103	3300027438	Soil	QTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR
Ga0207637_10009281	3300027483	Soil	DRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYTREGR
Ga0209966_11708761	3300027695	Arabidopsis Thaliana Rhizosphere	ELDKPAAAPDRMAPVSRFGNENGQTTIKQGNGTFQFGGQRSFDQRYNTDNIFNPYARDGR
Ga0209811_103478811	3300027821	Surface Soil	DSNGPVGGQGYIDFDKPGAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR
Ga0207428_106901462	3300027907	Populus Rhizosphere	LGTGSRLDSENGMSTMKQGNTTFQFGSQRSFDQRYNTNNLFDPYAREGR
Ga0247750_10123811	3300027992	Soil	PVSRFGNENGQTTIKQGNGTFQFGGQRSFDQRYNTDNIFNPYARDGR
Ga0307323_100514393	3300028787	Soil	SGQGFMDLDKPAAAPDRLAPVSRLGTENGQTSIKQGNTTFQFGQQRSFDDRYNTNNLFNPYTREGR
Ga0307290_102992391	3300028791	Soil	PAAQAFTIENSGGSGSGQGFMDLDKPAAAPDRLAPVSRLGTENGQTSIKQGNTTFQFGQQRSFDDRYNTNNLFNPYTREGR
Ga0307292_102479382	3300028811	Soil	FTIENSGGSGSGQGFMDLDKPAAAPDRLGPTSRFGTENGQTSYKQGNTTFQFGQQRSFEQRYNTNNLFDPYAREGR
(restricted) Ga0255311_11347602	3300031150	Sandy Soil	NENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR
Ga0310887_107501151	3300031547	Soil	AAHAFSMQDSNGPVSGQGYLELDKPAAAPDRMAPVNRFGNENGQATIKQGNSTFQFGNQQSFGQRYNTDNIFNPYARDGR
Ga0265342_105969642	3300031712	Rhizosphere	SGAHAFTIEDQGGASGGRGYVDLDKPAAAPDRLAPVSPFNTENGQTTIKQGNSTFQFGQQRSFNERYNSNNLFDPYAREGR
Ga0318554_102765751	3300031765	Soil	PRRSGGAGFIDLDKPAAPPDRLGTGSRFDSENGKSTMKQGNTTFQFGSQRSFDERYNTNNLFDPYAREGR
Ga0310907_100132101	3300031847	Soil	NGPVGGQGYIDFDKPGAAPDRMAPVNRFGNENGQTTMKQGNSTLQFGGQQSFGQRYNTDNIFNPYARDGR
Ga0310893_100013071	3300031892	Soil	AFTIQGAGGSSGGQGFMDLDKPAAPPDRLGTGSRLDSENGMSTMKQGNTTFQFGSQRSFDQRYNTNNLFDPYAREGR
Ga0310910_104660602	3300031946	Soil	GGQAFMDLDKPAAPPDRHTPVSPFNSSNGQTTYKQGDMTLQFGQQRPFSDRFSTENMFNPYTREGR
Ga0306922_111594261	3300032001	Soil	FTIEDQGGARGGQAFMDLDKPAAPPDRHTPVSPFNSSNGQTTYKQGDMTLQFGQQRPFSDRFSTENMFNPYTREGR
Ga0310902_110699592	3300032012	Soil	DLDKPAAPDRHTPVSPFNSDSGQTTVKQGNTTFQFGQQRSFSDRYNTENMFNPYTREGR
Ga0318532_100590231	3300032051	Soil	AGFIDLDKPAAPPDRLGTGSRFDSENGKSTMKQGNTTFQFGSQRSFDERYNTNNLFDPYAREGR
Ga0310890_110147681	3300032075	Soil	MAPVNRFGNENGQATIKQGNSTFQFGNQQSFGQRYNTDNIFNPYARDGR
Ga0310890_117819331	3300032075	Soil	DKPAAPPDRLGTGSGFGSENGQSTYKQGNTTFQFGQQRSFDQRYNTNNLFDPYAREGR
Ga0310896_108106621	3300032211	Soil	PAAPPDRLGTGSRLDSENGMSTMKQGNTTFQFGSQRSFDQRYNTNNLFDPYAREGR
Ga0335084_105066251	3300033004	Soil	GAAPDRMAPVNRFGNENNGQTTIKQGSGTFQFGAQQSFGQRYNTDNIFNPYTRDGR
Ga0326726_113182332	3300033433	Peat Soil	KPAATPDRHTPVSPFNTDNGQTSVKQGNTTFQFGQQRSFNERYNSNNLFDPYAREGR
Ga0310811_104288263	3300033475	Soil	SAAQAFTMQDSNGTVSGQGYLDLDKPTAAPDRMAPVNRFGSENGQTTIKQGNSTLQFGNQQSFGQRYNNENLFNPYAREGR
Ga0314871_005135_706_846	3300033809	Peatland	VSPFNTDNGQTTIKQGNSTFQFGQQRSFNERYNTNNLFDPYAREGR
Ga0373950_0000870_3595_3798	3300034818	Rhizosphere Soil	VSGQGYLDLDKPTAAPDRMAPVNRFGSENGQTTIKQGNGTFQFGGQRSFDQRYNTDNIFNPYARDGR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters