Metagenome / Metatranscriptome Family F083435

Basic Information
Family ID	F083435
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	83 residues
Representative Sequence	GTLDDLTTEEYEQYLKNKDNKDSIQKAKRRDSKIRWVYRQERLKNRFIQLLAKFGIKINTVSKNDEGDDLYEEFKKFSKK
Number of Associated Samples	101
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (36.283 % of family members)
Environment Ontology (ENVO)	Unclassified (43.363 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (61.947 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.70% β-sheet: 0.00% Coil/Unstructured: 46.30%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF01788	PsbJ	61.95
PF00283	Cytochrom_B559	14.16
PF00284	Cytochrom_B559a	10.62
PF02419	PsbL	6.19
PF17088	YCF90	2.65
PF02392	Ycf4	2.65
PF02605	PsaL	0.88

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.11%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.58%
Terrestrial	Environmental → Terrestrial	3.54%
Wastewater	Engineered → Wastewater	0.89%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	69.03%
Freshwater	Environmental → Aquatic → Freshwater	24.78%
Soil	Environmental → Terrestrial → Soil	3.54%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.77%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	0.89%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	38.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	14.16%
Coastal	Environmental → Aquatic → Marine → Coastal	11.50%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.19%
Lake	Environmental → Aquatic → Freshwater → Lake	4.42%
Inlet	Environmental → Aquatic → Marine → Inlet	4.42%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.54%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.65%
Strait	Environmental → Aquatic → Marine → Strait	2.65%
River	Environmental → Aquatic → Freshwater → River	1.77%
Oceanic	Environmental → Aquatic → Marine → Oceanic	1.77%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.77%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.77%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.89%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.89%
Sediment	Environmental → Aquatic → Marine → Sediment	0.89%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	36.28%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	14.16%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	9.73%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.19%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	4.42%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	4.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.54%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	1.77%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	1.77%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.77%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.89%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.89%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	0.89%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.89%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	36.28%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	10.62%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.42%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	3.54%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.54%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	3.54%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.54%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.65%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	2.65%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	2.65%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.77%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater Microbial Mat	1.77%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.77%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.77%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.89%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.89%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.89%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	0.89%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.89%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.89%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.89%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	0.89%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.89%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.89%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.89%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine	0.89%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.89%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.89%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.89%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	0.89%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	0.89%
Ocean Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water	0.89%

Visualization

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001373	YB-Mouth-sed	Environmental	Open in IMG/M
3300002361	Freshwater microbial communities from Lake Mendota, WI - 30NOV2011 deep hole epilimnion	Environmental	Open in IMG/M
3300003265	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_66_BLW_10	Environmental	Open in IMG/M
3300005612	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006056	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 1A DNA	Engineered	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007545	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3	Environmental	Open in IMG/M
3300007551	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-3	Environmental	Open in IMG/M
3300007554	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709	Environmental	Open in IMG/M
3300007555	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555	Environmental	Open in IMG/M
3300007642	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3	Environmental	Open in IMG/M
3300007644	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02	Environmental	Open in IMG/M
3300007655	Estuarine microbial communities from the Columbia River estuary - High salinity metaG S.579	Environmental	Open in IMG/M
3300007658	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-3	Environmental	Open in IMG/M
3300007661	Estuarine microbial communities from the Columbia River estuary - metaG 1546A-3	Environmental	Open in IMG/M
3300007667	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3	Environmental	Open in IMG/M
3300007692	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743	Environmental	Open in IMG/M
3300007706	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-3	Environmental	Open in IMG/M
3300007715	Estuarine microbial communities from the Columbia River estuary - metaG S.751	Environmental	Open in IMG/M
3300007725	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG	Environmental	Open in IMG/M
3300007860	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372A_3um	Environmental	Open in IMG/M
3300007864	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461B_3.0um	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008958	Marine microbial communities from eastern North Pacific Ocean - P1 particle-associated	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009138	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_D2_MG	Environmental	Open in IMG/M
3300009141	Estuarine microbial communities from the Columbia River estuary - metaG 1550A-3	Environmental	Open in IMG/M
3300009142	Estuarine microbial communities from the Columbia River estuary - metaG 1550B-3	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009257	Microbial communities of water from Amazon river, Brazil - RCM22	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300009543	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009717	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_236_2m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010993	ECM15MPS05_Bassembled -- Sediment microbial communities from coastal marsh in Port Sulphur, LA sequencing method B (2X150bp)	Environmental	Open in IMG/M
3300012523	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300019022	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001390 (ERX1782474-ERR1712194)	Environmental	Open in IMG/M
3300019198	Estuarine microbial communities from the Columbia River estuary - R8.48AS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019704	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLT_0-1_MG	Environmental	Open in IMG/M
3300019706	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_1-2_MG	Environmental	Open in IMG/M
3300019728	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_2-3_MG	Environmental	Open in IMG/M
3300019732	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_0-1_MG	Environmental	Open in IMG/M
3300019735	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLC_1-2_MG	Environmental	Open in IMG/M
3300019739	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLC_8-9_MG	Environmental	Open in IMG/M
3300019741	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_6-7_MG	Environmental	Open in IMG/M
3300019745	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_8-9_MG	Environmental	Open in IMG/M
3300019748	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_4-5_MG	Environmental	Open in IMG/M
3300019750	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States - FLT_6-7_MG	Environmental	Open in IMG/M
3300019754	Microbial mat bacterial communities from the Broadkill River, Lewes, Delaware, United States - BB_7_MG	Environmental	Open in IMG/M
3300019758	Microbial mat bacterial communities from the Broadkill River, Lewes, Delaware, United States - BB_2_MG	Environmental	Open in IMG/M
3300021305	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R868 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022307	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_13	Environmental	Open in IMG/M
3300022913 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_2_MG	Environmental	Open in IMG/M
3300022920 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MG	Environmental	Open in IMG/M
3300023276 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_1_MG	Environmental	Open in IMG/M
3300024057 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_9	Environmental	Open in IMG/M
3300024340 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_5	Environmental	Open in IMG/M
3300025632	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025890	Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)	Environmental	Open in IMG/M
3300026126	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_D2_MG (SPAdes)	Environmental	Open in IMG/M
3300027159	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.573 (SPAdes)	Environmental	Open in IMG/M
3300027188	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709 (SPAdes)	Environmental	Open in IMG/M
3300027189	Estuarine microbial communities from the Columbia River estuary - High salinity metaG S.579 (SPAdes)	Environmental	Open in IMG/M
3300027194	Estuarine microbial communities from the Columbia River estuary - metaG S.751 (SPAdes)	Environmental	Open in IMG/M
3300027196	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545 (SPAdes)	Environmental	Open in IMG/M
3300027197	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743 (SPAdes)	Environmental	Open in IMG/M
3300027210	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3 (SPAdes)	Environmental	Open in IMG/M
3300027216	Estuarine microbial communities from the Columbia River estuary - metaG 1546A-3 (SPAdes)	Environmental	Open in IMG/M
3300027218	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-3 (SPAdes)	Environmental	Open in IMG/M
3300027229	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-3 (SPAdes)	Environmental	Open in IMG/M
3300027236	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-3 (SPAdes)	Environmental	Open in IMG/M
3300027248	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3 (SPAdes)	Environmental	Open in IMG/M
3300027250	Estuarine microbial communities from the Columbia River estuary - metaG 1557A-02 (SPAdes)	Environmental	Open in IMG/M
3300027278	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703 (SPAdes)	Environmental	Open in IMG/M
3300027308	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725 (SPAdes)	Environmental	Open in IMG/M
3300027418	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747 (SPAdes)	Environmental	Open in IMG/M
3300027751	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713 (SPAdes)	Environmental	Open in IMG/M
3300027753	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 (SPAdes)	Environmental	Open in IMG/M
3300027837 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_3	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300028284	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_10	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032136	Coastal sediment microbial communities from Delaware Bay, Delaware, United States - CS-6 worm burrow	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034051	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13May2013-rr0097	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
YBMDRAFT_100780277	3300001373	Marine Estuarine	LKNKDNRDSIQKAKRRNSKIRWEYRQERLKKRFIQLLAKFGVKIAHSNKDDRGDDLYEEFKKFSKK*
B570J29637_10029345	3300002361	Freshwater	SRLPRFWYGWLGRGTLDDLTNQEYEQYLKNKDNKDSIQKAKHRNSKIRWEYRQERLKKRFIQLLAKFGIKIAHVNKDDRGDDLYEEFKKFSKK*
JGI26118J46590_10349313	3300003265	Marine	NEEYEQYLKNKDNKGSIQKAKRRNSKIRWEYRQERLKNRFIQLLAKFGIKITNENKNDDGDDLYEEFKNFSKK*
Ga0070723_106751891	3300005612	Marine Sediment	WLGRGTLDDFTTEEYEQFLKNKDNKDSIQRARRRDSKIRWEYRQERLKKRFIQLLAKFGIKITDVNSGDNGDDLYEEFKKFTKK*
Ga0078893_143491921	3300005837	Marine Surface Water	TLDDLTNEEYEQYLKNKDNKGSIQKAKRRNSKIRWEYRQERLKNRFIQLLAKFGIKITNENKNDDGDDLYEEFKNFSKK*
Ga0075163_118358131	3300006056	Wastewater Effluent	DMTNEEYEQYLKNKENKDLIQKAKRRDSKIRWEYRQERLLKRFVKFLAKFGIKISTGNRNDGEDDLYDEFKKFSKK*
Ga0075481_100272469	3300006868	Aqueous	RFGTIRSAYSRLPRFWYGWLGRGTLDDLTTEEYDQYLKNKDNRDSIQKANRRNSKIRWEYRQERLKKRFIQLVAKFGIKITDVNPDDNGDDLYEEFKKFSKK*
Ga0070748_11591841	3300006920	Aqueous	TLDDLTTEDYVQYLKNKDNKDTIQKAKRRDSKIRWTYRQERLKNRFIQLLAKFGIKINTVNKNDEGDDLYEEFKKFSKK*
Ga0102873_11484281	3300007545	Estuarine	KAKRRNSKIRWEYRQERLKNRFIQLLAKFGIKITQVNKDDKGNDLYEEFKKFSKK*
Ga0102881_11391422	3300007551	Estuarine	GWLGRGTLDDLTTEEYDQYLKNKDNRDSIQKANRRNSKIRWEYRQERLKKRFIQLVAKFGIKITDVNPDDNGDDLYEEFKKFSKK*
Ga0102881_11524782	3300007551	Estuarine	KNKDNKDSIQKAKRRDSKIRWSYRQERLKNRFIQLLAKFGIKINTVSKNDEGDDLYEEFKKFSKK*
Ga0102820_10582214	3300007554	Estuarine	SSKLKKYRFGTIRAAYSKLPRFWYGWLGRGTLDDLTNEEYEDYLKNKDNKDSIQKAKRRNSKIRWEYRQERLKNRFIQLLAKFGIKISGIDKNDRGDDLYDEFKKFSKK*
Ga0102817_11141152	3300007555	Estuarine	LPRLWYGWLGRGTLDDLTTEDYEQYLKNKDNKDSIQKAKRRDSKIRWSYRQERLKNRFIQLLAKFGIKINTVSKNDEGDDLYEEFKKFSKK*
Ga0102876_10867054	3300007642	Estuarine	GTLDDLTTEDYEQYLKNKDNKDSIQKAKRRDSKIRWSYRQERLKNRFIQLLAKFGIKINTVSKNDEGDDLYEEFKKFSKK*
Ga0102876_12089491	3300007642	Estuarine	KKYRFGTIRSAYSRLPRFWYGWLGSGTLDDLTNQEYEQYLKNKDNRDSIQKAKRRNSKIRWEYRQERLKKRFIQLLAKFGIKITYVNKDDRGDDLYEEFKKFSKK*
Ga0102902_10149621	3300007644	Estuarine	DYLKNKDNKDSIQKAKRRNSKIRWEYRQERLKNRFIQLLAKFGIKISGIDKNDRGDDLYDEFKKFSKK*
Ga0102825_10462991	3300007655	Estuarine	KLKKYRFGTIRSAYSKLPRLWYGWLGRGTLDDLTTEDYEQYLKNKDNKDSIQKAKRRDSKIRWSYRQERLKNRFIQLLAKFGIKINTVSKNDEGDDLYEEFKKFSKK*
Ga0102898_11263693	3300007658	Estuarine	NDEYEQYLKNKDNKDSIQKAKRRDSKIRWYYRQERLKKRFVQLLAKFGIKLNATNEDDTGDDLYEEFKKFSKK*
Ga0102866_11636672	3300007661	Estuarine	FWYGWLGRGTLDDLTNEEYEDYLKNKDNKDSIQKAKRRNSKIRWEYRQERLKNRFIQLLAKFGIKISGIDKNDRGDDLYDEFKKFSKK*
Ga0102910_10764901	3300007667	Estuarine	AKRRDSKIRWSYRQERLKNRFIQLLAKFGIKINTVSKNDEGDDLYEEFKKFSKK*
Ga0102910_11462531	3300007667	Estuarine	PRFWYGWLGRGTLDDLTTEEYDQYLKNKDNRDSIQKANRRNSKIRWEYRQERLKKRFIQLVAKFGIKITDVNPDDNGDDLYEEFKKFSKK*
Ga0102823_11878631	3300007692	Estuarine	LPRFWYGWLGRGTLDDLTNQEYEQYLKNKDNRDSIQKAKRRNSKIRWEYRQERLKKRFIQLLAKFGIKITYVNKDDRGDDLYEEFKKFSKK*
Ga0102899_11765952	3300007706	Estuarine	SRLPRFWYGWLGRGTLDDLTNQEYEQYLKNKDNRDSIQKAKRRNSKIRWEYRQERLKKRFIQLLAKFGIKITYVNKDDRGDDLYEEFKKFSKK*
Ga0102827_10673233	3300007715	Estuarine	GTLDDLTTEEYEQYLKNKDNKGSIQKAKRRDSKIRWVYRQERLKNRFIQLLAKFGIKINTVSKNDEGDDLYEEFKKFSKK*
Ga0102951_12345662	3300007725	Water	YSKLPRFWYGWLGRGTLDDLTNEEYEQYLKNKDNKDSIQKAKRRDSKIRWQYRQERLKKRFIQLLAKFGIKLTNANNDDKGDDLYEEFKKFTKK*
Ga0105735_11105553	3300007860	Estuary Water	YGWLGRGTLDDLTNQEYEQYLKNKDNKDSIQKAKHRNSKIRWEYRQERLKKRFIQLLAKFGIKIAHVNKDDRGDDLYEEFKKFSKK*
Ga0105749_10206715	3300007864	Estuary Water	GRGTLDDLTTEEYDQYLKNKDNRDSIQKANRRNSKIRWEYRQERLKKRFIQLVAKFGIKITDVNPDDNGDDLYEEFKKFSKK*
Ga0105749_11876242	3300007864	Estuary Water	LGRGTLDDMTTTDYEKYLKDKDNKESIQKAKRRNSKILWHYRRERLKKRFLQLLAKFGIKFDGLDEDDGDDLLEEFKNFTKK*
Ga0114350_10708461	3300008116	Freshwater, Plankton	AYSKLPRLWYGWLGRGTLDDLTTEDYEQYLKNKDNKDSIQKAKRRDSKIRWAYRQERLKNRFIQLLAKFGIKINTVSKNDEGDDLYEEFKKFSKK*
Ga0104259_10088084	3300008958	Ocean Water	EQYLKNKDNKDSIQKAKRRDSKIRWTYRQERLKNRFIQLLAKFGIKINTVNKNDEGDDLYEEFKKFSKK*
Ga0102963_11666413	3300009001	Pond Water	YSRLPRFWYGWLGRGTLDDLTNEEYEQYLKNKDNRGSIQKAKRRNSKIRWGYRQERLKSRFIQLLAKLGIKITGVNKGDKGDDLYEEFKKFSKK*
Ga0102829_11817641	3300009026	Estuarine	KAKRRNSKIRWEYRQERLKKRFIQLLAKFGIKIADVDNDDRGDDLYEEFKKFSKK*
Ga0102812_108201181	3300009086	Estuarine	EEYEDYLKNKDNKDSIQKAKRRDSKIRWHYRRERLKKRFIQLLAKFGIKFNGINEDDGDDLYQEFKNFTKK*
Ga0102959_11204331	3300009138	Soil	EEYEQYLKNKDNKDSIQRAKRRDSKIRWEYRQERLKKRFIQLFAKFGIKINDVNKDDRGDDLYEEFKKFSKK*
Ga0102884_11598193	3300009141	Estuarine	LTNEEYEDYLKNKDNKDSIQKAKRRNSKIRWEYRQERLKNRFIQLLAKFGIKISGIDKNDRGDDLYDEFKKFSKK*
Ga0102885_11329521	3300009142	Estuarine	RFWYGWLGRGTLDDLTTEEYDQYLKNKDNRDSIQKANRRNSKIRWEYRQERLKKRFIQLVAKFGIKITDVNPDDNGDDLYEEFKKFSKK*
Ga0115028_107215781	3300009179	Wetland	YRFGTIRSAYSKLPRFWYGWLGRGTLDDLTNEEYEDYLKNKDNKDSIQKAKRRNSKIRWEYRKERLKNRFIQLLAKCGIKITQGNNDDKGNDLYEEFKKFSKK*
Ga0115028_108088962	3300009179	Wetland	YLKNKGNKDSIEKAKRRDSKIRWEYRQERLKKRLIKLLAIFGIKIKNSNGNDDGDDLYEEFKKFSKK*
Ga0103869_100708044	3300009257	River Water	KDLIQKAKRRDSKIRWEYRQERLIKRFVKFLAKFGIKISTGNRNDGEDDLYDEFKKFSKK
Ga0115546_10860321	3300009435	Pelagic Marine	LNDLTTEDYEQYLKNKDNKDSIQKAKRRDSKIRWTYRQERLKTRFIQLLAKFGIKINTVNKNDEGDDLYEEFKKFSKK*
Ga0115099_108634692	3300009543	Marine	TIRSAYSRLPRFWYGWLGRGTLDDLTNEEYEQYLKNKDNKGSIQKAKRRNSKIRWEYRQERLKQRLVQLLAKFGIKGAGVNKGDKDDDLYEEFKKFSKK*
Ga0123375_113714	3300009717	Marine	RFGTIRSAYSKLPRLWYGWLGRGTLDDLTTEDYEQYLKNKDNKDSIQKAKHRDSKIRWAYRQERLKNRFIQLLAKFGIKINTVSKNDEGDDLYEEFKKFSKK*
Ga0139329_1002068	3300010993	Sediment	RQASSKLKKYRFGTIRSAYSKLPRLWYGWLGRGTLDDLTTEDYEQYLKDKDNKDSIQKAKRRDSKIRWVYRQERLKNRIIQVLAKFGIKINTVSKNDEGDDLYEEFKKFSKK*
Ga0129350_14227972	3300012523	Aqueous	GTLDDLTTEEYEQYLKNKDNKDSIQKAKRRDSKIRWVYRQERLKNRFIQLLAKFGIKINTVSKNDEGDDLYEEFKKFSKK*
Ga0181407_10938641	3300017753	Seawater	TIRSAYSKLPRFWYGWLGRGTLDDLTNEEYEQYLKNKGNKDSIQKAKRRDSKIRWYYRQERLKKRFIQLLAKFGIKLNATNKDDKGDDLYEEFKKFSKK
Ga0192951_100074167	3300019022	Marine	LNDLTAQEYEEYLKTKENKESIKKAERRNSKIQWYYRQERLKKRFIKILTKFGIKVDNINSEDNDDNLYEEFKKFTKK
Ga0180033_1938332	3300019198	Estuarine	MVWVVRPWTLDDLTTEEYEQYLKNKDNKGSIQKAKRRDSKIRWVYRQERLKNRFIQLLAKFGIKINTVSKND
Ga0193979_10379861	3300019704	Sediment	NKDNRGSIQKAKRRNSKIRWEYRQERLKNRFIQLLAKLGIKITGVNKGDKGDDLYEEFKKFSKK
Ga0193979_10435881	3300019704	Sediment	WLGRGTLDDLTSEEYEQYLKNKDNKDSIQKAKRRDSKIRWEYRQQRLKNRFIQLLAKFGIKINMANKDDKGDDLYEEFKKFSKK
Ga0193995_10141761	3300019706	Sediment	IQKAKRRNSKIRWEYRQERLKNRFIQLLAKLGIKITGVNKGDKGDDLYEEFKKFSKK
Ga0193996_10195041	3300019728	Sediment	QFLKNKDNKDSIRARRRDSKIRWEYRQERLKKRFIQLLAKFGIKITDVNSGDNGDDLYEEFKKFTKK
Ga0194014_10165754	3300019732	Sediment	LGRGTLDDLTSEEYEQYLKNKDNKDSIQKAKRRDSKIRWEYRQQRLKTRFIQLLAKFGIKINTGNNDDRGDDLYEEFKKFSKK
Ga0193990_10535861	3300019735	Sediment	KYRFDTIRSAYSRLPRFWYGWLGRGTLDDLTNEEYEQYLKNKDNRGSIQKAKRRNSKIRWEYRQERLKNRFIQLLAKLGIKITGVNKGDKGDDLYEEFKKFSKK
Ga0194012_10071634	3300019739	Sediment	LWYGWLGRGTLDDLTTEEYEQYLKNKDNKGSIQKAKRRDSKIRWVYRQERLKNRIIQLLAKFGIKITSSSRNDEGDDLYEEFKKFSKK
Ga0194012_10554551	3300019739	Sediment	NSIQKAKRRDSKIRWEYRQQRLQNRFIQLLAKFGIKINVANKDDKGDDLYEEFKKFSKK
Ga0194020_10089731	3300019741	Sediment	QYLKNKDNRGSIQKAKRRNSKIRWEYRQERLKNRFIQLLAKLGIKITGVNKGDKGDDLYEEFKKFSKK
Ga0194002_10203371	3300019745	Sediment	KNKDNTNSIQRAKRRDSKIRWQYRQERLKNRFIKFLTKFGIKFNGVTKDDKGDDLYEEFKKFSKK
Ga0194018_10056106	3300019748	Sediment	ISRQASSKLGKYRFGTIRSAYSRLPRFWYGWLGRGTLDDLTNEEYEQYLKNKDNKGSIQKAKRRNSKIRWEYRQERLKQRLVQLLAKFGIKITDVDKDDRGDDLYEEFKKFSKK
Ga0194000_10735641	3300019750	Sediment	WYGWLGRGTLDDLTSEEYEQYLKNKDNKDSIQKAKRRDSKIRWEYRQQRLKNRFIQLLAKFGIKINMANKDDKGDDLYEEFKKFSKK
Ga0193956_10312891	3300019754	Freshwater Microbial Mat	LDDLTTEEYEQYLKNKDNRDSIQRAKRRDSKIRWQYRRERFKKRFIQLLAKFGVKITDTNIDDTGDDFYEEFKKFTKK
Ga0193951_10702463	3300019758	Freshwater Microbial Mat	SSKLKKYRFGTIRSAYSRLPRFWYGWLGRGTLDDLTNEEYEQYLKNKDNRGSIQKAKRRNSKIRWEYRQERLKNRFIQLLAKLGIKITGVNKGDKGDDLYEEFKKFSKK
Ga0210296_11283552	3300021305	Estuarine	MISRQASSKLRKYRFGTIRSAYSRLPRFWYGWLGRGTLDDLTTEEYDQYLKNKDNRDSIQKANRRNSKIRWEYRQERLKKRFIQLVAKFGIKITDVNPDDNGDDLYEEFKKFSKK
Ga0213859_102931541	3300021364	Seawater	MISRQASSKLRKYRFGTIRSAYSKLPRLWYGWLGRGTLDDLTSEEYEQYLKNKDNKNSIQKAKRRDSKIRWEYRQQRLQNRFIQLLAKFGIKINVANKDDKGDDLYEEFKKFSKK
Ga0213863_100923661	3300021371	Seawater	SKLPRLWYGWLGRGTLDDLTNEEYEQYLKNKGNKDSIEKAKRRDSKIRWEYRQERLKKRLIKLLAIFGIKIKNSNGNDDGDDLYEEFKKFSKK
Ga0213868_107077481	3300021389	Seawater	YLKNKDNKGSIQKAKRRNSKIRWEYRQERLKNRFIQLLAKFGIKITNENKNDDGDDLYEEFKNFSKK
Ga0222718_102213551	3300021958	Estuarine Water	WLGRGTLDDLTSEEYEQYLKNKDNKDSIQKAKRRDSKIRWEYRQQRLKNRFIQLLAKFGIKVNMANKDDKGDDLYEEFKKFSKK
Ga0222716_102231841	3300021959	Estuarine Water	EYEQYLKNKDNKDSIQKAKRRDSKIRWEYRQQRLKNRFIQLLAKFGIKVNMANKDDKGDDLYEEFKKFSKK
Ga0222716_105187461	3300021959	Estuarine Water	AKRRDSKIRWVYRQERLKNRIIQLLAKFGIKITSSNRNNEGDDLYEEFKKFSKK
Ga0222716_107228311	3300021959	Estuarine Water	QASSKLKKYRFGTIRSAYSRLPRFWYGWLGRGTLDDLTNEEYEQYLKNKDNRGSIQKAKRRNSKIRWGYRQERLKSRFIQLLAKLGIKITGVNKGDKGDDLYEEFKKFSKK
Ga0222713_105199573	3300021962	Estuarine Water	KNKDNRGSIQKAKRRNSKIRWGYRQERLKSRFIQLLAKLGIKITGVNKGDKGDDLYEEFKKFSKK
Ga0224507_104550432	3300022307	Sediment	GTLDDLTNEEYEQYLKNKDNKDSIQRAKRRDSKIRWEYRQERLKKRFIQLFAKFGIKINDVNKDDRGDDLYEEFKKFSKK
(restricted) Ga0233404_100886391	3300022913	Seawater	YSRLPRFWYGWLGRGTLDDLTNEEYEQYLKNKDNKGSIQKAKRRNSKIRWEYRQERLKQRLVQLLAKFGIKGAGVNKGDKDDDLYEEFKKFSKK
(restricted) Ga0233426_102552731	3300022920	Seawater	YEQYLKNKDNKASIQKAKRRDSKIRWYYRQQRLKKRFVQLLAKFGIKLNVTNDDDAGDDLYEEFKNFSKK
(restricted) Ga0233410_100887944	3300023276	Seawater	AYSRLPRFWYGWLGRGTLDDLTNEEYEQYLKNKDNKGSIQKAKRRNSKIRWEYRQERLKQRLVQLLAKFGIKGAGVNKGDKDDDLYEEFKKFSKK
(restricted) Ga0255051_101235471	3300024057	Seawater	RLWYGWLGRGTLDDLTTEEYEQYLKNKDNKGSIQKAKRRDSKIRWVYRQERLKNRFIQLLAKFGIKINTVNKNDEGDDLYEEFKKFSKK
(restricted) Ga0255042_100986751	3300024340	Seawater	SIQKAKRRDSKIRWVYRQERLKNRFIQLLAKFGIKINTVSKNDEGDDLYEEFKKFSKK
Ga0209194_11571461	3300025632	Pelagic Marine	YEQYLKNKDNKDSIQKAKRRDSKIRWTYRQERLKTRFIQLLAKFGIKINTVNKNDEGDDLYEEFKKFSKK
Ga0208428_10019731	3300025653	Aqueous	RFGTIRSAYSRLPRFWYGWLGRGTLDDLTTEEYDQYLKNKDNRDSIQKANRRNSKIRWEYRQERLKKRFIQLVAKFGIKITDVNPDDNGDDLYEEFKKFSKK
Ga0209631_101433706	3300025890	Pelagic Marine	LGRGTLDDLTNEEYEQYLKNKDNKDSIQKAKRRDSKIRWEYRQERFKKRFLQLLAKFGIKTDAMNKDNTGDDLYEEFKKFSKK
Ga0209957_10059939	3300026126	Soil	RFGTIRSAYSKLPRLWYGWLGRGTLDDLTNEEYEQYLKNKDNKDSIQRAKRRDSKIRWEYRQERLKKRFIQLFAKFGIKINDVNKDDRGDDLYEEFKKFSKK
Ga0208020_10326414	3300027159	Estuarine	YMISRQASSKLRKYRFGTIRSAYSKLPRFWYGWLGRGTLDDLTNEEYEQYLKNKGNKDSIQKAKRRDSKIRWYYRQERLKKRFIQLLAKFGIKLNATNKDDKGDDLYEEFKKFSKK
Ga0208921_10323343	3300027188	Estuarine	SRLPRFWYGWLGRGTLDDLTNQEYEQYLKNKDNRDSIQKAKRRNSKIRWEYRQERLKNRFIQLLAKFGIKISGIDKNDRGDDLYDEFKKFSKK
Ga0208675_10300062	3300027189	Estuarine	KLKKYRFGTIRSAYSKLPRLWYGWLGRGTLDDLTTEDYEQYLKNKDNKDSIQKAKRRDSKIRWSYRQERLKNRFIQLLAKFGIKINTVSKNDEGDDLYEEFKKFSKK
Ga0208799_10278331	3300027194	Estuarine	TEEYEQYLKNKDNKGSIQKAKRRDSKIRWVYRQERLKNRFIQLLAKFGIKINTVSKNDEGDDLYEEFKKFSKK
Ga0208438_10358963	3300027196	Estuarine	DDLTNQEYEQYLKNKDNRDSIQKAKRRNSKIRWEYRQERLKKRFIQLLTKFGIKITYVNKDDRGDDLYEEFKKFSKK
Ga0208922_10870861	3300027197	Estuarine	RLPRFWYGWLGRGTLDDLTNQEYEQYLKNKDNRDSIQKAKRRNSKIRWEYRQERLKKRFIQLLAKFGIKITYVNKDDRGDDLYEEFKKFSKK
Ga0208802_10231244	3300027210	Estuarine	YEQYLKNKDNKDSIQKAKHRNSKIRWEYRQERLKKRFIQLLAKFGIKIAHVNKDDRGDDLYEEFKKFSKK
Ga0208677_10230841	3300027216	Estuarine	LKNKDNRDSIQKANRRNSKIRWEYRQERLKKRFIQLVAKFGIKITDVNPDDNGDDLYEEFKKFSKK
Ga0208677_10505232	3300027216	Estuarine	FWYGWLGRGTLDDLTNEEYEDYLKNKDNKDSIQKAKRRNSKIRWEYRQERLKNRFIQLLAKFGIKISGIDKNDRGDDLYDEFKKFSKK
Ga0208165_10396551	3300027218	Estuarine	KKYRFGTIRAAYSKLPRFWYGWLGRGTLDDLTNEEYEDYLKNKDNKDSIQKAKRRNSKIRWEYRQERLKNRFIQLLAKFGIKISGIDKNDRGDDLYDEFKKFSKK
Ga0208442_10832322	3300027229	Estuarine	WLGRGTLDDLTTEEYDQYLKNKDNRDSIQKANRRNSKIRWEYRQERLKKRFIQLVAKFGIKITDVNPDDNGDDLYEEFKKFSKK
Ga0208026_10183661	3300027236	Estuarine	RFGTISSAYSRLPRFWYGWLGRGTLDDLTNQEYEQYLKNKDNRDSIQKAKRRNSKIRWEYRQERLKKRFIQLLAKFGIKITYVNKDDRGDDLYEEFKKFSKK
Ga0208176_10495821	3300027248	Estuarine	GWLGRGTLDDMTTTDYEKYLKDKDNKESIQKAKRRNSKILWHYRRERLKKRFLQLLAKFGIKFDGLDEDDGDDLLEEFKNFTKK
Ga0208310_10546601	3300027250	Estuarine	RLPRFWYGWLGRGTLDDLTTEEYDQYLKNKDNRDSIQKANRRNSKIRWEYRQERLKKRFIQLVAKFGIKITDVNPDDNGDDLYEEFKKFSKK
Ga0208439_10407451	3300027278	Estuarine	SKLPRLWYGWLGRGTLDDLTTEDYEQYLKNKDNKDSIQKAKRRDSKIRWSYRQERLKNRFIQLLAKFGIKINTVSKNDEGDDLYEEFKKFSKK
Ga0208796_11221201	3300027308	Estuarine	KRAYIISRQAASKLKKYRFNTIRSAYSKFPRLWYGWLGRGTLDDMTNEEYDHYLKSKENKDLVKKEKRHESKIRWEYRQERLIKRFVKFLAKFGIKITLGKINDDEGDFYEDFKKFSKK
Ga0208022_11175341	3300027418	Estuarine	KLKKYRFGTIRAAYSKLPRFWYGWLGRGTLDDLTNEEYEDYLKNKDNKDSIQKAKRRNSKIRWEYRQERLKNRFIQLLAKFGIKISGIDKNDRGDDLYDEFKKFSKK
Ga0208304_1000589712	3300027751	Estuarine	SIQKAKRRDSKIRWYYRQERLKKRFLGLLAKFGIKISDINIDDSGDDLYEEFKKFTKK
Ga0208305_102713992	3300027753	Estuarine	RNSKIRGEYRKQRLKKRIISLLAIIGIKINNSKNDGDDDLYEEFKNFSKE
(restricted) Ga0255041_100364016	3300027837	Seawater	TLDDLTTEDYEQYLKNKDNKDSTQKAKRRDSKIRWTYRQERLKNRFIQLLAKFGIKINTVSKNDEGDDLYEEFKKFSKK
Ga0209496_105826861	3300027890	Wetland	LGRGTLNDMTQDEYDEYLKTKENKVLIQKAKRRDSKIRWEYRQERLLQRFIKFLAKLGIKVRSVNRANGDDDFYDEFTKFSKK
Ga0209496_105885672	3300027890	Wetland	YLKNKGNKDSIEKAKRRDSKIRWEYRQERLKKRLIKLLAIFGIKIKNSNGNDDGDDLYEEFKKFSKK
Ga0257120_10685671	3300028284	Marine	LDDLTNDEYEQYLKNKDNKDSIQKAKRRDSKIRWYYRQERLKKRFVQLLAKFGIKLNATNEDDTGDDLYEEFKKFSKK
Ga0315899_110034872	3300031784	Freshwater	TIRSAYSRLPRFWYGWLGSGTLDDLTNQEYEQYLKNKDNRDSIQKAKRRNSKIRWEYRQERLKKRFIQLLTKFGIKITSMNKDDRGDDLYEEFKKFSKK
Ga0315315_109272643	3300032073	Seawater	FGTLRHAYSILPRMWYGWLGRGTLDDLTTEEYEKYLKNKANSDSLRRAKQRDSKIRWAYRRERLKKRFINLLAKLGIKIYNSTNDDDGDDLYEEFKNFSKK
Ga0315905_101987911	3300032092	Freshwater	SKLKKYRFGTIRAAYSKLPRFWYGWLGRGTLDDLTNEEYEDYLKNKDNKDSIQKAKRRNSKIRWEYRQERLKNRFIQLLAKFGIKISGIDKNDRGDDLYDEFKKFSKK
Ga0316201_104500171	3300032136	Worm Burrow	IKKAKRRNSKIRWEYRQQRLKKRFSQLLAKFGIKITGVDEDDKGDDLYEEFKKFSKK
Ga0316625_1005185933	3300033418	Soil	DMTNEEYEQYLKNKENKDLIQKAKRRDSKIRWEYRQERLIRRFIKFLAKFGIKISTGNKNNGDDDLYDEFKKFSKK
Ga0316625_1021273163	3300033418	Soil	DNKDSIQKAKRRNSKIRWEYRQERLKNRFIQLLAKFGIKISGIDKNDRGDDLYDEFKKFSKK
Ga0335003_0267021_2_178	3300033995	Freshwater	SIQKAKHRNSKIRWEYRQERLKKRFIQLLAKFGIKIAHVNKDDRGDDLYEEFKKFSKK
Ga0334998_0351075_405_752	3300034019	Freshwater	MISKQASSKLKKYRFGTIRSAYSKLPRFWYGWLGRGTLDDLTNEEYERYLKNKDNKGSIQKAKRRNSKIRWEYRQERLKKRFIQLLAKFGIKISDTGKNNRGDDLYDEFKKFSKK
Ga0335024_0586436_339_533	3300034051	Freshwater	NKDNKGSIQKAKRRNSKIRWEYRQERLKKRFIQLLAKFGVKIAHSNKDDRGDDLYEEFKKFSKK
Ga0335068_0350101_1_204	3300034116	Freshwater	YLKNKDNRDSIQKAKRRNSKIRWEYRQERLKKRFIQLLTKFGLKITYVNKDDRGDDLYEEFKKFSKK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083435

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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