 |
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F082749 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 113 |
| Average Sequence Length | 117 residues |
| Representative Sequence | MDGESVDAAGKLGRKRLINHAMTLDAGLSLEGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPAKAHNVRS |
| Number of Associated Samples | 111 |
| Number of Associated Scaffolds | 113 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 100.00 % |
| % of genes near scaffold ends (potentially truncated) | 0.00 % |
| % of genes from short scaffolds (< 2000 bps) | 0.00 % |
| Associated GOLD sequencing projects | 107 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.23 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (99.115 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil (20.721 % of family members) |
| Environment Ontology (ENVO) | Unclassified (30.088 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (47.788 % of family members) |
| ⦗Top⦘ |
| ⦗Top⦘ |
| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 20.00% β-sheet: 0.00% Coil/Unstructured: 80.00% | Feature Viewer |
|
|
|||||
| Powered by Feature Viewer | |||||
| Structure Viewer | |
|---|---|
|
| |
| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.23 |
| Powered by PDBe Molstar | |
| ⦗Top⦘ |
| Pfam ID | Name | % Frequency in 113 Family Scaffolds |
|---|---|---|
| PF03471 | CorC_HlyC | 30.97 |
| PF00226 | DnaJ | 15.04 |
| PF12556 | CobS_N | 7.96 |
| PF01761 | DHQ_synthase | 4.42 |
| PF11775 | CobT_C | 2.65 |
| PF06213 | CobT | 2.65 |
| PF03255 | ACCA | 1.77 |
| PF13207 | AAA_17 | 0.88 |
| PF02899 | Phage_int_SAM_1 | 0.88 |
| PF00271 | Helicase_C | 0.88 |
| PF07517 | SecA_DEAD | 0.88 |
| PF06850 | PHB_depo_C | 0.88 |
| PF13449 | Phytase-like | 0.88 |
| COG ID | Name | Functional Category | % Frequency in 113 Family Scaffolds |
|---|---|---|---|
| COG4547 | Cobalamin biosynthesis cobaltochelatase CobT subunit | Coenzyme transport and metabolism [H] | 2.65 |
| COG0825 | Acetyl-CoA carboxylase alpha subunit | Lipid transport and metabolism [I] | 1.77 |
| COG0653 | Preprotein translocase subunit SecA (ATPase, RNA helicase) | Intracellular trafficking, secretion, and vesicular transport [U] | 0.88 |
| COG3243 | Poly-beta-hydroxybutyrate synthase | Lipid transport and metabolism [I] | 0.88 |
| COG4553 | Poly-beta-hydroxyalkanoate depolymerase | Lipid transport and metabolism [I] | 0.88 |
| COG4973 | Site-specific recombinase XerC | Replication, recombination and repair [L] | 0.88 |
| COG4974 | Site-specific recombinase XerD | Replication, recombination and repair [L] | 0.88 |
| ⦗Top⦘ |
| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 99.12 % |
| All Organisms | root | All Organisms | 0.88 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300005937|Ga0081455_10000002 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 460472 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| ⦗Top⦘ |
| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 20.72% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 10.81% |
| Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 9.01% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 7.21% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 6.31% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.50% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 3.60% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 2.70% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.80% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 1.80% |
| Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 1.80% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 1.80% |
| Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 1.80% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.80% |
| Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 1.80% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 1.80% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 1.80% |
| Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment | 0.90% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 0.90% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.90% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.90% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.90% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.90% |
| Permafrost Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil | 0.90% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.90% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.90% |
| Plant Litter | Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter | 0.90% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.90% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.90% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.90% |
| Populus Endosphere | Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere | 0.90% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.90% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.90% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.90% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.90% |
| Rhizosphere Soil | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil | 0.90% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.90% |
| Sediment Slurry | Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry | 0.90% |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000953 | Soil microbial communities from Great Prairies - Kansas Corn soil | Environmental | Open in IMG/M |
| 3300001976 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 | Host-Associated | Open in IMG/M |
| 3300003212 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08K1-12 | Environmental | Open in IMG/M |
| 3300003353 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A2-11 | Environmental | Open in IMG/M |
| 3300003911 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
| 3300003995 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 | Environmental | Open in IMG/M |
| 3300004024 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 | Environmental | Open in IMG/M |
| 3300004062 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2 | Environmental | Open in IMG/M |
| 3300004070 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2 | Environmental | Open in IMG/M |
| 3300004145 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 | Environmental | Open in IMG/M |
| 3300004281 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio | Environmental | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300005103 | Soil and rhizosphere microbial communities from Laval, Canada - mgLAA | Environmental | Open in IMG/M |
| 3300005168 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPC | Environmental | Open in IMG/M |
| 3300005205 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2 | Environmental | Open in IMG/M |
| 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 | Host-Associated | Open in IMG/M |
| 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Environmental | Open in IMG/M |
| 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Environmental | Open in IMG/M |
| 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
| 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Environmental | Open in IMG/M |
| 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Environmental | Open in IMG/M |
| 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
| 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
| 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
| 3300006048 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Host-Associated | Open in IMG/M |
| 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Host-Associated | Open in IMG/M |
| 3300006576 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006580 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
| 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
| 3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
| 3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
| 3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
| 3300012885 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 | Environmental | Open in IMG/M |
| 3300012892 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 | Environmental | Open in IMG/M |
| 3300012895 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2 | Environmental | Open in IMG/M |
| 3300012896 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2 | Environmental | Open in IMG/M |
| 3300012901 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1 | Environmental | Open in IMG/M |
| 3300012902 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1 | Environmental | Open in IMG/M |
| 3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
| 3300012985 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG | Environmental | Open in IMG/M |
| 3300014308 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1 | Environmental | Open in IMG/M |
| 3300014324 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1 | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300019356 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2) | Environmental | Open in IMG/M |
| 3300022889 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4 | Environmental | Open in IMG/M |
| 3300023077 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6 | Environmental | Open in IMG/M |
| 3300023168 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5 | Environmental | Open in IMG/M |
| 3300023270 | Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L169-409R-5 | Environmental | Open in IMG/M |
| 3300024249 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17 | Environmental | Open in IMG/M |
| 3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025538 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025735 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025953 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025955 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025965 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026275 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058 (SPAdes) | Environmental | Open in IMG/M |
| 3300026452 | Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU4 | Environmental | Open in IMG/M |
| 3300026655 | Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G10K1-12 (SPAdes) | Environmental | Open in IMG/M |
| 3300026658 | Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G09K4-12 (SPAdes) | Environmental | Open in IMG/M |
| 3300026761 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A5-11 (SPAdes) | Environmental | Open in IMG/M |
| 3300026786 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A5a-11 (SPAdes) | Environmental | Open in IMG/M |
| 3300026806 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A4a-10 (SPAdes) | Environmental | Open in IMG/M |
| 3300026811 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A4w-12 (SPAdes) | Environmental | Open in IMG/M |
| 3300026812 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A3-10 (SPAdes) | Environmental | Open in IMG/M |
| 3300026826 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A2-10 (SPAdes) | Environmental | Open in IMG/M |
| 3300026828 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A5-12 (SPAdes) | Environmental | Open in IMG/M |
| 3300026834 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A1-10 (SPAdes) | Environmental | Open in IMG/M |
| 3300026944 | Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K2-12 (SPAdes) | Environmental | Open in IMG/M |
| 3300027122 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-11 (SPAdes) | Environmental | Open in IMG/M |
| 3300027178 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A5-11 (SPAdes) | Environmental | Open in IMG/M |
| 3300027378 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027399 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A2-11 (SPAdes) | Environmental | Open in IMG/M |
| 3300027403 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A5-11 (SPAdes) | Environmental | Open in IMG/M |
| 3300027411 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-12 (SPAdes) | Environmental | Open in IMG/M |
| 3300027424 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027425 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A2-10 (SPAdes) | Environmental | Open in IMG/M |
| 3300027427 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A2-11 (SPAdes) | Environmental | Open in IMG/M |
| 3300027436 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A3-11 (SPAdes) | Environmental | Open in IMG/M |
| 3300027437 | Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G05K2-12 (SPAdes) | Environmental | Open in IMG/M |
| 3300027438 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3a-11 (SPAdes) | Environmental | Open in IMG/M |
| 3300027448 | Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G08K5-12 (SPAdes) | Environmental | Open in IMG/M |
| 3300027526 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027543 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027560 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes) | Environmental | Open in IMG/M |
| 3300027614 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027617 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027717 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027821 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027907 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027992 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S125-311R-5 | Environmental | Open in IMG/M |
| 3300028590 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30 | Environmental | Open in IMG/M |
| 3300031150 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4 | Environmental | Open in IMG/M |
| 3300031248 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5 | Environmental | Open in IMG/M |
| 3300031547 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4 | Environmental | Open in IMG/M |
| 3300031716 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3 | Environmental | Open in IMG/M |
| 3300031908 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1 | Environmental | Open in IMG/M |
| 3300031943 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2 | Environmental | Open in IMG/M |
| 3300032144 | Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil | Environmental | Open in IMG/M |
| 3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
| 3300032211 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1 | Environmental | Open in IMG/M |
| 3300032892 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5 | Environmental | Open in IMG/M |
| 3300033004 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4 | Environmental | Open in IMG/M |
| 3300033550 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4 | Environmental | Open in IMG/M |
| 3300033551 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5 | Environmental | Open in IMG/M |
| 3300034692 | Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.3 | Engineered | Open in IMG/M |
| 3300034817 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 | Host-Associated | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI11615J12901_100297692 | 3300000953 | Soil | MHATRKLGGKRLIDHAVALYAGLSFERLRDDIHSEVSLPARPVPGMTLVLVRFINHFEALRHESLGQLLRDEIGGSHIARLGERGLPVNG |
| JGI24752J21851_10006281 | 3300001976 | Corn, Switchgrass And Miscanthus Rhizosphere | HCIAHSAFAANATGEGRLAPAFARRGGMDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS* |
| JGI26307J46569_100301 | 3300003212 | MDGESVDAAGKLGRKXLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS* | |
| JGI26319J50203_100152 | 3300003353 | MTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS* | |
| JGI25405J52794_100164524 | 3300003911 | Tabebuia Heterophylla Rhizosphere | RRFTGCGCVDSERVYAAPELGRKRSIDHPVTFDAGLSPERIRHDIDPVVGLPARLVSGVAFMLVRFINYFEALRCESLGQLFCDEIGGSHIARLGERGLPVNGHKQVLKASPVKAHNIRS |
| Ga0055438_100368842 | 3300003995 | Natural And Restored Wetlands | MHATRKLGGKRLIDHAVTLDAGLSFERLRHDIHTEVSLRARPVRGMAFVLVRFINHFEALRHESLGQLLCDEIGGSHIARLGECGPPVNGHKQVLNASPTKAHNLWS* |
| Ga0055436_101242151 | 3300004024 | Natural And Restored Wetlands | MHATRKLGGKRLIDHAVTLDAGLSFERLRHDIHTEVSLRARPVRGMAFVLVRFINHFEALRHESLGQLLCDEIGGSHIARLGECGLPVNGHKQVLN |
| Ga0055500_100387062 | 3300004062 | Natural And Restored Wetlands | MHATRKLGGKRLIDHAVTLDAGLSFERLRHNIHTEVSLPAWPVSGMTFVLVRFINHFEALRHESLGQLLCDEIGGSHIARLGECSLPVNGHKQVLNASPAKAHNVWS* |
| Ga0055488_101559431 | 3300004070 | Natural And Restored Wetlands | MHATRKLGGKRLIDHAVTLDAGLSFERLRHDIHTEVSLRARPVRGMAFVLVRFINHFEALRHESLGQLLCDEIGGSHIARLGECGLPVNGHKQVLNASPTKA |
| Ga0055489_103142702 | 3300004145 | Natural And Restored Wetlands | MHATRKLGGKRLIDHAVTLDAGLSFERLRHDIHTEVSLRARPVRGMAFVLVRFINHFEALRHESLGQLLCDEIGGSHIARLGECGLPVN |
| Ga0066397_101742452 | 3300004281 | Tropical Forest Soil | VDGERVHAARELGRKRLVDHAVTFNAGLSLERIRHDIDPIMGLPARPVSGVAFMLVRFVNYFEALRRESLGQLFCDEIGGSHIARLGERGLPVNGHKQVLKASPVKAHNIRS* |
| Ga0062595_1018860071 | 3300004479 | Soil | GDDHRRAGHSRGAFDSGGGPKFHVPRIPFPRAAPRTQPYHCIAHSAFAANATGEGRLAPAFARRGGMDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS* |
| Ga0066813_10023671 | 3300005103 | Soil | KQLINHAVAFEPGLSFERFRYDIDTEMSLPARPVPGMAFMLVRFINYFEALRRESLDQFFCDEIGGSHIARLGERGLPVNGRKQVLKASPAKAHNVRS* |
| Ga0066809_100077781 | 3300005168 | Soil | MDGESVYAAGKLGRKRLINHAVTLDAGLSLEGVRHDIDPVVSLPARPMPGMALMLVRFINHFEALRRESLGQLFCDEIGGSHIARLGERSLPVNGRKQVLK |
| Ga0068999_100336181 | 3300005205 | Natural And Restored Wetlands | MHATRKLGGKRLIDHAVTLDAGLSFERLRHNIHTEVSLPAWPVSGMTFVLVRFINHFEALRHESLGQLLCDEIGGSHIARLGECSLPVNGH |
| Ga0065712_100046023 | 3300005290 | Miscanthus Rhizosphere | MDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS* |
| Ga0070690_1007562202 | 3300005330 | Switchgrass Rhizosphere | VNGEGVDAAGEFSCQRLIDHAVTLDAGLSPERVRYNIYPIVRLPARSVPGMAFMLVRFINHFQALRRESLGQLFCDEIGGLHIARLGECGMPVNGHKQVLN |
| Ga0070691_100493781 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | MDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASP |
| Ga0070694_1000022711 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | VPRIPFPRAAPRTQPYHCIAHSAFAANATGEGRLAPAFARRGGMDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS* |
| Ga0070679_1008400011 | 3300005530 | Corn Rhizosphere | PLPRAAPRAQSYHCVAHSAFAANATGEGRLVSAFARGGSVDGESVYAAGKLGRKRLINHAVTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEALGRESLGQLFCDEIGGSHAARLGESGLPVNGYKQVLKASPAEAHNVRS* |
| Ga0070684_1006666551 | 3300005535 | Corn Rhizosphere | AVTLDAGLSLESVRHDIKPVVSLSVRPMSGMALMMMRFINDFEALRRESLGQLLCDEIGGSHIARLRERGLRVNGHKQVLKASPAKAHNVWS* |
| Ga0068856_1016032822 | 3300005614 | Corn Rhizosphere | VNGQGVDAAGEFSCQRLIDHAVTLDAGLSPERVRYNIHPVVRLPARSVPGMAFMLVRFINHFQALRRESLGQLFCDEIGGLHIARLGECGMPVNGHKQVLN |
| Ga0068860_1009188612 | 3300005843 | Switchgrass Rhizosphere | PRPQPHYRAAHSAFAANAIGKGRLVSVLTGCGGVNGEGVDAAGEFSCQRLIDHAVTLDAGLSPERVRYNIHPVVRLPARSVPGMAFMLVRFINHFQALRRESLGQLFCDEIGGLHIARLGECGMPVNGHKQVLNPSPAKAHNVRS* |
| Ga0081455_100000025 | 3300005937 | Tabebuia Heterophylla Rhizosphere | VYAAPELGRKRSIDHPVTFDAGLSPERIRHDIDPVVGLPARLVSGVAFMLVRFINYFEALRCESLGQLFCDEIGGSHIARLGERGLPVNGHKQVLKASPVKAHNIRS* |
| Ga0075363_1002899861 | 3300006048 | Populus Endosphere | YRAAHSAFAANAIGKGRLVSVLTGCGGVNGEGVDAADEFSCQRLIDHAVTLDAGLSPERVRYNIHPVVRLPARSVPGMAFMLVRFINHFQALRRESLGQLFCDEIGGLHIARLGECGMPVNGHKQVLNPSPAKAHNVRS* |
| Ga0068871_1009798491 | 3300006358 | Miscanthus Rhizosphere | SELHIPRIPLPGPAPRPQPHYRAAHSAFAANAIGKGRLVSVLTGCGGVNGEGVDAAGEFSCQRLIDHAVTLDAGLSPERVRYNIHPIVRLPARSVPGMAFMLVRFINHFQALRRESLGQLFCDEIGGLHIARLGECGMPVNGHKQVLNPSPAKAHNVRS* |
| Ga0074047_120235712 | 3300006576 | Soil | MDGESVYAAGKLGRKRLINHAVTLDAGLSLEGVRHDIDPVVSLPARPMPGMALMLVRFINHFEALRRESLGQLFCDEIGGSHIARLGERGLPVNGHKQVLNASPAKAHNVRS* |
| Ga0074049_127767692 | 3300006580 | Soil | MDGESVYAAGKLGRKRLINHAVTLDAGLSLEGVRHDIDPVVSLPARPMPGMALMLVRFINHFEALRRESLGQLFCDEIGGSHIARLGERSLPVNGRKQVLKPSPAKAHNVRS* |
| Ga0075425_1002862604 | 3300006854 | Populus Rhizosphere | IPLPGPAPRPQPHYRAAHSAFAANAIGKGRLVSVLTGCGGVNGEGVDAADEFSCQRLIDHAVTLDAGLSPERVRYNIHPVVRLPARSVPGMAFMLVRFINHFQALRRESLGQLFCDEIGGLHIARLGECGMPVNGHKQVLNPSPAKAHNVRS* |
| Ga0105243_100025128 | 3300009148 | Miscanthus Rhizosphere | MDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPAKAHNVRS* |
| Ga0126382_100032166 | 3300010047 | Tropical Forest Soil | VDGERVHAARELGRKRLVDHAVTFNAGLSLERIRHDIDPIMGLPARPVSGVAFMLVRFVNYFEALWRESLGQLFCDEIVGSHIARLRERGLPVNGHKQVLKASPVKAHNIRS* |
| Ga0134121_100056552 | 3300010401 | Terrestrial Soil | MDGESVDAAGKLGRERLINHAMTLDAGLSLEGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS* |
| Ga0134123_132949141 | 3300010403 | Terrestrial Soil | INHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMTLVLVRFINHFEALRHESLGQLLCDEIGGSHIARLGERGLPVNGHKQVLKASPATAHNVRS* |
| Ga0157287_10004534 | 3300012885 | Soil | MDGESVDAAGKLGRKRLINHAMTLDAGLSLQGVRHDIDPVVSLPARPVPGMALMLLRLINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS* |
| Ga0157294_100003443 | 3300012892 | Soil | MDGESVDAAGKLGRKRLINHAMTLDAGLSLEGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPAKAHNVRS* |
| Ga0157309_100003007 | 3300012895 | Soil | MDGESVDAAGKLGRKRLINHAMTLDAGLSLEGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS* |
| Ga0157303_100000927 | 3300012896 | Soil | MDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKVSPVKAHNVRS* |
| Ga0157288_100005034 | 3300012901 | Soil | MDGESVDAAGKLGRKRLINHAVTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMFVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS* |
| Ga0157291_101460752 | 3300012902 | Soil | MDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERGLPVNGHKQVLNASPAKAHNVRS* |
| Ga0164301_1000016611 | 3300012960 | Soil | MDGESVNAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS* |
| Ga0164301_116070341 | 3300012960 | Soil | TMTFEPGLSFERLGHDIDSEMGLPARPVPGMAFMLVRFINYFEALRRESLDQFFCDEIGGSHIARLGERGLPVNGHKQVLNASPAKAHNVRS* |
| Ga0164308_100024277 | 3300012985 | Soil | MDGESVDAAGKLGRERLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS* |
| Ga0075354_10071043 | 3300014308 | Natural And Restored Wetlands | CGCVDGKRMHATRKLGGKRLIDHAVTLDAGLSFERLRHNIHTEVSLPAWPVSGMTFVLVRFINHFEALRHESLGQLLCDEIGGSHIARLGECSLPVNGHKQVLNASPAKAHNVWS* |
| Ga0075352_10103691 | 3300014324 | Natural And Restored Wetlands | TQSHNCAAHPAFATDAACGLVSGFTGCGCVDGKRMHATRKLGGKRLIDHAVTLDAGLSFERLRHNIHTEVSLPAWPVSGMTFVLVRFINHFEALRHESLGQLLCDEIGGSHIARLGECSLPVNGHKQVLNASPAKAHNVWS* |
| Ga0132258_119380892 | 3300015371 | Arabidopsis Rhizosphere | MDGESVDAAGKLGRKRLINHAMTLDAGLSLEGVRHDIDPVVSLPARPVPGMALMPVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPAKAHNVRS* |
| Ga0132258_131525942 | 3300015371 | Arabidopsis Rhizosphere | MHASREFVGKRLIDHAVTLDAGFSLERLRHDIDPEVSLPAWPVPGMTLVLVRFINHFEALRPESLGQLSCDEIGGSHVARLGERSLPVNGRKQVLKPSPAKAHNVRS* |
| Ga0173481_100107273 | 3300019356 | Soil | MDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0247785_10145411 | 3300022889 | Soil | VNGQGVDAAGEFSCQRLIDHAVTLDAGLSFERLRHDIHPEVSLPARPVPGMTLVLVRFINHFEALRHESLGQLLCDELGGSHIDRLGERGLPVNGHKQVLNASPAKAHNVGS |
| Ga0247802_10134762 | 3300023077 | Soil | MDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPAKAHNV |
| Ga0247748_10035992 | 3300023168 | Soil | MDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPAKAHNVRS |
| Ga0247784_11509381 | 3300023270 | Plant Litter | APRTQPYHCIAHSAFAANATGEGRLAPAFARRGGMDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0247676_10933581 | 3300024249 | Soil | RSELHIPRIPLPGSAPRPQPHYRAAHSAFAANAIGKGRLVSVLTGCGGVNGEGVDAAGEFSCQRLIDHAVTLDAGLSPERVRYNIHPIVRLPARSVPGMAFMLVRFINHFQALRRESLGQLFCDEIGGLHIARLGECGMPVNGHKQVLNPSPAKAHNVRS |
| Ga0207697_105393281 | 3300025315 | Corn, Switchgrass And Miscanthus Rhizosphere | NSGRRSELHIPRIPLPGPAPRPQPHYRAAHSAFAANAIGKGRLVSVLTGCGGVNGQGVDAAGEFSCQRLIDHAVTLDAGLSPERVRYNIHPVVRLPARSVPGMAFMLVRFINHFQALRRESRGQLFCDEIGSLHIARLGECGMPVNGHKQVLNPSPAKAHNVRS |
| Ga0210132_10051782 | 3300025538 | Natural And Restored Wetlands | MHATRKLGGKRLIDHAVTLDAGLSFERLRHDIHTEVSLRARPVRGMAFVLVRFINHFEALRHESLGQLLCDEIGGSHIARLGECGLPVNGHKQVLNASPTKAHNLWS |
| Ga0207713_11218001 | 3300025735 | Switchgrass Rhizosphere | DSGGGPKFHVPRIPFPRAAPRTQPYHCIAHSAFAANATGEGRLAPAFARRGGMDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0207660_100688642 | 3300025917 | Corn Rhizosphere | VDGESVYAAGKLGRKRLINHAVTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEALGRESLGQLFCDEIGGSHAARLGESGLPVNGYKQVLKASPAEAHNVRS |
| Ga0207694_101375853 | 3300025924 | Corn Rhizosphere | MDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMAFMLVRFINYFEALWRESLDQFFCDEIGGSHIARLGERGLPVNGHKQVLNASPAKAHNVRS |
| Ga0210068_10623831 | 3300025953 | Natural And Restored Wetlands | MHATRKLGGKRLIDHAVTLDAGLSFERLRHDIHTEVSLRARPVRGMAFVLVRFINHFEALRHESLGQLLCDEIGGSHIARLGECGLPVNGHKQVLNASPTKAH |
| Ga0210071_10145652 | 3300025955 | Natural And Restored Wetlands | VDGKRMHATRKLGGKRLIDHAVTLDAGLSFERLRHNIHTEVSLPAWPVSGMTFVLVRFINHFEALRHESLGQLLCDEIGGSHIARLGECSLPVNGHKQVLNASPAKAHNVWS |
| Ga0210090_10329282 | 3300025965 | Natural And Restored Wetlands | MHATRKLGGKRLIDHAVTLDAGLSFERLRHNIHTEVSLPAWPVSGMTFVLVRFINHFEALRHESLGQLLCDEIGGSHIARLGECSLPVNGHKQVLNASPAKAHNVWS |
| Ga0207678_116905741 | 3300026067 | Corn Rhizosphere | GVNGEGVDAAGEFSCQRLIDHAVTLDAGLSPERVRYNIHPVVRLPARSVPGMAFMLVRFINHFQALRRESLGQLFCDEIGSLHIARLGECGMPVNGHKQVLNPSPAKAHNVRS |
| Ga0209901_10946192 | 3300026275 | Permafrost Soil | AQSHHCAAHPAIAAQAGGAGGLGPAFPRRGGMDGERVHATGEFTRKCPINHAVALDPGLTFERLRHDIDPVMSLPARPVPGMAFMLVRFVHHLEALRRKSLGQLLCDEIGGSHAARLGEGRARVNACFAAIQWHRSNVKS |
| Ga0256821_10015422 | 3300026452 | Sediment | MHATRKLGGKRLIDHAVTLDAGLSFERLRNDIHTEVSLRSRPVRGMTFVLVRFINHFEALRHESLGQFLCDEIGRSHIARLGECGLPVNGHKQVLNASPAKAHNVWS |
| Ga0207530_1006171 | 3300026655 | Soil | INHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERGLPVNGHKQVLNASPAKAHNVRS |
| Ga0207573_1000491 | 3300026658 | Soil | RLINHAMTLDAGLSLEGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0207495_1043491 | 3300026761 | Soil | HVPRIPFPRAAPRTQPYHCIAHSAFAANATGEGRLAPAFARRGGMDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERGLPVNGHKQVLKASPATAHNVRS |
| Ga0207497_1033321 | 3300026786 | Soil | MHAAGELGCQRLINHAVTLDAGLSFERLRHDIHPEVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNG |
| Ga0207546_1032561 | 3300026806 | Soil | HCIAHSAFAANATGEGRLAPAFARRGGMDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0207529_1000471 | 3300026811 | Soil | FAANATGEGRLAPAFARRGGMDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMAFMLVRFINYFEALWRESLDQFFCDEIGGSHIARLGERGLPVNGHKQVLNASPAKAHNVRS |
| Ga0207518_1052151 | 3300026812 | Soil | MDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGY |
| Ga0207517_10030862 | 3300026826 | Soil | FAANATGEGRLAPAFARRGGMDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0207502_1001023 | 3300026828 | Soil | RGGMDGESVDAAGKLGRKRLINHAMTLDAGLSFERLRHDIHPEVSLPARPVPGMTLVLVRFINHFEALRHESLGQLLCDEIGGSHIARLGERGLPVNGHKQVLKASPATAHNVRS |
| Ga0207583_10005852 | 3300026834 | Soil | TQPYHCIAHSAFAANATGEGRLAPAFARRGGMDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0207570_10015263 | 3300026944 | Soil | GRLAPAFARRGGMDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0207538_10001311 | 3300027122 | Soil | SAFAANATGEGRLAPAFARRGGMDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0207606_1004523 | 3300027178 | Soil | RKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0209981_10526662 | 3300027378 | Arabidopsis Thaliana Rhizosphere | GRKRLINHAVTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEALWRESLGQLFCDEIGGSHIARLGESGLPVNGYKQVLKASPAEAHNVRS |
| Ga0207608_1003342 | 3300027399 | Soil | MDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVK |
| Ga0207609_1002582 | 3300027403 | Soil | MHAAGELGCQRLINHAVTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0207519_1056901 | 3300027411 | Soil | CIAHSAFAANATGEGRLAPAFARRGGMDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0209984_10018902 | 3300027424 | Arabidopsis Thaliana Rhizosphere | MDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEALWRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPAEAHNVRS |
| Ga0207522_1006331 | 3300027425 | Soil | MDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLLCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0207472_1011222 | 3300027427 | Soil | MDGESVDAAGKLGRKRLINHAMTLDAGLSLERLRHDIHPEVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0207493_1012591 | 3300027436 | Soil | ESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0207476_1050791 | 3300027437 | Soil | MDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAH |
| Ga0207564_1001021 | 3300027438 | Soil | PRTQPYHCIAHSAFAANATGEGRLAPAFARRGGMDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0207446_1018941 | 3300027448 | Soil | PKFHVPRIPFPRAAPRTQPYHCIAHSAFAANATGEGRLAPAFARRGGMDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0209968_10162321 | 3300027526 | Arabidopsis Thaliana Rhizosphere | HAAGKLGRKRLINHAVTLDAGLSLKGVRHDIDPVVSLPARPVPGMAFMLVRFINYFEALRRESLDQFFCDEIGGSHIARLGERGLPVNGHKQVLNASPAKAHNVRS |
| Ga0209999_10076122 | 3300027543 | Arabidopsis Thaliana Rhizosphere | VDGESVDPAGKLGRKRLINHAVTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEALWRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0207981_10053953 | 3300027560 | Soil | MDGESVYAAGKLGRKRLINHAVTLDAGLSLEGVRHDIDPVVSLPARPMPGMALMLVRFINHFEALRRESLGQLFCDEIGGSHIARLGERSLPV |
| Ga0209970_10189781 | 3300027614 | Arabidopsis Thaliana Rhizosphere | YLSWIPLPRAAPRAQPYHRIAHSAFAANATGEGRLVSAFAGCGGMDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0210002_10360081 | 3300027617 | Arabidopsis Thaliana Rhizosphere | DTGCEGRLVSAFTGCGCVDGERMHATRELGGKRLIDHTVTLDAGLSFERLRHDIHPEVSLPARPVPGMTFVLVRFINHFEALRHESLGQLLCDEIGDSHIARLGERGLPVNGHKQVLNASPTKAHNVRS |
| Ga0209998_100012237 | 3300027717 | Arabidopsis Thaliana Rhizosphere | GEGRLVSAFARGGSVDGESVDPAGKLGRKRLINHAVTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEALWRESLGQLFCDEIGGSHIARLGESGLPVNGYKQVLKASPAEAHNVRS |
| Ga0209811_100440312 | 3300027821 | Surface Soil | MDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPMPGMALMLVRFINHFEALRRESLGQLFCDEIGGSHIARLGERSLPVNGRKQVLKPSPAKAHNVRS |
| Ga0209974_102634532 | 3300027876 | Arabidopsis Thaliana Rhizosphere | ADTACEGRLVSAFTGCGCVDGERMHATRELGGKRLIDHTVTLDAGLSFERLRHDIHPEVSLPARPVPGMTFVLVRFINHVEALRHESLGQLLCDEIGDSHIARLGERGLPVNGHKQVLNASPTKAHNVRS |
| Ga0207428_103025981 | 3300027907 | Populus Rhizosphere | LINHAVTLDAGLPLERLRHDIHRVVRLPARPMSGMAFMLVRFINNLEALRRESLGQLFCDVISGSHSARLGERGLPVNGHKQVLKASPAKAHNVRS |
| Ga0247750_10343792 | 3300027992 | Soil | AFAANATGEGQLALAFARRGGMDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| Ga0247823_114557561 | 3300028590 | Soil | AFAANATGEGRLAPAFARRGGMDGESVDAAGKLGRKRLINHAVTLDAGLSLEGVRHDIDPVVSLPARPMPGMALMLVRFINHFEALRRESLGQLFCDEIGGSHIARLGGSGLPVNATNKS |
| (restricted) Ga0255311_10006783 | 3300031150 | Sandy Soil | MDGESVYAAGKLGRKRLINHAVTLDAGLSLEGVRHDIDPVVSLPARPVPGMALMLVRFINYFEALRRESLGQLFCDEIGGSHIARLGESGLPVNGYKQVLKASPAEAHNVRS |
| (restricted) Ga0255312_10009285 | 3300031248 | Sandy Soil | MDGESVYAAGKLGRKRLINHAVTLDAGLSLEGVRHDIDPVVSLPARPVPGMALMPVRFINYFEALRRESLGQLFCDEIGGSHIARLGESGLPVNGYKQVLKASPAEAHNVRS |
| Ga0310887_100892782 | 3300031547 | Soil | MDGESVYAAGKLGRKRLINHAVTLDAGLSLEGVRHDIDPVVSLPARPMPGMALMLVRFINHFEALRRESLGQLFCDEIGGSHIARLGERSLPVNGRKQVLKPSPAKAHNVRS |
| Ga0310813_100064725 | 3300031716 | Soil | MHATRKLGGKRLIDHAVALYAGLSFERLRDDIHSEVSLPARPVPGMTLVLVRFINHFEALRHESLGQLLRDEIGGSHIARLGERGLPVNGHKQVLNASPAKAHNVRS |
| Ga0310900_108091931 | 3300031908 | Soil | LEKHGSEGRLVSAFAGRGGMDGESVYAAGKLGRKRLINHAVTLDAGLSLEGVRHDIDPVVSLPARPMPGMALMLVRFINHFEALRRESLGQLFCDEIGGSHIARLGERSLPVNGRKQVLKPSPAKAHNVRS |
| Ga0310885_105201612 | 3300031943 | Soil | MDGESVYAAGKLGRKRLINHAVTLDAGLSLEGVRHDIDPVVSLPARPMPGMALMLVRFINHFEALRRESLGQLFCDEIGGSHIARLGERSLPVNGRKQVL |
| Ga0315910_100688314 | 3300032144 | Soil | MDGESVDPAGKLGRKRLINHAVTLDAGLSLKGVRHDIDPVVRLPARPVPGMALMLVRFINHFEALRRESLGQLFCDEIGGSHIARLGESGLPVNGYKQVLKASPAEAHNVRS |
| Ga0307471_1011422732 | 3300032180 | Hardwood Forest Soil | IPFPRATPRTQPYHCIAHSAFAANATGEGQLALAFARRGGMDGESVDAAGKLGRERLINHAMTLDAGLSLEGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPAKAHNVRS |
| Ga0310896_100569972 | 3300032211 | Soil | MDGESVYAAGKLGRKRLINHAVTLDAGLSLEGVRHDIDPVVSLPARPMPGMALMLVRFINHFEALRRESLGQLFCDEIGGSHIAHLGERSLPVNGRKQVLKPSPAKAHNVRS |
| Ga0335081_106754532 | 3300032892 | Soil | MSGPGFPRPAGVQGQRVDTAFEFGRKNIVDHAMALQPGLPFEGIRHDIDAEVSLPARPVPGMALMLVRFVHHFEALRRESLGQLLCDDIGGPHAAELRIGAAPVNCCCQVLNASSAKAHNVRS |
| Ga0335084_103804852 | 3300033004 | Soil | VNRERVHAAGELGCKRLINHAMTLEAGLSPERVRHNIDPVVSLPARPVPGMTLVLVRFINHFEALRHESLGQLLCDEIGGSHIARLGERGLPVNGHKQVLNASPAKAHNVRS |
| Ga0247829_109766551 | 3300033550 | Soil | MDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMALMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGGSGLPVNATNKS |
| Ga0247830_107301302 | 3300033551 | Soil | AFAANATGEGRLVSAFAGRGGMDGESVYAAGKLGRKRLINHAVTLDAGLSLEGVRHDIDPVVSLPARPMPGMALMLVRFINHFEALRRESLGQLFCDEIGGSHIARLGERSLPVNGRKQVLKPSPAKAHNVRS |
| Ga0373917_0038506_92_391 | 3300034692 | Sediment Slurry | MDGESVYAAGKLGRKRLINHAVTLDAGLSLEGVRHDIDPVVSLPARPVPGMALMLVRFINYFEALRRESLGQLFCDEIGGSHIARLGGSGLPVNATNKS |
| Ga0373948_0011987_1091_1429 | 3300034817 | Rhizosphere Soil | MDGESVDAAGKLGRKRLINHAMTLDAGLSLKGVRHDIDPVVSLPARPVPGMAFMLVRFINHFEVLRRESLGQLFCDEIGGSHIARLGERSLPVNGYKQVLKASPVKAHNVRS |
| ⦗Top⦘ |
|
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |