NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Sample 3300027108

3300027108: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF030 (SPAdes)



Overview

Basic Information
IMG/M Taxon OID3300027108 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0085736 | Gp0057311 | Ga0207946
Sample NameForest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF030 (SPAdes)
Sequencing StatusPermanent Draft
Sequencing CenterDOE Joint Genome Institute (JGI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size29485831
Sequencing Scaffolds83
Novel Protein Genes97
Associated Families93

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1
All Organisms → cellular organisms → Bacteria9
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → environmental samples → uncultured Microvirga sp.1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_71
All Organisms → cellular organisms → Bacteria → Proteobacteria3
Not Available38
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium11
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium6
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1
All Organisms → cellular organisms → Bacteria → Acidobacteria1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameForest Soil Microbial Communities From Harvard Forest Long Term Ecological Research (Lter) Site In Petersham, Ma, For Long-Term Soil Warming Studies
TypeEnvironmental
TaxonomyEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil → Forest Soil Microbial Communities From Harvard Forest Long Term Ecological Research (Lter) Site In Petersham, Ma, For Long-Term Soil Warming Studies

Alternative Ecosystem Assignments
Environment Ontology (ENVO)forest biomesolid layerforest soil
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Soil (non-saline)

Location Information
LocationHarvard Forest LTER, Petersham, MA, USA
CoordinatesLat. (o)42.471116Long. (o)-72.209488Alt. (m)N/ADepth (m)0 to .1
Location on Map
Zoom:    Powered by OpenStreetMap ©


Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F000083Metagenome / Metatranscriptome2471Y
F000098Metagenome / Metatranscriptome2300Y
F000277Metagenome / Metatranscriptome1389Y
F000327Metagenome / Metatranscriptome1293Y
F000454Metagenome / Metatranscriptome1118Y
F001261Metagenome / Metatranscriptome735Y
F001362Metagenome / Metatranscriptome714Y
F001908Metagenome / Metatranscriptome619Y
F002263Metagenome / Metatranscriptome577Y
F002561Metagenome / Metatranscriptome548Y
F002592Metagenome / Metatranscriptome545Y
F002656Metagenome / Metatranscriptome539N
F002899Metagenome / Metatranscriptome522Y
F003045Metagenome / Metatranscriptome511Y
F003243Metagenome / Metatranscriptome498Y
F003968Metagenome / Metatranscriptome459Y
F003969Metagenome / Metatranscriptome459Y
F004028Metagenome / Metatranscriptome456Y
F004146Metagenome / Metatranscriptome451Y
F006238Metagenome / Metatranscriptome378Y
F006519Metagenome / Metatranscriptome371Y
F007200Metagenome / Metatranscriptome356Y
F007656Metagenome / Metatranscriptome347Y
F008164Metagenome / Metatranscriptome338Y
F008633Metagenome / Metatranscriptome330Y
F009926Metagenome / Metatranscriptome311Y
F012799Metagenome / Metatranscriptome277Y
F013363Metagenome / Metatranscriptome272Y
F016213Metagenome / Metatranscriptome249Y
F016711Metagenome / Metatranscriptome245Y
F017181Metagenome / Metatranscriptome242Y
F017213Metagenome / Metatranscriptome242Y
F018233Metagenome / Metatranscriptome236Y
F018255Metagenome / Metatranscriptome236Y
F018419Metagenome / Metatranscriptome235Y
F019377Metagenome / Metatranscriptome230Y
F019530Metagenome / Metatranscriptome229Y
F019638Metagenome / Metatranscriptome228N
F020099Metagenome / Metatranscriptome226N
F021343Metagenome / Metatranscriptome219Y
F023444Metagenome / Metatranscriptome210Y
F025098Metagenome / Metatranscriptome203N
F025131Metagenome / Metatranscriptome203Y
F025810Metagenome / Metatranscriptome200Y
F026504Metagenome / Metatranscriptome197Y
F026997Metagenome / Metatranscriptome196Y
F027622Metagenome / Metatranscriptome194Y
F027929Metagenome / Metatranscriptome193Y
F028020Metagenome / Metatranscriptome193Y
F028450Metagenome / Metatranscriptome191Y
F029542Metagenome / Metatranscriptome188Y
F029910Metagenome / Metatranscriptome187Y
F030540Metagenome / Metatranscriptome185Y
F031238Metagenome / Metatranscriptome183Y
F035922Metagenome / Metatranscriptome171N
F037440Metagenome / Metatranscriptome168Y
F038357Metagenome / Metatranscriptome166Y
F038832Metagenome / Metatranscriptome165Y
F038834Metagenome / Metatranscriptome165Y
F039840Metagenome / Metatranscriptome163N
F041892Metagenome / Metatranscriptome159Y
F041900Metagenome / Metatranscriptome159Y
F044087Metagenome / Metatranscriptome155Y
F047236Metagenome / Metatranscriptome150Y
F047294Metagenome / Metatranscriptome150Y
F049783Metagenome / Metatranscriptome146Y
F050559Metagenome / Metatranscriptome145Y
F052843Metagenome / Metatranscriptome142N
F055945Metagenome / Metatranscriptome138Y
F055962Metagenome / Metatranscriptome138Y
F056865Metagenome / Metatranscriptome137N
F059232Metagenome / Metatranscriptome134N
F063010Metagenome / Metatranscriptome130N
F063046Metagenome / Metatranscriptome130Y
F063051Metagenome130Y
F067016Metagenome / Metatranscriptome126Y
F067995Metagenome125Y
F069391Metagenome124Y
F069781Metagenome123Y
F069869Metagenome / Metatranscriptome123Y
F070623Metagenome / Metatranscriptome123N
F072713Metagenome / Metatranscriptome121N
F076553Metagenome / Metatranscriptome118N
F080307Metagenome / Metatranscriptome115N
F083795Metagenome / Metatranscriptome112N
F090827Metagenome / Metatranscriptome108N
F092641Metagenome / Metatranscriptome107N
F092668Metagenome / Metatranscriptome107N
F092820Metagenome / Metatranscriptome107N
F095279Metagenome105N
F098120Metagenome / Metatranscriptome104Y
F099801Metagenome / Metatranscriptome103N
F099817Metagenome / Metatranscriptome103Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0207946_100032All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3242Open in IMG/M
Ga0207946_100114All Organisms → cellular organisms → Bacteria2471Open in IMG/M
Ga0207946_100274All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium1958Open in IMG/M
Ga0207946_100305All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → environmental samples → uncultured Microvirga sp.1900Open in IMG/M
Ga0207946_100347All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1823Open in IMG/M
Ga0207946_100370All Organisms → cellular organisms → Bacteria1786Open in IMG/M
Ga0207946_100491All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1645Open in IMG/M
Ga0207946_100570All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_71569Open in IMG/M
Ga0207946_100571All Organisms → cellular organisms → Bacteria → Proteobacteria1568Open in IMG/M
Ga0207946_100643Not Available1509Open in IMG/M
Ga0207946_101066All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1267Open in IMG/M
Ga0207946_101227Not Available1211Open in IMG/M
Ga0207946_101258All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1197Open in IMG/M
Ga0207946_101538Not Available1109Open in IMG/M
Ga0207946_101608All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1086Open in IMG/M
Ga0207946_101616All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1084Open in IMG/M
Ga0207946_101651All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1074Open in IMG/M
Ga0207946_101659Not Available1072Open in IMG/M
Ga0207946_101682All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1068Open in IMG/M
Ga0207946_101732All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium1053Open in IMG/M
Ga0207946_101853Not Available1024Open in IMG/M
Ga0207946_102048Not Available980Open in IMG/M
Ga0207946_102080All Organisms → cellular organisms → Bacteria → Proteobacteria976Open in IMG/M
Ga0207946_102162Not Available962Open in IMG/M
Ga0207946_102231Not Available951Open in IMG/M
Ga0207946_102377All Organisms → cellular organisms → Bacteria925Open in IMG/M
Ga0207946_102389All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium924Open in IMG/M
Ga0207946_102526Not Available905Open in IMG/M
Ga0207946_102531Not Available903Open in IMG/M
Ga0207946_103094All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales829Open in IMG/M
Ga0207946_103413All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium797Open in IMG/M
Ga0207946_103560All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi780Open in IMG/M
Ga0207946_103574Not Available778Open in IMG/M
Ga0207946_103590Not Available777Open in IMG/M
Ga0207946_103998All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium741Open in IMG/M
Ga0207946_104049Not Available738Open in IMG/M
Ga0207946_104451Not Available709Open in IMG/M
Ga0207946_104526Not Available704Open in IMG/M
Ga0207946_104547All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium703Open in IMG/M
Ga0207946_104579Not Available701Open in IMG/M
Ga0207946_104854All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales683Open in IMG/M
Ga0207946_104920All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium678Open in IMG/M
Ga0207946_104967Not Available676Open in IMG/M
Ga0207946_105168Not Available664Open in IMG/M
Ga0207946_105220Not Available661Open in IMG/M
Ga0207946_105818Not Available631Open in IMG/M
Ga0207946_105863All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium628Open in IMG/M
Ga0207946_105865All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium628Open in IMG/M
Ga0207946_105963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia624Open in IMG/M
Ga0207946_106045Not Available620Open in IMG/M
Ga0207946_106084Not Available618Open in IMG/M
Ga0207946_106127All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium616Open in IMG/M
Ga0207946_106417All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium604Open in IMG/M
Ga0207946_106504All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium600Open in IMG/M
Ga0207946_106538All Organisms → cellular organisms → Bacteria599Open in IMG/M
Ga0207946_106590Not Available597Open in IMG/M
Ga0207946_106599Not Available597Open in IMG/M
Ga0207946_106636All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium595Open in IMG/M
Ga0207946_106725All Organisms → cellular organisms → Bacteria → Acidobacteria590Open in IMG/M
Ga0207946_106889Not Available585Open in IMG/M
Ga0207946_107443All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium567Open in IMG/M
Ga0207946_107454All Organisms → cellular organisms → Bacteria566Open in IMG/M
Ga0207946_107484All Organisms → cellular organisms → Bacteria566Open in IMG/M
Ga0207946_107568All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium563Open in IMG/M
Ga0207946_107618All Organisms → cellular organisms → Bacteria561Open in IMG/M
Ga0207946_107732Not Available558Open in IMG/M
Ga0207946_108042All Organisms → cellular organisms → Bacteria → Proteobacteria548Open in IMG/M
Ga0207946_108305Not Available540Open in IMG/M
Ga0207946_108377Not Available538Open in IMG/M
Ga0207946_108444Not Available536Open in IMG/M
Ga0207946_108721Not Available528Open in IMG/M
Ga0207946_108766Not Available527Open in IMG/M
Ga0207946_108919Not Available523Open in IMG/M
Ga0207946_109151Not Available518Open in IMG/M
Ga0207946_109226Not Available516Open in IMG/M
Ga0207946_109261Not Available515Open in IMG/M
Ga0207946_109326Not Available513Open in IMG/M
Ga0207946_109447Not Available510Open in IMG/M
Ga0207946_109520All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium509Open in IMG/M
Ga0207946_109523All Organisms → cellular organisms → Bacteria509Open in IMG/M
Ga0207946_109629All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium506Open in IMG/M
Ga0207946_109814All Organisms → cellular organisms → Bacteria502Open in IMG/M
Ga0207946_109908Not Available500Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0207946_100032Ga0207946_1000322F018255MREPGLQRHGNNEATVTSALTLTPFVIANKRRAPVAVLSPTKRTAVIECFNNNGLHKGRGYWWGTPEGKHISGVTVADLARDGIFSVFINLRHGSARLTERGQWFARTLIEPANEALVRK
Ga0207946_100114Ga0207946_1001142F019530MSDHQEQLHEELEQVRVALHQMASEARGCSTRTPSPRAPPTDRNVQVIVEIEARAATVERLFMISERQEWTFGQALEYALDALELALAKMATG
Ga0207946_100114Ga0207946_1001143F012799MKAPLLIALAAMLVAGSGLAMMNNACKSGHDNAWCAPISSVR
Ga0207946_100274Ga0207946_1002742F099801VKKNKRIGDRESYLEHHAALLPLRFTFVPFGTGHAGSDVIGSPERPVLMEYVDDEATQKRFYEALLKLPWLAPEVRNAIMRELGRSQREEDVGTEKARTWALRHEVREVEARMRANGERPPRGDIHTAAVEEVAGTADMKPEALMKRIQRLRGRVPGGRT
Ga0207946_100305Ga0207946_1003052F067016MTKARSAALSARSDGLDDINGGPECGVYTQMCGIEQVSVGSGLERRGA
Ga0207946_100347Ga0207946_1003471F050559NLGLLGDRKIVPAVDHRFALSNPALVSAPSKKLISAVRAPCGVETEGR
Ga0207946_100370Ga0207946_1003702F092820MKFEYQVKPFSAGQLPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTAELKLAAE
Ga0207946_100491Ga0207946_1004912F009926MIGSLRVGWRGATSKIGFDHVGEDGARLGDVEGSDGRVHLVETLAAAQKFGIDRADLVEHLAQFAEVGKELADFGVGCIRHVANPRALSGSTDCGKISLGAVPGSIDTVAVGPAAALVGLDQRAAQYLFDRRQAARELVATFEQGRG
Ga0207946_100570Ga0207946_1005703F055962MKQRFEKYDFDFPKAEITSEEKARRAMAEAKRLASLAPGEWRLWIDRAAERL
Ga0207946_100571Ga0207946_1005713F059232MKRKVLLASRILLSIVAFVVAGSRTEGLSLMVQQIGSVGDRQWLGLMVGSIVASSPVIAPLSDRIALSLAYRTGPVVESRADHTA
Ga0207946_100643Ga0207946_1006431F027622WSVASYLHELPMSDVDWLALWAEFAQATDNKQLEVAERIVYLDGRWDFNELSSSKLIAAARQIIRERVKGRS
Ga0207946_101066Ga0207946_1010661F035922QSASAAVADALNQAGFTCLAATDSSGAPFGGTICTHEAMSTSAFTLHEAVAVYVPSATSGVVRHIVLYLQGFRGVCGDTGTTPADVMNVFDLAEQMQADSLPDSVLVFPMSGGHDTTYYHDFATTTGPFAEFMNWIETIVGRGRWSLAGHSGAGDVIAKSLNLNPSTITKFDAIELLDAAYRIHHVASRFGSKLALWQTIAERNPSLTLTCIGNGTYSGCQILAEQAGFTTVVVTETQVIHCEIPNTYFGPWLHRAGPAADEPRISRTARY
Ga0207946_101227Ga0207946_1012271F026504VWTGEVGSLQWASRQALGAHQRALGALIAVIGSREITAGVEPAHRNGKVATLTVGLNHDVSTLLGIGRHLGSQPRANTSITIMRAPQRGHG
Ga0207946_101258Ga0207946_1012581F038357MCPGDPLGNHRQRPIAVSLVFEPVLAHEDGMGLTAPLPHQGRAGLQRSAGVERTSAFLELSRQNLQAALQGGGRAAMGTLLQLIGEPPDDQIATEAQRRADVMQSPPPTPQLLCRLADQLSDFAINLCQCQTSQPVLPAAVCTERLARVLASRSVVEWRFHRFAGSAMRYTRPRSSLA
Ga0207946_101538Ga0207946_1015382F052843YRGRDHRSCIVTALVAEANSIKQDYAEIVSADYPELKALDSLCQLSADRLSEHYKAIQTFQNRWALLRKEYAAQLDCNNSVEDALRNLSLADMSHGADVVKSIVDSLRNELTEVSLVQKDVLNLDERMNAAQKAIENIKEIRSAICR
Ga0207946_101596Ga0207946_1015961F090827MKCITRLIIALFAMWAVSGHAQTVFPISENDVDVSGTVLMCPKSNIYAPCRDTGSLPLPVEFGGALNLFLPSHRVQEANADASGTAQGNVDALATALMCPSRGSTYAPCAEVGTLPLTVEGGRARKLFAQVITPNHDGYWQRHHRYVHHRVR
Ga0207946_101608Ga0207946_1016082F004146RATEPRTASRSRYALDPTVIAAGKLPDRAPVVTSAANPHYQKRFDELHKLAAAGDWAAVRDYKVTGSNSYSKLIARYQQDLLALHAAWKASQ
Ga0207946_101616Ga0207946_1016162F056865MKVKTFTGSETAKVDKRVNDWLAQFGIRPHHTNTAIGQFTVKEEDQRTGKPVNRRVAVIAISVWYEEPAETG
Ga0207946_101651Ga0207946_1016512F027929MKMSKVFADFKRINTQCELRRTLEFMIGKTTYRVEVLYCYSNPKSPWSAQAYFESHNAWKCVSNFPWVGERSEEAAIRAALSFLEDLGARRLHRLVA
Ga0207946_101659Ga0207946_1016591F025131FMFVGTAYANERSAELVKSFQAFCASAPLDFAALDAKATAMKLAVRKDVGTPQQTGKFARSKSWLVPLDSRPHELVATEARGPDGETASCGIGAEDVDGEEVRRDLVEAMKLGAPLRQTATADGAQRVTTWKYADDTTLLLADGTPMKIPGIFLTLQRRRNASR
Ga0207946_101682Ga0207946_1016821F063010MDTTASSFTARNNAKRAAEKMIANGKAPAVNYGIRPRDDGRFEIVWKTAPTTGEVEAEIATAATAAEDGHYNTNPRFSVNEDPSDAPPNAGAEEAAAATGNEPAASSVPASGAPERDNKWPDGTRVMVRNKPKSWSEATIYTRLDAEYWRVQYLSGGTGMFKEGDIRAYDAERDAKRARQPRRAKAAGRRAASRSRYALDPAVIAAGKLPDKAPVVTSAANPHYQKRFDELHKLAAARDWAAVRDYKVSGSNSYSKLVARYQQDLLALHAASGDAQ
Ga0207946_101732Ga0207946_1017322F002561MRPSGSGTAAYIARWRPSSVSPQAAAFARDVITAVAPDGQERAKNLLWAAGKLAGWAIPLGLDAVPEVLLHPSVAERFTRCAPGLSPVARRTLRTSLRFIGRR
Ga0207946_101795Ga0207946_1017952F000083MSTLDEITKEKQRLGEALARVDAQRVKLTSQLTELEATERVLARYSKGTQTRKTLSGKTPTTATQAAAPARQSAPRRTTIAKPAGVRRSSPSLNDQVLALAIGKTQQEITAACNGARPNHVGAAIARHKRAGRIEERDGKLYATQST
Ga0207946_101853Ga0207946_1018533F092668MRKLLPLLFAIFVMFTHLDGEPVAVNPESVSSVHPTPPGYAVGTMIDVQNGYEIVKEPFAEVVKKLETGGRGEKRRED
Ga0207946_102048Ga0207946_1020481F030540RQYLRDPPVIQLICLAKAIEVSPIVPGKDSAMTSSRPDKAARSSSSVVALVECSVRVSPTLARLIRKSAEKEVSGTSAKDALLTAAGVQPGEVATLQRELQRASEESRQWREKAAREHGQLEQSKIAAAKWDNEKAVLRGDLRKVTESLKGAQDQILTFEARIAELTTSLESRNKQLACSLSLAGLGDCAAAAIKALRDRLAKGEIQFSGDTAGDVEAMIANLERPEMRTLSKMLTRRVWRLHAIRWLLRARAAS
Ga0207946_102080Ga0207946_1020802F000277MSNLLAEAINCDDPERAAKMIRDALGIESDDVVGYCFPTEWPADREQRARYIGEWLKTEARYLAS
Ga0207946_102162Ga0207946_1021621F001362MPTRSRKRSPPATRRRALELLEASIDGCTEAIMLAYGFKTELLVELVNAGLATASIEGTVAGTRRIEVTRMRITAAGRRALTKLRWP
Ga0207946_102231Ga0207946_1022312F072713MKPRLIVAILVVAGLPVCAEAQQPSAAKAKADAQKVVKMIIGDKAKSQIYCDVVKLGEQIEETDPKDKKKADELYQQVDELATKLGPEYIALMNGLQDMDPDSEDGKEIGSTLEALDKLCAK
Ga0207946_102377Ga0207946_1023772F018233MVGIVVVTRAAVLIARRASTWTVDEHLAGLSPGCVAVDLSSPAQVYCGTARAGL
Ga0207946_102389Ga0207946_1023892F018419TALAADVWERVLRSVVKTRQRSRDHQPPISDLQSYLIGAFHHRFNRVLRNEHKRQETIELVASTVDLELIEGALDTEWAGELERAITLKQITNRMDGWTRKVWQARQYGYSWKEISTWLGVSEEQARKKFEYNLEKLRQSIVRLLKRKTLRPVV
Ga0207946_102463Ga0207946_1024632F076553MTDFDYGLANHAIRITSDRSESVWLWFWPQMTAIRDRMIAAAKQDMWEARREPRGQVFCGERRGKQCDLSLDQLRAWKGLVRVRFEYKETAAAILSWAKENGIV
Ga0207946_102526Ga0207946_1025262F023444MTALLILGCAQVNDQFYSKKNFTSQSFHTDVSECKRQNPSFVAIQSYVADSQDRTTHIDDAMVRDCMKAKGYAIQVETK
Ga0207946_102531Ga0207946_1025312F029542MNRIERVVVDECVGQESPLVGQLCERLGERPVKFVFLATEHPGIPDIEILDKLLDVRSALLTQDRVLHNLAIGRGFQSFVHTPESGLTDRRLVHVSASDKHLPVASGA
Ga0207946_103094Ga0207946_1030941F023444SRRNSVLFSKRSTRLVAGALMKAKGFLLMTTLLISGCAQVNDQFYSKKNFTSESFRADASECKRQNPSFVAIQSYVADSQDRTSNIDDAMVRDCMKAKGYDIRVQTK
Ga0207946_103104Ga0207946_1031041F000098MRVYIIGNDGITLCREPPAAVNEGEIVVASNEELHAAELSGKRLLALWNALPDVERRRKVGDRGALI
Ga0207946_103413Ga0207946_1034131F001908RSSPNLSDQVLALATGKTQPEITALCKGARPNHVGAAIARHKRAGRVEERDGKLYAMQSA
Ga0207946_103560Ga0207946_1035601F021343SILEQVDLTATRLGEKETGRTPIIELDDFSLRRQNLQSCLADRRLLAQFILAEKSA
Ga0207946_103574Ga0207946_1035741F080307MVRSQQDTAALPASRPFAVGQAGYDYFADEQHYRSLADRVLAGLRQGGRIVLVTGDPPVNLSSLTAALTEATAGKHTVLAIACGGEFNEQELRRAAGPSPLILFHQAERLLDGQLAKLCSYLASGGNRPAGVLLGVPGLVPRLEKLQPSLFEDGRAIRFNFYELGRDEIDVFMRRQLCQSSAAGGFAVDEINWITDLSSGDPAQVN
Ga0207946_103590Ga0207946_1035902F038832MLKVSAMRIPLAVTIISIAMLASPLAYGQAASGKGQPSGPAAGGGDRTLLPPTQPAIAPPSDALSNLAGGGYADPNYVPPGTHSKKTTRHRVIRAPRARTSRRFEQYSVNPAFP
Ga0207946_103998Ga0207946_1039982F019638SGNVYRVERIRLDGGQIQERRIFLFQITEHGNIILDGVRVDSVQPFAIQEGSGEIRNGMVTFSNLPQHPAVRTRKARVLHSREERREFLATCEKTLGSNFSVFVDGDPASIRQLDTEAKKQTFLEHAPVRPWESRPFQGARVEQ
Ga0207946_104049Ga0207946_1040492F070623MNSKRFAIAAALGTLTIAWAGIALSAEGWLRWNAKRGYPSITFNSTGLHVTLPEGLLAEATALGKSREQVVVLFLNRYAPGVCTDMVNMQVSQTNLTVHVRLMHELEQFLPHHAFIVDDAEQDVVVNYAPKQPVNCIDPGPSS
Ga0207946_104298Ga0207946_1042981F017213MSEFEQDPSASTGRFRAFVERGDDDTSRARRSPVSPPMMIAGAVVV
Ga0207946_104393Ga0207946_1043931F020099MTVTLPDVSEFQSPASGNAPNWAGIKSQNGGAAIIRVGYGNAHRDGMFGSNRARIKSLKFGFCGLYQYLRAGQD
Ga0207946_104451Ga0207946_1044511F002656MSDDRTKADKAWEARQEAARYRIFNAATNAAEGTDEADDETYFAVLDRAGNAAEAAAAEITGYKTYADLLEALDTRRKQS
Ga0207946_104526Ga0207946_1045262F007200SRSDGTPTGPGGRAGPGAGDPWAAGSPVAMGITDDRGRAMRAGEESLGSGRAAMVIIEVVRPGMAAHTLAPCYVRTGVGWLGRRTPGGDVAWDRFFA
Ga0207946_104547Ga0207946_1045472F069781RSASGDDSFAPGPGQSTRANAVYFDPSPAPFNAFTYCASVLLTPSSSKRVVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGLSGGTETQIAVEAATIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS
Ga0207946_104579Ga0207946_1045791F003045ILPARSEDRRIEGMDMPAIRGYAAAVVVALLALGSFTSYASAQGTNRTDVIIQLRLAGDVEALSPIRSCLADKLSQMPDVKVATLPTDGVRFIVDIVAAKKANEKISASLVVAEIFPMEEFRPRMKEGENADALLASIQYYTLLRLHEVVRARSYETLCLSIAADLGDKVLSKEYTERSD
Ga0207946_104854Ga0207946_1048541F025098SRRRDKVMVATSKIILPYEPGYVANKEADKRRKETKERLQQREREFAERQQPPSIVPERLRASSVGGFVTVEVSKSAHTAQASA
Ga0207946_104861Ga0207946_1048611F000327RSIVPIDLKPLKATMPTTTPTILDQISAEKTKISERLARLDTDRAKIATQLTDLETAERVLTRVSKAPPGRKPRSASVAEVKAPTAARGRRGQPPKATTSKSAGRKPSAPSLGERVLGLATGKTRQELYTACPNDRPNHVGMAVQRHIRAGRIEERDGKLYATLPATEQAHAAA
Ga0207946_104920Ga0207946_1049201F029910MRYMGALAILASLMLLTKSATANVLSPADYENFYGLDLKMLSIGDDISGLVTNQPGTHAPDCVIELAFKFDAVQADLHGVGTLVALAAIMADNADELRVIQQLSLASRRFLEQLKYHRLILNNVMSNCAENDAIAKSLEISHTWNDAASLVQSIVKKIGAGQR
Ga0207946_104967Ga0207946_1049672F007656MSLYRCRFLDSTFNVFEIQGVACENDAEAIMMARRMSANTGAAGFELLHDERCVHMETMPSATARDHRSRA
Ga0207946_105168Ga0207946_1051681F003969GDILGRQGYREVTNIPSLEKARDVYRMLVDAFRAHFGEAKRTLGNAEYVKILSELRLNPKTKLNPDQAVRVFNRMEETLNART
Ga0207946_105220Ga0207946_1052201F028450METRDVLLKADKVSVVFERIADGKIRVTTSSWDDAKVIWPNQVLEVATIGKQVGLVRVDKPIAYLDIDDTGLVGAGYGPETN
Ga0207946_105818Ga0207946_1058181F001261MVAKQLRTVLDPHTRCVVASSCPDEGLPANEGADHRANLPFRSGGNSHPAYTEARAELRDRETYYAELRFAVHCQSRSIPAPRAALDDEESSGRTHDASAKSAQDGSARDHGGTEGESWDEMIARFDDTWT
Ga0207946_105863Ga0207946_1058632F067995MKSRISRRQFQAAIGWGAASIALSEFGLARPGVAEENFTLASTGATWGEGLRASFVDAPKFEEKTGVKVSQEFAIDSVFTAKAMASCGSPPFSTLAVLQAEANFLALGGCLQDYDLDICTNYKDIIDSAKEPPRGPLKNWFT
Ga0207946_105865Ga0207946_1058651F044087MVVEVSPEIEQLVFEICRCPEQQVIQILSANGADEPFHEWMGQGNVGYGLDFRQLQYTQIGLPLVEPIEWIVVGAQVLRHPALPSNGTVEHPTEGDTIDGSRMDAETNNPARILIHD
Ga0207946_105963Ga0207946_1059632F041892TPLPGSGPLYAARVETQDRSNVVSIIPAASALSTISLPPVRDSYDAISPP
Ga0207946_106045Ga0207946_1060451F008164MKTTKSSPGNEGGARERDRALERTLRDALALAVSKKVADQALRQARNKAHDAGRHDLRRVAGHLAGYGTLLTYIIWHQRRTQKQSAG
Ga0207946_106084Ga0207946_1060842F039840QQSSTDPLSATWTGAGQNAGPAHVGGSAGNTTTAFDGTYQGISNRSASTAGTGKKTVEANVTGCQPFDAPPTLTVTNGLAQFQAMGVTFAGYVTPQGHLTMHSGYGATLTGQAQPALVDEDLDGNFDTQTHVLHARVSTINCRYDVNWQRIT
Ga0207946_106127Ga0207946_1061271F006238MMEDCPETDIEFDALRLTIDHKHRSAECYCSQVTLDDLLSDEVMAPVLRSGGYEPDEFREMMTEMPGISSRRPRVVKAGFLY
Ga0207946_106127Ga0207946_1061272F031238ARLVAKGFFGETVDEQNDASGPISLDVNLSEDDGPSRQGRLQVRFDLDKHTCEFGKSTSAKTASTTQMIFDDRHYKFDEITEELVRETAEQFVLDLIAEKLFR
Ga0207946_106395Ga0207946_1063951F000327PELLKVTMPTTTPTTLDQINVEKTKVSERLARLDGDRAKIATQLIDLETAERVLTRFSKTPPARRPRLASAAEVKASKGTRGRGRPPRAATGKSAGREPSARSLGLGERVLALATGKTRQELYAACPSDRPNHVGMAVQRHIRAGRIQERDGKLYATSPATEQSHTLALARTLPSFERKPLIWDCRFQCSDQRCPELARSR
Ga0207946_106417Ga0207946_1064172F016711MLRAMNQPSDLPPQPAEYYRRKAARARQVAEGVTTRAIKLRLLELALEYDKLAEGTESAMRPPPDLSDI
Ga0207946_106504Ga0207946_1065041F069869MMKFTTKWALALVPGLALATPALALAPDNQADLAQPGSVIIFPKFINTPAVSVDGGILVPRTEIEVGVVCPAGTTCVEHQSVKVRFHWVCPAVENVGSNICQETDFDVNLSIDGKLAFPADGAVPGTYWVNAPRVPAPPCPRGYL
Ga0207946_106538Ga0207946_1065382F099817AVPSCAGQMNPDNQQAASSVRSSLAYGNTMRDQDMAIEADPLTLKETKTWS
Ga0207946_106590Ga0207946_1065902F025810GKVVGLPADLLIAAVLVGVAAACLRAPVSRRVLALLAIPVIPYAFLWQEKLAVDLFGQPGGGSAIISSSIPLLYLPPLLLACLILFGTWLARRRAGERDRQVGSATSGPRSPVSA
Ga0207946_106599Ga0207946_1065991F016213YILTAFSAIVYYRRRIFSNAWDAVLVGILPLASAAFLVWIVVRSWQNAPGSQRWSLFGIVMAGVALMLVARYILRSPFFRIPRESAPR
Ga0207946_106636Ga0207946_1066362F049783MGELSTSINDALLAVDLNTVELVTLQSRQKQTGRETQVVILNRLRKRIHDVAKKRNCSMNQLVNSALLVFYAKGGESKLKKSAQGRGTSVHSYDTMSEAERR
Ga0207946_106725Ga0207946_1067251F002592MNENPEASVLTAKRAAQHVRLSRANDACEHLCILTLLPSLAPLHLMLADTPWPHGFGATLASVGPLSEGFERSVASPLQPRRLRAMGRTV
Ga0207946_106889Ga0207946_1068891F038834RHIRAHFGSPDNIVAAALTIGQRRTTQGMVGGYVLKVDAHHGVKSLFPASESYFLDRAVNEPLQATCWALVHLFQLQLQSYPLTLYHIDSAALARCTALIDDRDAAATAVERMAARLLAALSRPKAAECTKGRFFDRASDKLSQLARFATNELVPVDLQAMAAALSSHG
Ga0207946_107443Ga0207946_1074432F017181MRTSEARALVTEIQDRLIDLYVQQDEARGEQDPDRARELQVEIDKATAQREEIRPWAPS
Ga0207946_107454Ga0207946_1074542F003968RSGAMRMLRSAYRYRMVPDSARAHTILALLLWSGVTVFIFGILIDLFR
Ga0207946_107484Ga0207946_1074842F092641SDAPQATGIEVVATQPTKADRATLAMFESTERKTLPGPAYIVKVRLKTLPEPTSRGFALYVGDLRIPKYWTYRQGIWFKVFDPQFFVEHKGEPIRFSLNDTEFVKTRFKLTVPKMAKTKGGRTAARLPAQEDVLK
Ga0207946_107541Ga0207946_1075411F026997MQIQMVTFSAVKDGNAPGEWQDGACGGVAADGRWGRFVVLDGATTA
Ga0207946_107568Ga0207946_1075681F004028FTTFRWWGAAATAVLLLAANCAPLPPTSSVAIPPAPGGAARIWIYRNDAPNEPNQTPYANLNGQIAGVVQPNGAFYRDVPPGFYTVAVDSYGAPYPHQFAEFNLGPGQEAFVEVLSMREKVGSSEGLRTYFFTQLVPPEIARPAIAGTPFYGGS
Ga0207946_107618Ga0207946_1076181F055945MSLNRLFSVSPAVNYVAPRYVSMMCSLLVSSGLMMLGRFPVMACSMRQMF
Ga0207946_107732Ga0207946_1077322F006519MYVSLADSRAKGFKKWADVHQPEKLGGARAGASEGGVIAAPDLAQGVTTQAGQPHRPWLVPGRGTL
Ga0207946_107911Ga0207946_1079111F000098MRIYIIGHDGITVCGEPPAAVNEGEIVVALNEELHAAELSGKRLLALWNALPSVEKRRKVSDRDALINELWSAMEML
Ga0207946_107984Ga0207946_1079842F000454MSTLDEITKEKQRISEALARVDMQREKLAGQLGELEATERVLARYSK
Ga0207946_108042Ga0207946_1080421F047236MPVEGRDLSSRRTHYVVRDLEIGQPINSEECSETA
Ga0207946_108305Ga0207946_1083051F002263MIIEGGTAIVLVYVLVSMGVIIAFLLAAFVIGWFIGRLRQRRREQSGEEY
Ga0207946_108377Ga0207946_1083771F083795LCLFAVRYGEDEEAEEPAKVQSDRIVYQIASLVCVLISTDNLSRWLERGGNSYWFWLCSGSVAMVVLFGILALVAQFFYWADIVKKLNDG
Ga0207946_108444Ga0207946_1084441F003243ELAAVLGYFFGMIMVLTATVVLLPSLSNISTIGSGRHYPHPAIARTVTVELQRHSPSSAKDVSPVVSTAKADTKQIKHYKPKVLARQRNNYGYRNALGYAEESRYGPKGPFFQ
Ga0207946_108592Ga0207946_1085922F063046VCKASIAAVLLAFGIVSLVQEGTNAMVGPSAGLRPALTMPAVKTVALRKSVTVTRHVAVRHRGVSVRARHVAVRHRGVTKTRHVAAGHRGIAVRT
Ga0207946_108721Ga0207946_1087211F002899MPDETTFELASVHFGAEPVAVFRFGYERFELRARLGPGNLEHAIAAAAEVAAGVFAKWSQEALAFAQRVRAGEDGAPVHH
Ga0207946_108766Ga0207946_1087662F063051MDQLQQLVETLRVLARTNEPNRVALVEKAIDEYLNDKAGIVRLSLDRLWNAIEREEADRRVFEDWSIAKDYIRSRL
Ga0207946_108919Ga0207946_1089191F000277NLLAQAINCDDPDRTAKIIQDALGIESDDTVNYCFPKDWPTDRERRARYIGEWLKTEAHYLA
Ga0207946_109151Ga0207946_1091511F028020MAKAVSRFAATFVTDTTNPPAPRPRWLRRGRYDLVEVADVIIALIGFAV
Ga0207946_109226Ga0207946_1092261F041900RNMLLDHLESTGATLTTRSVLEVVVRPLARQLRTPEGRRYFRIGAQLINHPRFMTDAGGAVTVNTSIARCAAYLLPSLDHLPAPVIAERTSQVTGFVIRACSDQSRLMDSDPPARPVLSVEDFTVNLVDTILAILQAPTSVASGG
Ga0207946_109261Ga0207946_1092611F098120MSAETGQSDGSAPAAQPAGPASGPAQVENWHHDLVELIDGWGWIRTLNDQLTAVLAP
Ga0207946_109326Ga0207946_1093261F008633MNEPASHGDGRPLAAHVEDETSVSPNKATKPTSVPNLPLIPSDQGSLPSLPFHIAIADGGLQIEARIKKERDLDNLIQILQTIKPLLQNIYGREPNALVDPPDPPDLGEHSQRVFDASMTPHKEAETGMSFFITKA
Ga0207946_109447Ga0207946_1094471F019377HAGFPSQCAQPVTSSTGQAALVADTYRQWVVGATAAAAYDVGVLFSNADNPGNPQVQAILKSLPNVR
Ga0207946_109520Ga0207946_1095202F095279HQGIPLGVRRAESKILIHLRQSAPVVEKRSLAAYERAANGGGR
Ga0207946_109523Ga0207946_1095231F069391MTASATAPTREKAERARENSEYVRSLLNVRQPQFAAALEVAARKPLRDHRTVCA
Ga0207946_109629Ga0207946_1096291F047294MTATPNFASSAGAEAGGQAVPALSAGPFVLNLCSSTTPMALAQTDLPELRR
Ga0207946_109814Ga0207946_1098141F013363VGFGAEILFILLLGLLVLGPKRLHIVLADVARAKARFEEAS
Ga0207946_109908Ga0207946_1099081F037440MPRFYFHLKSKEACIPDDSGKDFDTLNDAYKHGLKLIDKILLHVGYDDANEWKVIVLNDQDDVELVIPFTASYQSSSTRKPNTADQTAV

 ⦗Top⦘



© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.