NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F055962

Metagenome / Metatranscriptome Family F055962

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F055962
Family Type Metagenome / Metatranscriptome
Number of Sequences 138
Average Sequence Length 65 residues
Representative Sequence MSSDEKVLDFPRVEVTSEENARRVMVEATRLASLAPGEWRLWIDRSAERLRIPRATLQDL
Number of Associated Samples 95
Number of Associated Scaffolds 138

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 95.56 %
% of genes near scaffold ends (potentially truncated) 93.48 %
% of genes from short scaffolds (< 2000 bps) 94.93 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (60.145 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(16.667 % of family members)
Environment Ontology (ENVO) Unclassified
(18.116 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(60.145 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92
1E4A_10836400
2E41_08665770
3F14TC_1072543431
4JGI20194J14741_10039965
5JGI20196J14858_10062891
6F14TB_1004124551
7JGIcombinedJ51221_100425021
8JGIcombinedJ51221_102281312
9JGIcombinedJ51221_104710491
10Ga0062593_1019146741
11Ga0062595_1026625442
12Ga0070709_103931012
13Ga0070714_1022418521
14Ga0070710_101745111
15Ga0070710_107737271
16Ga0070696_1015308541
17Ga0070665_1016685612
18Ga0068859_1026099832
19Ga0075026_1007653722
20Ga0075017_1006538981
21Ga0075017_1014227482
22Ga0075017_1016299281
23Ga0075019_102015541
24Ga0075019_103851924
25Ga0075015_1002210551
26Ga0075015_1002808293
27Ga0070716_1018597551
28Ga0075014_1000790093
29Ga0075014_1008148321
30Ga0075021_110530461
31Ga0074059_121697922
32Ga0074060_100179841
33Ga0074062_100164291
34Ga0074062_100312491
35Ga0073928_101476681
36Ga0074063_100871512
37Ga0074063_101207091
38Ga0105247_114881032
39Ga0116222_10325243
40Ga0116122_12253681
41Ga0116224_100906833
42Ga0116216_102516331
43Ga0116223_103291621
44Ga0134125_107416743
45Ga0134128_108726592
46Ga0134128_109577682
47Ga0136449_1006213513
48Ga0136449_1014076202
49Ga0136449_1014313421
50Ga0136449_1016861711
51Ga0136449_1040748403
52Ga0150983_163538452
53Ga0137363_104212931
54Ga0137370_108623101
55Ga0137407_110222663
56Ga0164298_110944952
57Ga0164298_115063431
58Ga0164303_107964522
59Ga0164299_102650481
60Ga0164299_111029321
61Ga0164302_104567782
62Ga0164302_107454193
63Ga0164302_112054312
64Ga0164309_104969092
65Ga0164305_102374784
66Ga0164305_115699462
67Ga0164305_120154821
68Ga0181535_105308182
69Ga0181526_105103331
70Ga0132255_1042914731
71Ga0187812_10273431
72Ga0187802_100320442
73Ga0187802_102104122
74Ga0187817_101757572
75Ga0187817_101919621
76Ga0187817_107889361
77Ga0187822_101287711
78Ga0187816_101331002
79Ga0187816_101798632
80Ga0187804_102788151
81Ga0187804_105920991
82Ga0187883_101768562
83Ga0187862_101999231
84Ga0210407_101999871
85Ga0210407_105242301
86Ga0210407_106588791
87Ga0210399_101538351
88Ga0210401_113158861
89Ga0210406_101731734
90Ga0210400_105551372
91Ga0210405_102142181
92Ga0210408_102568961
93Ga0210396_106468052
94Ga0210393_103235513
95Ga0210393_103445772
96Ga0210393_108643622
97Ga0210386_106859751
98Ga0210386_110545602
99Ga0210383_102692453
100Ga0210383_116799522
101Ga0210394_103506372
102Ga0210390_115301831
103Ga0210392_109375151
104Ga0210392_114191891
105Ga0210410_109293831
106Ga0224563_10294391
107Ga0228598_10361072
108Ga0228598_10904761
109Ga0209176_101393131
110Ga0207665_103062963
111Ga0208365_10262242
112Ga0208726_1009431
113Ga0207946_1005703
114Ga0208603_10424351
115Ga0207948_10127251
116Ga0208043_11316562
117Ga0208324_10471421
118Ga0208696_10997861
119Ga0209067_103414083
120Ga0209698_101033004
121Ga0209698_105611081
122Ga0307323_103344081
123Ga0307296_102575293
124Ga0310038_100523583
125Ga0265763_10044641
126Ga0170824_1017635112
127Ga0170824_1028439802
128Ga0170824_1092816173
129Ga0310686_1046685872
130Ga0310686_1077631783
131Ga0310686_1155450202
132Ga0310686_1181570751
133Ga0307479_112505502
134Ga0318518_105572712
135Ga0307471_1003931353
136Ga0307471_1011782122
137Ga0307471_1014211552
138Ga0307471_1028768651
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.91%    β-sheet: 0.00%    Coil/Unstructured: 59.09%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

51015202530354045505560MSSDEKVLDFPRVEVTSEENARRVMVEATRLASLAPGEWRLWIDRSAERLRIPRATLQDLSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
39.9%60.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Peatland
Bog
Peatland
Freshwater Sediment
Iron-Sulfur Acid Spring
Watersheds
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Peatlands Soil
Soil
Arctic Peat Soil
Grass Soil
Soil
Forest Soil
Hardwood Forest Soil
Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Agricultural Soil
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
8.0%10.1%14.5%4.3%9.4%16.7%3.6%6.5%4.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E4A_108364002170459003Grass SoilMSSDEKVLDFPRVEVTSEENARRVMVEARRLARLAPGEWRLWIDRSAERLRIPRAILEDVIAAI
E41_086657702170459005Grass SoilMSSDEKVLDFPRVEGTSEENARRVMVEATRLASLAPGEWRLWIDRSAEGLRIPRAILEDVIAT
F14TC_10725434313300000559SoilMSSDEKVLDFPRVEVTPEENARRVMVEATRLASLAPGEWRLWIDRSAERLRIPHATLQGLIAAIIKDSENRVVR
JGI20194J14741_100399653300001383Arctic Peat SoilMSSDEKVLDFPRVEVTPEENARRVMVEATRLASLAPGEWRLWIDRTAERLGVPRATLE
JGI20196J14858_100628913300001417Arctic Peat SoilMSSDEKVLDFPRVEVTPEENARRVMVEATRLASLAPGEWRLWIDRTAERLGVPR
F14TB_10041245513300001431SoilMSSDEKVLDFPRVEVTPEENARRVMVEATRLASLAPGEWRLWIDRSAERLRIPRATLQGLIAAIIKDSEKKARDAETSRT*
JGIcombinedJ51221_1004250213300003505Forest SoilVSSDEKVFDFPKAEITSEEKVRRAMAEAKRLASLAPGEWRLWIDRAAERLGVPRATLEGLISAIIKD
JGIcombinedJ51221_1022813123300003505Forest SoilVSSDEKVLDFPRVEGTSEENARHVMIEATRLTRLAPGEWRLWIDRSAERLRIPRAILEDVIAAIIKDSE
JGIcombinedJ51221_1047104913300003505Forest SoilMSSDEKVLDFPRVEGTSEENARRVMVEATRLASLAPGEWRLWIDRSAERLRIPRAILEDVIAAIIK
Ga0062593_10191467413300004114SoilMSIDEKVLDFPRAEVTTEESARRVMVEATRLAGLAPGEWRLWVGRSAERLRVPRATLQDLIVAIIKNSEKMAR
Ga0062595_10266254423300004479SoilMSSDEKVLDFPRVEVTPEESARRVMVETTRLASLAPGEWRLWIDRSAERLRIPRATLQDLIVAIIKNSEKMARDA
Ga0070709_1039310123300005434Corn, Switchgrass And Miscanthus RhizosphereMSSDEKVLDFPRVEGTSEENARRVMAEATRLARLAPGEWRLWIDRSAERLRIPRAIL
Ga0070714_10224185213300005435Agricultural SoilMSSDEKVLDFPRVEGTSEENAKRVMVEARRLASLAPGEWRLWIDRSAERLRIPRATLQDLIVAIIKN
Ga0070710_1017451113300005437Corn, Switchgrass And Miscanthus RhizosphereMSSDEKVLDFPRVEGTSEENARRVMVEATRLASLAPGEWRLWIDRSAERLRIPRAILEDV
Ga0070710_1077372713300005437Corn, Switchgrass And Miscanthus RhizosphereMSSDEKVLDFPRVEGTSEENAKRVMVEARRLASLAPGEWRLWIDRSAERLRIPRAILEDV
Ga0070696_10153085413300005546Corn, Switchgrass And Miscanthus RhizosphereMSIDENVLDFPRAEVTPEESTRRVMVEATRLASLAPGEWRLWIDRSAERLRIPRAT
Ga0070665_10166856123300005548Switchgrass RhizosphereVSSDEKVFDFPKAEITSEEKVRRAMAEAKRLASLAPGEWRLWIDRAAERLGVPSATLRG*
Ga0068859_10260998323300005617Switchgrass RhizosphereVLDFAKADIDPEEKARRAMAEAKRLASLSPGEWRLWIDRSAERVGVPRATLEALISAIIKDSERKAREDKAEARR
Ga0075026_10076537223300006057WatershedsMKQRFEKYDFDFPKAEITSEEKVRRAMAEAQRLASLAPGEWRLWIDRAAERL
Ga0075017_10065389813300006059WatershedsMSSDKKVLDFPKAEITSEEKARRAMAEARRLANLTPGEWRLWIDRTAERLGVPRATLE
Ga0075017_10142274823300006059WatershedsVSSDESVLDFPKAEITSEEKARRAMAEAKRLASLTPGEWRLWIDRSAERLGVPRATLEGLISAIIKD
Ga0075017_10162992813300006059WatershedsVSSDESVLDFPKAEISSEEKARRAMAEARRLASLSPGEWRLWIDRSAERLGVPRATLEGL
Ga0075019_1020155413300006086WatershedsMSSDEKVLDFPRVEVTSEESARRVMVEATRLARLAPGEWRLWIDRSAERLRIPRA
Ga0075019_1038519243300006086WatershedsVSSDEKVFDFPKAEITSEEKARRAMAEAKRLASLAPGEWRLWIDRAAERLGVPRATLEGL
Ga0075015_10022105513300006102WatershedsVSSDEKVLDFPKAEITSEEKARRAMAEAKRLASLAPGEWQLWIDRAAERLGVPRATLEGLISAIIKDSERKA
Ga0075015_10028082933300006102WatershedsMSNGEKVLDFPRVEVTSEENARRVMVEATRLASLAPGEWRLWIDRSAERLRIPRAT
Ga0070716_10185975513300006173Corn, Switchgrass And Miscanthus RhizosphereMSSDEKVLDFPRVEVTPEESARRVMVEATRLASLAPGEWRLWIDRSAERLRIPRATLQDLIVAIIKNSEKMARDAET
Ga0075014_10007900933300006174WatershedsMSSDENVLDFPKVEVTSEKKARRMMAEATRLANLAPGEWRLWIDRSAERLGIPRATLEDLILEIIKDSEKK
Ga0075014_10081483213300006174WatershedsMSSDEKVLDFPRVEVTPEENARRVTVEATRLASLAPGEWRLWIDRSAERLRVPRATLQGLIVAIIKD
Ga0075021_1105304613300006354WatershedsMSSDKKVLDFPKAEITSAEKVRRAMAEAKRLASLAPGEWRLWIDRTAERFGVPRATLEGLISAIIKD
Ga0074059_1216979223300006578SoilMKQRFEKYDFDFPKAEITSEEKVRRAMAEAKRLASLAPGEWRLWIDRAAERLSLPRATLEGLISAIIKDSERKARED
Ga0074060_1001798413300006604SoilMKQRFEKYDFDFPKAEITSEEKVRRAMAEAQRLASLAPGEWRLWIDRAAERLSLPRATLEGLISA
Ga0074062_1001642913300006606SoilVSSDERVLDFPKAEITSEEKARRAMAEAKRLASLTPGEWRLWIDRTAERLGVPRATLEGLISAIIKDSERKAREDKA
Ga0074062_1003124913300006606SoilVSSDEKVLDFPKAEITSEEKARRAMAEAKRLASLAPGEWRLWIDRAAERLGVPRATLEGL
Ga0073928_1014766813300006893Iron-Sulfur Acid SpringVSSVEEVLDFPKAEITSEEKARQAMAEAKRLASLAPGEWRLWIDRTAERLGVPRATLEGLISAIIKDSERKAREDKAEAR
Ga0074063_1008715123300006953SoilVSSDERVLDFPKAEITSEEKARRAMAEAKRLASLTPGEWRLWIDRTAERLGVPRATLEGLISAIIKDSERKAREDKAEAR
Ga0074063_1012070913300006953SoilMSSDEKVLDFPRVEVTPEESARRVMVEATRLASLAPGEWRLWIDRSAERLRIPRAILEDV
Ga0105247_1148810323300009101Switchgrass RhizosphereLSIVSSDEKVFDFPKAEIDSEEQARRAIAEAKRLARLSPGEWRLWIDRSAERLG
Ga0116222_103252433300009521Peatlands SoilLRIVSSDEKVFDFPKAEITSEEKARRAMAEAKRLASLAPGEWRLWIDRAAERLGVPHATLEGLISAIIKDSERKAREDKAEA
Ga0116122_122536813300009639PeatlandMSSDENVLDFPKSEITSEEKARRAMAEARRLASLAPGEWRLWIDRAAERLGVPHATLEDLILEVIKDSGKKAREAETA
Ga0116224_1009068333300009683Peatlands SoilMSSDEKILDFPKAEITSEEKARRAMAEAKRLASLAPGEWQLWIDRAAERL
Ga0116216_1025163313300009698Peatlands SoilVSSDEKVLDFPKAEITSEEKARRAMAEAKRLASLAPGEWQLWIDRAAERLGVPRATLEGLISAIIKDSERKAREDKAEARR
Ga0116223_1032916213300009839Peatlands SoilMSSDKKVLDFPKAEITSEEKARRAMAEARRLASLAPGEWRLWIDRAAERLGVPHATLEGLISAIIKDSERK
Ga0134125_1074167433300010371Terrestrial SoilMSIDENVLDFPRAEVTPEESTRRVMVEATRLASLAPGEWRLWIDRNAERLRIPRATLQDLIAAIIKNR
Ga0134128_1087265923300010373Terrestrial SoilMSSDEKVLDFPRVEVTSEENARRVMVEATRLASLAPGEWRLWIDRSAERLRIPRAILEDVIAAIIKNSEK
Ga0134128_1095776823300010373Terrestrial SoilVSSHESVLDFAKADIDPEEKARRAMAEAKRLASLSPGEWRLWIDRSAERVGVPRATLEALISAIIKDSERKARE
Ga0136449_10062135133300010379Peatlands SoilMSSDEKVLDFPKAEVTPEENARRVTVEATRLASLAPGEWRLWIDHSAERLRIPRATLQGLIVATIKDSGKKARDA
Ga0136449_10140762023300010379Peatlands SoilMSSDENVLDFPKAEITLGEKTRRVMAEATRLASLAPGEWRLWIDRAAERLGVPHATLEGLISAIIKDSERKGRE
Ga0136449_10143134213300010379Peatlands SoilMSSDEKILDFPKAEITSEEKARRAMAEARRLASLAPGEWRLWIDRAAERLGVPHATL
Ga0136449_10168617113300010379Peatlands SoilMSSDEKVLDFPRVEVTSEENARRVMVEATRLASLAPGEWRLWIDRSAERLRIPRATL
Ga0136449_10407484033300010379Peatlands SoilMSSDEKVLDFPRVEVTSEESARRVMVEATRLARLAPGEWRLWIDRSAERLRIPRAILEDVIAAIIK
Ga0150983_1635384523300011120Forest SoilMSSDEKVLDFPRVEGTSEENARRVMVEATRLASLVPGEWRLWIDRSAERFRIPRATLEDVIAAIIKDSQ
Ga0137363_1042129313300012202Vadose Zone SoilLSIVSSDEKVFDFPKAEITSEEKVRRAMAEAKRLASLAPGEWRLWIDRAAERLGL
Ga0137370_1086231013300012285Vadose Zone SoilMSSDEKVLDFPKAEITSEEKARRAMAEAKRLASLTPGEWRLWIDRTAERLGVPRATLEGLISAIIKDSERKARE
Ga0137407_1102226633300012930Vadose Zone SoilMSSDEKVLDFPRVEVTPEENARRVMVEATRLASLPPGEWRLWIDRSAERLRIPRATLQGLIAAIIKDSEKKARDAETAA
Ga0164298_1109449523300012955SoilMSSDEKVLDFPSVEVTPEESASRVMVEATRLASLAPGEWRLWIDRSAERLRIPRATLQDLIVAIIKNSEKMARDAET
Ga0164298_1150634313300012955SoilVSSDEKVLDFPRVEGTSEENARRVMIEATRLTRLAPGEWRLWIDRSAERLRIPRAILEDVIAALIKHSQKTARDAET
Ga0164303_1079645223300012957SoilVSSDEKVLDFPRVEGTSEENARRVMIEATRLTRLAPGEWRLWIDRSAERLRIPRAILEDVIAAIIK
Ga0164299_1026504813300012958SoilMSSDEKVLDFPRVEGTSEENVRRVMIEATRLARLAPGEWRLWIDRSAERLRIPRAILEDVIA
Ga0164299_1110293213300012958SoilVSSDERVLDFPKAEISSEEKARRAMAEAKRLASLTPGEWRLWIDRTAERLGVPRATLEGLIS
Ga0164302_1045677823300012961SoilMSSDEKVLDFPRVEGTSEENARRVMVEATRLARLAPGEWRLWIDRSAERLRIPRATLEDVIAVIIKDSE
Ga0164302_1074541933300012961SoilMSSDEKVLDFPRVECTSEENAKRVMVEARRLASLAPGEWRLWIDRSAERLRIPRTILEDVIAAIIKDLEKKARDAETE
Ga0164302_1120543123300012961SoilLTVSSDEKVLDFPRVEVTSEESARRVMVEATRLARLAPGEWRLWIDRSAERLRIPRAILEDVIA
Ga0164309_1049690923300012984SoilMSSDEKVLDFPRVEGTSEENAKRVMVEATRLASLAPGEWRLWIDRNAERLRIPRATLE
Ga0164305_1023747843300012989SoilMSSDEKVLDFPRVEGTSEENAKRVMVEATRLARLAPGEWRLWIDRSAERLRIPRAILEDVIAAIIKNSEKKARD
Ga0164305_1156994623300012989SoilMSSDEKVLDFPRVEGTSEENAKRVMVEARRLASLAPGEWRLWIDRSAERLRIPRAILEDVIAAIIKNSEKKARD
Ga0164305_1201548213300012989SoilVSSDESVLDFPKAEITSEEKARRAMAEAKRLASLAPGEWRLWIDRAAERLGVPRATLEG*
Ga0181535_1053081823300014199BogVLDFPKAEITSEEKARRAMAEARRLASLAPGEWRLWIDRAAERLGVPHATLE
Ga0181526_1051033313300014200BogMSSDENVLDFPKVEVTSEENARRVMVEATRLASLAHGEWRLWIDRSAERFGIARATLEDL
Ga0132255_10429147313300015374Arabidopsis RhizosphereMSSDEKVLDFPKVGITSEEKARRAMAEAKRLASLTPGEWRLWIDRTAERLGVPRAALEGLISAII
Ga0187812_102734313300017821Freshwater SedimentMSSDEKVLDFPRVEVTSEENARRVMVEATRLASLAPGEWRLWIDRSAERLRIPRATLQDL
Ga0187802_1003204423300017822Freshwater SedimentMSNDKKVLDFPRVEVTSEENARRVMVEATRLASLAPGEWRLWIDRRAERLRVPRATLQGLIVAIIKDSEKLRSGQQKKF
Ga0187802_1021041223300017822Freshwater SedimentMSSDETALDFPRVEVTSEENAKRVMVEATRLASLAPGEWRLWIDRSAERLRIPRATLQDL
Ga0187817_1017575723300017955Freshwater SedimentMSSNEAVLDFPKAEITSEERARRAMAEARRLASLAPGEWRLWIDRAAERLGVPHATLEGLISAIIKD
Ga0187817_1019196213300017955Freshwater SedimentMSSDEKVLDFPRVEVTPEENARRVIVEATRLASLAPGEWRLWIDRSAERLRIPRATLQDLIAAI
Ga0187817_1078893613300017955Freshwater SedimentMSSDEKVLDFPRVEGTSEENARRVMIEATRLARLAPGEWRLWIDRSAERLRIPRAILEDVIAAIIK
Ga0187822_1012877113300017994Freshwater SedimentMSSDEKVLDFPRVEVTPEENARRVMVEATRLASLAPGEWRLWIDRSAQRLRIPRATLQGLIAAIIKDSEKKA
Ga0187816_1013310023300017995Freshwater SedimentMSSDEKVLDCPKAEIISEEKARRAMAEAKRLASLTPGEWRLWIDRAGERLGVPHATLEGLISAIIKDNERKGGRCLPRTARR
Ga0187816_1017986323300017995Freshwater SedimentVSSDESVLDFPKAEITSEEKARRAMAEAKRLASLTTGEWRLWIDRSAERLGVPRATLEGLISAIIKDSERKAREDKA
Ga0187804_1027881513300018006Freshwater SedimentMSSDEKVLDFPRVEGTSEENARRVMIEATRLARLAPGEWRLWIDRSAERLRIPRATLQGL
Ga0187804_1059209913300018006Freshwater SedimentMSGDEKVLDFPNAGITSEEKAMRAMGEAKRLARLTPGEWRLWIDRTAERLGVPRATLEGLISAIIKDSERKAREDKAEA
Ga0187883_1017685623300018037PeatlandMSRDQKVLDFPKAEITSEEKARRAMAEARRLASLAPGEWRLWIDRAAERLGVPHATLEDLILEIIKDSGK
Ga0187862_1019992313300018040PeatlandMRSDKKVLDFPKAEITSEEKARRAMAEARRLASLAPGEWRLWIDRAAERLGVPHATLEDLILEIIKDSGKKAREAET
Ga0210407_1019998713300020579SoilVSSDEKVLDFPKAGGTSEEKARRAMAEAKRLASLAPGEWRLWIDRAAERLGVPR
Ga0210407_1052423013300020579SoilVSSDESVLDFPKAEITSEEKARRAMAEAKRLASLTPGEWRLWIDRTAERLGVPRATLEG
Ga0210407_1065887913300020579SoilVSSDEKVFDFPKAEIASEEKVGRAMAEAKRLASLAPGEWRLWIDRAAERLGVPRATL
Ga0210399_1015383513300020581SoilVSSDEKVLDFPKAGGTSEEKARRAMAEAKRLASLAPGEWRLWIDRTAERFGVPRALPRDDVEKI
Ga0210401_1131588613300020583SoilMSSDEKVLDFPRVQGTSEESARRVMVEATRLASLVPGEWRLWIDRSAERLRIPRATLEDVIAAIIKDTQKKA
Ga0210406_1017317343300021168SoilVSSDEKVLDFPKAGGTSEEKARRAMAEAKRLASLAPGEWRLWIDRAAERLGVPRATLE
Ga0210400_1055513723300021170SoilMSSDEKVLDFPRVEGTSEENARRVMVEATRLARLAPGEWRLWIDRSAERLRIPRAILEDVIAAIIKNSEKKARDA
Ga0210405_1021421813300021171SoilMSSDEKVLDFPRVEVTPEENARRVTVEATRLASLAPGEWRLWIDRSAERLRIPRATLQGLIVAIIKDSEKK
Ga0210408_1025689613300021178SoilMSSDENVLDFPKVEVTEKKARRVMAEATRLANLAPGEWRLWIDRSAERLGI
Ga0210396_1064680523300021180SoilMSSDEKVLDFPRVEGTSEENARRVMIEATRLAKLAPGEWRLWIDRSAERLRIPRAILE
Ga0210393_1032355133300021401SoilMSSDEKVLDFPRVEGTSEENARRVMVEATRLARLAPGEWRLWIDRSAERLRIPRAILEDVIAAIIK
Ga0210393_1034457723300021401SoilVSSDEKVFDFPKAEITSEEKVRRAMAEAKRLASLAPGEWRLWIDRAAERLGVPRATLEGLISAIIKDSERKARE
Ga0210393_1086436223300021401SoilVSSDEKVLDFPRVEVTSEESARRVMVEAARLASLAPGEWRLWVDRSAERLRIPRATLQDLIVAII
Ga0210386_1068597513300021406SoilMSSDEKVLDFPRVEVTPEENARRVTVEATRLASLAPGEWRLWIDRSAERLRIPRATLQGL
Ga0210386_1105456023300021406SoilMSSDEKVLDFPRVEVTPEESARRVMVEATRLASLAPGEWRLWIDRSAERLRIPRAILEDIAA
Ga0210383_1026924533300021407SoilVSSDEKVFDFPKAEITSAEKVGRAMAEAKRLASLAPGEWRLWIDRAAERLGVPRVTLEGL
Ga0210383_1167995223300021407SoilMKQRFEKYDFDFPKAEITSEEKARRAMAEAKRLASLAPGEWRLWIDRAAERLGVPLAVLVQFISAII
Ga0210394_1035063723300021420SoilLTVSSDEKVLDFPRVEGTSEENARRVMIEATRLTRLAPGEWRLWIDRSAERLRIPRAILEDVI
Ga0210390_1153018313300021474SoilMSSDEKVLDFPRVEVTPEENARRVMVEATRMASLAPGEWRLWIDRSAERLRIPRATLEDDPGQD
Ga0210392_1093751513300021475SoilMSSDEKVLDFPRVEVTPEENARRVTVEATRLASLAPGEWRLWIDRSDERLRMPRATLQGLIVAIIE
Ga0210392_1141918913300021475SoilMKQRFEKYDFDFPKAEITSEEKARRAMAEAKRLASLAPGEWRLWIDRAAERLGVPRATLEGL
Ga0210410_1092938313300021479SoilMSSDEKVLDFPRVEVTPEENARRVTVEATRLASLAPGEWRLWIDRSAERLRMPRATLQGLIVAIIKDSEKKARD
Ga0224563_102943913300022731SoilMSSDEKVLDFPRVEVTPEENARRVTVEATRLASLAPGEWRLWIDRSAERLRIPRATLQGLIAAIIKDSEKK
Ga0228598_103610723300024227RhizosphereVSSDEKVFNFPKAEITSAEKVRRAMAEAQRLASLAPGEWRLWIDRAAERLGVPRATLEGLISAIIKD
Ga0228598_109047613300024227RhizosphereVSSDEKAFDSPKAEITSEENGMRAMAEAKRLASLAPGEWRLWIDRAAEWLGVPRATLEGSISAIIKDSERKAREDKAEAR
Ga0209176_1013931313300025854Arctic Peat SoilMSSDEKVLDFPRVEVTPEENARRVMVEATRLASLAPGEWRLWIDRTAERLGVPRATLEGL
Ga0207665_1030629633300025939Corn, Switchgrass And Miscanthus RhizosphereMSSDEKVLDFPRVEGTSEENARRVMVEATRLARLAPGEWRLWIDRSAERLRIPRAILE
Ga0208365_102622423300027070Forest SoilVSSDEKVLDFPKAEITSEEKVRRAMAEAKRLASLAPGEWRLWIDRAAERLGVPHATLEGLISAII
Ga0208726_10094313300027099Forest SoilVSSDEKVFDFPKAEITSEEKVRRAMAEAKRLASLAPGEWRLWIDRAAERLGVPRATLEGLISAIIKDSERKA
Ga0207946_10057033300027108Forest SoilMKQRFEKYDFDFPKAEITSEEKARRAMAEAKRLASLAPGEWRLWIDRAAERL
Ga0208603_104243513300027109Forest SoilMSSDEKVLDFPRVEVTPEESARRVMVEATRLASLAPGEWRLWIDRSAERLRIPRTILEDVIAAIIK
Ga0207948_101272513300027174Forest SoilMSSDEKVLDFPRVEGTSEENARRVMIEATRLASLAPGEWRLWIDRSAERLR
Ga0208043_113165623300027570Peatlands SoilMSSDEKVLNFPRVEVTSEENARRVMVEATRLASLAPGEWRLWIDHSAERLRIPRATLQGLIVA
Ga0208324_104714213300027604Peatlands SoilMSSDEKVLNFPRVEVTSEENARRVMVEATRLASLAPGEWRLWIDRSAERLRIPR
Ga0208696_109978613300027696Peatlands SoilMSSDEKVLNFPRVEVTSEENARRVMVEATRLASLAPGEWRLWIDRSAERLRIPRAILEEVIAAIIKNSEKKAR
Ga0209067_1034140833300027898WatershedsMSSDEKVLDFPRVEVTSEESARRVMVEATRLARLAPGEWRLWIDRSAERLRIPRATLE
Ga0209698_1010330043300027911WatershedsMSNDEKVLDFPRVEVTSEENARRVMVEATRLASLAPGEWRLWIDRSAERLRMPRATLQDLIV
Ga0209698_1056110813300027911WatershedsVSSDQSVLDFPKAEITSEEKARRAMAEAKRLASLSPGEWRLWIDRSAERLGVPRATLE
Ga0307323_1033440813300028787SoilMSSDEKVLDFPKAEITSEEKARRAMAEAKRLASLTPGEWRLWIDRTAERLGVPRATLEGLISAIIK
Ga0307296_1025752933300028819SoilMSSDEKVLDFPKAEITSEEKARRAMAEAKRLASLTPGEWRLWIDRTAERLGVPRATLEGL
Ga0310038_1005235833300030707Peatlands SoilMSSDEKVLNFPRVEVTSEENARRVMVEATRLASLAPGEWRLWIDRSAERLRIPRATL
Ga0265763_100446413300030763SoilMSSDEKVLDFPRVEGTSEENARRVMVEATRLASLAPGEWRLWIDRSAERLRIPRATLQDLIVAIIK
Ga0170824_10176351123300031231Forest SoilMSNDKKVLDFPRVEVTSEENARRVMVESTRLASLAPGEWRLWIDRSAERLGIPRPTLEDLIAA
Ga0170824_10284398023300031231Forest SoilMSSDEKVLDFPRVQGTSEENARRVMVEATRLASLAPGEWRLWIDRSAERLRIPRAILEDVIAAII
Ga0170824_10928161733300031231Forest SoilMSSDEKVLDFPKAGITSEEKARRAMAEAKRLASLTPGEWRLWIDRTAERLGVPR
Ga0310686_10466858723300031708SoilMSSDEKALDFPRVEVTPEVSASRVMVEATRLASLAPGEWRVWIDRSAERLGILRARLEDL
Ga0310686_10776317833300031708SoilMSSDEKVLDFPRVEVTPEENARRVTVEATRLASLAPGEWRLWIDRSAER
Ga0310686_11554502023300031708SoilVSSDEKVFNFPKAEITSAEKVRRAMAEAQRLASLAPGEWRLWIDRAAERLGVPRATLEGLISAIIK
Ga0310686_11815707513300031708SoilMSSDKKVFDFPKAEITSEEKARRAMAEARRLASLAPGEWRLWIDRAAERLGV
Ga0307479_1125055023300031962Hardwood Forest SoilVSSDESVLDFPKAEITSEEKARRAMAEAKRLASLTPGEWRLWIDRSAERLGVPRATLEGLISAIIKDSERKARED
Ga0318518_1055727123300032090SoilVSSDESVLHFPKAEITSEEKARRAMAEAKRLASLTPGEWRLWIDRSAERLGVPRATLEGLISAIIKDSERKARED
Ga0307471_10039313533300032180Hardwood Forest SoilVSSDEKAFDFPKAGITSEEKARRAMAEAKRLASLTPGEWRLWIDRTAERL
Ga0307471_10117821223300032180Hardwood Forest SoilMSNDKKVLDFPRVEVTSEESARRVMVEATRLARLAPGEWRLWIDRSAERL
Ga0307471_10142115523300032180Hardwood Forest SoilMSSDEKVLDFPRVEGTSEENARRVMIEATRLAKLAPGEWRLWIDRSAERLRIPRA
Ga0307471_10287686513300032180Hardwood Forest SoilMSSDEKVLDFPRVEVTPEENARRVMVEATRLASLAPGEWRLWIDRSAERL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.