Metagenome / Metatranscriptome Family F047294

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047294
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	60 residues
Representative Sequence	MTATPNFASGAGAEAGGPAAPALSTGPFVLNLCSSTTPMALAQTDLPELRRFTFFVSR
Number of Associated Samples	130
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.60 %
% of genes near scaffold ends (potentially truncated)	94.00 %
% of genes from short scaffolds (< 2000 bps)	84.00 %
Associated GOLD sequencing projects	124
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.667 % of family members)
Environment Ontology (ENVO)	Unclassified (29.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.14% β-sheet: 6.98% Coil/Unstructured: 84.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF00877	NLPC_P60	55.33
PF13424	TPR_12	3.33
PF01494	FAD_binding_3	2.67
PF13460	NAD_binding_10	2.00
PF02080	TrkA_C	0.67
PF08378	NERD	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	55.33
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	5.33
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	2.67
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	2.67
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	2.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.67 %
Unclassified	root	N/A	5.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.67 %
Unclassified	root	N/A	5.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.67 %
Unclassified	root	N/A	5.33 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	91.33 %
Unclassified	root	N/A	5.33 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	79.33 %
Unclassified	root	N/A	5.33 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	77.33 %
Unclassified	root	N/A	5.33 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	77.33 %
Unclassified	root	N/A	5.33 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002911\|JGI25390J43892_10152887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	538	Open in IMG/M
3300004092\|Ga0062389_102710983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	661	Open in IMG/M
3300005175\|Ga0066673_10138527	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300005184\|Ga0066671_11043157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	513	Open in IMG/M
3300005187\|Ga0066675_10361842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1063	Open in IMG/M
3300005187\|Ga0066675_11226788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	555	Open in IMG/M
3300005293\|Ga0065715_10851529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	591	Open in IMG/M
3300005363\|Ga0008090_10114992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	707	Open in IMG/M
3300005451\|Ga0066681_10629581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	658	Open in IMG/M
3300005526\|Ga0073909_10013979	All Organisms → cellular organisms → Bacteria → Proteobacteria	2498	Open in IMG/M
3300005541\|Ga0070733_10571261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	758	Open in IMG/M
3300005559\|Ga0066700_11040285	Not Available	537	Open in IMG/M
3300005566\|Ga0066693_10209972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	760	Open in IMG/M
3300005568\|Ga0066703_10081679	All Organisms → cellular organisms → Bacteria → Proteobacteria	1870	Open in IMG/M
3300005575\|Ga0066702_10567440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	684	Open in IMG/M
3300005586\|Ga0066691_10170316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1259	Open in IMG/M
3300005616\|Ga0068852_100509723	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300005617\|Ga0068859_101719378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	693	Open in IMG/M
3300005764\|Ga0066903_100256431	All Organisms → cellular organisms → Bacteria → Proteobacteria	2707	Open in IMG/M
3300005764\|Ga0066903_100977167	All Organisms → cellular organisms → Bacteria → Proteobacteria	1544	Open in IMG/M
3300005764\|Ga0066903_102612972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	979	Open in IMG/M
3300006032\|Ga0066696_11052497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	517	Open in IMG/M
3300006172\|Ga0075018_10194464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	959	Open in IMG/M
3300006174\|Ga0075014_100196202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1015	Open in IMG/M
3300006358\|Ga0068871_101670297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	604	Open in IMG/M
3300006800\|Ga0066660_11037900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	655	Open in IMG/M
3300006953\|Ga0074063_14110276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	743	Open in IMG/M
3300007255\|Ga0099791_10405897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	656	Open in IMG/M
3300007258\|Ga0099793_10413015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	664	Open in IMG/M
3300009137\|Ga0066709_100013294	All Organisms → cellular organisms → Bacteria → Proteobacteria	7750	Open in IMG/M
3300009137\|Ga0066709_104670508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	501	Open in IMG/M
3300009143\|Ga0099792_10705874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	653	Open in IMG/M
3300009525\|Ga0116220_10322916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	682	Open in IMG/M
3300010116\|Ga0127466_1039451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	555	Open in IMG/M
3300010303\|Ga0134082_10167898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	891	Open in IMG/M
3300010321\|Ga0134067_10227050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	696	Open in IMG/M
3300010358\|Ga0126370_11635788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	617	Open in IMG/M
3300010359\|Ga0126376_11432597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	717	Open in IMG/M
3300010398\|Ga0126383_13245860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	531	Open in IMG/M
3300010398\|Ga0126383_13641380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	503	Open in IMG/M
3300010399\|Ga0134127_10251826	All Organisms → cellular organisms → Bacteria → Proteobacteria	1674	Open in IMG/M
3300012205\|Ga0137362_10610859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	940	Open in IMG/M
3300012205\|Ga0137362_11067565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	687	Open in IMG/M
3300012361\|Ga0137360_10709275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	864	Open in IMG/M
3300012361\|Ga0137360_11144266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	673	Open in IMG/M
3300012404\|Ga0134024_1121988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	532	Open in IMG/M
3300012582\|Ga0137358_10070463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2347	Open in IMG/M
3300012917\|Ga0137395_10692586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	737	Open in IMG/M
3300012917\|Ga0137395_10740385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	711	Open in IMG/M
3300012925\|Ga0137419_11656633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	545	Open in IMG/M
3300012929\|Ga0137404_10591245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	997	Open in IMG/M
3300012948\|Ga0126375_11578209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	564	Open in IMG/M
3300012971\|Ga0126369_11294417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	819	Open in IMG/M
3300012975\|Ga0134110_10050607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1638	Open in IMG/M
3300012977\|Ga0134087_10513250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	605	Open in IMG/M
3300014325\|Ga0163163_12097827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	625	Open in IMG/M
3300014654\|Ga0181525_10316758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	852	Open in IMG/M
3300015241\|Ga0137418_11176189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	541	Open in IMG/M
3300015356\|Ga0134073_10059140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1048	Open in IMG/M
3300015357\|Ga0134072_10280342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	613	Open in IMG/M
3300016445\|Ga0182038_10888810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	785	Open in IMG/M
3300017959\|Ga0187779_10295508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1035	Open in IMG/M
3300017973\|Ga0187780_10773083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	694	Open in IMG/M
3300017994\|Ga0187822_10148288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	752	Open in IMG/M
3300018038\|Ga0187855_10614095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	633	Open in IMG/M
3300018062\|Ga0187784_10773674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	767	Open in IMG/M
3300018482\|Ga0066669_10860650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	808	Open in IMG/M
3300020582\|Ga0210395_10004071	All Organisms → cellular organisms → Bacteria → Proteobacteria	11231	Open in IMG/M
3300021362\|Ga0213882_10111528	All Organisms → cellular organisms → Bacteria → Proteobacteria	1111	Open in IMG/M
3300021377\|Ga0213874_10250624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	652	Open in IMG/M
3300021377\|Ga0213874_10315639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	591	Open in IMG/M
3300021420\|Ga0210394_11074326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	695	Open in IMG/M
3300021439\|Ga0213879_10000976	All Organisms → cellular organisms → Bacteria → Proteobacteria	4279	Open in IMG/M
3300021559\|Ga0210409_10453862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1143	Open in IMG/M
3300021560\|Ga0126371_11760655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	742	Open in IMG/M
3300022726\|Ga0242654_10257191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	628	Open in IMG/M
3300025920\|Ga0207649_11192085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	602	Open in IMG/M
3300025929\|Ga0207664_11419975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	615	Open in IMG/M
3300025986\|Ga0207658_10978666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	771	Open in IMG/M
3300026142\|Ga0207698_10392062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1324	Open in IMG/M
3300026305\|Ga0209688_1062334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	677	Open in IMG/M
3300026312\|Ga0209153_1221938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	631	Open in IMG/M
3300026330\|Ga0209473_1087994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1304	Open in IMG/M
3300026335\|Ga0209804_1247407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	673	Open in IMG/M
3300026342\|Ga0209057_1026419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3145	Open in IMG/M
3300026342\|Ga0209057_1084057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1337	Open in IMG/M
3300026538\|Ga0209056_10431015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	776	Open in IMG/M
3300026548\|Ga0209161_10015554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5594	Open in IMG/M
3300027108\|Ga0207946_109629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	506	Open in IMG/M
3300027297\|Ga0208241_1076048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	538	Open in IMG/M
3300027635\|Ga0209625_1142875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	535	Open in IMG/M
3300027671\|Ga0209588_1262811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	525	Open in IMG/M
3300027874\|Ga0209465_10193061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1016	Open in IMG/M
3300027986\|Ga0209168_10418276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	651	Open in IMG/M
3300028536\|Ga0137415_10012208	All Organisms → cellular organisms → Bacteria → Proteobacteria	8511	Open in IMG/M
3300031128\|Ga0170823_14000149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	800	Open in IMG/M
3300031231\|Ga0170824_126768246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	724	Open in IMG/M
3300031544\|Ga0318534_10432669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	754	Open in IMG/M
3300031640\|Ga0318555_10010313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4082	Open in IMG/M
3300031640\|Ga0318555_10151567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1241	Open in IMG/M
3300031640\|Ga0318555_10329061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	827	Open in IMG/M
3300031681\|Ga0318572_10519624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	709	Open in IMG/M
3300031720\|Ga0307469_10856251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	838	Open in IMG/M
3300031723\|Ga0318493_10057482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1860	Open in IMG/M
3300031740\|Ga0307468_100176772	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300031747\|Ga0318502_10170434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1249	Open in IMG/M
3300031753\|Ga0307477_11147813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	506	Open in IMG/M
3300031763\|Ga0318537_10128131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	944	Open in IMG/M
3300031765\|Ga0318554_10191228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1164	Open in IMG/M
3300031771\|Ga0318546_11234281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	525	Open in IMG/M
3300031779\|Ga0318566_10301024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	793	Open in IMG/M
3300031781\|Ga0318547_10150405	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300031782\|Ga0318552_10732734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	504	Open in IMG/M
3300031798\|Ga0318523_10009619	All Organisms → cellular organisms → Bacteria → Proteobacteria	3879	Open in IMG/M
3300031799\|Ga0318565_10508797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	581	Open in IMG/M
3300031821\|Ga0318567_10348239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	837	Open in IMG/M
3300031821\|Ga0318567_10606780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	621	Open in IMG/M
3300031831\|Ga0318564_10266925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	758	Open in IMG/M
3300031835\|Ga0318517_10117394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1176	Open in IMG/M
3300031846\|Ga0318512_10019632	All Organisms → cellular organisms → Bacteria → Proteobacteria	2769	Open in IMG/M
3300031846\|Ga0318512_10484041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	626	Open in IMG/M
3300031879\|Ga0306919_10361008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1110	Open in IMG/M
3300031879\|Ga0306919_10825047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	712	Open in IMG/M
3300031890\|Ga0306925_10629942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1130	Open in IMG/M
3300031896\|Ga0318551_10112682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1458	Open in IMG/M
3300031910\|Ga0306923_11223489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	801	Open in IMG/M
3300031910\|Ga0306923_11342538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	756	Open in IMG/M
3300031945\|Ga0310913_10040468	All Organisms → cellular organisms → Bacteria → Proteobacteria	3007	Open in IMG/M
3300031946\|Ga0310910_10028479	All Organisms → cellular organisms → Bacteria → Proteobacteria	3769	Open in IMG/M
3300031947\|Ga0310909_10064210	All Organisms → cellular organisms → Bacteria → Proteobacteria	2863	Open in IMG/M
3300031959\|Ga0318530_10119680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1057	Open in IMG/M
3300032001\|Ga0306922_10997606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	864	Open in IMG/M
3300032039\|Ga0318559_10437930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	610	Open in IMG/M
3300032043\|Ga0318556_10221050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	987	Open in IMG/M
3300032052\|Ga0318506_10549992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	511	Open in IMG/M
3300032076\|Ga0306924_10066468	All Organisms → cellular organisms → Bacteria → Proteobacteria	4015	Open in IMG/M
3300032205\|Ga0307472_102390875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	536	Open in IMG/M
3300032828\|Ga0335080_11052453	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300033289\|Ga0310914_11048158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	716	Open in IMG/M
3300033289\|Ga0310914_11557295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	564	Open in IMG/M
3300033290\|Ga0318519_10042578	All Organisms → cellular organisms → Bacteria → Proteobacteria	2225	Open in IMG/M
3300033290\|Ga0318519_10140993	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300033290\|Ga0318519_10416425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	802	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.33%
Host-Associated	Host-Associated	6.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.67%
Plants	Host-Associated → Plants	6.67%
Aquatic	Environmental → Aquatic	4.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.33%
Freshwater	Environmental → Aquatic → Freshwater	3.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.67%
Roots	Host-Associated → Plants → Roots	2.67%
Sediment	Environmental → Aquatic → Sediment	1.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.33%
Cave	Environmental → Terrestrial → Cave	0.67%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.67%
Loam	Environmental → Terrestrial → Soil → Loam	6.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.33%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.33%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.33%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.67%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.00%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.33%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.33%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.33%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.67%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.67%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.67%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.67%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.00%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.00%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.33%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.33%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.67%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.67%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.67%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.67%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.67%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300010116	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027108	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF030 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25390J43892_101528871	3300002911	Grasslands Soil	MIATSNFSSVRAGAEARHTEAXAASAAPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRERFRLHMGY
Ga0062389_1027109831	3300004092	Bog Forest Soil	MTATPNFASDAARVGAGDAAVSAGNAGPFVLNLCSSTTPMALAQTDLPELKRF
Ga0066673_101385273	3300005175	Soil	MTATANFSSARTGAEARHTEAPAANAAPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRER
Ga0066671_110431571	3300005184	Soil	MTATANSSSARTGAEARHTEAPAANAAPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRER
Ga0066675_103618422	3300005187	Soil	MTATANSSSARTGAEARHTEAPAANAAPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRERFRLHMGYF
Ga0066675_112267881	3300005187	Soil	MIATSNFSSVRAGAEARHTEAPAASAAPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRER
Ga0065715_108515291	3300005293	Miscanthus Rhizosphere	MTATPNFASEALTGAGAGDAAPAPNAGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRE
Ga0008090_101149922	3300005363	Tropical Rainforest Soil	MTATPDFAADAGAEAGRPVAPALSTGPFVLNLCSSTTPMALAQIDIPELRRFTFFVS
Ga0066681_106295812	3300005451	Soil	MIATPNVSSVRASAEARHTEGPAANAGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRER
Ga0073909_100139791	3300005526	Surface Soil	MTATPNFASEALTGAGAGDAAPAPNAGPFVLNLCSSTTPMALAQTDLPELK
Ga0070733_105712612	3300005541	Surface Soil	MTPTANLASDEDADQSAAPAAEAGPFVLNLCSSTTPMALAQTDMPELKRFTFFVSRRFE
Ga0066700_110402851	3300005559	Soil	MIATSNFSSVRAGAEARHTEAAAASAAPFVLNLCSSTTPMALAQTDLPE
Ga0066693_102099721	3300005566	Soil	MIATSNFSSVRAGAEARHTEAPAASAAPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRR
Ga0066703_100816791	3300005568	Soil	MTAMTTFASSRTDAGALNAATPAAGAVPFVLNLCSSTTPMALAQTDLPELKRFTFVVSRRFEEGRERFRLHMGYFSTLAEAE
Ga0066702_105674402	3300005575	Soil	MTAMTTFASSRTDAGALNAATPAAGTVPFVLNLCSSTTPMALAQTDLPELKRFTFVVSRRFEEGRERFRLHMGYFSTLAEAE
Ga0066691_101703161	3300005586	Soil	MTATANFSSARTGAEARHSEAPVASAGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFE
Ga0068852_1005097231	3300005616	Corn Rhizosphere	MTATPNFASEALTGAGAGDAAPAPNAGPFVLNLCSSTTPMALAQTDL
Ga0068859_1017193782	3300005617	Switchgrass Rhizosphere	MTATPNFASEALTGAGAGDAAPAPNAGPFVLNLCSSTTPMALAQTDLPELKRFTFFV
Ga0066903_1002564311	3300005764	Tropical Forest Soil	MTATANFASGAGAEAGGHAVPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFFVSRRFEEGRERF
Ga0066903_1009771673	3300005764	Tropical Forest Soil	VFWFGEAMTATPNFASGAGGEAGALAPPALSTGQFVLNLCSSTTPMALAQTDLPELK
Ga0066903_1026129721	3300005764	Tropical Forest Soil	VFWFGEAMTATPNFAADAGAEAGRPVAPALSTGPFVLNLCSSTTPMALAQTD
Ga0066696_110524971	3300006032	Soil	MIATSNFSSVRAGAEARHTEAAAASAAPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRER
Ga0075018_101944642	3300006172	Watersheds	MTATPNFAADALAELGADATAPVASSGPFVLNLCSSTTPMALAQTDLPE
Ga0075014_1001962022	3300006174	Watersheds	MRTPSYASGAHAAAEAGGATAPAPGAGSFVLHLCSSTTPMALPQADLPELKRFSFFISRRFEEGRERFR
Ga0068871_1016702972	3300006358	Miscanthus Rhizosphere	MTATPNFASGARTEDRGQAAPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFFVSRRFEEGRERF
Ga0066660_110379002	3300006800	Soil	MTAMTTFASSRTDAGALNAATPAAGAVPFVLNLCSSTTPMALAQTDLPELKRFTFVVSRRFEEG
Ga0074063_141102761	3300006953	Soil	MTATPNFASDARSLGAADAAAPAGNAGPFVLNLCSSTTPMALAQTDLPELKRFNFFVSRRFEEGRERF
Ga0099791_104058971	3300007255	Vadose Zone Soil	MTATANFASVRTSAGARDTAALASSAAPFVLNLCSSTTPMALAQTDLPELKRFTF
Ga0099793_104130152	3300007258	Vadose Zone Soil	MFMTAMANFSSARAGAEARHTEAPVASAGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFE
Ga0066709_1000132949	3300009137	Grasslands Soil	MTATPNFASVRGSADVRHMAAAVTSAGPFVLNLCSSTTPMALAQTDL
Ga0066709_1046705081	3300009137	Grasslands Soil	MIATSNFSSVRAGAEARHTEAPAASAAPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFE
Ga0099792_107058742	3300009143	Vadose Zone Soil	MTAIANFASVRTSTEARDMAAPATSAGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEE
Ga0116220_103229161	3300009525	Peatlands Soil	MTATPNFASDAARVGAGDAAVSAGNAGPFVLNLCSSTTPMALAQTDLPE
Ga0127466_10394511	3300010116	Grasslands Soil	MTTFASSRTDAGALNAATPAAGAVPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRERFRL
Ga0134082_101678982	3300010303	Grasslands Soil	MTTFASSRTDAGALNAATPAAGAVPFVLNLCSSTTPMALAQTDLPELKRFTFVVSRRFEEGRERFRLHMGYF
Ga0134067_102270501	3300010321	Grasslands Soil	MIATPNVSSVRASAEARHTEGPAANAGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRERFRLHMGYF
Ga0126370_116357881	3300010358	Tropical Forest Soil	MTATPSFASDAGTEVGVTAAPALSARPFVLNLCSSTTPMALAQTDLPELRRFTFFVSRRFEEGRERFRLHMGY
Ga0126376_114325972	3300010359	Tropical Forest Soil	MTATPNFASGASTEDRGQTAPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFFVS
Ga0126378_119689561	3300010361	Tropical Forest Soil	MTPRSNFAGAAAEAGEAAPASPYVLNLCSSTTPMALAQTELPELRRFTFF
Ga0126383_132458601	3300010398	Tropical Forest Soil	MTATANFASGAGAEAGGHAVPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFFVSRRFEE
Ga0126383_136413801	3300010398	Tropical Forest Soil	MTATPNFASGAGAEAGGLAPPALSTGAFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRE
Ga0134127_102518261	3300010399	Terrestrial Soil	MTSTAHLASAPADADHAAAPAAEAGPFVLNLCSSTTPMALAQTDLPELKRFTFF
Ga0137362_106108591	3300012205	Vadose Zone Soil	MTATANFASVRTSAGARDTAALASSAAPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRR
Ga0137362_110675652	3300012205	Vadose Zone Soil	MTATANFASVRTGTEARDMAAPATSAGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRR
Ga0137360_107092752	3300012361	Vadose Zone Soil	MTAIANFASVRTSTEARDMAAPASSAGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRR
Ga0137360_111442662	3300012361	Vadose Zone Soil	MTAMTTFASHRTDAGALNAATSAAGAVPFVLNLCSSTTPMALAQTDLPELKRFTFVVSRRFEEGRERFRL
Ga0134024_11219882	3300012404	Grasslands Soil	MIATSNFSSVRAGAEARHTEAPAASAAPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRP
Ga0137358_100704631	3300012582	Vadose Zone Soil	MTATANFASVRTSAAARDTAAPASSAAPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRERFRLHMGY
Ga0137395_106925862	3300012917	Vadose Zone Soil	MTATATFFSARTGAEARHTEAPAANVGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRER
Ga0137395_107403851	3300012917	Vadose Zone Soil	MTATANFSSARTGAEARHSEAPVASAGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSR
Ga0137419_116566331	3300012925	Vadose Zone Soil	MTATSNFASMRTSVEAGYTAAAATSAGPFVLNLCSSTTPMALAQTDLP
Ga0137404_105912451	3300012929	Vadose Zone Soil	MTATANFASVRTSAAARDTAAPASSAAPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRR
Ga0126375_115782091	3300012948	Tropical Forest Soil	MTATPNFASGAGGEAGALAAPALSTGQFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRERFRLHMGY
Ga0126369_112944171	3300012971	Tropical Forest Soil	MTATPNFASGAGGEAGTLAPPALSTGQFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRERFRL
Ga0134110_100506071	3300012975	Grasslands Soil	MTTFASSRTDAGALNAATPAAGTVPFVLNLCSSTTPMALAQTDLPELKRFTFVVSRRFEEGRERFRLHMGYF
Ga0134087_105132501	3300012977	Grasslands Soil	MIATPNVSSVRASAEARHTEGPAANAGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRERFRLHMGY
Ga0163163_120978272	3300014325	Switchgrass Rhizosphere	MTPTSNLASGAAARAEAGNEATPATDTGPFVLNLCSSMTPLALAQTDLPELKRFTFFV
Ga0181525_103167581	3300014654	Bog	MTATPNFATDAAVGAGDAAALTAGVGPFVLNLCSSTTPMALAQTD
Ga0137418_111761891	3300015241	Vadose Zone Soil	MTPTANFASVRASVVVGNMAAAATSAGPFVLNLCSSTTPMALAQTDLPELK
Ga0134073_100591401	3300015356	Grasslands Soil	MIATPNVSSVRASAEARHTEGPAANAGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRERFR
Ga0134072_102803421	3300015357	Grasslands Soil	MIATSNFSSVRAGAEARHTEAPAASAAPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRERF
Ga0182040_118509571	3300016387	Soil	MTAIPNVAADARAGAVAGDPAAPAASGGPFVLNLCSSTTPMALAQTELPEL
Ga0182038_108888101	3300016445	Soil	MTATANFASGASAEAGGHAAPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFFVSRRFEEGR
Ga0187825_100108901	3300017930	Freshwater Sediment	MTASAHFASDARERAEAGDPAAPASSPGPYVLNLCSSTTPMALAQTELPELKRFTFF
Ga0187779_102955081	3300017959	Tropical Peatland	MTASPNLASRAQAGTEAADAAAPAASTSPFVLNLCSSTTPMALAQTDLPELKRFT
Ga0187780_107730832	3300017973	Tropical Peatland	MTASPNLASRAQAGTEAADAAAPAASTSPFVLNLCSSTTPMALAQTDLPELKRFTFF
Ga0187822_101482881	3300017994	Freshwater Sediment	MTATPNFASGARTEDRGQAAPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFFVSRRFEE
Ga0187855_106140951	3300018038	Peatland	MTATPNFATDAAVGAAEAAVPTANVGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRERF
Ga0187784_107736742	3300018062	Tropical Peatland	MVGEGMTATPNFASDALTGAEAVGATAPAAGAGPFVLHLCSSTTPLALAQTDLPELK
Ga0066669_108606501	3300018482	Grasslands Soil	MIATPNVSSVRASAEARHTEGPAANAGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFE
Ga0210395_1000407111	3300020582	Soil	MTATANFSSARSGAEARQTEAPAANVGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEG
Ga0210404_106456601	3300021088	Soil	MTATANFASVRTSAEARDAAAPASAGPFVLNLCSSTTPMALVQTDLP
Ga0213882_101115282	3300021362	Exposed Rock	MTTMTNKAFSARAASEGGDVTSTRSSTGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRERFRL
Ga0213874_102506241	3300021377	Plant Roots	MTATYKIATAAGAADAAPGQSPSPYVLNLCSSTTPMALAQNDLPELKRFQFFVSRRFEE
Ga0213874_103156392	3300021377	Plant Roots	MVSVAGEVMTATYKIASDARAGAGAGDAAPGHSAAPYVLNLCSSTTPMALAQTDLAELKRFNF
Ga0210394_110743261	3300021420	Soil	MTATPNFASSAGAEAGGQAVPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFFVSRRFEEGRERFRLH
Ga0213879_100009761	3300021439	Bulk Soil	MTATPNFASAAGTEAGGQAAPALSAGPFVLNLCSSTSPMALAQTDLPELRRFHFFVSRRF
Ga0187846_104737461	3300021476	Biofilm	MTPKSNFASAGVAAEAGDPAAPASPYVLHLCSSTTPMALAQTELPELKRFTFFVSR
Ga0210409_104538621	3300021559	Soil	MTATANFASVRTGAEARDTAAPATSAAPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRR
Ga0126371_117606552	3300021560	Tropical Forest Soil	MTATANFASGAGAEAGGHAVPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFFV
Ga0242654_102571911	3300022726	Soil	MTSQPELAADDTSGATTGESAPAATAGPFVLNLCSSSTPMALAQTDLPELKRFNFFVSRRFEEGRERFLSSDELARLGDALEE
Ga0208077_10280471	3300025427	Arctic Peat Soil	MTATPSFASDARAEFGAGDAAAPAASSNPFVLNLCSSTTP
Ga0207649_111920851	3300025920	Corn Rhizosphere	MTATPNFASEALTGAGAGDAAPAPNAGPFVLNLCSSTTPMALAQTDLPEL
Ga0207664_114199751	3300025929	Agricultural Soil	MTATANFASGAGAEARGHAVPAVNAGPFVLNLCSSTTPMALAQTDLPELRRFHFFVSRRFEEGRER
Ga0207658_109786661	3300025986	Switchgrass Rhizosphere	MTATPNFASEALTGAGAGDAAPAPNAGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRERFRLH
Ga0207698_103920621	3300026142	Corn Rhizosphere	MTATPNFASEALTGAGAGDAAPAPNAGPFVLNLCSSTTPMALAQTDLPELKRFTFF
Ga0209688_10623341	3300026305	Soil	MTAMTTFASSRTDAGALNAATPAAGAVPFVLNLCSSTTPMALAQTDLPELKRFTFVVSRRFE
Ga0209153_12219381	3300026312	Soil	MTATANSSSARTGAEARHTEAPAANAAPFVLNLCSSTTPMALAQTDLP
Ga0209473_10879942	3300026330	Soil	MTAMTTFASSRTDAGALNAATPAAGAVPFVLNLCSSTTPMALAQTDLPELKRFTFVVSRRFEEGRER
Ga0209804_12474071	3300026335	Soil	MTAMTTFASSRTDAGALNAATPAPGAVPFVLNLCSSTTPMALAQTDLPELKRFTFVVSRRFEEGR
Ga0209057_10264191	3300026342	Soil	MTAMTTFASSRTDAGALNAATPAAGAVPFVLNLCSSTTPMALAQTDLPELKRFTFVVSRRFEEGRERFRLHMGYFATLAEA
Ga0209057_10840573	3300026342	Soil	MIATSNFSSVRAGAEARHTEAPAASAAPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRERFRLHMGYFATLAE
Ga0209056_104310152	3300026538	Soil	MTAMTTFASSRTDAGALNAATPAARTVPFVLNLCSSTTPMALAQTDLPELKRFT
Ga0209161_100155546	3300026548	Soil	MTAMTTFASSRTDAGALNAATPAAGTVPFVLNLCSSTTPMALAQTDLPELKRFTFVVSRRFEEGRERFRLHMGYFSTLAEG
Ga0207946_1096291	3300027108	Forest Soil	MTATPNFASSAGAEAGGQAVPALSAGPFVLNLCSSTTPMALAQTDLPELRR
Ga0208241_10760482	3300027297	Forest Soil	MTATPNFASDAARVGAGDAAVSASNAGPFVLNLCSSTTPMALAQTDLPEL
Ga0209625_11428751	3300027635	Forest Soil	MTAIPNIVPEVYESAEAASPAAAAPNPGPFVLNLCSSTTPMALAQTDLPELK
Ga0209588_12628111	3300027671	Vadose Zone Soil	MTATANFASVRTSAGARDTAALASSAAPFVLNLCSSTTPMALAQTDLPELKRFTFFVSR
Ga0209465_101930612	3300027874	Tropical Forest Soil	MTATANFASGAGAEAGGHAVPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFFVSRR
Ga0209168_104182762	3300027986	Surface Soil	MTAMTNMASGARAAAEGGDVGSKPASTGPFVLNLCSSTTPMALAQTDLPDL
Ga0137415_1001220810	3300028536	Vadose Zone Soil	MTATATFFSARTGAEARHTEAAAANVGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRR
Ga0170823_140001492	3300031128	Forest Soil	MTATPNFASDANSLGAADAAAPAGNAGPFVLNLCSSTTPMALAQTDLPELKRFNFFVSRRFEEGRERFRLHMG
Ga0170824_1267682462	3300031231	Forest Soil	MTATPNFASDANSLGAADAAAPAGNAGPFVLNLCSSTTPMALAQTDL
Ga0318534_104326691	3300031544	Soil	VFWFGEAMTATPNFAADGGAEAGRPAAPALSTGPFVLNLCSSTTPMALAQTDIPELRRF
Ga0318555_100103131	3300031640	Soil	VFWFGEAMTATPNFAADAGAEAGRPAAPALSTGPFVLNLCSSTTPMALAQTDIPELRRFT
Ga0318555_101515671	3300031640	Soil	MTATPNFASGAGAEAGRAAAPALSTGPFVLNLCSSTTPMALAQTDLPELRRFTFFVSRRFEEGRERFRLHMGY
Ga0318555_103290611	3300031640	Soil	VFWFGEAMTATPNFAADGGAEAGRPAAPALSTGPFVLNLCSSTTPMALAQTDIPELRRFT
Ga0318572_102952252	3300031681	Soil	MTATANFASGAGAEAGGHAVPALSAGPFVLNLCSSTTPMALAQTDLP
Ga0318572_105196241	3300031681	Soil	VFWFGEAMTATPNFAADGGAEAGRPAAPALSTGPFVLNLCSSTTPMALAQTDIPELR
Ga0307469_108562512	3300031720	Hardwood Forest Soil	MTATPNFASDAHSLGAADAAAPAGNAGPFVLNLCSSTTPMALAQTDLPELKRFNFFVSRRFE
Ga0318493_100574824	3300031723	Soil	MTATPNFASGAVAEAAQQAVPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFFVSRRFEEGRERFRLHMGY
Ga0307468_1001767721	3300031740	Hardwood Forest Soil	MTATANFASGAGAEAGGHAAPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFFVSRRFEEGRE
Ga0318502_101704343	3300031747	Soil	MTATPNFAADAGAEAGRPAAPALSTGPFVLNLCSSTTPMALAQTDI
Ga0307477_111478131	3300031753	Hardwood Forest Soil	MTATPNLASNAAAEAGAAPATSGAPFVLNLCSSSTPMALAQTDLPELRRFTFFVSRRFEEGRERFRLHMGYFATLA
Ga0318537_101281312	3300031763	Soil	MTATPNFAADAGAEAGRPAAPALSTGPFVLNLCSSTTPMALAQTDIP
Ga0318554_101912281	3300031765	Soil	VFWFGEAMTATPNFAADAGAEAGRPAAPALSTGPFVLNLCSSTTPMALAQT
Ga0318546_112342811	3300031771	Soil	MTATPNFASGTSAEAGGSAAPALSAGPFVLNLCSSTSPMALAQTDLPELRRFTFFVSRRFEEGRERFRLHMGYFA
Ga0318566_103010241	3300031779	Soil	VFWFGEAMTATPNFAADGGAEAGRPAAPALSTGPFVLNLCSSTTPMALAQTDIPE
Ga0318547_101504051	3300031781	Soil	VFWFGEAMTATPNFAADAGAEAGRPAAPALSTGPFVLNLCSSTTPMALAQTDIPELR
Ga0318552_107327342	3300031782	Soil	MTATANFASGAGAEAGGHAVPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFFVSRRFEEGRERFRLHMGY
Ga0318523_100096195	3300031798	Soil	MTATPNFASGAGAEAGRAAAPALSTGPFVLNLCSSTTPMALAQTDLPELRR
Ga0318565_105087972	3300031799	Soil	MTAIPNVAADARAGAVAGDPAAPAASGGPFVLNLCSSTTPMALAQTELPELKRFTFFVSRRFE
Ga0318567_103482391	3300031821	Soil	MTATANFASGAGAEAGGHAVPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHF
Ga0318567_106067802	3300031821	Soil	MTATPNFAADAGAEAGRPAAPALSTGPFVLNLCSSTTPMALAQTDIPELR
Ga0318564_102669252	3300031831	Soil	MTATPNFASGAGAEAGGPAAPALSTGPFVLNLCSSTTPMALAQTDLPELRRFTFFVSR
Ga0318517_101173941	3300031835	Soil	MTATPNFASGAGAEAGRAAAPALSTGPFVLNLCSSTTPMALAQTDLPELRRFTFF
Ga0318512_100196324	3300031846	Soil	MTATPNFAADAGAEAGRPAAPALSTGPFVLNLCSSTTPMALAQTD
Ga0318512_104840411	3300031846	Soil	VFWFGEAMTATPNFAADGGAEAGRPAAPALSTGPFVLNLCSSTTPMALAQTDIP
Ga0306919_103610083	3300031879	Soil	MTATPNFASGAGAEAGRAAAPALSTGPFVLNLCSSTTPMALAQTDLPELRRFH
Ga0306919_108250471	3300031879	Soil	MTATANFASGAGAEAGGHAVPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFFVSRRFEEGR
Ga0306925_106299421	3300031890	Soil	VFWSGEVMTATPNFASGAGAEAGSPAAPALSAGPFVLNLCSSTTPMALAQTDLPEL
Ga0318551_101126823	3300031896	Soil	MTATPNFAADAGAEAGRPAAPALSTGPFVLNLCSSTTPMALAQTDIPAL
Ga0306923_112234892	3300031910	Soil	MTATPNFAADGGAEAGRPAAPALSTGPFVLNLCSSTTPMALAQTDIPELRRFT
Ga0306923_113425382	3300031910	Soil	MTATPNFASGAGAEAGSPAAPALSAGPFVLNLCSSTTPMALAQTDLPELKRFTFF
Ga0310913_100404684	3300031945	Soil	MTATPNFAADAGAEAGRPAAPALSTGPFVLNLCSSTTPMALAQT
Ga0310910_100284795	3300031946	Soil	MTATPNFASGAVAEAAQQAVPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFFVSRRFEEGR
Ga0310909_100642104	3300031947	Soil	MTATPNFAADAGAEAGRPAAPALSTGPFVLNLCSSTTPMALAQTDIPELRRFT
Ga0318530_101196801	3300031959	Soil	MTATPNFASGAGAEAGGSAAPALSAGPFVLNLCSSTTPMALAQTDLPEL
Ga0306922_109976061	3300032001	Soil	MTATPNFASGAGAEAGSPAAPALSAGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEGRE
Ga0318559_104379302	3300032039	Soil	MTATPNFASGAVAEAALQAVPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFF
Ga0318556_102210501	3300032043	Soil	MTATPNFASSAGSEAGGQAAPVLSSGPFVLNLCSSTTPMALAQTDLPELRR
Ga0318506_105499921	3300032052	Soil	MTATPNFASGAVAEAALQAVPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFFVSRRFEEGRERFRLH
Ga0306924_100664685	3300032076	Soil	MTATANFASGAGAEAGGHAVPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFFVSRRFEEGRERFRLHMG
Ga0307472_1023908751	3300032205	Hardwood Forest Soil	MTATANFASVRTSTEARDMAAPATTAGPFVLNLCSSTTPMALAQTDLPELKRFTFFVSRRFEEARE
Ga0335080_110524532	3300032828	Soil	MTATPNFASDARTEDRGQAAPALSAGPFVLNLCSSTTPMALAQTDLPELRRFH
Ga0310914_110481581	3300033289	Soil	MTATPNFASGAGAEAGGPAAPALSTGPFVLNLCSSTTPMALAQTDLP
Ga0310914_115572951	3300033289	Soil	MTATPNFASGAVAEAALQAVPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFFVSRRFEEGRERFRLHMG
Ga0318519_100425784	3300033290	Soil	MTATPNFASGAGAEAGRAAAPALSTGPFVLNLCSSTTPMALAQTDLP
Ga0318519_101409933	3300033290	Soil	MTATPNFASGAVAEAAQQAVPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFFVSRRFEEGRERFRLH
Ga0318519_104164251	3300033290	Soil	MTATANFASGAGAEAGGHAVPALSAGPFVLNLCSSTTPMALAQTDLPELRRFHFFVSRRFEEGRERFRLHMGYFAT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047294

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences