Sample 3300019728

Overview

Basic Information
IMG/M Taxon OID	3300019728 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0129088 \| Gp0217662 \| Ga0193996
Sample Name	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_2-3_MG
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	115884482
Sequencing Scaffolds	26
Novel Protein Genes	32
Associated Families	27

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1
Not Available	13
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Sedimenticola → Sedimenticola thiotaurini	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae → unclassified Saprospiraceae → Saprospiraceae bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium SG8_31	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Tateyamaria → unclassified Tateyamaria → Tateyamaria sp. Alg231-49	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Microbial Communities From Sediments And Microbial Mats In Various Locations
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment → Microbial Communities From Sediments And Microbial Mats In Various Locations

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater river biome → river → sediment
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	USA: Delaware
Coordinates	Lat. (^o)	38.7906	Long. (^o)	-75.1638	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F001166	Metagenome / Metatranscriptome	760	Y
F005815	Metagenome / Metatranscriptome	389	Y
F010948	Metagenome / Metatranscriptome	297	Y
F018550	Metagenome / Metatranscriptome	234	Y
F024202	Metagenome	207	Y
F026280	Metagenome / Metatranscriptome	198	Y
F026445	Metagenome / Metatranscriptome	198	Y
F032659	Metagenome / Metatranscriptome	179	Y
F034003	Metagenome	176	Y
F037736	Metagenome / Metatranscriptome	167	Y
F039145	Metagenome / Metatranscriptome	164	Y
F042909	Metagenome	157	Y
F047064	Metagenome / Metatranscriptome	150	Y
F058634	Metagenome / Metatranscriptome	134	Y
F062772	Metagenome	130	Y
F063840	Metagenome / Metatranscriptome	129	Y
F064729	Metagenome	128	Y
F070129	Metagenome	123	N
F071910	Metagenome	121	Y
F074892	Metagenome / Metatranscriptome	119	Y
F076890	Metagenome / Metatranscriptome	117	N
F082520	Metagenome / Metatranscriptome	113	N
F082775	Metagenome / Metatranscriptome	113	Y
F083435	Metagenome / Metatranscriptome	113	Y
F087210	Metagenome / Metatranscriptome	110	Y
F101181	Metagenome	102	Y
F105203	Metagenome	100	N

Family

Category

Number of Sequences

3D Structure?

F001166

Metagenome / Metatranscriptome

760

F005815

Metagenome / Metatranscriptome

389

F010948

Metagenome / Metatranscriptome

297

F018550

Metagenome / Metatranscriptome

234

F024202

Metagenome

207

F026280

Metagenome / Metatranscriptome

198

F026445

Metagenome / Metatranscriptome

198

F032659

Metagenome / Metatranscriptome

179

F034003

Metagenome

176

F037736

Metagenome / Metatranscriptome

167

F039145

Metagenome / Metatranscriptome

164

F042909

Metagenome

157

F047064

Metagenome / Metatranscriptome

150

F058634

Metagenome / Metatranscriptome

134

F062772

Metagenome

130

F063840

Metagenome / Metatranscriptome

129

F064729

Metagenome

128

F070129

Metagenome

123

F071910

Metagenome

121

F074892

Metagenome / Metatranscriptome

119

F076890

Metagenome / Metatranscriptome

117

F082520

Metagenome / Metatranscriptome

113

F082775

Metagenome / Metatranscriptome

113

F083435

Metagenome / Metatranscriptome

113

F087210

Metagenome / Metatranscriptome

110

F101181

Metagenome

102

F105203

Metagenome

100

Scaffold	Taxonomy	Length	IMG/M Link
Ga0193996_1007104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1176	Open in IMG/M
Ga0193996_1007780	Not Available	1137	Open in IMG/M
Ga0193996_1008367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Sedimenticola → Sedimenticola thiotaurini	1106	Open in IMG/M
Ga0193996_1009626	Not Available	1047	Open in IMG/M
Ga0193996_1012326	All Organisms → cellular organisms → Bacteria → Proteobacteria	950	Open in IMG/M
Ga0193996_1014030	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae → unclassified Saprospiraceae → Saprospiraceae bacterium	904	Open in IMG/M
Ga0193996_1024754	Not Available	727	Open in IMG/M
Ga0193996_1026007	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	713	Open in IMG/M
Ga0193996_1026034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	713	Open in IMG/M
Ga0193996_1026136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium SG8_31	712	Open in IMG/M
Ga0193996_1028986	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	685	Open in IMG/M
Ga0193996_1029109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	684	Open in IMG/M
Ga0193996_1030086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae	675	Open in IMG/M
Ga0193996_1035682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Tateyamaria → unclassified Tateyamaria → Tateyamaria sp. Alg231-49	634	Open in IMG/M
Ga0193996_1039735	Not Available	610	Open in IMG/M
Ga0193996_1040050	Not Available	608	Open in IMG/M
Ga0193996_1040468	Not Available	606	Open in IMG/M
Ga0193996_1040627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
Ga0193996_1043313	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	592	Open in IMG/M
Ga0193996_1046166	Not Available	578	Open in IMG/M
Ga0193996_1052097	Not Available	554	Open in IMG/M
Ga0193996_1054356	Not Available	546	Open in IMG/M
Ga0193996_1057509	Not Available	535	Open in IMG/M
Ga0193996_1059322	Not Available	529	Open in IMG/M
Ga0193996_1063708	Not Available	516	Open in IMG/M
Ga0193996_1066795	Not Available	508	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0193996_1007104

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi

1176

Open in IMG/M

Ga0193996_1007780

Not Available

1137

Open in IMG/M

Ga0193996_1008367

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Sedimenticola → Sedimenticola thiotaurini

1106

Open in IMG/M

Ga0193996_1009626

Not Available

1047

Open in IMG/M

Ga0193996_1012326

All Organisms → cellular organisms → Bacteria → Proteobacteria

950

Open in IMG/M

Ga0193996_1014030

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae → unclassified Saprospiraceae → Saprospiraceae bacterium

904

Open in IMG/M

Ga0193996_1024754

Not Available

727

Open in IMG/M

Ga0193996_1026007

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

713

Open in IMG/M

Ga0193996_1026034

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria

713

Open in IMG/M

Ga0193996_1026136

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium SG8_31

712

Open in IMG/M

Ga0193996_1028986

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont

685

Open in IMG/M

Ga0193996_1029109

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria

684

Open in IMG/M

Ga0193996_1030086

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae

675

Open in IMG/M

Ga0193996_1035682

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Tateyamaria → unclassified Tateyamaria → Tateyamaria sp. Alg231-49

634

Open in IMG/M

Ga0193996_1039735

Not Available

610

Open in IMG/M

Ga0193996_1040050

Not Available

608

Open in IMG/M

Ga0193996_1040468

Not Available

606

Open in IMG/M

Ga0193996_1040627

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium

605

Open in IMG/M

Ga0193996_1043313

All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium

592

Open in IMG/M

Ga0193996_1046166

Not Available

578

Open in IMG/M

Ga0193996_1052097

Not Available

554

Open in IMG/M

Ga0193996_1054356

Not Available

546

Open in IMG/M

Ga0193996_1057509

Not Available

535

Open in IMG/M

Ga0193996_1059322

Not Available

529

Open in IMG/M

Ga0193996_1063708

Not Available

516

Open in IMG/M

Ga0193996_1066795

Not Available

508

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0193996_1002833	Ga0193996_10028332	F076890	MLVAMGALGTSACSTLEVDDYCRYSETRSIRTADPESLALVLGVQAGRARQTPFVVIRSLSESAPGTSITLYTTPAAHPMPMGLDESRCARMDWKTYTLAVDPDEWNAFWQDDRNSPFEIGIAFLEDFHPLPLSAFGAVILDTGSADYLVSCGCFWR
Ga0193996_1004373	Ga0193996_10043734	F087210	MRFLMGVLALAGAETALAHTPDTGFLSNFGHQLTSLHHSPAAMLLG
Ga0193996_1007104	Ga0193996_10071041	F026445	ALIRRVETADSINWGCLATGHEAGCPRQLHFTHHDSYSRWVKHFNGTQSVVVIHRVRCLDCGAVFSVQPSFLIRYKRYDTDATEKLMTLLFITEDSYRMAGVSQTLALDDQQAGTWAALEIHQAHAIQPLALWRLVQWLGQLSPAQLNLALGVEPPQIIIEDEKHATECGQKSYIPLVYAPKEALIWWVDYLHSVSEADLTASLERFKAISDRLVDIIGATVDGWEAAQNALQATFEGITLVECHFHALLKLGQHLATYKRQRKQAGQPLSETEEIAIRAAFWRVLKATTPEQYQQALDQLPEAFEQEPLASRKQSLIEKQALFLAWTTDQRLAVVTTALDQCMKFLDRKLENMQTFHSAKSGLATVNAWAITRNCWRFLKGAKRAGLSPL
Ga0193996_1007780	Ga0193996_10077802	F005815	MTMKVTRLTTYWTIDEAATAIEFLDILRDALWETYGAHITEMHREAYDNRFQDINQCELGFDDDLPF
Ga0193996_1008367	Ga0193996_10083671	F062772	GQRHSALCIRFLYHERLSTFVRRNRMNLNGIWSSELGGAYGWEPIGTFFLKDGHLTGGGRNHFSLGTYKTKGDSAVFHIVINQFGKKRALFGQKSEQVRVVVKGKRNDDKIIGEATLPGHVEYGICVRFQRRADLPEEKTH
Ga0193996_1008367	Ga0193996_10083672	F062772	MSLNGIWSCELGGAYGWEAIGTLFLKDGHLQGCGRNHYTLGRYKVKGDGAVFHMELTQYGKKRTLFGHKSEQVCVTVKAKRDGDKIIGEATLPGHKQYGIFVRFQRRADLPEEKTH
Ga0193996_1009626	Ga0193996_10096261	F070129	MQIDMTTEALLCAIKSDVRQRVDDIVDGAEHAAMSLNSEQQVEQLLEVALVRVEEAIAEAARAMAREIHRDWHE
Ga0193996_1012326	Ga0193996_10123261	F082775	EGSVMNEPDILYPAIFVFSMLLIGLVLTMWEFSRLQKRKQQMHEEGGHVANREFHASRDNVPNVSRL
Ga0193996_1014030	Ga0193996_10140303	F010948	MEWVLLGTIVTIIIVGCWLAKSTQDYIDEQNERYRKERDND
Ga0193996_1019504	Ga0193996_10195041	F083435	QFLKNKDNKDSIRARRRDSKIRWEYRQERLKKRFIQLLAKFGIKITDVNSGDNGDDLYEEFKKFTKK
Ga0193996_1024754	Ga0193996_10247541	F034003	MKKRRKRNSTNNKPNQLSFDFNLNIPFELHTPKSEISSLQKRKIDWDRRPIIELVKG
Ga0193996_1026007	Ga0193996_10260071	F058634	MSLTRFTGSVLLTCTAMAVAVTGCGSDQSQSAEGIGSVDMTVTLAQPPSGPNEQIDTVDVSLYCDGVDPVLGVPRPPQSSPETFSINVATSQGPEPYNTIGLLEKQGLPAGNCHFSFAAVSNTGNTQCTGELTVAIATNETTQSEVVLACIHTPRYGGVRTDGTFNQCAEYRQILVTPTTQAIGNLVDVRTEVYDPDGDPVTVGVQAVGACDNVQYVNGDTAASCEAVSG
Ga0193996_1026034	Ga0193996_10260341	F005815	MTMKVTRLTTYWTIDEAATAIDFLDRLRDALWETYGEQIIKMHREAYDNRFQDINQCELGFDDDIPF
Ga0193996_1026136	Ga0193996_10261361	F074892	AVIALFGLLLSACSERGENVYRTWVGPDRSNMAIVTLRLGDDIRDVTIRERVLPRSEYGTILLVPGQYTLYEHDGASIGISIRPMLVNVEKARANGELILGHTYVLHAGKSKETGERALWIEDARSGEVFVDRR
Ga0193996_1028986	Ga0193996_10289862	F037736	LDVLQILWLLANPLWTHDIGESGSKTFTGWLLMGAADANHIWWLNINPPQTDLLLHLNSYRIRHLPFDFLTASEF
Ga0193996_1029109	Ga0193996_10291091	F005815	MTMNVTRLTTYWSIDEAATVIEFLDILRDALWETYGEQITEMHREAYDNRFQDINQCELGFDDDIP
Ga0193996_1030086	Ga0193996_10300861	F063840	MGGYELLDQLSEQFFRPAGGYFANFSSSGGSTSEEIYFQQAVYFSYTWFLPRAL
Ga0193996_1035682	Ga0193996_10356821	F101181	MGMDDTNHVKLIVLVCVIAVLVVGISIGGPKFINTVQMHFGSKGKIELMERCIEMPGCTIGPEDLDFYERYHAIRESDAAQKIKESDTVEQLLEE
Ga0193996_1039735	Ga0193996_10397352	F039145	MKKILISLLVLLPMLAGCGQEGVKAPVELSGFIEELKANGVDGTLILRAPINEDMEYVAEYTIAKYSSTRIISLFKCKDAEKAEANLQEALKNHKLSGQASNGTFIMAATFYPPDEEAVEKIKAIFLAYEFEQ
Ga0193996_1040050	Ga0193996_10400501	F071910	MRPIVVAALIAALLGAFGLALGRSAANAVERAVERHVVGVESALSL
Ga0193996_1040468	Ga0193996_10404681	F071910	MRRIVFAALVVALLGALGLALGLSAADAVNRAVEQRTASVERALSL
Ga0193996_1040627	Ga0193996_10406272	F018550	NSLKRLYDAHAPMQSPVLCVSPKQLLDLNKELLAGNVGITGAILPRDRSIAGIDIDTIVTPFGSIGLMVIDPNIIPANTAFILDFAFIQPVFTNIPGYGTVFVRDIDQDDYARVSKAIYMEMGYDFGPPSYHLKITDVA
Ga0193996_1043313	Ga0193996_10433131	F070129	GLPIESRGELMKGAEAMQYSESTEALLHAIKNDVRSRVDDIVDYAEHAAMTLTSENEVDAVLERALLEVEKTLAEAARAMAREIHRERMY
Ga0193996_1046166	Ga0193996_10461661	F024202	MTKTITYNNKEYKLPFDVALPDNPTAEVEIANRFSGEKT
Ga0193996_1052097	Ga0193996_10520971	F105203	MQQAKHAEQMVNRFRELVEESGDSLSVNHYNELKLIIEAGLDTALLENMARISERLTVLAHDIQHNAD
Ga0193996_1054356	Ga0193996_10543561	F001166	MATELGDNVQVKANLAFMAKVIAIVGTCVWGYSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHIEKFAEQSKADLNHLLEMQDAPITSDHQQFERIRYLEKELDRMRDKLENHLTK
Ga0193996_1054356	Ga0193996_10543562	F082520	MGELLMLFITGGGSTAMGAILKGVFGYIFEAKQNKHDLE
Ga0193996_1057509	Ga0193996_10575092	F042909	MVELLNFIGSLNLWTFIVIWTSTIFLVISISLLLFSVSQMNKETIKISQKVKILIEGLSEKKINA
Ga0193996_1059322	Ga0193996_10593222	F064729	WGGRRAMGDLKEWLKYWRKVISKCSKIHKDSKIHKKAYAELSGYLNSVEECANVGELDATALWAVRFMQRMHELEKEIGLHVLEKRVHSTHKE
Ga0193996_1063708	Ga0193996_10637081	F032659	VLDRWWRRWESKTADFDANQATTGNHRKPDPEPSESKHEEKQFRETVLPSGKIEHETTQGRADVGDVPTAETLGSLARKVLSSSRHAESRELARAVLRLLTPLKKQS
Ga0193996_1066025	Ga0193996_10660251	F026280	MGASFVIALCLFINGQLVEHRIQNSISDCLKHKREAERNIGMDNKKFM
Ga0193996_1066795	Ga0193996_10667951	F047064	METIEIKTVKSWKRDVIKYFEDLEIICNDYNRMFLRYLGKLNRLLHEERIDQTEYDDLKKTLLKASESINNVPRTIQDLK

Scaffold ID

Protein ID

Family

Sequence

Ga0193996_1002833

Ga0193996_10028332

F076890

MLVAMGALGTSACSTLEVDDYCRYSETRSIRTADPESLALVLGVQAGRARQTPFVVIRSLSESAPGTSITLYTTPAAHPMPMGLDESRCARMDWKTYTLAVDPDEWNAFWQDDRNSPFEIGIAFLEDFHPLPLSAFGAVILDTGSADYLVSCGCFWR

Ga0193996_1004373

Ga0193996_10043734

F087210

MRFLMGVLALAGAETALAHTPDTGFLSNFGHQLTSLHHSPAAMLLG

Ga0193996_1007104

Ga0193996_10071041

F026445

ALIRRVETADSINWGCLATGHEAGCPRQLHFTHHDSYSRWVKHFNGTQSVVVIHRVRCLDCGAVFSVQPSFLIRYKRYDTDATEKLMTLLFITEDSYRMAGVSQTLALDDQQAGTWAALEIHQAHAIQPLALWRLVQWLGQLSPAQLNLALGVEPPQIIIEDEKHATECGQKSYIPLVYAPKEALIWWVDYLHSVSEADLTASLERFKAISDRLVDIIGATVDGWEAAQNALQATFEGITLVECHFHALLKLGQHLATYKRQRKQAGQPLSETEEIAIRAAFWRVLKATTPEQYQQALDQLPEAFEQEPLASRKQSLIEKQALFLAWTTDQRLAVVTTALDQCMKFLDRKLENMQTFHSAKSGLATVNAWAITRNCWRFLKGAKRAGLSPL

Ga0193996_1007780

Ga0193996_10077802

F005815

MTMKVTRLTTYWTIDEAATAIEFLDILRDALWETYGAHITEMHREAYDNRFQDINQCELGFDDDLPF

Ga0193996_1008367

Ga0193996_10083671

F062772

GQRHSALCIRFLYHERLSTFVRRNRMNLNGIWSSELGGAYGWEPIGTFFLKDGHLTGGGRNHFSLGTYKTKGDSAVFHIVINQFGKKRALFGQKSEQVRVVVKGKRNDDKIIGEATLPGHVEYGICVRFQRRADLPEEKTH

Ga0193996_1008367

Ga0193996_10083672

F062772

MSLNGIWSCELGGAYGWEAIGTLFLKDGHLQGCGRNHYTLGRYKVKGDGAVFHMELTQYGKKRTLFGHKSEQVCVTVKAKRDGDKIIGEATLPGHKQYGIFVRFQRRADLPEEKTH

Ga0193996_1009626

Ga0193996_10096261

F070129

MQIDMTTEALLCAIKSDVRQRVDDIVDGAEHAAMSLNSEQQVEQLLEVALVRVEEAIAEAARAMAREIHRDWHE

Ga0193996_1012326

Ga0193996_10123261

F082775

EGSVMNEPDILYPAIFVFSMLLIGLVLTMWEFSRLQKRKQQMHEEGGHVANREFHASRDNVPNVSRL

Ga0193996_1014030

Ga0193996_10140303

F010948

MEWVLLGTIVTIIIVGCWLAKSTQDYIDEQNERYRKERDND

Ga0193996_1019504

Ga0193996_10195041

F083435

QFLKNKDNKDSIRARRRDSKIRWEYRQERLKKRFIQLLAKFGIKITDVNSGDNGDDLYEEFKKFTKK

Ga0193996_1024754

Ga0193996_10247541

F034003

MKKRRKRNSTNNKPNQLSFDFNLNIPFELHTPKSEISSLQKRKIDWDRRPIIELVKG

Ga0193996_1026007

Ga0193996_10260071

F058634

MSLTRFTGSVLLTCTAMAVAVTGCGSDQSQSAEGIGSVDMTVTLAQPPSGPNEQIDTVDVSLYCDGVDPVLGVPRPPQSSPETFSINVATSQGPEPYNTIGLLEKQGLPAGNCHFSFAAVSNTGNTQCTGELTVAIATNETTQSEVVLACIHTPRYGGVRTDGTFNQCAEYRQILVTPTTQAIGNLVDVRTEVYDPDGDPVTVGVQAVGACDNVQYVNGDTAASCEAVSG

Ga0193996_1026034

Ga0193996_10260341

F005815

MTMKVTRLTTYWTIDEAATAIDFLDRLRDALWETYGEQIIKMHREAYDNRFQDINQCELGFDDDIPF

Ga0193996_1026136

Ga0193996_10261361

F074892

AVIALFGLLLSACSERGENVYRTWVGPDRSNMAIVTLRLGDDIRDVTIRERVLPRSEYGTILLVPGQYTLYEHDGASIGISIRPMLVNVEKARANGELILGHTYVLHAGKSKETGERALWIEDARSGEVFVDRR

Ga0193996_1028986

Ga0193996_10289862

F037736

LDVLQILWLLANPLWTHDIGESGSKTFTGWLLMGAADANHIWWLNINPPQTDLLLHLNSYRIRHLPFDFLTASEF

Ga0193996_1029109

Ga0193996_10291091

F005815

MTMNVTRLTTYWSIDEAATVIEFLDILRDALWETYGEQITEMHREAYDNRFQDINQCELGFDDDIP

Ga0193996_1030086

Ga0193996_10300861

F063840

MGGYELLDQLSEQFFRPAGGYFANFSSSGGSTSEEIYFQQAVYFSYTWFLPRAL

Ga0193996_1035682

Ga0193996_10356821

F101181

MGMDDTNHVKLIVLVCVIAVLVVGISIGGPKFINTVQMHFGSKGKIELMERCIEMPGCTIGPEDLDFYERYHAIRESDAAQKIKESDTVEQLLEE

Ga0193996_1039735

Ga0193996_10397352

F039145

MKKILISLLVLLPMLAGCGQEGVKAPVELSGFIEELKANGVDGTLILRAPINEDMEYVAEYTIAKYSSTRIISLFKCKDAEKAEANLQEALKNHKLSGQASNGTFIMAATFYPPDEEAVEKIKAIFLAYEFEQ

Ga0193996_1040050

Ga0193996_10400501

F071910

MRPIVVAALIAALLGAFGLALGRSAANAVERAVERHVVGVESALSL

Ga0193996_1040468

Ga0193996_10404681

F071910

MRRIVFAALVVALLGALGLALGLSAADAVNRAVEQRTASVERALSL

Ga0193996_1040627

Ga0193996_10406272

F018550

NSLKRLYDAHAPMQSPVLCVSPKQLLDLNKELLAGNVGITGAILPRDRSIAGIDIDTIVTPFGSIGLMVIDPNIIPANTAFILDFAFIQPVFTNIPGYGTVFVRDIDQDDYARVSKAIYMEMGYDFGPPSYHLKITDVA

Ga0193996_1043313

Ga0193996_10433131

F070129

GLPIESRGELMKGAEAMQYSESTEALLHAIKNDVRSRVDDIVDYAEHAAMTLTSENEVDAVLERALLEVEKTLAEAARAMAREIHRERMY

Ga0193996_1046166

Ga0193996_10461661

F024202

MTKTITYNNKEYKLPFDVALPDNPTAEVEIANRFSGEKT

Ga0193996_1052097

Ga0193996_10520971

F105203

MQQAKHAEQMVNRFRELVEESGDSLSVNHYNELKLIIEAGLDTALLENMARISERLTVLAHDIQHNAD

Ga0193996_1054356

Ga0193996_10543561

F001166

MATELGDNVQVKANLAFMAKVIAIVGTCVWGYSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHIEKFAEQSKADLNHLLEMQDAPITSDHQQFERIRYLEKELDRMRDKLENHLTK

Ga0193996_1054356

Ga0193996_10543562

F082520

MGELLMLFITGGGSTAMGAILKGVFGYIFEAKQNKHDLE

Ga0193996_1057509

Ga0193996_10575092

F042909

MVELLNFIGSLNLWTFIVIWTSTIFLVISISLLLFSVSQMNKETIKISQKVKILIEGLSEKKINA

Ga0193996_1059322

Ga0193996_10593222

F064729

WGGRRAMGDLKEWLKYWRKVISKCSKIHKDSKIHKKAYAELSGYLNSVEECANVGELDATALWAVRFMQRMHELEKEIGLHVLEKRVHSTHKE

Ga0193996_1063708

Ga0193996_10637081

F032659

VLDRWWRRWESKTADFDANQATTGNHRKPDPEPSESKHEEKQFRETVLPSGKIEHETTQGRADVGDVPTAETLGSLARKVLSSSRHAESRELARAVLRLLTPLKKQS

Ga0193996_1066025

Ga0193996_10660251

F026280

MGASFVIALCLFINGQLVEHRIQNSISDCLKHKREAERNIGMDNKKFM

Ga0193996_1066795

Ga0193996_10667951

F047064

METIEIKTVKSWKRDVIKYFEDLEIICNDYNRMFLRYLGKLNRLLHEERIDQTEYDDLKKTLLKASESINNVPRTIQDLK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300019728: Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_2-3_MG

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences