Metagenome / Metatranscriptome Family F103496

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103496
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	75 residues
Representative Sequence	MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSAYEHKIDTTAGRKVDS
Number of Associated Samples	55
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	61.62 %
% of genes near scaffold ends (potentially truncated)	20.79 %
% of genes from short scaffolds (< 2000 bps)	71.29 %
Associated GOLD sequencing projects	46
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.446 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge (49.495 % of family members)
Environment Ontology (ENVO)	Unclassified (87.129 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (50.495 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.10% β-sheet: 0.00% Coil/Unstructured: 41.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF09374	PG_binding_3	30.69
PF14301	DUF4376	4.95
PF01520	Amidase_3	3.96
PF00196	GerE	1.98
PF13560	HTH_31	1.98
PF05838	Glyco_hydro_108	1.98
PF11753	DUF3310	0.99
PF01381	HTH_3	0.99
PF05635	23S_rRNA_IVP	0.99
PF05133	Phage_prot_Gp6	0.99
PF13550	Phage-tail_3	0.99
PF00271	Helicase_C	0.99
PF00176	SNF2-rel_dom	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	3.96
COG3926	Lysozyme family protein	General function prediction only [R]	1.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
All Organisms	root	All Organisms	44.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
cellular organisms	root	All Organisms → cellular organisms	41.58 %
Viruses	superkingdom	All Organisms → Viruses	2.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.97 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Synergistetes	phylum	All Organisms → cellular organisms → Bacteria → Synergistetes	21.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.98 %
Thermodesulfobacteria	phylum	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria	1.98 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Synergistia	class	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia	21.78 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	5.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.97 %
Syntrophia	class	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Syntrophia	1.98 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.98 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Synergistales	order	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales	21.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.97 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.98 %
Syntrophales	order	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Syntrophia → Syntrophales	1.98 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.99 %
Euryarchaeota archaeon RBG_13_31_8	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon RBG_13_31_8	0.99 %
unclassified Firmicutes sensu stricto	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Synergistaceae	family	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	21.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.97 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.98 %
Syntrophales	order	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Syntrophia → Syntrophales	1.98 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.99 %
Firmicutes bacterium ADurb.Bin193	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin193	0.99 %
Euryarchaeota archaeon RBG_13_31_8	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon RBG_13_31_8	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Synergistaceae	family	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	21.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.97 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.98 %
Syntrophales	order	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Syntrophia → Syntrophales	1.98 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.99 %
Firmicutes bacterium ADurb.Bin193	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin193	0.99 %
Euryarchaeota archaeon RBG_13_31_8	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon RBG_13_31_8	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Synergistaceae	family	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	21.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.97 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.98 %
Syntrophales	order	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Syntrophia → Syntrophales	1.98 %
unclassified Clostridiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae	0.99 %
Firmicutes bacterium ADurb.Bin193	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin193	0.99 %
Euryarchaeota archaeon RBG_13_31_8	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon RBG_13_31_8	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Synergistaceae	family	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	21.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.97 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.98 %
Syntrophales	order	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Syntrophia → Syntrophales	1.98 %
Clostridiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	0.99 %
Firmicutes bacterium ADurb.Bin193	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin193	0.99 %
Euryarchaeota archaeon RBG_13_31_8	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon RBG_13_31_8	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002163\|JGI24707J26582_10004566	All Organisms → cellular organisms → Bacteria	9489	Open in IMG/M
3300002166\|JGI24713J26584_10047202	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300002168\|JGI24712J26585_10075180	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	1255	Open in IMG/M
3300002898\|draft_10412630	Not Available	628	Open in IMG/M
3300003306\|Ga0004534J46558_1028577	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300005081\|Ga0072335_10118913	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4366	Open in IMG/M
3300005835\|Ga0078910_100912	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	2197	Open in IMG/M
3300005835\|Ga0078910_102246	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	4798	Open in IMG/M
3300006225\|Ga0082206_125400	Not Available	1396	Open in IMG/M
3300006225\|Ga0082206_138237	Not Available	1304	Open in IMG/M
3300006674\|Ga0101770_1019479	All Organisms → cellular organisms → Bacteria	21988	Open in IMG/M
3300006674\|Ga0101770_1024388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	8962	Open in IMG/M
3300006674\|Ga0101770_1050000	All Organisms → cellular organisms → Bacteria	7646	Open in IMG/M
3300006674\|Ga0101770_1112449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	2134	Open in IMG/M
3300006674\|Ga0101770_1133327	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	1148	Open in IMG/M
3300006674\|Ga0101770_1137234	Not Available	1071	Open in IMG/M
3300006674\|Ga0101770_1139256	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	1796	Open in IMG/M
3300009653\|Ga0116169_1062617	Not Available	1420	Open in IMG/M
3300009653\|Ga0116169_1172993	Not Available	732	Open in IMG/M
3300009653\|Ga0116169_1244625	Not Available	592	Open in IMG/M
3300009653\|Ga0116169_1251075	Not Available	582	Open in IMG/M
3300009654\|Ga0116167_1038363	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	2086	Open in IMG/M
3300009654\|Ga0116167_1068428	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	1389	Open in IMG/M
3300009654\|Ga0116167_1086046	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	1186	Open in IMG/M
3300009654\|Ga0116167_1160310	Not Available	773	Open in IMG/M
3300009654\|Ga0116167_1305981	Not Available	504	Open in IMG/M
3300009655\|Ga0116190_1018264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3629	Open in IMG/M
3300009655\|Ga0116190_1252361	Not Available	584	Open in IMG/M
3300009657\|Ga0116179_1074170	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	1330	Open in IMG/M
3300009657\|Ga0116179_1169217	Not Available	754	Open in IMG/M
3300009658\|Ga0116188_1094230	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	1205	Open in IMG/M
3300009663\|Ga0116181_1006581	All Organisms → cellular organisms → Bacteria	8117	Open in IMG/M
3300009663\|Ga0116181_1108986	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	1107	Open in IMG/M
3300009663\|Ga0116181_1204976	Not Available	735	Open in IMG/M
3300009663\|Ga0116181_1273579	Not Available	613	Open in IMG/M
3300009664\|Ga0116146_1064556	Not Available	1656	Open in IMG/M
3300009668\|Ga0116180_1187976	Not Available	812	Open in IMG/M
3300009687\|Ga0116144_10216521	Not Available	1016	Open in IMG/M
3300009710\|Ga0116192_1022255	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	2704	Open in IMG/M
3300009711\|Ga0116166_1185232	Not Available	768	Open in IMG/M
3300009711\|Ga0116166_1273431	Not Available	597	Open in IMG/M
3300009761\|Ga0116168_1110167	Not Available	733	Open in IMG/M
3300010236\|Ga0136246_10060816	Not Available	671	Open in IMG/M
3300010340\|Ga0116250_10111607	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	1780	Open in IMG/M
3300010340\|Ga0116250_10125920	All Organisms → Viruses → Predicted Viral	1648	Open in IMG/M
3300010340\|Ga0116250_10182154	Not Available	1302	Open in IMG/M
3300010340\|Ga0116250_10520138	Not Available	672	Open in IMG/M
3300010340\|Ga0116250_10573913	Not Available	630	Open in IMG/M
3300010340\|Ga0116250_10713879	Not Available	547	Open in IMG/M
3300010346\|Ga0116239_10306881	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	1110	Open in IMG/M
3300014203\|Ga0172378_10560795	Not Available	845	Open in IMG/M
3300014203\|Ga0172378_10602564	Not Available	809	Open in IMG/M
3300014203\|Ga0172378_11290927	Not Available	514	Open in IMG/M
3300014206\|Ga0172377_10435192	Not Available	1081	Open in IMG/M
3300014206\|Ga0172377_10464207	Not Available	1039	Open in IMG/M
3300014206\|Ga0172377_11220667	Not Available	571	Open in IMG/M
3300015214\|Ga0172382_10103340	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon RBG_13_31_8	2591	Open in IMG/M
3300015214\|Ga0172382_10666993	Not Available	731	Open in IMG/M
3300019218\|Ga0179954_1137998	Not Available	710	Open in IMG/M
3300019235\|Ga0179952_1227208	Not Available	1391	Open in IMG/M
3300019243\|Ga0179953_1057316	Not Available	1011	Open in IMG/M
3300025471\|Ga0209508_1020638	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	1928	Open in IMG/M
3300025471\|Ga0209508_1052756	Not Available	883	Open in IMG/M
3300025613\|Ga0208461_1013855	All Organisms → cellular organisms → Bacteria	3928	Open in IMG/M
3300025618\|Ga0208693_1023126	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	2606	Open in IMG/M
3300025618\|Ga0208693_1041186	All Organisms → Viruses → Predicted Viral	1682	Open in IMG/M
3300025618\|Ga0208693_1054673	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	1346	Open in IMG/M
3300025618\|Ga0208693_1106196	Not Available	786	Open in IMG/M
3300025657\|Ga0208823_1023673	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	2787	Open in IMG/M
3300025657\|Ga0208823_1027080	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	2519	Open in IMG/M
3300025657\|Ga0208823_1071441	All Organisms → Viruses → Predicted Viral	1177	Open in IMG/M
3300025657\|Ga0208823_1190817	Not Available	535	Open in IMG/M
3300025683\|Ga0208564_1010374	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Syntrophia → Syntrophales	5192	Open in IMG/M
3300025689\|Ga0209407_1131390	Not Available	745	Open in IMG/M
3300025861\|Ga0209605_1321121	Not Available	547	Open in IMG/M
3300027510\|Ga0209537_1094037	Not Available	717	Open in IMG/M
(restricted) 3300028564\|Ga0255344_1348657	Not Available	506	Open in IMG/M
(restricted) 3300028570\|Ga0255341_1151135	Not Available	992	Open in IMG/M
3300028601\|Ga0265295_1071223	Not Available	1914	Open in IMG/M
3300028602\|Ga0265294_10100318	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	2324	Open in IMG/M
3300028602\|Ga0265294_10206482	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	1404	Open in IMG/M
3300028603\|Ga0265293_10511984	Not Available	688	Open in IMG/M
3300028603\|Ga0265293_10581374	Not Available	626	Open in IMG/M
3300033161\|Ga0334893_1009258	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4000	Open in IMG/M
3300033161\|Ga0334893_1024755	Not Available	1734	Open in IMG/M
3300033162\|Ga0334901_1026261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1842	Open in IMG/M
3300033162\|Ga0334901_1043148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin193	1106	Open in IMG/M
3300033164\|Ga0334894_1105429	Not Available	511	Open in IMG/M
3300033167\|Ga0334898_1039408	Not Available	1485	Open in IMG/M
3300033167\|Ga0334898_1059847	Not Available	1012	Open in IMG/M
3300033174\|Ga0334882_1176919	Not Available	551	Open in IMG/M
3300033428\|Ga0334896_1041774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1146	Open in IMG/M
3300033985\|Ga0310135_000614	Not Available	23694	Open in IMG/M
3300033987\|Ga0310150_000396	Not Available	26096	Open in IMG/M
3300033999\|Ga0310134_001705	All Organisms → cellular organisms → Bacteria	15148	Open in IMG/M
3300033999\|Ga0310134_006088	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Syntrophia → Syntrophales	4901	Open in IMG/M
3300034520\|Ga0310136_007171	All Organisms → cellular organisms → Bacteria	3576	Open in IMG/M
3300034683\|Ga0310147_001095	Not Available	25127	Open in IMG/M
3300034683\|Ga0310147_004430	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	9830	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	85.86%
Environmental	Environmental	14.14%

Habitat	Taxonomy	Distribution
Wastewater	Engineered → Wastewater	49.49%
Bioreactor	Engineered → Bioreactor	20.20%
Terrestrial	Environmental → Terrestrial	8.08%
Solid Waste	Engineered → Solid Waste	8.08%
Aquatic	Environmental → Aquatic	6.06%
Biotransformation	Engineered → Biotransformation	5.05%
Built Environment	Engineered → Built Environment	2.02%
Unclassified	Engineered → Unclassified	1.01%

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	49.49%
Continuous Culture	Engineered → Bioreactor → Continuous Culture	11.11%
Anaerobic	Engineered → Bioreactor → Anaerobic	9.09%
Landfill	Engineered → Solid Waste → Landfill	8.08%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	7.07%
Freshwater	Environmental → Aquatic → Freshwater	5.05%
Mixed Alcohol Bioreactor	Engineered → Biotransformation → Mixed Alcohol Bioreactor	5.05%
Water Treatment Plant	Engineered → Built Environment → Water Treatment Plant	2.02%
Unclassified	Environmental → Aquatic → Unclassified	1.01%
Oil Reservoir	Environmental → Terrestrial → Oil Reservoir	1.01%
Unclassified	Engineered → Unclassified → Unclassified	1.01%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	49.49%
Marine Sediment Inoculum	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum	11.11%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	9.09%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	8.08%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	7.07%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	5.05%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified	5.05%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified	2.02%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	1.01%
Unclassified	Environmental → Terrestrial → Oil Reservoir → Unclassified	1.01%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified	1.01%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	49.49%
Unclassified	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified	11.11%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	9.09%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	8.08%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	7.07%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	5.05%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified	5.05%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified	2.02%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	1.01%
Unclassified	Environmental → Terrestrial → Oil Reservoir → Unclassified → Unclassified	1.01%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified → Unclassified	1.01%

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	49.49%
Sludge	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Sludge	9.09%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	8.08%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	7.07%
Food Waste	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Food Waste	7.07%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	5.05%
Biogas Fermentantion	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion	5.05%
Biogas Reactor	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Biogas Reactor	2.02%
Mixed Substrate Biogas Reactor	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Mixed Substrate Biogas Reactor	2.02%
Wastewater	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified → Wastewater	2.02%
Water	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Water	1.01%
Produced Fluid	Environmental → Terrestrial → Oil Reservoir → Unclassified → Unclassified → Produced Fluid	1.01%
Biogas Fermenter	Engineered → Unclassified → Unclassified → Unclassified → Unclassified → Biogas Fermenter	1.01%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002163	Biogas fermentation microbial communities from Germany - Plant 1 DNA1	Engineered	Open in IMG/M
3300002166	Biogas fermentation microbial communities from Germany - Plant 4 DNA1	Engineered	Open in IMG/M
3300002168	Biogas fermentation microbial communities from Germany - Plant 3 DNA2	Engineered	Open in IMG/M
3300002898	Metagenome Biopara biogasfermenter May 2013 pooled	Engineered	Open in IMG/M
3300002947	Subsurface hydrocarbon microbial communities from various worldwide Shell locations	Environmental	Open in IMG/M
3300003306	Biogas fermentation microbial communities from Germany - Plant 1 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300005081	Microbial Community from Halfdan Field MHBB9	Environmental	Open in IMG/M
3300005835	Biogas reactor microbial communities from SLU, Alnarp, Sweden - PacBio 1 to 3 kb reads	Engineered	Open in IMG/M
3300006225	Biogas reactor microbial communities from SLU, Alnarp, Sweden - PacBio 99 accuracy	Engineered	Open in IMG/M
3300006674	Anaerobic microbial community collected from a biogas reactor in Fredrikstad, Norway. Combined Assembly of Gp0117115, Gp0124038	Engineered	Open in IMG/M
3300009653	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC130_MetaG	Engineered	Open in IMG/M
3300009654	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR3_MetaG	Engineered	Open in IMG/M
3300009655	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR4_MetaG	Engineered	Open in IMG/M
3300009657	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG	Engineered	Open in IMG/M
3300009658	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR2_MetaG	Engineered	Open in IMG/M
3300009663	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaG	Engineered	Open in IMG/M
3300009664	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHG2_MetaG	Engineered	Open in IMG/M
3300009668	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG	Engineered	Open in IMG/M
3300009687	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG	Engineered	Open in IMG/M
3300009710	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC113_MetaG	Engineered	Open in IMG/M
3300009711	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR2_MetaG	Engineered	Open in IMG/M
3300009761	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC129_MetaG	Engineered	Open in IMG/M
3300010236	Terrestrial oil reservoir microbial community from Schrader Bluff Formation, Alaska - SB1	Environmental	Open in IMG/M
3300010340	AD_USOAca	Engineered	Open in IMG/M
3300010346	AD_USMOca	Engineered	Open in IMG/M
3300014203	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaG	Environmental	Open in IMG/M
3300014206	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaG	Engineered	Open in IMG/M
3300015214	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R metaG	Engineered	Open in IMG/M
3300019218	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNMR3_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300019235	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNMR1_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300019243	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNMR2_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300025471	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC129_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025613	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR4_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025618	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025657	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025683	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025689	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHG3_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025861	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG (SPAdes)	Engineered	Open in IMG/M
3300027510	Biogas fermentation microbial communities from Germany - Plant 4 DNA1 (SPAdes)	Engineered	Open in IMG/M
3300028564 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant18	Engineered	Open in IMG/M
3300028570 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant12	Engineered	Open in IMG/M
3300028601	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Methane capture system biofilm	Engineered	Open in IMG/M
3300028602	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3	Environmental	Open in IMG/M
3300028603	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R	Engineered	Open in IMG/M
3300033161	Sludge microbial communities from methane-producing bioreactor in Wageningen University, Netherlands - Granular Sludge_09_05-R3	Engineered	Open in IMG/M
3300033162	Sludge microbial communities from methane-producing bioreactor in Wageningen University, Netherlands - Granular Sludge_15_08-R3	Engineered	Open in IMG/M
3300033164	Sludge microbial communities from methane-producing bioreactor in Wageningen University, Netherlands - Granular Sludge_12_05 R3	Engineered	Open in IMG/M
3300033167	Sludge microbial communities from methane-producing bioreactor in Wageningen University, Netherlands - Granular Sludge_3_08-R3	Engineered	Open in IMG/M
3300033174	Sludge microbial communities from methane-producing bioreactor in Wageningen University, Netherlands - Granular Sludge_15_04-R1	Engineered	Open in IMG/M
3300033428	Sludge microbial communities from methane-producing bioreactor in Wageningen University, Netherlands - Granular Sludge_27_06-R3	Engineered	Open in IMG/M
3300033985	Fracking water microbial communities from deep shales in Oklahoma, United States - M1-7-3	Environmental	Open in IMG/M
3300033987	Fracking water microbial communities from deep shales in Oklahoma, United States - K-7-6	Environmental	Open in IMG/M
3300033999	Fracking water microbial communities from deep shales in Oklahoma, United States - M1-7-2	Environmental	Open in IMG/M
3300034520	Fracking water microbial communities from deep shales in Oklahoma, United States - M2-7-1	Environmental	Open in IMG/M
3300034683	Fracking water microbial communities from deep shales in Oklahoma, United States - K-7-3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24707J26582_100045669	3300002163	Biogas Fermentantion	MSFNDNIRKLPLAKLLVLCYSIFTCLLIILDAAGICKLTDISADLLKWLGSTVIIGYFGKSAYEHKINSEKCAKNE*
JGI24713J26584_100472021	3300002166	Biogas Fermentantion	MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSAY
JGI24712J26585_100751803	3300002168	Biogas Fermentantion	MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCTLTERSSDLLKWLGSTIIVGYFGKSAYEHKIDSTSRRKVG*
draft_104126301	3300002898	Biogas Fermenter	MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTTLCPLTEKSADLLKWLGSTIIVGYFGKSAYEHKIDSTKERR*
DTI14_103543	3300002947		MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSSYEHKIDT
DTI14_109641	3300002947		MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSSYEHKIDTTAGRKVN*
Ga0004534J46558_10285773	3300003306	Biogas Fermentantion	MPIEDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSAYEHKIDTTAGRKVNS*
Ga0072335_101189137	3300005081	Water	MSINDSVRQMPLTKLIALCFTVFVCVLIVLDVTTLCPLTERSADLLKWMGSTIIVGYFGKSAYEHNVNVKKGEKS*
Ga0078910_1009125	3300005835	Biogas Reactor	MPIEDKIRXLPLTKLIALCFTIFTCVLIVLDVTSFCQLTERSADLLKWLGSTIIVGYFGKSAYEHKVNSDAGRRIDQ*
Ga0078910_1022468	3300005835	Biogas Reactor	MPIDDRIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSAYEHKIDTTAGRKVNS*
Ga0082206_1254002	3300006225	Mixed Substrate Biogas Reactor	MPIDDKIRRLPLTKLIALCFTIFTCVLIVLDVTSFCQLTERSADLLKWLGSTIIVGYFGKSAYEHKVNSDAGRRIDQ*
Ga0082206_1382373	3300006225	Mixed Substrate Biogas Reactor	MQIDDRIRRLPLTKLIALCFTIFTCVLIVLDVTSLCTLTERSADLLKWLGSTIIVGYFGKSAYEHKVNSDAGRRIDQ*
Ga0101770_10194798	3300006674	Food Waste	MPFNDRIRKLPLTKLIALCFTIFTCVLIVLDVTTLCPLTEKSADLLKWLGSTIIVGYFGKSAYEHKIDSTKERR*
Ga0101770_102438812	3300006674	Food Waste	MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSAYEHKIDSTKERR*
Ga0101770_105000010	3300006674	Food Waste	MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGXTXXVGYFGKSAYEHKIDSTKERR*
Ga0101770_11124494	3300006674	Food Waste	MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVXTLCPLTEKSADLLKWLGSTIIVGYFGKSAYEHKIDSTKERR*
Ga0101770_11333271	3300006674	Food Waste	MPFNDEIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSSDLLKWLGSTIIVGYFGKSAYEHKVNSDAGRRIDQ*
Ga0101770_11372342	3300006674	Food Waste	MPFNDRIRKLPLTKLIALCFTMFTCVLIVLDVTSLCPLTERSADLLKWLGXTIXVGYFGKSAYXXXXDSTKERR*
Ga0101770_11392563	3300006674	Food Waste	MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCTLTERSADLLKWMGSTIIVGYFGKSAYEHKIDTTAGRKVN*
Ga0116169_10626173	3300009653	Anaerobic Digestor Sludge	MPLDDRIRRLPLTKLIALCFTVFTCVLIVLDVTTLCPLTDKSADLLKWLGSTIIVGYFGKSAYEHKINTTSGMKQ*
Ga0116169_11729931	3300009653	Anaerobic Digestor Sludge	MPIDDKIRRLPLTKLIALCFTIFTCVLIILDVTSLCPLTERSADLLKWLGSTIIVGYFSKSAYEHKVNSDSGRRIDQ
Ga0116169_12446251	3300009653	Anaerobic Digestor Sludge	PLTKLIALCFTIFTCVLIVLDVTTLCPLTEKSADLLKWLGSTIIVGYFGKSAYEHKIDTTAGRKVG*
Ga0116169_12510751	3300009653	Anaerobic Digestor Sludge	MPIDDRIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFSKSAYEHKVNSDSGRRIDQ*
Ga0116167_10383634	3300009654	Anaerobic Digestor Sludge	MPLDDRIRKLPLTKLIALCFTVFTCVLIVLDVTTLCPLTDKSADLLKWLGSTIIVGYFGKSAYEHKINTTSGAKQ*
Ga0116167_10684283	3300009654	Anaerobic Digestor Sludge	VNDMPLDDRIRKLPLTKLIALCFTVFTCVLIVLDVTTLCPLTDKSADLLKWLGSTIIVGYFGKSAYEHKINTTSGVKQ*
Ga0116167_10860463	3300009654	Anaerobic Digestor Sludge	VIEMSFNDGVRRLPLTKLIALCFTIFTCVLILLDVSSLCPLTDKSADLLKWLGSTIIVGYFGKSAYEHKVNTISEKRSGQP*
Ga0116167_11603103	3300009654	Anaerobic Digestor Sludge	MPFTDGVRKLPLTKLIALCFTIFTCVLIVLDVTTLCPLTEKSADLLKWLGSTIIVGYFGKSAYEH
Ga0116167_13059812	3300009654	Anaerobic Digestor Sludge	MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIVVGYFGKSAYEHKIDTTAGRKVDS*
Ga0116190_10182642	3300009655	Anaerobic Digestor Sludge	MPIDDKIRRLPLTKLIALCFTIFTCVLIVLDVTTLCPLTEKSADLLKWLGSTIIVGYFGKSAYEHKIDTTAGRKVG*
Ga0116190_12523612	3300009655	Anaerobic Digestor Sludge	LDDRIRRLPLTKLIALCFTVFTCVLIVLDVTTLCPLTDKSADLLKWLGSTIIVGYFGKSAYEHKINTTSGVKQ*
Ga0116179_10741701	3300009657	Anaerobic Digestor Sludge	MPFTDGVRKLPLTKLIALCFTVFTCVLIVLDVTSLYPLTERSADLLKWLGSTIIVGYFGKSAYEHKIDTT
Ga0116179_11692172	3300009657	Anaerobic Digestor Sludge	MSLNDRVRGLPLTKLIALCFTVFTCALIVLDITTLCPLTDRSADLLKWLGSTIIVGYFGKSAYEHKVNTTSGVKQ*
Ga0116188_10942301	3300009658	Anaerobic Digestor Sludge	MPLDDRIRRLPLTKLIALCFTVFTCVLIVLDVTTLCPLTDKSADLLKWLGSTIIVGYFGKSAYEHKINTTSG
Ga0116181_100658110	3300009663	Anaerobic Digestor Sludge	MSFNSGIRNMPLTKLLVLCFTIFTCILIILDVASICKLTDLSADLLKWLGSTIIIGYFGKSAYEHKINTNNEKGANNEQ*
Ga0116181_11089861	3300009663	Anaerobic Digestor Sludge	MPFTDGVRKLPLTKLIALCFTVFTCVLIVLDVTSLYPLTERSADLLKWLGSTIIVGYFGKSAY
Ga0116181_12049761	3300009663	Anaerobic Digestor Sludge	NRMPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSSDLLKWLGSTIIVGYFGKSAYEHKIDTTAGRKVK*
Ga0116181_12735792	3300009663	Anaerobic Digestor Sludge	MTIEDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSAYEHKIDTTAGRKVN*
Ga0116146_10645564	3300009664	Anaerobic Digestor Sludge	MPLDDRIRKLPLTKLIALCFTVFTCVLIVLDVTTLCPLTDKSADLLKWLGSTIIVGYFGKSAYEHKINTTSGVKQ*
Ga0116180_11879763	3300009668	Anaerobic Digestor Sludge	YWVNDMSLNDRVRGLPLTKLIALCFTVFTCVLIVLDVTTLCPLTDKSADLLKWLGSTIIVGYFGKSAYEHKINTTSGMKQ*
Ga0116144_102165213	3300009687	Anaerobic Digestor Sludge	MPLTKLIALCFTVFVCVLIVLDVTTLCPLTERSADLLKWLGSTIIVGYFGKSAYEHNLNVRKGEKS*
Ga0116192_10222554	3300009710	Anaerobic Digestor Sludge	MPIEDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCTLTERSSDLLKWLGSTIIVGYFGKSAYEHKINTTSGVK*
Ga0116166_11852321	3300009711	Anaerobic Digestor Sludge	VNKMPFTDGVRKLPLTKLIALCFTIFTCVLIVLDVTTLCPLTEKSADLLKWLGSTIIVGYFGKSAYEH
Ga0116166_12734312	3300009711	Anaerobic Digestor Sludge	MPLDDRIRKLPLTKLIALCFTVFTCVLIVLDVTTLCPLTDKSADLLKWLGSTIIVGYFGKSAYEHKINTTSGMKQ*
Ga0116168_11101671	3300009761	Anaerobic Digestor Sludge	MPLDDRIRRLPLTKLIALCFTVFTCVLIVLDVTTLCPLTDKSADLLKWLGSTIIVGYFGKSAYE
Ga0136246_100608162	3300010236	Produced Fluid	VIEMPFADGVRKLPLAKMIALYFTVFVCVLIVLDVTTLCPLTERSSDLLKWMGSTIIVGYFGKSAYEHGVDSKRGDKQ*
Ga0116250_101116073	3300010340	Anaerobic Digestor Sludge	MSMDDRIRRLPLTKLIALCFTIFTCVLIVLDVTTLCPLTEKSADLLKWLGSTIIVGYFGKSAYEHKVNSDAGRRIDQ*
Ga0116250_101259203	3300010340	Anaerobic Digestor Sludge	MSMDDRIRRLPLTKLIALCFTIFTCVLIFLDVTSLCQLTERSADLLKWLGSTIIVGYFGKSAYEHKVNSDAGRRIDQ*
Ga0116250_101821542	3300010340	Anaerobic Digestor Sludge	MSMDDRIRRLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFSKSAYEHKVNSDSGRRIDQ*
Ga0116250_105201381	3300010340	Anaerobic Digestor Sludge	MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSAYEHKIDTTAGRKVDS*
Ga0116250_105739131	3300010340	Anaerobic Digestor Sludge	KLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSAYEHKVNSDAGRRIDQ*
Ga0116250_107138791	3300010340	Anaerobic Digestor Sludge	MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSAYEHKVNSDAGRRIDQ*
Ga0116239_103068811	3300010346	Anaerobic Digestor Sludge	MPLDDRIRRLPLTKLIALCFTVFTCVLIVLDVTTLCPLTDKSADLLKWLGSTIIVGYFGKSAYEHKINTTSGVKQ*
Ga0172378_105607953	3300014203	Groundwater	MPFNDRIRKLPLTKLIALCFTIFACVLIVLDVTSLCPLTERSVDLLKWLGSTIIVGYFGKSAYEHKIDTTTGR
Ga0172378_106025642	3300014203	Groundwater	MPIDDKIRRLPLTKLIALCFTIFTCVLIVLDVTSLCTLTERSADLLKWLGSTIIVGYFGKSAYEHKIDSTKERR*
Ga0172378_112909272	3300014203	Groundwater	VIEMKFNDGVRRLPLTKLIALCFTIFTCALIVLDVTTLCPLTERSADLLKWLGSTIIVGYFGKSAYEHKINVGSEKKSGQL*
Ga0172377_104351922	3300014206	Landfill Leachate	MQIDDRIRRLPLTKLIALCFTIFTCVLIVLDVTSFCQLTERSADLLKWLGSTIIVGYFGKSAYEHKIDTTAGRKGN*
Ga0172377_104642074	3300014206	Landfill Leachate	MTIEDKIRKLPLTKLIALCFTIFTCVLIVLDITSLCPLTERSADLLKWLGSTIIVGYFGKSAYEHKVNSDAGRRIDQ*
Ga0172377_112206672	3300014206	Landfill Leachate	MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSAYEHKVNSDAGRRMDQ*
Ga0172382_101033403	3300015214	Landfill Leachate	VIEMKFNDGVRRLPLTKLIALCFTIFTCALIVLDVTMLCPLTDKSADLLKWLGSTIIVGYFGKSAYEHKVNTISEKKSDKP*
Ga0172382_106669932	3300015214	Landfill Leachate	VIEMQFADGVRKLPLTKLIALYFTIFTCILIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSAYEHGVNIKKSDQS*
Ga0179954_11379981	3300019218	Anaerobic Digestor Sludge	TDGVRKLPLTKLIALCFTIFTCVLIVLDVTTLCPLTEKSADLLKWLGSTIIVGYFGKSAYEHKIDTTAGRKVG
Ga0179952_12272082	3300019235	Anaerobic Digestor Sludge	MPIDDKIRRLPLTKLIALCFTIFTCVLIVLDVTTLCPLTEKSADLLKWLGSTIIVGYFGKSAYEHKIDTTAGRKVG
Ga0179953_10573162	3300019243	Anaerobic Digestor Sludge	VIEMSFNDGVRRLPLTKLIALCFTIFTCVLILLDVSSLCPLTDKSADLLKWLGSTIIVGYFGKSAYEHQVNTISEKRSGQP
Ga0209508_10206384	3300025471	Anaerobic Digestor Sludge	MPLDDRIRRLPLTKLIALCFTVFTCVLIVLDVTTLCPLTDKSADLLKWLGSTIIVGYFGKSAYEHKINTTSGMKQ
Ga0209508_10527562	3300025471	Anaerobic Digestor Sludge	MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSAYEHKIDSTKERR
Ga0208461_10138555	3300025613	Anaerobic Digestor Sludge	VIEMSFNDGVRRLPLTKLIALCFTIFTCVLILLDVSSLCPLTDKSADLLKWLGSTIIVGYFGKSAYEHKVNTISEKRSGQP
Ga0208693_10231265	3300025618	Anaerobic Digestor Sludge	MDDRIRRLPLTKLIALCFTIFTCVLIVLDVTTLCPLTEKSADLLKWLGSTIIVGYFGKSAYEHKVNSDAGRRIDQ
Ga0208693_10411864	3300025618	Anaerobic Digestor Sludge	MDDRIRRLPLTKLIALCFTIFTCVLIFLDVTSLCQLTERSADLLKWLGSTIIVGYFGKSAYEHKVNSDAGRRIDQ
Ga0208693_10546733	3300025618	Anaerobic Digestor Sludge	MSLNDRVRGLPLTKLIALCFTVFTCALIVLDITTLCPLTDRSADLLKWLGSTIIVGYFGKSAYEHKVNTTSGVKQ
Ga0208693_11061962	3300025618	Anaerobic Digestor Sludge	MSFNDGVRRLPLTKLIALCFTIFTCVLILLDVSSLCPLTDKSADLLKWLGSTIIVGYFGKSAYEHKVNTISEKKSGQL
Ga0208823_10236735	3300025657	Anaerobic Digestor Sludge	MKFNDGVRRLPLTKLIALCFTIFTCVLILLDVTSLCSLTERSTDLLKWLGSTIIVGYFGKSAYEHKVNTISEKKSDKP
Ga0208823_10270804	3300025657	Anaerobic Digestor Sludge	MSMDDRIRRLPLTKLIALCFTIFTCVLIVLDVTTLCPLTEKSADLLKWLGSTIIVGYFGKSAYEHKVNSDAGRRIDQ
Ga0208823_10714412	3300025657	Anaerobic Digestor Sludge	MSMDDRIRRLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFSKSAYEHKVNSDSGRRIDQ
Ga0208823_11908172	3300025657	Anaerobic Digestor Sludge	MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSAYEHKVNSDAGRRIDQ
Ga0208564_10103741	3300025683	Anaerobic Digestor Sludge	NYLVIDMSFNDGVRRLPLTKLIALCFTMFTCVLILLDVSSLCPLTDRSADLLKWLGSTIIVGYFGKSAYEHKVNTISEKKSDKP
Ga0209407_11313903	3300025689	Anaerobic Digestor Sludge	YWVNDMPLDDRIRKLPLTKLIALCFTVFTCVLIVLDVTTLCPLTDKSADLLKWLGSTIIVGYFGKSAYEHKINTTSGAKQ
Ga0209605_13211212	3300025861	Anaerobic Digestor Sludge	VRQMPLTKLIALCFTVFVCVLIVLDVTTLCPLTERSADLLKWLGSTIIVGYFGKSAYEHNLNVRKGEKS
Ga0209537_10940372	3300027510	Biogas Fermentantion	MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTTLCPLTEKSADLLKWLGSTIIVGYFGKSAYEHKIDSTKERR
(restricted) Ga0255344_13486571	3300028564	Wastewater	VTEMSFNDGVRRLPLTKLIALCFTIFTCVLILLDVSSLCPLTDRSADLLKWLGSTIIVGYFGKSAYEHKVNTISERANSQP
(restricted) Ga0255341_11511352	3300028570	Wastewater	MSFNDGVRRLPLTKLIALCFTIFTCVLILLDVSSLCPLTDRSADLLKWLGSTIIVGYFGKSAYEHKVNTISERVNGQP
Ga0265295_10712236	3300028601	Landfill Leachate	MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSAYEHKIDTTAGREVNS
Ga0265294_101003183	3300028602	Groundwater	MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSAYEHKIDTTAGRKANS
Ga0265294_102064823	3300028602	Groundwater	MTIEDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSAYEHKIDTTAG
Ga0265293_105119841	3300028603	Landfill Leachate	MPFNDKIRKLPLTKLIALCFTIFACVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSSYEHKIDTTAGRKVNS
Ga0265293_105813742	3300028603	Landfill Leachate	VIEMKFNDGVRRLPLTKLIALCFTIFTCALIVLDVTMLCPLTDKSADLLKWLGSTIIVGYFGKSAYEHKVNTISEKKSDKP
Ga0334893_10092586	3300033161	Sludge	VIEMPFADGVRKLPLTKLIALCFTMFVCILIVLDVTTLCPLTERSADLLKWLGSTIIVGYFGKSAYEHNLNVRKGEKS
Ga0334893_10247555	3300033161	Sludge	MPFADGVRRLPLTKLIALWFTMFVCVIIILDVTTLCPLTERSADLLKWLGSTIIVGYFGKSAYEHGVNIKKSDQS
Ga0334901_10262613	3300033162	Sludge	MPFADGVRKLPLTKLIALCFTMFVCILIVLDVTTLCPLTERSADLLKWLGSTIIVGYFGKSAYEHNLNVRKGEKS
Ga0334901_10431482	3300033162	Sludge	MSINDSVRQMPLTKLIALCFTVFVCVLIVLDVTTLCPLTERSADLVKWLGSTIIVSYFGKSAYEHNVNVKKGEKS
Ga0334894_11054292	3300033164	Sludge	MSINDSVRQMPLTKLIALCFTVFVCVLIVLDVTTLCPLTERSADLVKWLGSTIIVSYFGKSAYEHNVNVRKGEKS
Ga0334898_10394082	3300033167	Sludge	VIEMPFADGVRRLPLTKLIALWFTMFVCVIIILDVTTLCPLTERSADLLKWLGSTIIVGYFGKSAYEHGVNIKKSDQS
Ga0334898_10598473	3300033167	Sludge	MSINDSVRQMPLTKLIALCFTVFVCVLIVLDVTTLCPLTERSADLLKWLGSTIIVGYFGKSAYEHNVNVKKGEKS
Ga0334882_11769191	3300033174	Sludge	WVIEMPFADGVRKLPLTKLIALCFTMFVCILIVLDVTTLCPLTERSADLLKWLGSTIIVGYFGKSAYEHNLNVRKGEKS
Ga0334896_10417743	3300033428	Sludge	MSINDSVRQMPLTKLIALCFTVFVCVLIVLDVTTLCPLTERSADLVKWLGSTIIVGYFGKSAYEHGVNIKKSDQS
Ga0310135_000614_2390_2623	3300033985	Fracking Water	MPFNDKIRKLPLTKLIALCFTIFTCVLIVLDVTSLCPLTERSADLLKWLGSTIIVGYFGKSSYEHKIDTTAGRKVNS
Ga0310150_000396_228_461	3300033987	Fracking Water	MSLNDRIRKLPLTKLIALCFTIFTCVLIVLDVTTLCPLTERSADLLKWLGSTIIVGYFGKSAYEHKIDTTTEKKVNS
Ga0310134_001705_5192_5422	3300033999	Fracking Water	MPIDDKIRRLPLTKLIALCFTIFTCVLIILDVTSLCPLTERSADLLKWLGSTIIVGYFGKSAYEHKIDTAERRKDS
Ga0310134_006088_148_375	3300033999	Fracking Water	MSFNDGVRRLPLTKLIALYFTIFTCVLIVLDVTSLCPLTERSADLLKWLGGTIIVGYFGKSAYEHGVNIKKSDQS
Ga0310136_007171_666_902	3300034520	Fracking Water	MPLNDRVRRLPLTKLIALCFTIFTCVLILLDVMSVCQLTDRSTDLLKWLGSTIIVGYFGKSAYEHKVNTISERANSQP
Ga0310147_001095_3099_3323	3300034683	Fracking Water	MPLDDRIRKLPLTKLIALYFTVFTCVLIVLDVTTLCPLTDKSADLLKWLGSTIIVGYFGKSAYEHKMNTTSGVK
Ga0310147_004430_6336_6563	3300034683	Fracking Water	MPLDDRIRKLPLTKLIALCFTVFTCVLIVLDVTTLCPLTDKSADLLKWLGSTIIVGYFGKSAYEHKINTTSGMKQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters