Sample 3300026126

Overview

Basic Information
IMG/M Taxon OID	3300026126 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114514 \| Gp0125954 \| Ga0209957
Sample Name	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_D2_MG (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	208168450
Sequencing Scaffolds	28
Novel Protein Genes	30
Associated Families	25

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1
All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	2
All Organisms → cellular organisms → Bacteria	8
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1
Not Available	6
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium PC51MH44	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Salt Pond Water, Soil And Salt Crust Microbial Communities From South San Francisco Under Conditions Of Wetland Restoration.
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil → Salt Pond Water, Soil And Salt Crust Microbial Communities From South San Francisco Under Conditions Of Wetland Restoration.

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → wetland area → soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	South San Francisco, USA
Coordinates	Lat. (^o)	37.4971	Long. (^o)	-122.129	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F001488	Metagenome / Metatranscriptome	686	Y
F012457	Metagenome	280	Y
F012874	Metagenome / Metatranscriptome	276	Y
F021303	Metagenome / Metatranscriptome	219	Y
F036271	Metagenome	170	N
F042909	Metagenome	157	Y
F044506	Metagenome / Metatranscriptome	154	Y
F045765	Metagenome / Metatranscriptome	152	N
F053306	Metagenome / Metatranscriptome	141	Y
F058158	Metagenome / Metatranscriptome	135	Y
F061862	Metagenome	131	Y
F072360	Metagenome / Metatranscriptome	121	Y
F073570	Metagenome	120	Y
F077987	Metagenome / Metatranscriptome	117	Y
F078730	Metagenome / Metatranscriptome	116	Y
F083435	Metagenome / Metatranscriptome	113	Y
F084253	Metagenome	112	Y
F084254	Metagenome / Metatranscriptome	112	Y
F087950	Metagenome / Metatranscriptome	110	Y
F088283	Metagenome / Metatranscriptome	109	Y
F092074	Metagenome	107	Y
F092076	Metagenome / Metatranscriptome	107	Y
F093888	Metagenome / Metatranscriptome	106	Y
F095489	Metagenome	105	Y
F099324	Metagenome / Metatranscriptome	103	Y

Family

Category

Number of Sequences

3D Structure?

F001488

Metagenome / Metatranscriptome

686

F012457

Metagenome

280

F012874

Metagenome / Metatranscriptome

276

F021303

Metagenome / Metatranscriptome

219

F036271

Metagenome

170

F042909

Metagenome

157

F044506

Metagenome / Metatranscriptome

154

F045765

Metagenome / Metatranscriptome

152

F053306

Metagenome / Metatranscriptome

141

F058158

Metagenome / Metatranscriptome

135

F061862

Metagenome

131

F072360

Metagenome / Metatranscriptome

121

F073570

Metagenome

120

F077987

Metagenome / Metatranscriptome

117

F078730

Metagenome / Metatranscriptome

116

F083435

Metagenome / Metatranscriptome

113

F084253

Metagenome

112

F084254

Metagenome / Metatranscriptome

112

F087950

Metagenome / Metatranscriptome

110

F088283

Metagenome / Metatranscriptome

109

F092074

Metagenome

107

F092076

Metagenome / Metatranscriptome

107

F093888

Metagenome / Metatranscriptome

106

F095489

Metagenome

105

F099324

Metagenome / Metatranscriptome

103

Scaffold	Taxonomy	Length	IMG/M Link
Ga0209957_1003204	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	3714	Open in IMG/M
Ga0209957_1003889	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	3371	Open in IMG/M
Ga0209957_1005695	All Organisms → cellular organisms → Bacteria	2787	Open in IMG/M
Ga0209957_1006329	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	2655	Open in IMG/M
Ga0209957_1006472	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	2625	Open in IMG/M
Ga0209957_1010363	All Organisms → cellular organisms → Bacteria	2044	Open in IMG/M
Ga0209957_1011017	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1975	Open in IMG/M
Ga0209957_1012046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1881	Open in IMG/M
Ga0209957_1013555	All Organisms → cellular organisms → Bacteria	1761	Open in IMG/M
Ga0209957_1015973	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
Ga0209957_1018267	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1484	Open in IMG/M
Ga0209957_1018356	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1481	Open in IMG/M
Ga0209957_1020483	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1389	Open in IMG/M
Ga0209957_1023928	Not Available	1268	Open in IMG/M
Ga0209957_1025593	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
Ga0209957_1032656	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium PC51MH44	1048	Open in IMG/M
Ga0209957_1035844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	989	Open in IMG/M
Ga0209957_1047933	Not Available	825	Open in IMG/M
Ga0209957_1052586	Not Available	780	Open in IMG/M
Ga0209957_1055220	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
Ga0209957_1056318	Not Available	748	Open in IMG/M
Ga0209957_1057255	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
Ga0209957_1070635	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
Ga0209957_1079091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	609	Open in IMG/M
Ga0209957_1096951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium	537	Open in IMG/M
Ga0209957_1099307	Not Available	530	Open in IMG/M
Ga0209957_1100193	Not Available	527	Open in IMG/M
Ga0209957_1101428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	523	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0209957_1003204

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae

3714

Open in IMG/M

Ga0209957_1003889

All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis

3371

Open in IMG/M

Ga0209957_1005695

All Organisms → cellular organisms → Bacteria

2787

Open in IMG/M

Ga0209957_1006329

All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis

2655

Open in IMG/M

Ga0209957_1006472

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter

2625

Open in IMG/M

Ga0209957_1010363

All Organisms → cellular organisms → Bacteria

2044

Open in IMG/M

Ga0209957_1011017

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

1975

Open in IMG/M

Ga0209957_1012046

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria

1881

Open in IMG/M

Ga0209957_1013555

All Organisms → cellular organisms → Bacteria

1761

Open in IMG/M

Ga0209957_1015973

All Organisms → cellular organisms → Bacteria

1605

Open in IMG/M

Ga0209957_1018267

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium

1484

Open in IMG/M

Ga0209957_1018356

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

1481

Open in IMG/M

Ga0209957_1020483

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

1389

Open in IMG/M

Ga0209957_1023928

Not Available

1268

Open in IMG/M

Ga0209957_1025593

All Organisms → cellular organisms → Bacteria

1216

Open in IMG/M

Ga0209957_1032656

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium PC51MH44

1048

Open in IMG/M

Ga0209957_1035844

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium

989

Open in IMG/M

Ga0209957_1047933

Not Available

825

Open in IMG/M

Ga0209957_1052586

Not Available

780

Open in IMG/M

Ga0209957_1055220

All Organisms → cellular organisms → Bacteria

757

Open in IMG/M

Ga0209957_1056318

Not Available

748

Open in IMG/M

Ga0209957_1057255

All Organisms → cellular organisms → Bacteria

741

Open in IMG/M

Ga0209957_1070635

All Organisms → cellular organisms → Bacteria

652

Open in IMG/M

Ga0209957_1079091

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium

609

Open in IMG/M

Ga0209957_1096951

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium

537

Open in IMG/M

Ga0209957_1099307

Not Available

530

Open in IMG/M

Ga0209957_1100193

Not Available

527

Open in IMG/M

Ga0209957_1101428

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium

523

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0209957_1003204	Ga0209957_10032046	F012874	MPVKAGIQNYLKTLDSRLRGNDAKGVFKTFYETINHE
Ga0209957_1003889	Ga0209957_10038892	F044506	MEQWNSGIMGSGMKQCWINGPATGGIDDKLKMVNILLKTNIPAFHPSIIPYPGKIRRPQKTSIF
Ga0209957_1005695	Ga0209957_10056953	F045765	VTYHSSKGENTTRIKIDDKLYDLLRKFCDKEGRRLKDFVEDALENAIYTDESIKILNAEIKSLKKKEAKYDYAFRRGFQKGFYISFCALHGQILLGPDDEEYEILKNDPYRVSKGAQLDLFR
Ga0209957_1005993	Ga0209957_10059939	F083435	RFGTIRSAYSKLPRLWYGWLGRGTLDDLTNEEYEQYLKNKDNKDSIQRAKRRDSKIRWEYRQERLKKRFIQLFAKFGIKINDVNKDDRGDDLYEEFKKFSKK
Ga0209957_1006329	Ga0209957_10063291	F012874	ARNSVMPAKAGIQNYLKTLDSRLRGNDAKGCFKTFYETINC
Ga0209957_1006472	Ga0209957_10064724	F099324	MFKQIIFVIMLGWVLVLSGCAAIDKGHNIEGEDYRGGYSPRGGYTRTTQHKALVSEACNIEANNLAGDKDFMADDRARRVYFSQCMQRNGYNAAGNYVGIPPK
Ga0209957_1010363	Ga0209957_10103633	F077987	MRIDYQCSGGFGGLRLAYTGETDALPAAEAKLLLDLIEAANVFDLNPEQVSQKTRNIPDDFTCRLTLSTAGKKKILSFNELGAPETLRRLSVQLR
Ga0209957_1011017	Ga0209957_10110172	F084254	MVIEILAEVIRQSKRHPRADQVAPALAMRGLPIAEKDVVTIFDQYDIEKKIADSH
Ga0209957_1012046	Ga0209957_10120461	F001488	NLFLHEHLNHILRQIKKQNVKEKQNMARLELTLNFPKSFQIKTFNVKSEKTLSPLAKLILQSVQFKHFYYVRDDISYLLKSNPVERDFLLQALYSTVISLQNNLSINFFDMWVYEIYINKVSTHNKFMNQKSQNLEPDEYITIKLAYGSSVSQEKK
Ga0209957_1013555	Ga0209957_10135551	F093888	MTFNLFKQLSNVTGLPPIISICALVIIFSLILFGILISIKIRNIKKALNKLNDRLDTISQRLGRQPGEFQNIQPHKYKLGSHINNEIATDGRTSLEGSNTANIAQKNGFEEHRINTEISTKIHELLKKSSKPTLYHDLAKQLSKDYPDYNYDFFLKEVEDLQKEGKVEVQLIAGKLNFQIKKT
Ga0209957_1013555	Ga0209957_10135552	F042909	MIELLNFIGSLNLWTFIVIWTSTIFLVIFISLLLFCVSQMNKETIKISQKVKILIEGLSEKKINV
Ga0209957_1015973	Ga0209957_10159732	F092076	MFSHKIDKLQGIIFIRASGTPTTVTMIDHIQRVLNDPDYDPKYNSIIVLEENTHIAGVPTEKIELIRRVLDGYAQQRKGRHWAVVAPNERQEAFLKLNLELISPVKLNIRIFKS
Ga0209957_1018267	Ga0209957_10182673	F058158	MGVTKKDRENIIDKRIVNQKSYMSDFTKTEKDDIDIWELHVKEREYILTQIAKDRRTSKIRTWIELIFMLGFIYYMLYDIYKDGDLDTIIKFLKT
Ga0209957_1018356	Ga0209957_10183563	F087950	MQCWINGPATDGIDDKIKMANILLKTNIPPFHYSISGANS
Ga0209957_1020483	Ga0209957_10204831	F061862	MWYENYEPVQEYLDGELSRKSTDEEKDPKTVRFSWFKIMKKSFHIK
Ga0209957_1023928	Ga0209957_10239283	F093888	MMILFFNQLSNLTGLPLIVSIFAFVVTSSLALFGILILIKVRSIKKGLNDLNDRLDSISQGLSWQSAEAENIQPYKFKLGSHINDELAADGRTNSEINTTADSANKNGPEEHRINMEISKKIHALLKKSGKPTPYHDLTKHLSKDYPKYNYDFFLKEMEDLQKEGKVEVQLIAGKLYFQV
Ga0209957_1025593	Ga0209957_10255931	F084253	KAAQEFAVRRTSVRRSRKPAENAEQDKKGHLWMETN
Ga0209957_1032656	Ga0209957_10326562	F072360	MLLSGMNRKLDILMVFSHKALCIAFTLLITLSLSAGGVLANSCQGGPDCINCATAVHPHIPGMDMEMVNQGCQSAEQNSSCGIKSSTSADVFYSMAAVVKSCTQPYFGIFTAASDESDQTHLFRKLISQFEYPDRGELTPIYLLNLSLLC
Ga0209957_1035844	Ga0209957_10358442	F021303	MNGQSLTPDDASPRTSVLDHASDFVELVCREAPEEYRRLLTAGRFRAELAQVSVFNHGKLYAYAEFSVFRREFLRRFPDAEAAACINAFSSLLLKNDISITNLVEFMEGPDDRRQLQLNAPA
Ga0209957_1047933	Ga0209957_10479332	F073570	MNEPINHIVGILNTTLHQTFQNRVPVRSLADPQADNKETSHKYIIENNLIVYEKYDRYGKLISRVPWLPKTIDEKV
Ga0209957_1052586	Ga0209957_10525861	F058158	MKEKQKSHKTHFTKTEKDDTDIWDLPVKEREHILTQIAKARRTNRARTWIELIFMLSFIYYMLYDIYKDGDLDTIIKFLKI
Ga0209957_1055220	Ga0209957_10552201	F073570	MNAHINHIVGILNTTLHQMYQNRVPVGSLFDPQVDNKKTSHKYTIENNLFIYEKYDRHGKLISKVPWSQKTIA
Ga0209957_1056318	Ga0209957_10563182	F012457	MMIKDLEISKDLDRDALSAVRGGRNSIEQGGVYAPVANAGGGFSFASPTTIVSVPVNASTAVLNDNDLYLDISSKTANVLGSLGTVVAQ
Ga0209957_1057255	Ga0209957_10572552	F044506	MMEQWNRGIMGSGMMQCWINGSATGGIDDKIKMVNILLKTNIPSFHPSIIPFPGKIRKPQKTSILSVGCRNAETLN
Ga0209957_1070635	Ga0209957_10706351	F078730	MDTSNVIVPNRLTNMQEMEVHVNGPDGANRMFIYSGMAEVELSGGLPHPRWSLEVVCFDVGRNYDVENEEIINIVATSSLAGTRTDGVASFAGWQIFGAAGELDEESGR
Ga0209957_1079091	Ga0209957_10790912	F092074	SVSQSVMFIRQFADTNIMTAPGTRYLSTVIAAGLLLAASLPAQADETATLLCDFEHGQLEFVINYTRGTANDATAIISDKEIIWSPGSDRGGMAVINRYTGIMQLSRGNKEFYGRCNKKP
Ga0209957_1096951	Ga0209957_10969511	F088283	AIAAGCAADTDIAGTYQPSCVAFEGNTIELSENRFTWDKFTDEVRVDDVGDVIDPFPGFPVRGSYNVEDDVLRLTTDVGELAAELHLVRRPDQVYLLTDAEFDAWQNDGTVPNCALLLEAVE
Ga0209957_1099307	Ga0209957_10993071	F036271	MSKAVNIIEVLEKAQQSPASVSKRNKQAIVDAYGRALTMQKVLADFIKVNRQLMIDLSMSENANLLHGKDYSLHVSQKLGAKIDSQLVK
Ga0209957_1100193	Ga0209957_11001931	F095489	MGKDEAAPVSKTRMNTPAHNDVVDWNLVAERRFEDIEELNDLVQGWDFEFHQLKAGRSPAELLQLGRPEFILTRFYFEQPYHQRGCTAQDALTIGLTEEGIEEVTTPDGAVQQDD
Ga0209957_1101428	Ga0209957_11014281	F053306	MQGSVIMRTKLISTLSLALVLSACGQPEPISYESLAWVNNYYVEHPVASMSASAGGWLFRGAREFDSEIRVGFLVPGSMNPDPAKRQAVLNSLCPARSESIWQALPKNNKLIIKVWTEDNKFRDST

Scaffold ID

Protein ID

Family

Sequence

Ga0209957_1003204

Ga0209957_10032046

F012874

MPVKAGIQNYLKTLDSRLRGNDAKGVFKTFYETINHE

Ga0209957_1003889

Ga0209957_10038892

F044506

MEQWNSGIMGSGMKQCWINGPATGGIDDKLKMVNILLKTNIPAFHPSIIPYPGKIRRPQKTSIF

Ga0209957_1005695

Ga0209957_10056953

F045765

VTYHSSKGENTTRIKIDDKLYDLLRKFCDKEGRRLKDFVEDALENAIYTDESIKILNAEIKSLKKKEAKYDYAFRRGFQKGFYISFCALHGQILLGPDDEEYEILKNDPYRVSKGAQLDLFR

Ga0209957_1005993

Ga0209957_10059939

F083435

RFGTIRSAYSKLPRLWYGWLGRGTLDDLTNEEYEQYLKNKDNKDSIQRAKRRDSKIRWEYRQERLKKRFIQLFAKFGIKINDVNKDDRGDDLYEEFKKFSKK

Ga0209957_1006329

Ga0209957_10063291

F012874

ARNSVMPAKAGIQNYLKTLDSRLRGNDAKGCFKTFYETINC

Ga0209957_1006472

Ga0209957_10064724

F099324

MFKQIIFVIMLGWVLVLSGCAAIDKGHNIEGEDYRGGYSPRGGYTRTTQHKALVSEACNIEANNLAGDKDFMADDRARRVYFSQCMQRNGYNAAGNYVGIPPK

Ga0209957_1010363

Ga0209957_10103633

F077987

MRIDYQCSGGFGGLRLAYTGETDALPAAEAKLLLDLIEAANVFDLNPEQVSQKTRNIPDDFTCRLTLSTAGKKKILSFNELGAPETLRRLSVQLR

Ga0209957_1011017

Ga0209957_10110172

F084254

MVIEILAEVIRQSKRHPRADQVAPALAMRGLPIAEKDVVTIFDQYDIEKKIADSH

Ga0209957_1012046

Ga0209957_10120461

F001488

NLFLHEHLNHILRQIKKQNVKEKQNMARLELTLNFPKSFQIKTFNVKSEKTLSPLAKLILQSVQFKHFYYVRDDISYLLKSNPVERDFLLQALYSTVISLQNNLSINFFDMWVYEIYINKVSTHNKFMNQKSQNLEPDEYITIKLAYGSSVSQEKK

Ga0209957_1013555

Ga0209957_10135551

F093888

MTFNLFKQLSNVTGLPPIISICALVIIFSLILFGILISIKIRNIKKALNKLNDRLDTISQRLGRQPGEFQNIQPHKYKLGSHINNEIATDGRTSLEGSNTANIAQKNGFEEHRINTEISTKIHELLKKSSKPTLYHDLAKQLSKDYPDYNYDFFLKEVEDLQKEGKVEVQLIAGKLNFQIKKT

Ga0209957_1013555

Ga0209957_10135552

F042909

MIELLNFIGSLNLWTFIVIWTSTIFLVIFISLLLFCVSQMNKETIKISQKVKILIEGLSEKKINV

Ga0209957_1015973

Ga0209957_10159732

F092076

MFSHKIDKLQGIIFIRASGTPTTVTMIDHIQRVLNDPDYDPKYNSIIVLEENTHIAGVPTEKIELIRRVLDGYAQQRKGRHWAVVAPNERQEAFLKLNLELISPVKLNIRIFKS

Ga0209957_1018267

Ga0209957_10182673

F058158

MGVTKKDRENIIDKRIVNQKSYMSDFTKTEKDDIDIWELHVKEREYILTQIAKDRRTSKIRTWIELIFMLGFIYYMLYDIYKDGDLDTIIKFLKT

Ga0209957_1018356

Ga0209957_10183563

F087950

MQCWINGPATDGIDDKIKMANILLKTNIPPFHYSISGANS

Ga0209957_1020483

Ga0209957_10204831

F061862

MWYENYEPVQEYLDGELSRKSTDEEKDPKTVRFSWFKIMKKSFHIK

Ga0209957_1023928

Ga0209957_10239283

F093888

MMILFFNQLSNLTGLPLIVSIFAFVVTSSLALFGILILIKVRSIKKGLNDLNDRLDSISQGLSWQSAEAENIQPYKFKLGSHINDELAADGRTNSEINTTADSANKNGPEEHRINMEISKKIHALLKKSGKPTPYHDLTKHLSKDYPKYNYDFFLKEMEDLQKEGKVEVQLIAGKLYFQV

Ga0209957_1025593

Ga0209957_10255931

F084253

KAAQEFAVRRTSVRRSRKPAENAEQDKKGHLWMETN

Ga0209957_1032656

Ga0209957_10326562

F072360

MLLSGMNRKLDILMVFSHKALCIAFTLLITLSLSAGGVLANSCQGGPDCINCATAVHPHIPGMDMEMVNQGCQSAEQNSSCGIKSSTSADVFYSMAAVVKSCTQPYFGIFTAASDESDQTHLFRKLISQFEYPDRGELTPIYLLNLSLLC

Ga0209957_1035844

Ga0209957_10358442

F021303

MNGQSLTPDDASPRTSVLDHASDFVELVCREAPEEYRRLLTAGRFRAELAQVSVFNHGKLYAYAEFSVFRREFLRRFPDAEAAACINAFSSLLLKNDISITNLVEFMEGPDDRRQLQLNAPA

Ga0209957_1047933

Ga0209957_10479332

F073570

MNEPINHIVGILNTTLHQTFQNRVPVRSLADPQADNKETSHKYIIENNLIVYEKYDRYGKLISRVPWLPKTIDEKV

Ga0209957_1052586

Ga0209957_10525861

F058158

MKEKQKSHKTHFTKTEKDDTDIWDLPVKEREHILTQIAKARRTNRARTWIELIFMLSFIYYMLYDIYKDGDLDTIIKFLKI

Ga0209957_1055220

Ga0209957_10552201

F073570

MNAHINHIVGILNTTLHQMYQNRVPVGSLFDPQVDNKKTSHKYTIENNLFIYEKYDRHGKLISKVPWSQKTIA

Ga0209957_1056318

Ga0209957_10563182

F012457

MMIKDLEISKDLDRDALSAVRGGRNSIEQGGVYAPVANAGGGFSFASPTTIVSVPVNASTAVLNDNDLYLDISSKTANVLGSLGTVVAQ

Ga0209957_1057255

Ga0209957_10572552

F044506

MMEQWNRGIMGSGMMQCWINGSATGGIDDKIKMVNILLKTNIPSFHPSIIPFPGKIRKPQKTSILSVGCRNAETLN

Ga0209957_1070635

Ga0209957_10706351

F078730

MDTSNVIVPNRLTNMQEMEVHVNGPDGANRMFIYSGMAEVELSGGLPHPRWSLEVVCFDVGRNYDVENEEIINIVATSSLAGTRTDGVASFAGWQIFGAAGELDEESGR

Ga0209957_1079091

Ga0209957_10790912

F092074

SVSQSVMFIRQFADTNIMTAPGTRYLSTVIAAGLLLAASLPAQADETATLLCDFEHGQLEFVINYTRGTANDATAIISDKEIIWSPGSDRGGMAVINRYTGIMQLSRGNKEFYGRCNKKP

Ga0209957_1096951

Ga0209957_10969511

F088283

AIAAGCAADTDIAGTYQPSCVAFEGNTIELSENRFTWDKFTDEVRVDDVGDVIDPFPGFPVRGSYNVEDDVLRLTTDVGELAAELHLVRRPDQVYLLTDAEFDAWQNDGTVPNCALLLEAVE

Ga0209957_1099307

Ga0209957_10993071

F036271

MSKAVNIIEVLEKAQQSPASVSKRNKQAIVDAYGRALTMQKVLADFIKVNRQLMIDLSMSENANLLHGKDYSLHVSQKLGAKIDSQLVK

Ga0209957_1100193

Ga0209957_11001931

F095489

MGKDEAAPVSKTRMNTPAHNDVVDWNLVAERRFEDIEELNDLVQGWDFEFHQLKAGRSPAELLQLGRPEFILTRFYFEQPYHQRGCTAQDALTIGLTEEGIEEVTTPDGAVQQDD

Ga0209957_1101428

Ga0209957_11014281

F053306

MQGSVIMRTKLISTLSLALVLSACGQPEPISYESLAWVNNYYVEHPVASMSASAGGWLFRGAREFDSEIRVGFLVPGSMNPDPAKRQAVLNSLCPARSESIWQALPKNNKLIIKVWTEDNKFRDST

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300026126: Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_D2_MG (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences