3300001263: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY83

Overview

Basic Information

• IMG/M Taxon OID: 3300001263
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0085351 | Gp0055728 | Ga0012584
• Sample Name: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY83
• Sequencing Status: Permanent Draft
• Sequencing Center: J. Craig Venter Institute (JCVI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 1255905782
• Sequencing Scaffolds: 27
• Novel Protein Genes: 30
• Associated Families: 29

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	5
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum	6
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium rassoulzadegani	2
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae	1
All Organisms → cellular organisms → Eukaryota → Sar	1
Not Available	3
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Hymenostomatida → Tetrahymenina → Tetrahymenidae → Tetrahymena → Tetrahymena thermophila	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Mediophyceae → Biddulphiophycidae → Eupodiscales → Parodontellaceae → Trieres → Trieres chinensis	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Macroalgal Surface Microbial Communities
• Type: Host-Associated
• Taxonomy: Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Surface (saline)

Location Information

• Location: Botany Bay, Sydney, NSW, Australia
• Coordinates
  • Lat. (^o): -33.966629
  • Long. (^o): 151.166614
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000055	Metagenome / Metatranscriptome	3096	Y
F000088	Metagenome / Metatranscriptome	2436	Y
F000826	Metagenome / Metatranscriptome	873	Y
F001506	Metagenome / Metatranscriptome	681	Y
F002870	Metagenome / Metatranscriptome	524	Y
F008361	Metagenome / Metatranscriptome	334	Y
F018614	Metagenome / Metatranscriptome	234	Y
F021307	Metagenome / Metatranscriptome	219	Y
F023215	Metagenome / Metatranscriptome	211	Y
F026010	Metagenome / Metatranscriptome	199	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
BBAY83_10004675	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	4550
BBAY83_10005580	All Organisms → cellular organisms → Bacteria	4178
BBAY83_10027139	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium	1900
BBAY83_10027342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1893
BBAY83_10034922	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum	1665
BBAY83_10038238	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium rassoulzadegani	1587
BBAY83_10039411	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	1562
BBAY83_10052628	All Organisms → Viruses → Predicted Viral	1340
BBAY83_10071497	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum	1132
BBAY83_10080437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1059

Sequences

Scaffold ID	Protein ID	Family	Sequence
BBAY83_10004675	BBAY83_1000467510	F039653	MEPTLHFIYPFLFVGILDSVIKIFYQTDLKKLVAYSTVVEMH*
BBAY83_10005580	BBAY83_100055802	F028441	MTIKQLIKLEDKAKEVWVISPTLHYDTESKDFTELVSVNLGEKTKYRYIVPASRTVAKNLKVFKKIYKVTDAEMQKIFCILPESEFNPFIQEIAIYNASKECVACAGSSTEDTNDVIKFNQAHSKDMAKAFKAIWRKYKMENP*
BBAY83_10027139	BBAY83_100271393	F029460	LALYKSQGLGHDSDGILGLSPHKDWKKKKLHYLWSLKDNGIIDRAMVSFSITSKDMGETPYALFGGYNSS*
BBAY83_10027342	BBAY83_100273422	F008361	MKNGRQLFYKATLIVEQAKTNKDRLDACIELKKATARLEAINYLS*
BBAY83_10034922	BBAY83_100349223	F056632	MFFYISGIASTFFDTEKHHYGIFIGGKILRILVPFAIAIFAFLIPRLYFGQ*
BBAY83_10038238	BBAY83_100382382	F044539	MSNRINQFYYKIVLAYVIFFRECLNEYGWGKKIESEGIRLETNPELKMDIETKQFCLVNNAEHAPEICNEFVTVYMEYKKNIFDIPKHDQIDLTINLCHWLFQCQFTCSKLTMIA*
BBAY83_10039411	BBAY83_100394112	F035958	MQDPAVQMELFNLGIKMEQPPGKAPENLKRDDVVDLVKKSNDFAFDLFKKEYLNIMQKDPMIMPVLISAIAHDWVFKNHQWTEEQFKCALFEHKIYEDPTVAQHMQQK*
BBAY83_10052628	BBAY83_100526282	F060332	VLPDAYFGCTHGHIPPLKLESGAVSGQVEQWSRTDIGQRVSKFQPGENKLKLSNGKEYTYKALVLATGFDHSVEAIEGLPEMRLTPEEENVYVHVLDNKLTSERNYYHGWNHTNGDMICYSPKGPYKGEGNDFYALYYESFMRQDKIHGRSAANARIQFWTPNMEIFKFPYANEVALDECHKRGIDVMFGWEMLKVHNNQYNEKIATFKNVESGEIIEKPFTHANINPPSLTQNELVEANITDHTGLIDVNPYTL*
BBAY83_10071497	BBAY83_100714972	F090877	MGIPMFFYISGMSATFFNTERKGFGQFFYDKTLRLMLPFVLAIFIFLMPRLYYGQPYEDWTRPDKKNIENDYWEF*
BBAY83_10080437	BBAY83_100804372	F001506	MNQVLYNNRCKCNEEILVTKKRKSNNRSEGKPFLYPNQTELTSKTFQIKYEKTLSSLAKLLLNSFQNKYLYYAIDDILYGLKLTPTERDNLIALIYSPVLSLQNNFSINFFDIWIHEIYINETKITNKFLTTEFNNYESSSYITIKFLYRTKVTLKKQELLW*
BBAY83_10086066	BBAY83_100860662	F033053	MDEAAARAASHEVLDTHRHLTGKAREDYLNTYFKRTWAHFDVNQTGKIEVIKMPQFERFLCSDQQMYLW*LHQYEQVYLS*
BBAY83_10097397	BBAY83_100973972	F036727	MEVCPDHILEGLRENRKWYLRAEAIDNETYKRAMTVSDYNKGKSVSDLNIKSWSFGTAANLRSDSTW*
BBAY83_10100743	BBAY83_101007433	F021307	MNRILYNFYDSRCRCNEEFSITKKRKSNKRSEGKPLKYPELNESSLKTFQIRYDKKLSSIAKLVLNSFQNKYIYYAIDDILYSFKSDPSERDNLLAILYSPVLSLQNNFSINFFDIWIDE
BBAY83_10117305	BBAY83_101173051	F000088	MKYTGIIAVAALVGAISAAEITQKSSFAPPALGPYASDTDMQSSECNGADDDDIMYDVFDRYVVEERNPVGAGTGFYKLPKASGPQWAADIIRRFHVMDDDKVNAYVAANFDNFWKKYDNNGTGEIYESEGETFMRALLGPNNRFRLAPGALSDMDSGSLHVQNEFSATPDLQPFKHRYELKDQDYPDGRHALQ*
BBAY83_10117900	BBAY83_101179001	F000055	MKFYSIIAVAALFAASNVEAVEISRKKKKEDPPPTAADTPSSGYYGADEDDVFNNIFNHYAVPITNAAGVPTGQRVLYKDGAEKACAEILLVTKQVSEAKMEAYISEFFPRTWAKFDINNSGEIDVTESHTFMRSLLGRLNQFVLAPGSLTDIKVE*NQIIQLKE*L*
BBAY83_10125638	BBAY83_101256381	F002870	AALMAAANASQTAADLVSQALVHVESGSQARVHLESALESLTTKSEAEIIDSHSQTCAVPIDEKRALTIKVSPTYVLDEINSVTLKSFRKIVGYDTFESIRRKNRNESKDTSDYYNVTVSLMVRRKPAEASAAPARDPYNPEGSPSLAATLDKGFPYDD*
BBAY83_10125710	BBAY83_101257103	F079715	MMAAQRDHNLTEKQAKDARWPNMYGDQDPIKEVTKDMVSGADKRPIK*
BBAY83_10138955	BBAY83_101389551	F000826	MKFLSLSVAMLVASTEAASLNRHHVKGVTFVQTLPDVRADTVTEKDIAAHEAARADAAKVKKNPQASLLQSIRSDLEEVNLECSFGVSFSQNPRNNRARALSTKIANGIKDYTNKLIQTVDKSPNDALTEQNAHNIASLIFYDVQLEENMKTLGMDEDKELSVSVNRLKSLQKLYLFEQKGGENYLS*
BBAY83_10158456	BBAY83_101584561	F000055	MKYTKLIVLAALFAMVAEPVQTVSIERKKKKEDPPPTAADTPSSGYYGADEDDVYNNIFNHYAVPITNAAGAPTGQKVLYKAACEKACAEILLVTKQVSEAKMEAYMGEFYPRTWAKFDVNNSGEIDITEAHTFMRSLLGRLNQFVLAPGSLTDIKVE*TCIPTCLYLRS*
BBAY83_10180153	BBAY83_101801532	F093339	MNLSNTLFNNLTNKLKLDTYLLIKERTYVEKLLNQINYLKKLKEKNHKDLSITKFKTIANLDKAIYDDLMIMYIINVSFLKANTTIHVSDTKGNLKLFYSAGSVGLTGKQKRNRRMSMIKLISLLLKKATFLGKKPVALHLNNVNFYQSFIINRLKQTIYIKVIKSFNRAPYNGCRKRKV
BBAY83_10196176	BBAY83_101961762	F074570	MDKLLLRNISNAKFVIGGFAVAHTAYWCLISRPKLYADVFGWDGNGGRMLKIITDLTDEEIARLKYARRLAWHWNGNRTNSYARDQISDQELSDRGIEIKQEPYVEYVKRPPHDKYL*
BBAY83_10235707	BBAY83_102357072	F026010	VTDKPSPITMKLAQKSDSENLSVLFDHNVTRGALKNLVTDKPSPITMKLAQKSDSENLSVLFDHNVTRGALKNLVTDKPSPITMKLA*
BBAY83_10239646	BBAY83_102396461	F057397	MTTRLQTWILANTKPLQYLVNERLAVRPGIIGRFFKAMEMGKREYSQHTLLRSFKVVNYFWVQIFHIYGVARPIGTRFFTNYGNGPLNYSAIFCYFWCTLMIFARCRFNNAREDYAFNS*
BBAY83_10274862	BBAY83_102748621	F091615	YIEYVDKIMGNLVVGSHKGPEFSDDWDIRLDDLKGNPIFSINGENSYPIYRVNYNPSAFLFNMIPMGGEGEQLEFLTQVYEKYNLERLIYDFFEKKNMDIEVFGKEKGFNEWTPFRF*
BBAY83_10275406	BBAY83_102754062	F018614	LAEKLDIELTPELLSLGSNEEISNALIEIALGMGKTEADITSAMG*
BBAY83_10288078	BBAY83_102880783	F091624	MTHYDICRLRAQHFATDELVEMIDKLDKATLIAEEFATFRALKDEYESRWNNQENYNRLRSDAKMGGSFNAAIIESFFKADNNNKP
BBAY83_10291033	BBAY83_102910332	F023215	MKFSKDLLELRAKEAKLVKMKRYEEAEKVKMKADLLEEFERNKLDAEMHAI
BBAY83_14690349	BBAY83_146903491	F056056	MQTLSAEDKIELVDDAILKNEEFKKNVAIPYFKDIYKDLVNQSDDKNKGINRITMLTYCNLPGIIGERFVSVLDLSKTEYIDLREFVHGFFKIYYSTLETKIKLSFDM*
BBAY83_14703435	BBAY83_147034351	F040117	LKALRLRSNRNWMWFDVRYGTKFLYIFYMPQLFYVTVSYLLVPVWRRLDERYHLRFSEGEIDDMDDNEPFVTYQQRKKPMTRRKYADCVKLVYGGVEEYDFTPEQPQRYR*
BBAY83_14728727	BBAY83_147287271	F082263	HWGPLLRKDKVSNLGLALRWEAGLAGMEALASVPDADRTAAIDEWAGTVSGMVNGESVLDAWCVERSIVSIRVAKGDGWLSMSELRDLYRWMSMDVSGLVPNASEDEAVALSKPVYIGQPVDVSESHAIVRIALGVESLVSYLDNPAKTLEEDNLTVKKLSAIGKHFDTLKKSGQ*