NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F094081

Metagenome / Metatranscriptome Family F094081

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F094081
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 109 residues
Representative Sequence MADDHRKTLKEEFTDRLEKAKGRLQQSFPEIQQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGAPSN
Number of Associated Samples 103
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 77.78 %
% of genes near scaffold ends (potentially truncated) 16.98 %
% of genes from short scaffolds (< 2000 bps) 16.98 %
Associated GOLD sequencing projects 99
AlphaFold2 3D model prediction Yes
3D model pTM-score0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (97.170 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil
(20.952 % of family members)
Environment Ontology (ENVO) Unclassified
(27.358 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.340 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 64.89%    β-sheet: 0.00%    Coil/Unstructured: 35.11%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF01590GAF 5.66
PF04226Transgly_assoc 4.72
PF03411Peptidase_M74 2.83
PF13628DUF4142 1.89
PF11026DUF2721 0.94
PF01152Bac_globin 0.94
PF00230MIP 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG2261Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein familyGeneral function prediction only [R] 4.72
COG3770Murein endopeptidase MepA (D-alanyl-D-alanine-endopeptidase)Cell wall/membrane/envelope biogenesis [M] 2.83
COG0580Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)Carbohydrate transport and metabolism [G] 0.94
COG2346Truncated hemoglobin YjbIInorganic ion transport and metabolism [P] 0.94


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A97.17 %
All OrganismsrootAll Organisms2.83 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005159|Ga0066808_1026523Not Available590Open in IMG/M
3300005328|Ga0070676_10850756Not Available676Open in IMG/M
3300005526|Ga0073909_10028104All Organisms → cellular organisms → Bacteria1899Open in IMG/M
3300006196|Ga0075422_10028028All Organisms → cellular organisms → Bacteria1949Open in IMG/M
3300006847|Ga0075431_102067717Not Available524Open in IMG/M
3300009101|Ga0105247_10679239Not Available773Open in IMG/M
3300010048|Ga0126373_12846473Not Available540Open in IMG/M
3300010401|Ga0134121_10176359All Organisms → cellular organisms → Bacteria1837Open in IMG/M
3300012882|Ga0157304_1016497Not Available894Open in IMG/M
3300012984|Ga0164309_10963885Not Available700Open in IMG/M
3300015372|Ga0132256_102115400Not Available668Open in IMG/M
3300018081|Ga0184625_10540054Not Available581Open in IMG/M
3300020006|Ga0193735_1035048Not Available1526Open in IMG/M
3300026088|Ga0207641_10731667Not Available976Open in IMG/M
3300026121|Ga0207683_12095676Not Available514Open in IMG/M
3300027440|Ga0207571_100463Not Available839Open in IMG/M
3300028379|Ga0268266_11094068Not Available771Open in IMG/M
(restricted) 3300031197|Ga0255310_10075795Not Available890Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil20.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.57%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.71%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere4.76%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere4.76%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.81%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.86%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.86%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.90%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.90%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.90%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.90%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.90%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.90%
SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment0.95%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.95%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.95%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.95%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.95%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.95%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.95%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.95%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.95%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.95%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.95%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.95%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459013Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cmEnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300002067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1Host-AssociatedOpen in IMG/M
3300002633Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A1-12Host-AssociatedOpen in IMG/M
3300003383Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AMHost-AssociatedOpen in IMG/M
3300004061Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004803Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005159Soil and rhizosphere microbial communities from Laval, Canada - mgLPBEnvironmentalOpen in IMG/M
3300005213Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2EnvironmentalOpen in IMG/M
3300005288Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1Host-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012477Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610Host-AssociatedOpen in IMG/M
3300012491Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610Host-AssociatedOpen in IMG/M
3300012500Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610Host-AssociatedOpen in IMG/M
3300012505Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610Host-AssociatedOpen in IMG/M
3300012515Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610Host-AssociatedOpen in IMG/M
3300012517Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610EnvironmentalOpen in IMG/M
3300012882Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018029Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MGEnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300019869Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300023057Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6EnvironmentalOpen in IMG/M
3300023102Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026452Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU4EnvironmentalOpen in IMG/M
3300026725Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G07A5-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026740Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A1w-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026753Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A4a-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026763Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A4-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026773Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5-11 (SPAdes)EnvironmentalOpen in IMG/M
3300026806Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A4a-10 (SPAdes)EnvironmentalOpen in IMG/M
3300026807Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A5-11 (SPAdes)EnvironmentalOpen in IMG/M
3300026812Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A3-10 (SPAdes)EnvironmentalOpen in IMG/M
3300026903Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A1-11 (SPAdes)EnvironmentalOpen in IMG/M
3300026944Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K2-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027036Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G07A5-10 (SPAdes)EnvironmentalOpen in IMG/M
3300027395Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027403Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A5-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027411Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027430Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A1-10 (SPAdes)EnvironmentalOpen in IMG/M
3300027431Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A1a-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027440Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G08K2-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027444Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A1w-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027455Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G06K3-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027523Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)EnvironmentalOpen in IMG/M
3300027617Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027717Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300030844Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
N57_082988502170459013Grass SoilMTNDQGKTLKEEFIDRLEKAKGRLQQSFPEIQQLIKTSNAVEVARKLIDPAQSIFKQFADDIQLKXLFAKAEALVANANLTFTKAVSKDTSPTETFQDETL
JGI11643J12802_1214314613300000890SoilTLKEEPADRLGKAKGRLQRSFPEIQQRFRTSNAVDVARKIIDPAQLLFRQFADDIQLKDLLAKAESLVANANLALTRTVLKEPP
JGI24735J21928_1025894013300002067Corn RhizosphereMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIRQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGAPSSEPSAKKAGVKKTP
JGI25463J38534_1003923300002633MRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTETSP
JGI26140J50224_10417413300003383Arabidopsis Thaliana RhizosphereMRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTETSPSETPASKLPSKKASLKKAPSKGVRSRKPLKKTPLKTRRT
Ga0055487_1006627613300004061Natural And Restored WetlandsMADDQKKTLKKEEFGDRLDKAKGRLQQSFPEIQQLVRTSNAVDVARKIIDPAQAIFRQFADDIQLKDLLAKAEALVARSDLAFMKTVPKDIPPTETS
Ga0062593_10173974513300004114SoilMTDDREKTKKEEFAGRVGKAKGRLQQSFPEIQQLIRATNAVDVARKIIDPAQAIFRQFADDIQLKDLLAKAEALVANTDLPFRKPVPKDAP
Ga0062595_10002550913300004479SoilMRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTETSPSETPASKLPSKKASLKKAPSKGVRSRKPLKK
Ga0062595_10159539513300004479SoilMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIRQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIG
Ga0058862_1138297723300004803Host-AssociatedMRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTETS
Ga0066808_102652313300005159SoilMTGDQGKTLKEEFIDRLEKAKGRLQQSFPEIQQRVKTSSAVEVARKIIDPAQSIFKQFADDIQLKGLFAKAEALVALANPTFSKAVSKDIPPMEASRDETSSNGSSMKAGVKKTSSKGPRLKKAVPKKTLS
Ga0068998_1010748913300005213Natural And Restored WetlandsMTDDQGKTLKEEFIDRLEKAKGRVQQSFPEIQQLIKTSNAVEVARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANANLTFTKAVSKDTPPTETFGDETSSNESSKKAGVRKT
Ga0065714_1030412513300005288Miscanthus RhizosphereMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIRQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGAPSNEP
Ga0070676_1085075623300005328Miscanthus RhizosphereMTDDREKTKKEEFAGRVGKAKGRLQQSFPEIQQLIRATNAVDVARKIIDPAQAIFRQFADDIQLKDLLAKAEALVANTDLPFRKPVPKDAPPPETFRDQTSPSESSPSVKKSPAKRARLKKAVPK
Ga0070670_10000623723300005331Switchgrass RhizosphereMRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTETSPSETPASKLPSKKASLKKAPSKGVRSRKPLKKTPLKGGRLNEE*
Ga0068869_10036017843300005334Miscanthus RhizosphereMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIQQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGAPSNEPSAKKAGVKKT
Ga0070662_10134026013300005457Corn RhizosphereMTDDREKTKKEEFAGRVGKAKGRLQQSFPEIQQLIRATNAVDVARKIIDPAQAIFRQFADDIQLKDLLAKAEALVANTDLPFRKPVPKDAPPPETFRDQTSPSESSPSVKKSPAK
Ga0070706_10144860513300005467Corn, Switchgrass And Miscanthus RhizosphereMTDDRKKTFKEKPAGRLDKAKGRLQQPFPEIQHLVRTSNALEVARKIIDPAQLLFRQFADDIQLKDLIAKAESLVANANLAFTKTGSKEPPPEQTFRDETPSNEPSRKAAAVRKKP
Ga0070699_10070512413300005518Corn, Switchgrass And Miscanthus RhizosphereMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIQQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIG
Ga0070699_10082339123300005518Corn, Switchgrass And Miscanthus RhizosphereMTDDRKKTFKEKPADRLDKAKGRLQQSFPEIQHLVRTSNALDVARKIIDPAQLLFRQFADDIQLKDLLAKAESLVANANLAFTRTVLKEPPPA
Ga0073909_1002810413300005526Surface SoilMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIRQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGAPSSEPSAKKAGVKKTPSKGTRLKKAVPKKTLSKK
Ga0070696_10101864213300005546Corn, Switchgrass And Miscanthus RhizosphereMTDDRKKTFKEKPAGRLDKAKGRLQQSFPEIQHLVRTSNALDVARKIIDPAQLLFRQFADDIQLKDLLAKAESLVANANLAFTKTVLKEPPPADTFRGETPS
Ga0070704_10090767523300005549Corn, Switchgrass And Miscanthus RhizosphereMTDDREKTKKEEFAGRVGKAKGRLQQSFPEIQQLIRATNAVDVARKIIDPAQAIFRQFADDIQLKDLLAKAEALVANTDLPFRKPVPKDAPPPETFRDQTSPSESSPSVKKSPAKRAR
Ga0070664_10125812233300005564Corn RhizosphereMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIQQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGA
Ga0068851_1007886833300005834Corn RhizosphereMRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASK
Ga0075024_10057141513300006047WatershedsMADDQEKAFKKELMERLDKAKGRLQQALPEIQQLIKTSNVVEVARKITDPAQSIFKQFADDIQLKDLFAKAEALVANANLNFAKTISKDAPSTQVFP
Ga0075422_1002802853300006196Populus RhizosphereMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIRQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGAPSSEPSAKKAGVKKTPSKGTRLKKAVPK
Ga0075431_10206771723300006847Populus RhizosphereMTDDRKKTLKEEPADRLGKAKGRLQQSFPEIQHLVRTSNALEVARKIIDPAQLLFRQFADDIQLKDLLAKAESLVANANLALTRTVLKEPPPADAFRDQAPSNEPAKKAAARKTPSKATRLKKAAPKKP
Ga0079219_1066831913300006954Agricultural SoilMADDQGKTGKEQVSGRLDKAKGRLQQSLPDIQQLVRASGALDVARKIIDPAQSIFRQFADDIQLKDLLAKAEALVASVSKDAPPAPAVRGQAPPGESAKEAA
Ga0105247_1067923933300009101Switchgrass RhizosphereMTDDRTKTSKKEDRLEKARGRLQQSFPEIQQLIKTSNAVDVARKIIDPAQSLFKQFADDIQLKDLLAKAEELFATNLGLPKVAPKAAPATQAFRNAPSSNESSGRVAVKKTPSKGSRLKKAVPKKTLSKK
Ga0075423_1001744513300009162Populus RhizosphereMRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSDSRDTPPTETSPSETPASKLQSKK
Ga0105249_1281472313300009553Switchgrass RhizosphereMTDDREKTKKEEFAGRVGKAKGRLQQSFPEIQQLIRATNAVDVARKRIDPAQAIFRQFADDIQLKDLLAKAEALVANTDLPFRKPVPKDAPPPETFRDQTSP
Ga0126380_1104568323300010043Tropical Forest SoilMTDDQEKAFKKDLIDRLDKAKGRLQHSFPQIQQLIKTSNVVETARKIIDPAQSVFKQFANDIQLKDLVAKAKALVATADPTVMKAVLKDTPLTGRFPNETPANEFPSNKASLKKASSKGVRPKKPL
Ga0126373_1284647323300010048Tropical Forest SoilMTDDQEKAFKKDLIDRLDKAKGRLQQSFPEIQQLIKTSNVVEAARKIIDPAQSIFQQFASDIQLKDLLAKAEALVANANLTFAKAVSKDTPP
Ga0126376_1143959323300010359Tropical Forest SoilMTDDQEKAFKKDLIDRLDKAKGRLQHSFPQIQQLIKTSNVVETARKIIDPAQSVFKQFANDIQLKDLVAKAKALVATADPTVMKAVLKDTPITGTFPNETPTNELPSNKASLKKAPP
Ga0126372_1250926423300010360Tropical Forest SoilMTNDQERAFKKDLIDRLDKAKGRLQQSFPEIQQLIKTSNVVEAARKIIDPAQSIFQQFASDIQLKDLLAKAEALVANANLTLAKAVSKDTPPTETFLN
Ga0105239_1045899753300010375Corn RhizosphereMTDDRTKTSKKEDRLEKARGRLQQSFPEIQQLIRTSNAVDVARKIIDPAQALFKQFADDIQLKDLLAKAEELFATNLGLPKAAPKAAP
Ga0134121_1017635963300010401Terrestrial SoilMTDDRTKTSKKEDRLEKARGRLQQSFPEIQQLIKTSNAVDVARKIIDPAQALFKQFADDIQLKDLLAKAEELFATNLGLPKAAPKAAPATQAFRDAPASNESSGRVAVKKTPSKGSRLKKAVPK
Ga0134123_1081836913300010403Terrestrial SoilMTDDREKTKKEEFAGRVGKAKGRLQQSFPEIQHLVRTSNALDVARKIIDPAQLLFRQFADDIQLKDLLAKAESLVANANLAFTRTVLKEPPPAFTFRDQTPSNEPSGKAAVKRTPSKAAR
Ga0137376_1047581823300012208Vadose Zone SoilMADDHEKTFKKDVIERLGKAKGRLRQSFPEMQQLIKTSNVVEAARKIIDPAHSIFQQFADDVQLKDLLAKAEAIVVKANLTVAKTVSKDTSPAETFQNETPANVFPSKKAVLKKAPSKGLRPKKPL*
Ga0157336_103378523300012477Arabidopsis RhizosphereMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIRQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPI
Ga0157329_100113423300012491Arabidopsis RhizosphereMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIRQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGAPSSEPSAKKAGVKKTP*
Ga0157314_101978133300012500Arabidopsis RhizosphereMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIRQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEAR
Ga0157339_100829143300012505Arabidopsis RhizosphereMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIRQTIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGAPSSEPSAK
Ga0157338_105721123300012515Arabidopsis RhizosphereMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIRQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGAPSSEPSAKKAGVKKT
Ga0157354_100929623300012517Unplanted SoilMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIRQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGAPSSEPSAKKAGVKK
Ga0157304_101649713300012882SoilMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIQQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGAPSNEPSAKKAGVKKTPSRGT
Ga0164241_1135320323300012943SoilMRDDQEKTLKKGFVERFDKAKGRLQRSVPEIQQLIKTPNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVAKANLAVAKAVSRDTPPTETSPNETPASKFPSKKASLKKAPSKGV
Ga0164299_1005975013300012958SoilMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIRQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEA
Ga0164309_1096388533300012984SoilMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIRQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGAPSSEPSAKKAGVKKTPSKGTRLKKAVPKKTL
Ga0132256_10211540013300015372Arabidopsis RhizosphereMTDDREKTKKEEFAGRIGKAKGRLPQSFPEIQQLIRATNAVDVARKIIDPAQAIFRQFADDIQLKVLLAKAEALVANTDLPFRKPVPKDPPPAQTFRDVTPSAESSGTAPVKTTPAKRARVKKAGPKKTVSKKK
Ga0132257_10278553113300015373Arabidopsis RhizosphereMMDDQKKTSKKEDRLEKAKGRLQQSFPEIQQLIRTSNAVDVARKIIDPAQSIFRQFAEDIQLKDLLAKAEALVANTNLAFTKPVPKATPPARTFRDETLASES
Ga0132255_10099849213300015374Arabidopsis RhizosphereMTGDQGKTLKEEFIDRLEKAKGRLQQSFPEIQQRVKTSSAVEVARKIIDPAQSIFKQFADDIQLKGLFAKAEALVARANPTFSKAVSKDIPPMEAS
Ga0182039_1015668243300016422SoilMTNDQERAFKKDLVDRLDKAKGRLQQSFPEIQQLIKTSNVVEAARKIIDPAQSIFQQFASDIQLKDLLAKAEALVANANLTFAKAVSKDTPPTETFLNEA
Ga0187777_1080101113300017974Tropical PeatlandMTDDQEKAFKKDLIDRLDKAKGRLQQSFPEIQQLIKTSNVVETARKIIEPAQSVFRQFANDIQLKDLVARAKALVATADLTAMKAVLKDTPLTRTFPNETPTNELPSNKASLKKVPPK
Ga0184608_1036403713300018028Groundwater SedimentEKTFKKDVIERLGKAKGRLRQSFPEMQQLIKTSNVVEAARKIIDPAHSIFQQFADDVQLKDLLAKAEAIVVKANLTVAKTVSKDTSPAETFQNETPANVFPSKKAVLKKAPSKGLRPKKP
Ga0187787_1021967823300018029Tropical PeatlandMTDDQEKAFRKDLVERLDKAKVRLQQSFPEIQQLIKISNVVEAARKIIEPAQSIFKQFASDIQLKDLLAKAEALVAKANLTVAKAVSSGAPPTETAPNETPANKLPSKEANLIKRAPSKGVRPKRSLKKKTPLKKTK
Ga0184625_1054005413300018081Groundwater SedimentMADDHEKTYKKDVIERLGKAKGRLRQSFPEMQQLIKTSNVVEAARKIIDPAHSIFQHFADDVQLKDLLAKAEAIVVKANLTVAKTVSKDTSPAETFQNETPANVFPSKK
Ga0193705_108355613300019869SoilQSFPEMQQLIKRSNVVEAARKIIDPAHSIFQQFADDVQLKDLLAKAEAIVVKANLTVAKTVSKDTSPAETFQNETPANVFPSKKAVLKKAPSKGLRPKKPL
Ga0193735_103504813300020006SoilMADDHEKTFKKDVIERLGKAKGRLRQSFPEMQQLIKTSNVVEAARKIIDPAHSIFQQFADDVQLKDLLAKAEAIVVKANLTVAKTVS
Ga0193721_101354823300020018SoilMADDHEKTFKKDVIERLGKAKGRLRQSFPEMQQLIKRSNVVEAARKIIDPAHSIFQQFADDVQLKDLLAKAEAIVVKANLTVAKTVSKDTSPAETFQNETPANVFPSKKAVLKKAPSKGLRPKKPL
Ga0247797_101481023300023057SoilMRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTETSPSETPASKLPSKKASLKKAPSKGVRSRKPLKKTPLK
Ga0247754_100437223300023102SoilMRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTETSPSETPASKLPSKKASLKKAPSKGVRSRKPLKKTPLKGGRLNEE
Ga0207653_1040065413300025885Corn, Switchgrass And Miscanthus RhizosphereMTDDRKKTFKEKPADRLDKAKGRLQQSFPEIQHLVRTSNALDVARKIIDPAQLLFRQFADDIQLKDLLAKAESLVANANLAFTRTVL
Ga0207642_1082026913300025899Miscanthus RhizosphereMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIRQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLT
Ga0207710_1046662823300025900Switchgrass RhizosphereMTDDRTKTSKKEDRLEKARGRLQQSFPEIQQLIKTSNAVDVARKIIDPAQSLFKQFADDIQLKDLLAKAEELFATNLGLPKVAPKAAPAT
Ga0207645_1106408113300025907Miscanthus RhizosphereMTDDREKTKKEEFAGRVGKAKGRLQQSFPEIQQLIRATNAVDVARKIIDPAQAIFRQFADDIQLKDLLAKAEALVANTDLPFRKPVPKDAPPPETFRDQTSPSESSPSPRVDRI
Ga0207660_1098619613300025917Corn RhizosphereMTDDRKKTSKEESAGRLDKAKGRLQQSFPEIQHLVRTSNALDVARKIIDPAQLLFRQFADDIQLKDLLAKAESLVANANLAFTRTVLKEPPPADTFRGETPSNEPPRKA
Ga0207690_1047219013300025932Corn RhizosphereMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIRQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGAPSSEPSAKK
Ga0207689_1039113033300025942Miscanthus RhizosphereMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIQQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTE
Ga0207677_1088086913300026023Miscanthus RhizosphereMTDDRKKTSKKEDRLEKAKGRLQQSFPEIQQLIRTSNAVDVARKIIDPAQSLFKQFADDIQLKDLLAKAEELFATNLGLPKAAPKAAPATQAFRDAPASN
Ga0207703_1110911913300026035Switchgrass RhizosphereMTDDRKKTSKKEDRLEKARGRLQQSFPEIQQLIRTSNAVDVARKIIDPAQSLFKQFADDIQLKDLLAKAEELFATNLGLPKGAPKAAPATQAFRDAPSSNESSGRVAVRKTPS
Ga0207641_1073166713300026088Switchgrass RhizosphereMTDDRTKTSKKEDRLEKARGRLQQSFPEIQQLIRTSNAVDVARKIIDPAQSLFKQFADDIQLKDLLAKAEELFATNLGLPKVAPKAAPATQAFRDAPSSNESSGRVAVRKTPSKGSRLKKEVPKKTLSKKKTT
Ga0207683_1209567613300026121Miscanthus RhizosphereMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIRQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGAPSSEPSAKKAGVKKTPSKGTRLKKAV
Ga0256821_102390923300026452SedimentMADDQKKTLKKEEFGDRLDKAKGRLQQSFPEIQQLVRTSNAVDVARKIIDPAQAIFRQFADDIQLKDLLAKAEALVARSDLAFMKTVPKDIPPTETSRDTTSPGGP
Ga0207474_10344313300026725SoilMRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTETSPSETPAS
Ga0207439_10390913300026740SoilMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIQQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGAPSNEPSAKKAGVKKTPSR
Ga0207528_10269013300026753SoilMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIRQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGAP
Ga0207568_10638513300026763SoilMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIRQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANL
Ga0207566_10361623300026773SoilMRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTETSPSETPASKLPSKKASLKKAPSKGVRSRKPLKKTPL
Ga0207546_10281023300026806SoilMRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTE
Ga0207547_10503713300026807SoilMRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTETSPSETPASKLPSKKASLKKAPSKGVRSRKPLKKTPLKTR
Ga0207518_10502513300026812SoilMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIQQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRD
Ga0207462_100648613300026903SoilMRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTETSPSETPASKLPSKK
Ga0207570_101196733300026944SoilMTDDRKKTFKEKPADRLDKAKGRLQQSFPEIQQLIRATNAVDVARKIIDPAQAIFRQFADDIQLKDLLAKAEALVANTDLPFRKPVPKDAPPPETF
Ga0207467_100302413300027036SoilMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIQQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKA
Ga0207467_101744413300027036SoilMRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTETSPSETPASKLPSKKASLKKAPSKGVRSRKPLKKAPLKT
Ga0209996_102431533300027395Arabidopsis Thaliana RhizosphereMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIQQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTFTKAVSKDAPPAQTFRDETSSNESSKKP
Ga0207609_10360013300027403SoilMRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTETSPSETPASKLPSKKASLKKAPSKGVRS
Ga0207519_10330713300027411SoilMRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANANLTLTKAASKDAAPTEAR
Ga0207561_10421123300027430SoilMRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTET
Ga0207437_10159223300027431SoilMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIQQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGAPSNEPSAKK
Ga0207571_10046313300027440SoilMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIQQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGALSNEPSAKKAGVKKTPSRG
Ga0207468_100172213300027444SoilMRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTETSPSETPASKLPSKKASLKKAPSKGVRSRKPLKKTPLKTRR
Ga0207504_10104323300027455SoilMRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTETSPSETPASKLPSKKAS
Ga0208890_105214733300027523SoilMADDHRKTLKEEFTDRLEKAKGRLQRSFPEIQQLIKTSNAVEVARKIIDPAQSIFKQFADDIQLKDLLAKAEALVANANLPF
Ga0210002_108180713300027617Arabidopsis Thaliana RhizosphereMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIQQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGAPSN
Ga0209998_10000337163300027717Arabidopsis Thaliana RhizosphereMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIQQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAAS
Ga0209974_1028358523300027876Arabidopsis Thaliana RhizosphereMTDDRKKTFKEEPADRLEKAKGRLQRSFPEIQQRFRTSNAVDVARKIIDPAQLLFRQFADDIQLKDLIAKAESLVANANLPFTRTVLKEPPPADTFRDQAPS
Ga0268266_1109406833300028379Switchgrass RhizosphereMADDHRKTLKEEFTDRLEKAKGRLQQSFPEIRQSIKTSGAVEAARKIIDPAQSIFKQFADDIQLKDLIAKAEALVANANLTLTKAASKDAAPTEARPIGAPSNEPSAKKAGVKKTPSRGTRLKK
Ga0307305_1027681213300028807SoilMADDHEKTFKKDVIERLGKAKGRLRQSFPEMQQLIKTSNVVEAARKIIDPAHSIFQQFADDVQLKDLLAKAEAIVVKANLTVAKTVSKDTSPAETFQNETPANVFPSKKAVLKKAPSKGLRPKKPL
Ga0075377_1165991313300030844SoilMIDDQEKVFKKDLIDRLDKAKGRLQQSFPEIQQLIQTSNVVEAARKLIDPAQSIFKQFANDIQLKDLLAKAEALVARANLSVAKAVSKDTRPTETSPNQMPATNYHQRRRF
(restricted) Ga0255310_1007579523300031197Sandy SoilMADDHRKTLKEEFADRLEKAKGRLQQSFPEIPQSIKTSGAVEVARKIIDPAHSILKQFADDIQLKDLIAKAEALVANANLTLTKADSKDAAPTEARPIEAPSNEPPAKKAGVKKVPSKGARLKKA
Ga0310813_1072483013300031716SoilMTDDQKKTSKKEELGDRLEKAKGRLQQSFPDIQQLIKTSNAVDIARKIIDPAQSLFKQFADDIQLKDLLAKAEELFATNLGLPKVAPKAAPATQAFRDAPSSNESSGRVAVKKTP
Ga0310904_1024436933300031854SoilMTGDQGKTLKEEFIDRLEKAKGRLQQSFPEIQQRVKTSSAVEVARKIIDPAQSIFKQFADDIQLKGLFAKAEALVARANPTFSKAVSKDIPPTE
Ga0306926_1014916113300031954SoilMTNDQERAFKKDLVDRLDKAKGRLQQSFPEIQQLIKTSNVVEAARKIIDPAQSIFQQFASDIQLKDLLAKAEALVANANLTFAKAVSKDTPPTETFLNEAPA


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