NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300009138

3300009138: Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_D2_MG



Overview

Basic Information
IMG/M Taxon OID3300009138 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0114514 | Gp0125956 | Ga0102959
Sample NameSalt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_D2_MG
Sequencing StatusPermanent Draft
Sequencing CenterDOE Joint Genome Institute (JGI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size465454026
Sequencing Scaffolds92
Novel Protein Genes95
Associated Families76

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Bacteria7
Not Available29
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulfoferrobacter → Desulfoferrobacter suflitae1
All Organisms → cellular organisms → Bacteria → Proteobacteria3
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria11
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → unclassified Desulfosarcina → Desulfosarcina sp.1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Tenericutes → unclassified Mycoplasmatota → Mycoplasmatota bacterium2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Chloroflexaceae → Chloroflexus → Chloroflexus islandicus1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium6
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 11
All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3
All Organisms → Viruses → environmental samples → uncultured virus1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatitalea → Desulfatitalea tepidiphila1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium CG23_combo_of_CG06-09_8_20_14_all_48_271
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Pseudohalioglobus → Pseudohalioglobus sediminis1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → environmental samples → uncultured Woeseiaceae bacterium1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales1
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameSalt Pond Water, Soil And Salt Crust Microbial Communities From South San Francisco Under Conditions Of Wetland Restoration.
TypeEnvironmental
TaxonomyEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil → Salt Pond Water, Soil And Salt Crust Microbial Communities From South San Francisco Under Conditions Of Wetland Restoration.

Alternative Ecosystem Assignments
Environment Ontology (ENVO)terrestrial biomewetland areasoil
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Soil (non-saline)

Location Information
LocationSouth San Francisco, USA
CoordinatesLat. (o)37.4972Long. (o)-122.1293Alt. (m)N/ADepth (m)0
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F004052Metagenome / Metatranscriptome455Y
F005564Metagenome / Metatranscriptome396Y
F005815Metagenome / Metatranscriptome389Y
F011354Metagenome / Metatranscriptome292Y
F012874Metagenome / Metatranscriptome276Y
F015411Metagenome255Y
F018541Metagenome / Metatranscriptome234Y
F021303Metagenome / Metatranscriptome219Y
F023595Metagenome / Metatranscriptome209Y
F023596Metagenome209Y
F024001Metagenome / Metatranscriptome208Y
F024678Metagenome / Metatranscriptome205Y
F024682Metagenome / Metatranscriptome205Y
F029446Metagenome / Metatranscriptome188Y
F030933Metagenome / Metatranscriptome184Y
F033045Metagenome / Metatranscriptome178Y
F037490Metagenome / Metatranscriptome168Y
F038247Metagenome / Metatranscriptome166Y
F040630Metagenome161Y
F040632Metagenome / Metatranscriptome161Y
F042358Metagenome / Metatranscriptome158Y
F042907Metagenome / Metatranscriptome157Y
F044506Metagenome / Metatranscriptome154Y
F044508Metagenome / Metatranscriptome154Y
F045765Metagenome / Metatranscriptome152N
F045768Metagenome / Metatranscriptome152Y
F046383Metagenome / Metatranscriptome151Y
F047065Metagenome / Metatranscriptome150Y
F048318Metagenome / Metatranscriptome148Y
F049002Metagenome / Metatranscriptome147Y
F050381Metagenome / Metatranscriptome145Y
F054044Metagenome / Metatranscriptome140Y
F054047Metagenome / Metatranscriptome140Y
F054878Metagenome139N
F056354Metagenome137N
F056621Metagenome137Y
F058158Metagenome / Metatranscriptome135Y
F059980Metagenome / Metatranscriptome133Y
F059981Metagenome / Metatranscriptome133Y
F061862Metagenome131Y
F063710Metagenome129Y
F064730Metagenome128Y
F070127Metagenome / Metatranscriptome123Y
F072360Metagenome / Metatranscriptome121Y
F073153Metagenome120N
F073571Metagenome / Metatranscriptome120N
F074892Metagenome / Metatranscriptome119Y
F077317Metagenome / Metatranscriptome117Y
F078289Metagenome / Metatranscriptome116N
F078733Metagenome116Y
F080060Metagenome / Metatranscriptome115Y
F080061Metagenome115Y
F080659Metagenome115Y
F081352Metagenome / Metatranscriptome114Y
F083435Metagenome / Metatranscriptome113Y
F084253Metagenome112Y
F084254Metagenome / Metatranscriptome112Y
F085722Metagenome111Y
F087207Metagenome / Metatranscriptome110Y
F087211Metagenome110Y
F087950Metagenome / Metatranscriptome110Y
F088283Metagenome / Metatranscriptome109Y
F090406Metagenome108N
F092101Metagenome / Metatranscriptome107N
F094909Metagenome105Y
F095492Metagenome / Metatranscriptome105Y
F097365Metagenome / Metatranscriptome104Y
F099322Metagenome / Metatranscriptome103Y
F100426Metagenome102Y
F102160Metagenome102Y
F103272Metagenome101Y
F103280Metagenome101Y
F104458Metagenome / Metatranscriptome100Y
F105198Metagenome / Metatranscriptome100Y
F105200Metagenome / Metatranscriptome100Y
F105204Metagenome100N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0102959_1002365All Organisms → cellular organisms → Bacteria4263Open in IMG/M
Ga0102959_1003682Not Available3427Open in IMG/M
Ga0102959_1012229All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales2032Open in IMG/M
Ga0102959_1012821All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulfoferrobacter → Desulfoferrobacter suflitae1995Open in IMG/M
Ga0102959_1017239All Organisms → cellular organisms → Bacteria → Proteobacteria1766Open in IMG/M
Ga0102959_1017517Not Available1756Open in IMG/M
Ga0102959_1021191All Organisms → cellular organisms → Bacteria1629Open in IMG/M
Ga0102959_1021695Not Available1613Open in IMG/M
Ga0102959_1025453Not Available1512Open in IMG/M
Ga0102959_1028513All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1445Open in IMG/M
Ga0102959_1030823All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → unclassified Desulfosarcina → Desulfosarcina sp.1400Open in IMG/M
Ga0102959_1034254All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1341Open in IMG/M
Ga0102959_1042567All Organisms → cellular organisms → Bacteria → Terrabacteria group → Tenericutes → unclassified Mycoplasmatota → Mycoplasmatota bacterium1226Open in IMG/M
Ga0102959_1043787All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium1211Open in IMG/M
Ga0102959_1046291All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Chloroflexaceae → Chloroflexus → Chloroflexus islandicus1184Open in IMG/M
Ga0102959_1047951All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1167Open in IMG/M
Ga0102959_1051521All Organisms → cellular organisms → Bacteria → Proteobacteria1134Open in IMG/M
Ga0102959_1056390Not Available1092Open in IMG/M
Ga0102959_1056828Not Available1089Open in IMG/M
Ga0102959_1058396All Organisms → cellular organisms → Bacteria1076Open in IMG/M
Ga0102959_1060258All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1062Open in IMG/M
Ga0102959_1063814All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 11037Open in IMG/M
Ga0102959_1064193All Organisms → cellular organisms → Bacteria1035Open in IMG/M
Ga0102959_1064521All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1033Open in IMG/M
Ga0102959_1067400All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium1014Open in IMG/M
Ga0102959_1069168Not Available1004Open in IMG/M
Ga0102959_1070418All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria996Open in IMG/M
Ga0102959_1076440All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium963Open in IMG/M
Ga0102959_1088312All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus907Open in IMG/M
Ga0102959_1089235All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium903Open in IMG/M
Ga0102959_1090193All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium899Open in IMG/M
Ga0102959_1090353All Organisms → Viruses → environmental samples → uncultured virus898Open in IMG/M
Ga0102959_1094379All Organisms → cellular organisms → Bacteria882Open in IMG/M
Ga0102959_1100361Not Available859Open in IMG/M
Ga0102959_1108596All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatitalea → Desulfatitalea tepidiphila831Open in IMG/M
Ga0102959_1111633Not Available821Open in IMG/M
Ga0102959_1111856Not Available821Open in IMG/M
Ga0102959_1113554All Organisms → cellular organisms → Bacteria816Open in IMG/M
Ga0102959_1113999All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium814Open in IMG/M
Ga0102959_1114442All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium CG23_combo_of_CG06-09_8_20_14_all_48_27813Open in IMG/M
Ga0102959_1128408All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium774Open in IMG/M
Ga0102959_1134088All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria760Open in IMG/M
Ga0102959_1136427Not Available755Open in IMG/M
Ga0102959_1138373Not Available750Open in IMG/M
Ga0102959_1139310All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium748Open in IMG/M
Ga0102959_1150563All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium724Open in IMG/M
Ga0102959_1150760Not Available723Open in IMG/M
Ga0102959_1154426Not Available716Open in IMG/M
Ga0102959_1159579Not Available706Open in IMG/M
Ga0102959_1162074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium702Open in IMG/M
Ga0102959_1162799All Organisms → cellular organisms → Bacteria700Open in IMG/M
Ga0102959_1167195All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria692Open in IMG/M
Ga0102959_1171158All Organisms → cellular organisms → Bacteria → Proteobacteria685Open in IMG/M
Ga0102959_1176405All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium677Open in IMG/M
Ga0102959_1180399All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium670Open in IMG/M
Ga0102959_1183200Not Available666Open in IMG/M
Ga0102959_1190152Not Available656Open in IMG/M
Ga0102959_1192538All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.652Open in IMG/M
Ga0102959_1193540Not Available651Open in IMG/M
Ga0102959_1199324All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.643Open in IMG/M
Ga0102959_1207002All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Pseudohalioglobus → Pseudohalioglobus sediminis633Open in IMG/M
Ga0102959_1215213All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria623Open in IMG/M
Ga0102959_1215370All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium622Open in IMG/M
Ga0102959_1220876All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium616Open in IMG/M
Ga0102959_1228496Not Available607Open in IMG/M
Ga0102959_1228777All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → environmental samples → uncultured Woeseiaceae bacterium607Open in IMG/M
Ga0102959_1229281All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.606Open in IMG/M
Ga0102959_1234400All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria601Open in IMG/M
Ga0102959_1235247All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium600Open in IMG/M
Ga0102959_1236809All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria598Open in IMG/M
Ga0102959_1249069All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium586Open in IMG/M
Ga0102959_1253553All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales582Open in IMG/M
Ga0102959_1253798Not Available581Open in IMG/M
Ga0102959_1260249All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon575Open in IMG/M
Ga0102959_1268637All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria568Open in IMG/M
Ga0102959_1269355All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria567Open in IMG/M
Ga0102959_1278001All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium560Open in IMG/M
Ga0102959_1280764Not Available557Open in IMG/M
Ga0102959_1281448All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria557Open in IMG/M
Ga0102959_1285932Not Available553Open in IMG/M
Ga0102959_1290518Not Available550Open in IMG/M
Ga0102959_1302562All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae541Open in IMG/M
Ga0102959_1302612All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium541Open in IMG/M
Ga0102959_1302912All Organisms → cellular organisms → Bacteria → Terrabacteria group → Tenericutes → unclassified Mycoplasmatota → Mycoplasmatota bacterium540Open in IMG/M
Ga0102959_1305078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium539Open in IMG/M
Ga0102959_1308499Not Available536Open in IMG/M
Ga0102959_1319992Not Available528Open in IMG/M
Ga0102959_1333865Not Available519Open in IMG/M
Ga0102959_1347294Not Available511Open in IMG/M
Ga0102959_1353753Not Available507Open in IMG/M
Ga0102959_1356374Not Available506Open in IMG/M
Ga0102959_1359172All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium504Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0102959_1002365Ga0102959_10023654F045765MKYHSSKGENTTTIKIDDRLYDLLRKFCDKEGRRLKDFVEDALENAIYTEESIKVLNEEIISLKKKEAKYDYAFRRGFQKGFYISFCALHGQILLEPDDEAFEILKNDPYRISKGAQLDLFRSKEI*
Ga0102959_1003682Ga0102959_10036825F047065MTDLINKFSRAAKAVTSSKSHTWECVKKAYADHLSDISTDRLPLDIQIFYDSVKLRVTSAEAFGHIDNDEASYIANDIRYMANVISSGLKNS*
Ga0102959_1012229Ga0102959_10122292F081352MFLADVSLMIRLIRKISTITLACLLVLNLTAGAAVVVEHCPPLLGSSSPMDIDHCDGMLNFAFPMQGCCGECNDIFCDLIKNPLQDANAVNASPFQGSCYPFFLGTVDPIAESGAWVASSAPRYLFFAALAWSQIPLYIENLALII*
Ga0102959_1012821Ga0102959_10128212F054044MISKYYSNSETFSLPADRLGISSSVGILVLGLAITALIFLFLDSSFRSAADQEECLQLVRALGLKSLSLAPSGRPLRNPDAKDPSIDLRFDPRLGRIHLDGADFVLKVSD*
Ga0102959_1017239Ga0102959_10172391F080061MNLKDLFPLFGILNFGHCDLPFDLAQGGELVKPFGIYDLSFEIFIVET*
Ga0102959_1017517Ga0102959_10175172F084254EQRDKLSMQARRIPVFISEPMVIEILAEVIRQSKRHPHADQVASALAMRGLPVAENDVMTVFDHYDIEKKIPGSH*
Ga0102959_1021191Ga0102959_10211912F056621MNDKERFALAERVQKRVQEEHPHFQLIKRKDEIEKQLKK*
Ga0102959_1021695Ga0102959_10216951F054878MTDLLKKFSAAAKTVKSNNNPVRVCVYGAYREHLKDINPDDLPENIQIIYESVQDRLTSARPKGDIGEDEAGYLAKDILHMAEV
Ga0102959_1025453Ga0102959_10254532F054047HHSMWFANVNCGLGSNIGHGLFVGWVEHPDIFCWVSFLYPTYLPAIFLLSAKPNKMAEDRTVP*
Ga0102959_1028513Ga0102959_10285131F103280MKKFVGFLAVSSIWLLPVVLPEIQAQQTATPPSTAALSPGTTIEELKSRRMAIESMTDIDASVKTDSLKNIDGAIAYLELAGSATKETNELSKLIQKA
Ga0102959_1030823Ga0102959_10308231F087950GIMGFGIMQCRINGKIHIDDKIKMVKILLKTNIPSFHHSIIPFPRQIRKP*
Ga0102959_1034254Ga0102959_10342542F033045YMKISELELPQHLYTQTTVDCGATGELINPEELVSWAEQGRGDAIFSLCHTVYERNLASIDAWERDRIQQLEDELMSASKYAKVKHYHTTLEDVAREAEMKRANVKERMVKHQAAIEELVKEAREFISALVAQQDEGDMLTYLLVVAAVVATGYMFFY*
Ga0102959_1042567Ga0102959_10425672F104458MRRGWVVKYEDGTVIKENEMEWKKIPKAGIVKLSLLFDGKRWDLHGKPAYIQKKRASVVPGAAESFTIESRSIGYYEGNKKVWYTVNEFTGQMKMEVQQI*
Ga0102959_1043787Ga0102959_10437872F045765VTYHSSKGENTTRIKIDDKLYDLLRKFCDKEGRRLKDSVEDALENAIYTDESIKILNAEIKSLKKKEAKYDYAFRRGFQKGFYISFCALHGQILLGPDDEEYEILKNDPYRVSKGAQLDLFR*
Ga0102959_1046291Ga0102959_10462912F085722MSSKYIDIGRMKMLRIAFVSVCYALLVIGQIGCSNPHKEAARASTEASKAEASVHNEKAKILEDYRKCLNKNKSNEQACESYKRALDSM*
Ga0102959_1047951Ga0102959_10479511F048318MAYPKRIADSKSKRIHKTLTVYLSTGLVPKTDEEIFVMATVENVSLVITASTTKPDYSDIAYSYELHPSELDCAWQREYTISTVLCGEDVIEDDVLAWGKDEHKVKFDASGPCESIKVGRIFEVETKVLDEDVFGDDEVYLIVEARSALGPDAAGENLVIGKSNIVIGNF*
Ga0102959_1049723Ga0102959_10497232F105200IPFPKKNPGPAPGRHRGPKVPDSFDHELERLLAYTGAPKPEAFVLDVMRSVKREQRFRKLILGVFGLVGAVFGLAGAVMLSGSISRLFTFTVDLPATETMQATLFIVGAAAFYLWFMNDDFSLDS*
Ga0102959_1051521Ga0102959_10515211F059981MDQRTIKCIYCGGIANIKEQNNLKIIACPTCKRETAAQTYQDLFDLWMGDIRDEEP*
Ga0102959_1056390Ga0102959_10563902F047065MTDLLNKFSEAAKVVSSGKTHMWECVNRAYVDHLSDISTDSLPEEIQIFYDSVKLRITSVEAFGHIDNDEACYIANDIMYMADVISSGLRKP*
Ga0102959_1056828Ga0102959_10568282F059981MEREKIICIFCGRIAKIKEQDDLKIVVCPKCKRETELVAYQDIFDQWLGDIRNKDGER*
Ga0102959_1058396Ga0102959_10583962F004052MRILTTIFFLVLTAFLCSCDQQHATPDIDPRLGLECFESRRASLPPGTQYEGIEKLAENVLTIKIMNGVAVETLGCELNPDGTLQSAGK*
Ga0102959_1060258Ga0102959_10602582F040630LNFGHCDLPFDLSQGGGESFDFAQDREPVERLVEPFGICVLLFEIFLLLKPENFIS*
Ga0102959_1063814Ga0102959_10638142F058158VGVTNKDRENRIDKRIVNQKSYMSDFTKTEKEDIDIWELHVKEREYILTQIAKDRRTSKIRTWIELIFMLGFIYYMLYDIYKDGDLDTIIKFLKT*
Ga0102959_1064193Ga0102959_10641932F087950MGFGMMQCWINGPATGGIDDKIKMVNIILKTNIPSFHPSIIPFPGQIQNPKKPPYSQ*
Ga0102959_1064521Ga0102959_10645211F078289MKKTVIILMTLFIVVPLYGFNSLVRHEDIPKMRELGVSQEVIQYFISNQTSSVSSEDVIKMKQSGLKNDDIMSAIKSDLYRPEQKSTSMKEAELIAKLKESGMSDEAVLQFIQTVKSTRRVDSNGNMTQQYTNESQRTQYPTEGATFP
Ga0102959_1067400Ga0102959_10674001F040632VRPIETRAKPVREHIMGNQTNPTRDQQHELEDIRDPRSTPDMVHVVVSTREEELLWAVFDGFSELSSVRVTGCSTLPQTRQICAADPPSYLIIDMALLENEPMDLITLANLSDCRSHIVALTEHPVFEIGARFGKARLTFLQKPVSAHDLLLLLRLRIVDSAEDHAEVC*
Ga0102959_1069168Ga0102959_10691681F072360MNLKPNILKSFSRRTLWIFFILFVSVSFSTSGVIANSCQGGADCLNCAAAAHPHLPGMDVEMVNQGCQSTEQNRSCGFEAGHSADDFDRIATIVTCGTHSYSGIFSIASDESDQAHLHLEFLTQFQYPDRGELTPIFLLNQSLLC*
Ga0102959_1070418Ga0102959_10704182F059980SMGFSGGFEQGKPGTALPELKNVIPVKVKGVNPQNTFYRS*
Ga0102959_1076440Ga0102959_10764401F030933ELRRKRAQAVKTAWVLGTIALLIFATFIGSAIIGR*
Ga0102959_1088312Ga0102959_10883122F042907MTDEMRVEAEEKLFNDLRDEPCILCGDPYLHVLGSYTPEEPKRSKNREDRAPVLYYTLCRTCFNNGRIPTTRIESAYKIKFGKKAA*
Ga0102959_1089235Ga0102959_10892352F087207MIPAALSAAARTNRAGNRGDNNMTRLLTGTILAALLAFQAQADENLTREHIQQVINVTDTATRNRDTAGIGEYLSNDFERIIEFIHDKYLAKVTVDKKKYLELIDEGWPTLEKYEYQRDDTVIHVTPDGSSGQSYSTITETLSLEGTSMVSKFR
Ga0102959_1090193Ga0102959_10901932F087950MMQCWINGPATGGIDDKIKMVNILLKTNIPSFHPSIIPFPGKIRKPQK
Ga0102959_1090353Ga0102959_10903531F024678MESEVLMRIALKLFLFFIGMALSMLGISVAIHSQQHTILGVLILVSGITTIMGSLLSYD*
Ga0102959_1094379Ga0102959_10943791F012874MPAKAGIQKYLKTLDSRLRGNDAKGRFKTFYESINIDDTTLYRYLQDY*
Ga0102959_1100361Ga0102959_11003612F056354MILSVFIALSITAVLITGLAIRGDIPELLGAAVAAIMSIVAGINALDLFVITNSGNVKDIAPQTDIALILLVIFVINLIFIFDRAFSPGE*
Ga0102959_1108596Ga0102959_11085961F044508MVTKTERSDKTEIKKFFLKISGHQQRWPRPFPGAILIPPALLGVAVFGGSSTYCGVD*
Ga0102959_1111633Ga0102959_11116331F074892MAFMMKKYAVIALFGLLLSACSERGENVYRSRAGQDRSNMAIVTLQLDDDVGDVIIRERNLPRSEYGTILLVPGNYVLYERDTASIGITIRPALVNTEQAKANGELILGHTYTLQAGKSKESGKRALWIEDARSGEVFVDRR*
Ga0102959_1111856Ga0102959_11118561F047065MTNLLNKFSEAAKVVSSSKTHMWECVYGAYVDHLSDISTDSLPEEIQIFYDSIKLRITSVEAFGQIDDAEAGYIANDIKYLADFIRSHRGTRP*
Ga0102959_1113554Ga0102959_11135542F059980MEEACSMGFSGGFEQGKPETALPELIRFIPGNVKRVNPQNRFCCG*
Ga0102959_1113999Ga0102959_11139991F097365MVVESNWREMKQQAFEAYRRDGRISVQALEEIVDIGCSDGKFDEDEKVVLINIISNLTRADMSSDMWAKVDELIHKFELADDTEASIEHLEEQ*
Ga0102959_1114442Ga0102959_11144421F054047NIGHGLFVGWVEHPDIFCWVSFLYPTYLPAIFVLSVKPNKMAED*
Ga0102959_1120433Ga0102959_11204331F083435EEYEQYLKNKDNKDSIQRAKRRDSKIRWEYRQERLKKRFIQLFAKFGIKINDVNKDDRGDDLYEEFKKFSKK*
Ga0102959_1128408Ga0102959_11284082F056621EKVQKRVQEKHPHFQLIKRRDEIEKELKVKNENRRS*
Ga0102959_1134088Ga0102959_11340881F044506MMEQWNSGIMGSGMMQCWINGPATGGIDDKIKRVNILLKTNIPSFHPSIIPFPGQIRLPQKNLFILSRL*
Ga0102959_1136427Ga0102959_11364272F050381MKKILVIIAIILIPTIAFANFSIQLDNNTGKKMFYLLYWIDHTYDWPHPFNLAGGELKSSESIDLRSDYRNGKYYVVWSDNGDWQNKVMLNVNDDVKSVIVTPIKSSMTK*
Ga0102959_1138373Ga0102959_11383731F063710MSKSRQRSLRVRVEHEPNRFSDDCLERIYEQLHPTKSRKVTPDKSNKQGEVEPQKGKGGQQ*
Ga0102959_1139310Ga0102959_11393101F099322MARRASKYGDGSVRMVLDGVPLIRYSDGTWCRVAPPSAHDLKDNWYRSSSSLLIRWLDAVGKVKPVKSNE*
Ga0102959_1150563Ga0102959_11505632F078733MLDSRYLLKQAKRTRSLGIQPVSALTHKFGLEIDLTSPEARHPDHKQAFEAKILRKDGINHVEFSKEHPGIIVVEYDPSITTPDAIYLKVKRLNGNIKRKVFL*
Ga0102959_1150760Ga0102959_11507603F054047MAIFLKKIGLGSNIGHGLFVGWVEYSDIFCWVSFVNPTYKPAIFVLSAKPNKISE
Ga0102959_1154426Ga0102959_11544261F061862MKGKLKMQDKETMWYENDAPVQEYLGRELSRKAAGAEKDPKTVRFSWLEIMKKSFLIK*
Ga0102959_1154700Ga0102959_11547002F064730MLFFVIFGDNMVRWIEGSETSYWFWLFSGKGEVLTILGTLTALALFAYWSRIGRVLKASD
Ga0102959_1159579Ga0102959_11595792F018541MRSFWVDFPLSDEQYAKLDLRWRRRDNFYEIKNPPPPDIRLRSFCTFGGEDYKILSLEARGDIDDYHETLKI
Ga0102959_1162074Ga0102959_11620741F094909IEGYVLTRVLILGDFIGTVNRTDLMFDLDTSSDHFRIYEGQRIQALSLPVKSRQLCTLLGEIESHFQRGWILLDAGEWTEADFDEVFELSKQISDEIMTLRADFARNRVHLPSRLQANISDSP*
Ga0102959_1162799Ga0102959_11627991F044508RSDKTEIKKFFLKISGHQQRWSRPLPGAILIPPALLGVADFGESSIY*
Ga0102959_1167195Ga0102959_11671951F040630LFGILNFGHCDLPFDLAQGGGESFDFAQDREPVERLVETFGICVLLFESS*
Ga0102959_1171158Ga0102959_11711581F024001QMFQVKGSRINKITILGVETPVWQGAKTQEYLDIPSFRNAARRDASAYKM*
Ga0102959_1176405Ga0102959_11764052F021303MDVSRSDSSGELIDVQADVLHHAVEFVELVYRQAPATYQRLLKSERFRPQLERGGAFNQGKLYVYAEFSVFRREFLERFPAASPAACINAFSGLFLKNDISIHNLVEFIEGPDDAGQLRLNSPS*
Ga0102959_1180399Ga0102959_11803992F084253IFVRIKAAQGFSARHTPVCRSRKSAENADPGKKGHLWMETG*
Ga0102959_1183200Ga0102959_11832002F005564MIEPSKQQVVTETDMHKVFIGLMVIFFLGDPSLQTLAWLGEMKLYIVAAAIAMVSIPFGVSQLDG*
Ga0102959_1190152Ga0102959_11901522F100426MARNRIIYASQSVWCNGEVLYRVQSLGSTTTFTSEDIFELGHLDIIDVVDDVPAVAVTLNTNDFGDLRTLATLAQLTPAKKVMEDTAIDSTANLVVVSGTNLVETSTFLHGVALAD
Ga0102959_1192538Ga0102959_11925382F037490GSPDRLDAMVWALTDLMLNGYSKPQLQLVYSSSKGLR*
Ga0102959_1193540Ga0102959_11935401F073153EQDLPVRDEIRRIDGNIEGILTRLGNQSETIARIDLLVEEMQEMQTELEHIEVRLNTLKSRID*
Ga0102959_1199324Ga0102959_11993241F042358MALDGPHLDGLIGSAGIMRFDWPEREFYIQHYEGISAAHNVSLAPNGKLALLGNFSQQIVLLDVSNPQAMKLMARQATQYFEECPYRLRANTHHLWYPDNERFIGAIGDNLYRFHVDNLKEPEQLG
Ga0102959_1207002Ga0102959_12070022F090406MKCERNVLWLIVVLAGLADCSTTLTSVDKDGGNVYALPPTVVDQMLKDAMSTEISTGTLRRGSTPYPSYLGEVTWGSLDKDTITVSARPAKGRKLDGTIIDGYVFEVSRKGTAPATGEPTVK
Ga0102959_1215213Ga0102959_12152131F023595MVDFGSEQGLSDFETAGIARYSEDFKRAKTPLWAERCRLWMGTR*
Ga0102959_1215370Ga0102959_12153701F044508VVIRIDRSDKTKIKKIFLKISGHQQRWLRPLPGVILIPPALLVVAD*
Ga0102959_1220876Ga0102959_12208762F038247MKSVFFWSEEEARAHRKNNPEPKGIYLSLRQGEIINRPIQSVLFGFARE*
Ga0102959_1228496Ga0102959_12284962F054044MNCRNFDTLKSLPADRLGISHTIGILMLVFAITALILLFLDASFRSAADQEECLQLVRTLGLNSLSLAPSGRPLRNPGSMDPSIDLRFDPKLGRIHLDGNDLVLKASD*
Ga0102959_1228777Ga0102959_12287771F029446MLIILILLTGIVIGILPGLLKLDKMFSTSNIVIGIIGALVGAFLGFGDLPLFLEYSFLNEHTLMVAVSVLFVSIKILIARKGIAP*
Ga0102959_1229281Ga0102959_12292812F092101LDNLKALRKALPTMDLDELKKVLKDQLETCTKSEYIKLIKKTISWEEAHLDPDLIDQDVLNES*
Ga0102959_1234400Ga0102959_12344002F059980SMGFSGGFEQGKPETALPELIRFIPGNVKRVNPQNRFYCG*
Ga0102959_1235247Ga0102959_12352473F045768MINAGMICCATGVVAQRFIHPPTDFWQGFVAGLSGVLIGLSIVFNMRGLML
Ga0102959_1236809Ga0102959_12368091F005815MTMSVTRLTTYWSIDEAATAIDFLDRLRDALWETYGEQITEMHREAYDNRFQDIN
Ga0102959_1249069Ga0102959_12490691F049002MAKSNYDKAQTDLMQAIKKGEPCTFEEPIPVLVTLDNGVKYEGVAFEVQPPSDNFPKGLVMVRAGNTDIGVPVSYISGR*
Ga0102959_1253553Ga0102959_12535531F088283AGCATDPNITGTYAPSCVAFEGDTIELADGRFTWDKFTDEVSVDKAGNEVEAFPGFPVRGTYTVEDDVVSLVTNVGELAAELYLVHRPGQVYLLTKAEFDAWQSSGTVPDCALLLGAGE*
Ga0102959_1253798Ga0102959_12537982F015411MSRKGYGKKDGSRKGMKKDGRGKNQTSKCRHPKKR*
Ga0102959_1260249Ga0102959_12602491F024682LTPEDELISKLKAEIGKSLPAMFAGMAENMLENNKDVIITWLKDNKDLVKQVIET*
Ga0102959_1268637Ga0102959_12686372F077317MEESLIKSMDETVWYENDQAIKEFLESFRKPAILEADDEPEELSWVKIMGESIQI*
Ga0102959_1269355Ga0102959_12693551F105204RKIGRSLLVAGAVFGALVQVGCKTEGQPSAVVGDYTFSRDFDGQRRVLRIEPSPEQPAECMLTDLPADGGARWKETMLDPAIHRTLIDLLFDEARFPHYEADTTASAVAEKFVCSTRLGESEFCYVPQVVVAGLSSPWRFALQPEVTLSEQSQELIDEFLSAHEACWKMTGGL*
Ga0102959_1278001Ga0102959_12780011F070127FYITAEKKVIFMKPIDFSITINLSLTLKEDKASINIKNVDLTPAVVSLPVSLNSRYGKATSKTKKKTIHDIILQTAKRYVLDSAQNKFTGAKLFNLSLVQHPGLKRNTFAAQVIAAAPNHPSQRHYPNRKDYFNYLGKGYYTLNQKYLEIPADQILPPSDRIREHVKRKYVDPAKTAGKESLSIRA
Ga0102959_1280764Ga0102959_12807643F011354IHLEVDAETRMTSATFTFLTPTDPVDFGALMTRLAAGIEVMIEVEDEDDD*
Ga0102959_1281448Ga0102959_12814481F061862MKGTFKMQDEETIWYENYKPVQEYLDSEFSRKSTVAKKEPKTVRFSWLEIMKKSFHIK*
Ga0102959_1285932Ga0102959_12859321F073571AHPQMVFFRDIGVGRHDLTPQNSTLFLRVKSVVRLDLTEKSSFLDGH*
Ga0102959_1290518Ga0102959_12905181F046383MWGFSMKLSFSSLIQVALLGWMFIPANALACGPEQDGCLGCNDEELPVCLHALIEDVCQSSGNPANCDTARIYDDAERYILTSTGSHMSRIRAMFRSSRKYRLY*
Ga0102959_1302562Ga0102959_13025621F087211VLKVTANAQDADGVDTETRHSLIVFVNCEDKGGAYAPADAHLRQTGWQNVELVNCKAIPPEAIEKLDESLQKAYREAESHNVAAVLLKSS*
Ga0102959_1302612Ga0102959_13026122F073571FFGEVCLCMLRGSLFCAHPQMVFFRDIGVGRHDLTPQNSTLLLRVKSVFRLDLTKKSSFLDGH*
Ga0102959_1302912Ga0102959_13029123F104458MNIRRGWEAEYADGTTINENQIEWKKIPKVGIVRVTLHFDGRRWDIHDKLAYVQKKRASVVPGVPESFRVESRSIGYYEGDKKVWY
Ga0102959_1305078Ga0102959_13050781F080659LDTILDLIMQYRLGIAMMGLAVIAIGLLARPIAPEWSAHNRSALAMMVIGGIVLILLPTLAAAIVGG*
Ga0102959_1308499Ga0102959_13084991F023596MTNKSLQTLVFIGAAVIALIFLKLMFDISKSMTEMTNHVGVMSQDVRKMQDSVRTMNDSIMRMEKSLQGMGQAFNQGSKQFQQMNPAGMMRQVLPDSGQRTR*
Ga0102959_1319992Ga0102959_13199921F095492MVLAAILGPNQALGNNAEAVATKAKLEGLVEAFIARCEAKSALRSSRSEKIRRSAMQSCMKADYCRRYKEELVEGMLENNIEPKV
Ga0102959_1333865Ga0102959_13338651F102160LQQIALYLSKNKFMILSTILFSVMVTVFLAYVCFIWAKYGVQKSISESYYVLPKKENWLFVAFTWLFAFPAMILGNSLLMLFAGGGIVFVGAAAAMHTFPTRAVHLTGAIGGMILACLAMIFQFNMWWLVPAIAAAIGIAALVDKKHLMWWTEVAIFIAISIALGFSIF*
Ga0102959_1347294Ga0102959_13472941F080060MTAQRNDSAARIGAYTLICRFICIVLVAGPLVYFSLVTDGSAAEFLILVLLAPVAGLVLVANSLFCLFRYRKVESFWIGLAFILVGVTGVIEAWYFLPK
Ga0102959_1353753Ga0102959_13537533F103272MNYLTDREKELIKYKKQYLNLVYKITQLQLSGEDPPEELLKKVQKIGCTAKIPEMFLKSILLSLW*
Ga0102959_1356374Ga0102959_13563742F054878MTDLLKKFSAAAETLKANNNPVRVCVYGAYREHLKDINPDDLPENIQIIYESVRDRLASVRPKGDIGEDEAGYLAKDILHMADVVKADYKRP*
Ga0102959_1359172Ga0102959_13591721F105198MKKFLIALGFMLFAGQAPAYFIWGIGEMSCTQLVSAKIEYDHARDQQTHLAQLNWIKGFITGINWSRDSNIARDLTIETVDEWIDGYCRNNLNDTIATASAALVTHLEGDTD*

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