Metagenome / Metatranscriptome Family F048676

Basic Information
Family ID	F048676
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	45 residues
Representative Sequence	RLCGTASDAVDAVKLEIPQGFKLLKFKMSEYLKYIVKLTISKI
Number of Associated Samples	93
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	26.35 %
% of genes near scaffold ends (potentially truncated)	66.89 %
% of genes from short scaffolds (< 2000 bps)	80.41 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Most Common Taxonomy
Group	Bacteria (78.378 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands (34.459 % of family members)
Environment Ontology (ENVO)	Unclassified (48.649 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (44.595 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.93% β-sheet: 0.00% Coil/Unstructured: 45.07%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF00072	Response_reg	4.08
PF08240	ADH_N	2.72
PF13458	Peripla_BP_6	2.04
PF00440	TetR_N	2.04
PF08448	PAS_4	1.36
PF02706	Wzz	1.36
PF00121	TIM	1.36
PF00226	DnaJ	1.36
PF00437	T2SSE	1.36
PF01180	DHO_dh	1.36
PF02470	MlaD	1.36
PF02739	5_3_exonuc_N	1.36
PF03358	FMN_red	1.36
PF08241	Methyltransf_11	1.36
PF13487	HD_5	1.36
PF00155	Aminotran_1_2	1.36
PF08843	AbiEii	1.36
PF13439	Glyco_transf_4	1.36
PF02775	TPP_enzyme_C	1.36
PF17147	PFOR_II	0.68
PF12849	PBP_like_2	0.68
PF13692	Glyco_trans_1_4	0.68
PF01408	GFO_IDH_MocA	0.68
PF03447	NAD_binding_3	0.68
PF03992	ABM	0.68
PF02954	HTH_8	0.68
PF00463	ICL	0.68
PF13280	WYL	0.68
PF06508	QueC	0.68
PF13616	Rotamase_3	0.68
PF02649	GCHY-1	0.68
PF00773	RNB	0.68
PF03734	YkuD	0.68
PF09957	VapB_antitoxin	0.68
PF12850	Metallophos_2	0.68
PF04073	tRNA_edit	0.68
PF00884	Sulfatase	0.68
PF08447	PAS_3	0.68
PF00977	His_biosynth	0.68
PF16925	TetR_C_13	0.68
PF01475	FUR	0.68
PF00266	Aminotran_5	0.68
PF02661	Fic	0.68
PF00589	Phage_integrase	0.68
PF01613	Flavin_Reduct	0.68
PF05157	T2SSE_N	0.68
PF13419	HAD_2	0.68
PF00710	Asparaginase	0.68
PF04976	DmsC	0.68
PF14520	HHH_5	0.68
PF00682	HMGL-like	0.68
PF13602	ADH_zinc_N_2	0.68
PF13660	DUF4147	0.68
PF02771	Acyl-CoA_dh_N	0.68
PF02091	tRNA-synt_2e	0.68
PF00144	Beta-lactamase	0.68
PF02803	Thiolase_C	0.68
PF10881	DUF2726	0.68
PF00158	Sigma54_activat	0.68
PF02321	OEP	0.68
PF01967	MoaC	0.68
PF04715	Anth_synt_I_N	0.68
PF00999	Na_H_Exchanger	0.68
PF02653	BPD_transp_2	0.68
PF01797	Y1_Tnp	0.68
PF05724	TPMT	0.68
PF02021	UPF0102	0.68
PF00497	SBP_bac_3	0.68
PF04199	Cyclase	0.68
PF10589	NADH_4Fe-4S	0.68
PF03266	NTPase_1	0.68
PF12706	Lactamase_B_2	0.68
PF02780	Transketolase_C	0.68
PF03840	SecG	0.68
PF13380	CoA_binding_2	0.68
PF00881	Nitroreductase	0.68
PF13188	PAS_8	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	1.36
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	1.36
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	1.36
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	1.36
COG3206	Exopolysaccharide export protein/domain GumC/Wzc1	Cell wall/membrane/envelope biogenesis [M]	1.36
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.36
COG3524	Capsule polysaccharide export protein KpsE/RkpR	Cell wall/membrane/envelope biogenesis [M]	1.36
COG0252	L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D	Translation, ribosomal structure and biogenesis [J]	1.36
COG3765	LPS O-antigen chain length determinant protein, WzzB/FepE family	Cell wall/membrane/envelope biogenesis [M]	1.36
COG3944	Capsular polysaccharide biosynthesis protein YveK	Cell wall/membrane/envelope biogenesis [M]	1.36
COG0167	Dihydroorotate dehydrogenase	Nucleotide transport and metabolism [F]	1.36
COG0149	Triosephosphate isomerase	Carbohydrate transport and metabolism [G]	1.36
COG0147	Anthranilate/para-aminobenzoate synthases component I	Amino acid transport and metabolism [E]	1.36
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	1.36
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	1.36
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.68
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	0.68
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.68
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.68
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.68
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.68
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.68
COG2224	Isocitrate lyase	Energy production and conversion [C]	0.68
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.68
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.68
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.68
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.68
COG3302	DMSO reductase anchor subunit DmsC	Energy production and conversion [C]	0.68
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.68
COG4776	Exoribonuclease II	Transcription [K]	0.68
COG0557	Exoribonuclease R	Transcription [K]	0.68
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	0.68
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	0.68
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.68
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.68
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.68
COG0315	Molybdenum cofactor biosynthesis enzyme MoaC	Coenzyme transport and metabolism [H]	0.68
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.68
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	0.68
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	0.68
COG1618	Nucleoside-triphosphatase THEP1	Nucleotide transport and metabolism [F]	0.68
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.68
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.68
COG0752	Glycyl-tRNA synthetase, alpha subunit	Translation, ribosomal structure and biogenesis [J]	0.68
COG0780	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamily	Translation, ribosomal structure and biogenesis [J]	0.68
COG0792	Predicted endonuclease distantly related to archaeal Holliday junction resolvase, YraN/UPF0102 family	Replication, recombination and repair [L]	0.68
COG1314	Protein translocase subunit SecG	Intracellular trafficking, secretion, and vesicular transport [U]	0.68
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.68
COG1469	GTP cyclohydrolase FolE2	Coenzyme transport and metabolism [H]	0.68
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	52.03 %
Unclassified	root	N/A	21.62 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.03 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.35 %
Thermodesulfobacteria	phylum	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria	0.68 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.68 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	46.62 %
Unclassified	root	N/A	21.62 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.03 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.35 %
Syntrophia	class	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Syntrophia	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	0.68 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	46.62 %
Unclassified	root	N/A	21.62 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.35 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.35 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.68 %
Syntrophales	order	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Syntrophia → Syntrophales	0.68 %
Spirochaetales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales	0.68 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.68 %

Name	Rank	Taxonomy	Distribution
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	29.05 %
Unclassified	root	N/A	21.62 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	3.38 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.35 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.68 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.68 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.68 %
Spirochaetaceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae	0.68 %
Planctomycetes bacterium DG_23	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium DG_23	0.68 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.68 %
Syntrophales	order	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Syntrophia → Syntrophales	0.68 %

Name	Rank	Taxonomy	Distribution
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	25.00 %
Unclassified	root	N/A	21.62 %
unclassified Desulfobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales	2.70 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.70 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	1.35 %
Alkalispirochaeta	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta	0.68 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.68 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.68 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.68 %
Olavius algarvensis Delta 1 endosymbiont	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	0.68 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.68 %
Planctomycetes bacterium DG_23	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium DG_23	0.68 %
Syntrophales	order	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Syntrophia → Syntrophales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.62 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	9.46 %
Desulfosarcina	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina	4.73 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.70 %
Desulfobacterales bacterium PC51MH44	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium PC51MH44	2.03 %
Nostoc	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	1.35 %
Steroidobacter cummioxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter cummioxidans	0.68 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	0.68 %
Syntrophobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter	0.68 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.68 %
Rhodopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula	0.68 %
Desulfatirhabdium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatirhabdium	0.68 %
Alkalispirochaeta odontotermitis	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	0.68 %
Olavius algarvensis Delta 1 endosymbiont	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	0.68 %
Planctomycetes bacterium DG_23	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium DG_23	0.68 %
Syntrophales	order	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Syntrophia → Syntrophales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.62 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	8.78 %
Desulfosarcina variabilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → Desulfosarcina variabilis	2.70 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.70 %
Desulfobacterales bacterium PC51MH44	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium PC51MH44	2.03 %
unclassified Desulfosarcina	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → unclassified Desulfosarcina	1.35 %
unclassified Nostoc	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc	1.35 %
Desulfobacteraceae bacterium IS3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium IS3	0.68 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.68 %
Syntrophobacter fumaroxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	0.68 %
Desulfatirhabdium butyrativorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatirhabdium → Desulfatirhabdium butyrativorans	0.68 %
Rhodopirellula islandica	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula islandica	0.68 %
Steroidobacter cummioxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter cummioxidans	0.68 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	0.68 %
Alkalispirochaeta odontotermitis	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	0.68 %
Olavius algarvensis Delta 1 endosymbiont	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	0.68 %
Planctomycetes bacterium DG_23	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium DG_23	0.68 %
Syntrophales	order	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Syntrophia → Syntrophales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.62 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	8.78 %
Desulfosarcina variabilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → Desulfosarcina variabilis	2.70 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.70 %
Desulfobacterales bacterium PC51MH44	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium PC51MH44	2.03 %
Desulfosarcina sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → unclassified Desulfosarcina → Desulfosarcina sp.	1.35 %
Nostoc sp. CHAB 5844	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. CHAB 5844	1.35 %
Desulfobacteraceae bacterium IS3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium IS3	0.68 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.68 %
Syntrophobacter fumaroxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	0.68 %
Desulfatirhabdium butyrativorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatirhabdium → Desulfatirhabdium butyrativorans	0.68 %
Rhodopirellula islandica	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula islandica	0.68 %
Steroidobacter cummioxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter cummioxidans	0.68 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	0.68 %
Alkalispirochaeta odontotermitis	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	0.68 %
Olavius algarvensis Delta 1 endosymbiont	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	0.68 %
Planctomycetes bacterium DG_23	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium DG_23	0.68 %
Syntrophales	order	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Syntrophia → Syntrophales	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001371\|BBDRAFT_10344861	All Organisms → cellular organisms → Bacteria	1854	Open in IMG/M
3300001371\|BBDRAFT_10412814	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300002231\|KVRMV2_100163913	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → unclassified Desulfosarcina → Desulfosarcina sp.	913	Open in IMG/M
3300002495\|BRMGV_1025655	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2420	Open in IMG/M
3300003988\|Ga0055475_10053158	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300003988\|Ga0055475_10062425	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatirhabdium → Desulfatirhabdium butyrativorans	1097	Open in IMG/M
3300003988\|Ga0055475_10255477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. CHAB 5844	559	Open in IMG/M
3300003989\|Ga0055473_10201281	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	645	Open in IMG/M
3300003990\|Ga0055455_10237770	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	576	Open in IMG/M
3300004001\|Ga0055450_10010626	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2793	Open in IMG/M
3300004004\|Ga0055451_10200187	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	817	Open in IMG/M
3300004014\|Ga0055456_10315630	Not Available	557	Open in IMG/M
3300004014\|Ga0055456_10341215	Not Available	537	Open in IMG/M
3300004018\|Ga0055452_10060727	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1169	Open in IMG/M
3300004018\|Ga0055452_10209074	Not Available	652	Open in IMG/M
3300004018\|Ga0055452_10344216	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	505	Open in IMG/M
3300004026\|Ga0055443_10030111	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1264	Open in IMG/M
3300004028\|Ga0055447_10260328	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	578	Open in IMG/M
3300004030\|Ga0055444_10018582	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	2009	Open in IMG/M
3300004051\|Ga0055492_10158660	Not Available	543	Open in IMG/M
3300004074\|Ga0055518_10197795	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → Desulfosarcina variabilis	526	Open in IMG/M
3300004075\|Ga0055519_10072540	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	714	Open in IMG/M
3300004077\|Ga0055523_10080126	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → Desulfosarcina variabilis	732	Open in IMG/M
3300004077\|Ga0055523_10151705	Not Available	579	Open in IMG/M
3300004146\|Ga0055495_10062985	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	804	Open in IMG/M
3300004147\|Ga0055515_10020940	All Organisms → cellular organisms → Bacteria → Proteobacteria	1249	Open in IMG/M
3300004330\|Ga0065200_1213744	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1367	Open in IMG/M
3300005215\|Ga0069001_10010405	All Organisms → cellular organisms → Bacteria	1684	Open in IMG/M
3300005215\|Ga0069001_10111219	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	717	Open in IMG/M
3300005215\|Ga0069001_10220510	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → Desulfosarcina variabilis	542	Open in IMG/M
3300005590\|Ga0070727_10038537	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2947	Open in IMG/M
3300005600\|Ga0070726_10034266	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	2947	Open in IMG/M
3300005601\|Ga0070722_10053475	Not Available	1444	Open in IMG/M
3300005832\|Ga0074469_10051526	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → Desulfosarcina variabilis	1598	Open in IMG/M
3300005832\|Ga0074469_10386796	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300005917\|Ga0075115_10117990	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300005917\|Ga0075115_10252371	Not Available	602	Open in IMG/M
3300005919\|Ga0075114_10022475	All Organisms → cellular organisms → Bacteria	2658	Open in IMG/M
3300005920\|Ga0070725_10101905	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1238	Open in IMG/M
3300005920\|Ga0070725_10572218	Not Available	512	Open in IMG/M
3300007896\|Ga0111484_1115263	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	518	Open in IMG/M
3300009033\|Ga0102956_1130482	Not Available	814	Open in IMG/M
3300009033\|Ga0102956_1153473	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	754	Open in IMG/M
3300009033\|Ga0102956_1197784	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	669	Open in IMG/M
3300009033\|Ga0102956_1233302	Not Available	620	Open in IMG/M
3300009033\|Ga0102956_1307020	Not Available	548	Open in IMG/M
3300009035\|Ga0102958_1116490	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300009035\|Ga0102958_1347193	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	525	Open in IMG/M
3300009060\|Ga0102962_1022122	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → unclassified Desulfosarcina → Desulfosarcina sp.	1889	Open in IMG/M
3300009060\|Ga0102962_1038996	Not Available	1372	Open in IMG/M
3300009061\|Ga0102938_10166902	Not Available	1207	Open in IMG/M
3300009127\|Ga0118724_1136216	All Organisms → cellular organisms → Bacteria → Proteobacteria	1329	Open in IMG/M
3300009127\|Ga0118724_1138012	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300009145\|Ga0102961_1043597	Not Available	1041	Open in IMG/M
3300009145\|Ga0102961_1130749	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	661	Open in IMG/M
3300009314\|Ga0117908_1010062	All Organisms → cellular organisms → Bacteria → Proteobacteria	15087	Open in IMG/M
3300009314\|Ga0117908_1010062	All Organisms → cellular organisms → Bacteria → Proteobacteria	15087	Open in IMG/M
3300009314\|Ga0117908_1013821	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	11729	Open in IMG/M
3300009506\|Ga0118657_10001954	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	36878	Open in IMG/M
3300009506\|Ga0118657_10278721	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	7133	Open in IMG/M
3300009506\|Ga0118657_10302503	All Organisms → cellular organisms → Bacteria	2151	Open in IMG/M
3300009506\|Ga0118657_10351759	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300009506\|Ga0118657_12641707	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	563	Open in IMG/M
3300009509\|Ga0123573_10780992	Not Available	896	Open in IMG/M
3300009788\|Ga0114923_10216486	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300010392\|Ga0118731_107784830	Not Available	642	Open in IMG/M
3300010412\|Ga0136852_11468591	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	646	Open in IMG/M
3300010413\|Ga0136851_10009838	All Organisms → cellular organisms → Bacteria	11132	Open in IMG/M
3300010413\|Ga0136851_10628081	Not Available	1062	Open in IMG/M
3300010413\|Ga0136851_10748363	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300010413\|Ga0136851_11072115	All Organisms → cellular organisms → Bacteria → Proteobacteria	782	Open in IMG/M
3300010413\|Ga0136851_11368422	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300010430\|Ga0118733_102584041	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1003	Open in IMG/M
3300014305\|Ga0075349_1111772	Not Available	612	Open in IMG/M
3300019700\|Ga0194006_1049065	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	524	Open in IMG/M
3300019708\|Ga0194016_1040019	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	573	Open in IMG/M
3300019727\|Ga0193976_1033488	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300022217\|Ga0224514_10109880	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	952	Open in IMG/M
3300022218\|Ga0224502_10237588	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium PC51MH44	700	Open in IMG/M
3300022220\|Ga0224513_10014369	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	2897	Open in IMG/M
3300022307\|Ga0224507_10235007	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium PC51MH44	734	Open in IMG/M
3300022860\|Ga0222698_1021950	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300022860\|Ga0222698_1035611	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
(restricted) 3300024528\|Ga0255045_10080266	Not Available	1153	Open in IMG/M
3300025556\|Ga0210120_1026199	Not Available	1134	Open in IMG/M
3300025557\|Ga0210141_1038011	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	920	Open in IMG/M
3300025557\|Ga0210141_1044079	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	850	Open in IMG/M
3300025564\|Ga0210084_1000411	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	8438	Open in IMG/M
3300025564\|Ga0210084_1007207	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2018	Open in IMG/M
3300025565\|Ga0210110_1083631	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300025583\|Ga0210085_1000019	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	83627	Open in IMG/M
3300025583\|Ga0210085_1137149	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	655	Open in IMG/M
3300025599\|Ga0210074_1048477	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300025649\|Ga0208279_1012855	All Organisms → cellular organisms → Bacteria	2957	Open in IMG/M
3300025799\|Ga0210122_1010120	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	2549	Open in IMG/M
3300025799\|Ga0210122_1074030	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	765	Open in IMG/M
3300025799\|Ga0210122_1100569	Not Available	637	Open in IMG/M
3300025801\|Ga0210097_1180267	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	500	Open in IMG/M
3300025802\|Ga0210111_1016178	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1932	Open in IMG/M
3300025813\|Ga0210064_1141612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. CHAB 5844	578	Open in IMG/M
3300025814\|Ga0210101_1059391	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300025817\|Ga0210144_1003392	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	5952	Open in IMG/M
3300025969\|Ga0210080_1016811	Not Available	939	Open in IMG/M
3300025970\|Ga0210081_1071354	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium IS3	512	Open in IMG/M
3300025977\|Ga0210072_1002555	Not Available	1997	Open in IMG/M
3300025983\|Ga0210106_1022643	Not Available	990	Open in IMG/M
3300025983\|Ga0210106_1024240	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	960	Open in IMG/M
3300025983\|Ga0210106_1038066	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	776	Open in IMG/M
3300025984\|Ga0210082_1001323	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	3508	Open in IMG/M
3300025984\|Ga0210082_1010929	Not Available	1370	Open in IMG/M
3300026352\|Ga0210107_1034077	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	778	Open in IMG/M
3300027917\|Ga0209536_100204376	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2480	Open in IMG/M
3300027917\|Ga0209536_100326317	All Organisms → cellular organisms → Bacteria	1920	Open in IMG/M
3300029827\|Ga0134606_10035170	Not Available	1707	Open in IMG/M
3300031256\|Ga0315556_1159458	All Organisms → cellular organisms → Bacteria → Proteobacteria	821	Open in IMG/M
3300031277\|Ga0307425_1063677	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300031277\|Ga0307425_1125921	Not Available	809	Open in IMG/M
3300031371\|Ga0307423_1004409	All Organisms → cellular organisms → Bacteria	7060	Open in IMG/M
3300031371\|Ga0307423_1114612	Not Available	799	Open in IMG/M
3300031552\|Ga0315542_1013948	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	3862	Open in IMG/M
3300031578\|Ga0307376_10276931	Not Available	1126	Open in IMG/M
3300031665\|Ga0316575_10002358	All Organisms → cellular organisms → Bacteria → Proteobacteria	6325	Open in IMG/M
3300031665\|Ga0316575_10008695	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3704	Open in IMG/M
3300031665\|Ga0316575_10077440	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1339	Open in IMG/M
3300031665\|Ga0316575_10130406	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1031	Open in IMG/M
3300031691\|Ga0316579_10250923	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium DG_23	856	Open in IMG/M
3300031691\|Ga0316579_10299446	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300031691\|Ga0316579_10342503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter cummioxidans	723	Open in IMG/M
3300031699\|Ga0315535_1163725	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	795	Open in IMG/M
3300032061\|Ga0315540_10438891	Not Available	518	Open in IMG/M
3300032133\|Ga0316583_10010586	All Organisms → cellular organisms → Bacteria	3326	Open in IMG/M
3300032133\|Ga0316583_10025103	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2129	Open in IMG/M
3300032133\|Ga0316583_10038620	All Organisms → cellular organisms → Bacteria	1692	Open in IMG/M
3300032133\|Ga0316583_10043708	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300032133\|Ga0316583_10065915	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina	1267	Open in IMG/M
3300032133\|Ga0316583_10161627	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula islandica	779	Open in IMG/M
3300032137\|Ga0316585_10299058	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300032168\|Ga0316593_10006038	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	3245	Open in IMG/M
3300032168\|Ga0316593_10138186	Not Available	882	Open in IMG/M
3300032251\|Ga0316198_10147716	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300032252\|Ga0316196_10128464	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1164	Open in IMG/M
3300032258\|Ga0316191_11355802	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium PC51MH44	514	Open in IMG/M
3300032259\|Ga0316190_10120768	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	1833	Open in IMG/M
3300032259\|Ga0316190_10389734	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300032260\|Ga0316192_10217207	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	1326	Open in IMG/M
3300032263\|Ga0316195_10183954	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1096	Open in IMG/M
3300032263\|Ga0316195_10238843	Not Available	955	Open in IMG/M
3300033429\|Ga0316193_10900167	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Syntrophia → Syntrophales	704	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.19%
Host-Associated	Host-Associated	10.81%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	79.73%
Plants	Host-Associated → Plants	10.81%
Terrestrial	Environmental → Terrestrial	9.46%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	66.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.81%
Soil	Environmental → Terrestrial → Soil	9.46%
Sediment	Environmental → Aquatic → Sediment	6.76%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	4.05%
Freshwater	Environmental → Aquatic → Freshwater	2.03%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Marine → Wetlands	37.84%
Coastal	Environmental → Aquatic → Marine → Coastal	14.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.78%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.76%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	4.05%
Oceanic	Environmental → Aquatic → Marine → Oceanic	2.70%
Sediment	Environmental → Aquatic → Marine → Sediment	2.70%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.03%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.68%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.68%
Strait	Environmental → Aquatic → Marine → Strait	0.68%
Clay	Environmental → Terrestrial → Soil → Clay	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	34.46%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	11.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.76%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	5.41%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	4.05%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.38%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	3.38%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.03%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	2.03%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	1.35%
Oil-Contaminated Sediment	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated Sediment	0.68%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.68%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.68%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	34.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	10.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.43%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	4.73%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	4.73%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Sediment	3.38%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	3.38%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	3.38%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	2.70%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	2.70%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	2.70%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	2.70%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	2.03%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	1.35%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine	1.35%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	1.35%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	1.35%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	1.35%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.35%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.68%
Mangrove Soil	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated Sediment → Mangrove Soil	0.68%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	0.68%
Sediment	Environmental → Aquatic → Marine → Unclassified → Unclassified → Sediment	0.68%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.68%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.68%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.68%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.68%
Pond Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Pond Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001371	Baker-B-sed	Environmental	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300002495	454 Fosmid Sequence	Environmental	Open in IMG/M
3300003988	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordB_D2	Environmental	Open in IMG/M
3300003989	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordA_D2	Environmental	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004001	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWC_D1	Environmental	Open in IMG/M
3300004004	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWB_D2	Environmental	Open in IMG/M
3300004014	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D2	Environmental	Open in IMG/M
3300004018	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWC_D2	Environmental	Open in IMG/M
3300004026	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordC_D2	Environmental	Open in IMG/M
3300004028	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordC_D2	Environmental	Open in IMG/M
3300004030	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordA_D2	Environmental	Open in IMG/M
3300004051	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D2	Environmental	Open in IMG/M
3300004074	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D1	Environmental	Open in IMG/M
3300004075	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqB_D1	Environmental	Open in IMG/M
3300004077	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqC_D2	Environmental	Open in IMG/M
3300004146	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D2	Environmental	Open in IMG/M
3300004147	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_CordA_D2	Environmental	Open in IMG/M
3300004330	Marine microbial communities from Galveston Bay (CSEDA13C- fraction 6)	Environmental	Open in IMG/M
3300005215	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Tolay_CordB_D2	Environmental	Open in IMG/M
3300005590	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2	Environmental	Open in IMG/M
3300005600	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.1	Environmental	Open in IMG/M
3300005601	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.1	Environmental	Open in IMG/M
3300005832	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.41_BBB	Environmental	Open in IMG/M
3300005917	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKH	Environmental	Open in IMG/M
3300005919	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKM	Environmental	Open in IMG/M
3300005920	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.2	Environmental	Open in IMG/M
3300007896	Microbial communities from sediment of the River Tyne Estuary, UK ? Live_176d_3	Environmental	Open in IMG/M
3300009033	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_D2_MG	Environmental	Open in IMG/M
3300009035	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_D1_MG	Environmental	Open in IMG/M
3300009060	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_D2_MG	Environmental	Open in IMG/M
3300009061	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_B_D2_MG	Environmental	Open in IMG/M
3300009127	Combined Assembly of Gp0137036, Gp0137038	Environmental	Open in IMG/M
3300009145	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_D1_MG	Environmental	Open in IMG/M
3300009314	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 900m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300009509	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11	Environmental	Open in IMG/M
3300009788	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00157 metaG	Environmental	Open in IMG/M
3300010392	Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385	Environmental	Open in IMG/M
3300010412	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300010430	Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples	Environmental	Open in IMG/M
3300014305	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D1	Environmental	Open in IMG/M
3300019700	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLC_2-3_MG	Environmental	Open in IMG/M
3300019708	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_2-3_MG	Environmental	Open in IMG/M
3300019727	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRT_3-4_MG	Environmental	Open in IMG/M
3300022217	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_24	Environmental	Open in IMG/M
3300022218	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_13	Environmental	Open in IMG/M
3300022220	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_21	Environmental	Open in IMG/M
3300022307	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_13	Environmental	Open in IMG/M
3300022860	Saline water microbial communities from Ace Lake, Antarctica - #1450	Environmental	Open in IMG/M
3300024528 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_23	Environmental	Open in IMG/M
3300025556	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025557	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025564	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025565	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWB_D1 (SPAdes)	Environmental	Open in IMG/M
3300025583	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025599	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025649	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKM (SPAdes)	Environmental	Open in IMG/M
3300025799	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025801	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025802	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025813	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025814	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025817	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025969	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_CordB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025970	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300025977	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025983	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Tolay_CordC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025984	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026352	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300029827	Marine sediment microbial communities from Barataria Bay, New Orleans, USA to study impact of Deep Water Horizon explosion - M1047	Environmental	Open in IMG/M
3300031256	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-10	Environmental	Open in IMG/M
3300031277	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-30	Environmental	Open in IMG/M
3300031371	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-10	Environmental	Open in IMG/M
3300031552	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-20	Environmental	Open in IMG/M
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental	Open in IMG/M
3300031665	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3	Host-Associated	Open in IMG/M
3300031691	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA	Host-Associated	Open in IMG/M
3300031699	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-20	Environmental	Open in IMG/M
3300032061	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-10	Environmental	Open in IMG/M
3300032133	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA	Host-Associated	Open in IMG/M
3300032137	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC	Host-Associated	Open in IMG/M
3300032168	Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032251	Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A anoxic	Environmental	Open in IMG/M
3300032252	Coastal sediment microbial communities from Maine, United States - Eddy sediment 2 cm	Environmental	Open in IMG/M
3300032258	Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2 cm	Environmental	Open in IMG/M
3300032259	Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2	Environmental	Open in IMG/M
3300032260	Coastal sediment microbial communities from Maine, United States - Merrow Island worm burrow	Environmental	Open in IMG/M
3300032263	Coastal sediment microbial communities from Maine, United States - Phippsburg sediment 1	Environmental	Open in IMG/M
3300033429	Coastal sediment microbial communities from Maine, United States - Merrow Island sediment 2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048676

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BBDRAFT_103448611	3300001371	Marine Estuarine	MASDAVGAVKLEIPEGFKFLKFRMSEYLKNIIKLTISKI*
BBDRAFT_104128142	3300001371	Marine Estuarine	DAVDAVKLEIPQGFKLLKFKMSEYLKNIVKLTISKI*
KVRMV2_1001639132	3300002231	Marine Sediment	MSFRYPPEDFGGCGAASDAVDAVKLEIPSGFKILKFKMSEYLKNIVKLTITKI*
BRMGV_10256551	3300002495	Mangrove Soil	AIFKFAVDTRKMLFRYAAYAAASDAVDAVKLEILKGFKLLKSKMTEYLKNIIKLNILKI*
Ga0055475_100531582	3300003988	Natural And Restored Wetlands	MASDAVDAVKLEIPQGFKLLRFKMSKYLKNSIKLTISKI*
Ga0055475_100624253	3300003988	Natural And Restored Wetlands	LCGTASDAVDVVKLEIPQGLKLLKFKMSEYLKDIVKLTISKI*
Ga0055475_102554772	3300003988	Natural And Restored Wetlands	LCGTASDAVDVVKLEIPQGFKLLQFKMSEYLKNIVKLTISKI*
Ga0055473_102012812	3300003989	Natural And Restored Wetlands	YSRLCGTASDAVDVVKLEIPQGLKLLKFKMSEYLKDIVKLTISKI*
Ga0055455_102377702	3300003990	Natural And Restored Wetlands	MRNPALRGKMFFRYSRLCGTVSDTVGTVKLEIPKGFKLLKFKMSEY
Ga0055450_100106263	3300004001	Natural And Restored Wetlands	MASDAVDAVKLEIPQGFKLLRFKMSKYLKNIIKLTISKI*
Ga0055451_102001871	3300004004	Natural And Restored Wetlands	NSRLCGTASDAVDAVKLEILQGYKLLKLKMQEFLKNLLN*
Ga0055456_103156301	3300004014	Natural And Restored Wetlands	GTASDAVDAVKLEIPKGFKLLKFKMSEYLKNMFKLTISKI*
Ga0055456_103412151	3300004014	Natural And Restored Wetlands	YSRLCGTASDTVDAVKLEIPTCPVVLKKRSRKGFKLLKFKTTEYLKNTVKLTISKI*
Ga0055452_100607272	3300004018	Natural And Restored Wetlands	VLFRYSHLCGTASDAIDAVKLESPQGFKLLKFKITEYLKNIVIVTISKI*
Ga0055452_102090742	3300004018	Natural And Restored Wetlands	LCGTASDAVDAVKLEIPQGFKLLQFKMSECLKNIIKLTISKI*
Ga0055452_103442161	3300004018	Natural And Restored Wetlands	TASDEVGAVKLVIPKGFKFLKYRMAKYIESIIKLTISII*
Ga0055443_100301113	3300004026	Natural And Restored Wetlands	YSRLCGTASDAVDGGEIGNPVGFQFLKFRMSEYLKNIVKSTILKI*
Ga0055447_102603281	3300004028	Natural And Restored Wetlands	MPFRYSRLCGTASDAVDAVNLEIPKGFKFLKFKMSEYLKNIVFLTISKI*
Ga0055444_100185821	3300004030	Natural And Restored Wetlands	GTASDTVDAVKLEIPKGFKFLKFKMPECLKHKIKFTISKI*
Ga0055492_101586602	3300004051	Natural And Restored Wetlands	GTASDAVDAVKLEIAGFQIAEIQNEEYLKNIVELTISKI*
Ga0055518_101977951	3300004074	Natural And Restored Wetlands	MSFRYSRLCETASDAVDVVKLQIPQGFKFLKFRMPEYLKNMIQLTILKI*
Ga0055519_100725402	3300004075	Natural And Restored Wetlands	MLFRYSRLCGTASDAVDAVKWEIPQGFKLLKFKMSEYLKNIVNLTISKI*
Ga0055523_100801261	3300004077	Natural And Restored Wetlands	MLFRYSRLCGTSSDAVDAVKLKIPQGLKLLKFKMSGYLRNIVKLTISKI*
Ga0055523_101517051	3300004077	Natural And Restored Wetlands	YSHLCGTASDAIDAVKLESPQGFKLLKFKITEYLKNIIIVTISKI*
Ga0055495_100629852	3300004146	Natural And Restored Wetlands	GTASDAVDAVKLEIPKGFKFLKFKMSEYPKNIFNLSISKI*
Ga0055515_100209401	3300004147	Natural And Restored Wetlands	TDTRKIPFRYSRLCGTESDAVDAVKLEIPKGSKLLEFNISDYLKNIVKLSISKI*
Ga0065200_12137443	3300004330	Sediment	MLFRYSRLCGTASDAVDAVKLEILKGFKLLKLKLTEYLKNIIKLTISKI*
Ga0069001_100104053	3300005215	Natural And Restored Wetlands	FKFATDTRKIPFRYNRLCGRESDAVDAVKLKIPKGSKLLEFKISDYLKNIVKLTISKI*
Ga0069001_101112191	3300005215	Natural And Restored Wetlands	YSRLCGTASDAVDAEIGNPVGFQFLKFRMSEYLKNIVKSTILKI*
Ga0069001_102205101	3300005215	Natural And Restored Wetlands	KMSFRYSRLCETASDAVNAVKLQIPQGFKFLKFRMPEYLKNMIQLTILKI*
Ga0070727_100385373	3300005590	Marine Sediment	MASDAVDAVKLKIPKGFKFLKFKMSERLKNIIKLTILKI*
Ga0070726_100342661	3300005600	Marine Sediment	VDAVKLEIPQGFKLLKFKMSEYLKNIVDLTISGVGEFF*
Ga0070722_100534751	3300005601	Marine Sediment	MLFRYSRLCGTAVDAVGAVKLEIPKGFKFLKFRMAEYLKNIIKLTIS*
Ga0074469_100515262	3300005832	Sediment (Intertidal)	MLVRYSCLCGTASDAVNAVKLEIPQGFKLLKFKMADYIKNIV*
Ga0074469_103867962	3300005832	Sediment (Intertidal)	MLFRYSCLCGTASDAVDVVKLEIPQGFKLLKFKMSEYLKNIVNLTISKI*
Ga0075115_101179901	3300005917	Saline Lake	AADTRKMLFRYSRLCGTASDAVDAVILLRRIKIGNPAGFKLLKFKMSEYLKNIVKLIISKI*
Ga0075115_102523712	3300005917	Saline Lake	GTASDAVDAVKLEIPQGFKLLKFKMPECLKNIVKLTSSKI*
Ga0075114_100224751	3300005919	Saline Lake	KFAADTRKMLFRYSRLCGTASDAVDAVILLRRIKIGNPAGFKLLKFKMSEYLKNIVKLIISKI*
Ga0070725_101019052	3300005920	Marine Sediment	AAREKMLFRYSRLCGTASDAVDAVILLRRKKLEIPQGFKLLKFKMSEYLKISLN*
Ga0070725_105722181	3300005920	Marine Sediment	DAVDAVKLEIPQGFKLLKFKMSEYLKNIVELTISKI*
Ga0111484_11152631	3300007896	Sediment	RLCGTASDAVDAVKLEIPQGFKLLKFKMSEYLKYIVKLTISKI*
Ga0102956_11304822	3300009033	Soil	MLFRYSRLCGTASDAVDVVKLEIPQGLKLLKFKMSEYLKDIVKLTISKI*
Ga0102956_11534731	3300009033	Soil	TASAKVDAVKWEIPQDFKLLKLKMPEYLKNIVKVTISKI*
Ga0102956_11977842	3300009033	Soil	RLCGTASDAVDAVKLEIPKGFKLLKFKTSEYLKNIIK*
Ga0102956_12333021	3300009033	Soil	MLFRYSRLCGTASDAVRRSRLRGDAVKSEIPQGFKLLKLKMSEYIKNIVELTILKI*
Ga0102956_13070202	3300009033	Soil	CGTASDTVAAVKLEIPQGFNLLKFKMSEYLRNIVKLTISKI*
Ga0102958_11164902	3300009035	Soil	RYSLLCGTASDAVDAVKLEIPQGFELLKFKMSEYFKNIVKLTISKI*
Ga0102958_13471932	3300009035	Soil	LCGTASDTIEAVKLEIPQGFKLLKFKMSKYLKNIFKLNISKI*
Ga0102962_10221221	3300009060	Soil	CGTASDAVDAVKLEIPQGFELLKFKMSEYLKNIVKLTISKI*
Ga0102962_10389963	3300009060	Soil	DAVDAVKLEIPQGFKLLKFKMSEYLKNFVKVTILKI*
Ga0102938_101669021	3300009061	Pond Soil	LCGTSSDAVDAVKLEIPKGFKFLKPKMINTFKIIEK*
Ga0118724_11362162	3300009127	Marine	MASDAVDAVKLEIPSGFKFFKFKLTQFLKNILKLTISKI*
Ga0118724_11380122	3300009127	Marine	MLFRYSCLCGAASDEVDAVKLEIPLGFKLLKFKMSEYLKNIGKITILKI*
Ga0102961_10435971	3300009145	Soil	MLFRYNRLCGTASNTVDAVKLEIPQGFKLLKFKMSEYLKNIVKLTISK
Ga0102961_11307491	3300009145	Soil	SRLCGTASDTVDAVKLEIPQGFKLLKFKMSKHLKNIVKLNISKI*
Ga0117908_10100621	3300009314	Marine	MLFRYSCLWGAASDEVDAVKLEIPLGFKLLKFKMSEYLKNIGKITILKI*
Ga0117908_101006212	3300009314	Marine	MRSGTDEVDAVKLEIPLGFKLLKFKMSEYLKNIGKITILKI*
Ga0117908_101382112	3300009314	Marine	MLFRYSCLCGAASDEVDAVKLEIPLGFKLLKFKMAKYLKNIGKITILKI*
Ga0118657_1000195424	3300009506	Mangrove Sediment	MLFRYSRLCGTASDTVDEVKLEIPQGFKILKFKMSEYLKIIVKETISKI*
Ga0118657_102787216	3300009506	Mangrove Sediment	MSFRYSRLCGTASDTVDAVKLKIPKGFKILKFKMSEYPKNIIKLAIL*
Ga0118657_103025031	3300009506	Mangrove Sediment	SRLCGTTSAAVDAVKSEIPQGFKLLKFKMSEYVKNIVELTVSKI*
Ga0118657_103517592	3300009506	Mangrove Sediment	MASDAVDAVKLEIPQGFKLLKFKRSEYLKNILKLIISKI*
Ga0118657_126417071	3300009506	Mangrove Sediment	RLYGTAPDAVDAVKLEIPKGFKFLKCRMVKYLKNIIKLTISKI*
Ga0123573_107809921	3300009509	Mangrove Sediment	CGTASDAVDAVKLEIPQGLKLLKFKMSEYLKNIVKLNIS*
Ga0114923_102164863	3300009788	Deep Subsurface	DAVDAVKLEIPEGFKFLKFKSTEFLKKSLKLTILKI*
Ga0118731_1077848301	3300010392	Marine	SDAVDAVKLEIPQGFKLLKFKMSEYLKNIVKLTISKI*
Ga0136852_114685911	3300010412	Mangrove Sediment	MSFRYPPEGFGGCGTASDAVDAVKFEIPKGFKLLKFKMSKYLKNIVKLTSSKI*
Ga0136851_1000983811	3300010413	Mangrove Sediment	MLFRYSRLCGTASEAVDAVNLEIPQGFKLLKFKMSEYLKNIVTLTISKI*
Ga0136851_106280812	3300010413	Mangrove Sediment	VDAVKLEILKGFKLLKFKMSKYLKNIVKLTSSKI*
Ga0136851_107483632	3300010413	Mangrove Sediment	SDAVDAVKLEIPKGLKLLEFKIPEYLKNIFKLTISIT*
Ga0136851_110721151	3300010413	Mangrove Sediment	SRLCGTASDAVDAMKLEIRYGFKLLKFKKAEYLKNIVNLTIS*
Ga0136851_113684222	3300010413	Mangrove Sediment	VDAVKSEIPQGFKLLKFKMSEYLKNIVELTVSKI*
Ga0118733_1025840412	3300010430	Marine Sediment	MKTFQSGICGTASDPVDAVKLKIPKGFKYLKLKMSECFKNIVKLTISKI*
Ga0075349_11117722	3300014305	Natural And Restored Wetlands	ASDAVDAVKLEIPKGFKFLKFKMSEYLKNIVNLTISKI*
Ga0194006_10490652	3300019700	Sediment	MASDTVDAVKLGIPQGFKLLKFKMSEYLKNIVKLTISKI
Ga0194016_10400191	3300019708	Sediment	MLFRYSRLCGTASGAVDAVKLEILKGFKLLKFKMSEYLKNIVKLTISKI
Ga0193976_10334881	3300019727	Sediment	MLFRYSRLCGTASDAVDAVKWEIPQGFKLLKFKMSECLKNIVKLTI
Ga0224514_101098802	3300022217	Sediment	MLLRYSRLCGTASDAVDAVKLGIPQGFKLLKFKMSEYLKNIVKLTIS
Ga0224502_102375881	3300022218	Sediment	SDAVGAVKLGIPQGFKLLKFKMSEYLKNIVKLTISKILNAQLGS
Ga0224513_100143693	3300022220	Sediment	MLLRYSRLCGKASDAVDAVKLGIPQGFKLLKFKMSEYLKNIVKLTISKIL
Ga0224507_102350071	3300022307	Sediment	SRLCGTASDAVGAVKLGIPQGFKLLKFKMSEYLKNIVKLTISKILNAQLGS
Ga0222698_10219504	3300022860	Saline Water	AVDAVKLEIPQGFKLLKFKMPECLKNIVKLTSSKI
Ga0222698_10356112	3300022860	Saline Water	MLFRYSRLCGTASDAVDAVILLRRIKIGNPAGFKLLKFKMSEYLKNIVKLIISKI
(restricted) Ga0255045_100802662	3300024528	Seawater	MLFRYSRLCGTASDAVDAVKLEILQGFKLLKFKMSEYLKNIVKLTISKI
Ga0210120_10261993	3300025556	Natural And Restored Wetlands	KMLFRYSYLCGKTSDAVDAAKLEIPEGFKLLKFRMAEYLKNIIELTISKI
Ga0210141_10380111	3300025557	Natural And Restored Wetlands	MLFRYSRLCGTASDAVRRSRLRGDAVKSEIPQGFKLLKLKMSEYIKNIVELTILKI
Ga0210141_10440793	3300025557	Natural And Restored Wetlands	LFRYSRLCGTASDTVGAVKLEIPQGFKLLKFKMSEYLRNTFN
Ga0210084_10004113	3300025564	Natural And Restored Wetlands	MLFRYSRLCGTASDAVDAVKSEIPQGFKLLKFKMSEYLKNMVKLTISEI
Ga0210084_10072071	3300025564	Natural And Restored Wetlands	MLFRYSRLCGTASDAVDAVKLEVLQDFKLLQFKMLEYLKNIVKLTISKI
Ga0210110_10836311	3300025565	Natural And Restored Wetlands	MSFRYSRQCGTASDAVDAVKWEIPQGFKLLKFKIAEYLKNIFKLTISKILNAQLRFKFNN
Ga0210085_10000199	3300025583	Natural And Restored Wetlands	MASDAVDAVKLEIPQGFKLLRFKMSKYLKNIIKLTISKI
Ga0210085_11371491	3300025583	Natural And Restored Wetlands	LCGTASDAVDAVKLEIPQGFKLLKFKMAEYLKKFFKLTLSKI
Ga0210074_10484773	3300025599	Natural And Restored Wetlands	ALRGKMSFRYCRLCETASDAVDAVKLEIQQGFKFLKFRMSECLKNMIK
Ga0208279_10128551	3300025649	Saline Lake	RYSRLCGTASDAVDAVILLRRIKIGNPAGFKLLKFKMSEYLKNIVKLIISKI
Ga0210122_10101204	3300025799	Natural And Restored Wetlands	MLFRYSRLCGTASNTVDAVKLEIPQGFKLLKFKMSEYLKNIVKLTISK
Ga0210122_10740302	3300025799	Natural And Restored Wetlands	CGTASDAIDAVKLESPQGFKLLKFKITEYLKNIIIVTISKI
Ga0210122_11005691	3300025799	Natural And Restored Wetlands	SDAVDAVKLEIPQGFKLLQFKMSECLKNIVKLTISKI
Ga0210097_11802671	3300025801	Natural And Restored Wetlands	MLFRYIRLCGTASDGVDAVKLEIPQGFKLLKFKMSEYLKNIVKLTISII
Ga0210111_10161782	3300025802	Natural And Restored Wetlands	KVLFRYSHLCGTASDAIDAVKLESPQGFKLLKFKITEYLKNIVIVTISKI
Ga0210064_11416121	3300025813	Natural And Restored Wetlands	HLCGTASDAVDVVKLEIPQGFKLLQFKMSEYLKNIVKLTISKI
Ga0210101_10593911	3300025814	Natural And Restored Wetlands	YSRLCETASDAVDAVKLEIQQGFKFLKFRMSECLKNMIK
Ga0210144_10033924	3300025817	Natural And Restored Wetlands	MLFRYSRLCGKASDAVDGVKLEIPQGFKLLKFKMAEYLKDIVKLTISKI
Ga0210080_10168112	3300025969	Natural And Restored Wetlands	SCLCGTASDAVDAVKSEIPQGFKLLKFKMSEYLKNIVKLTISKI
Ga0210081_10713541	3300025970	Natural And Restored Wetlands	RLCGTASDAVGAVKLEIPKGFRLLKFKMSECLKNIIKLTISKI
Ga0210072_10025551	3300025977	Natural And Restored Wetlands	YSRLCGTASDAVNAVKLEIPKGFKLLKFKMSECLKNIVKLPISKI
Ga0210106_10226432	3300025983	Natural And Restored Wetlands	SRLCGKASDTVDAVKLEIPKGFKLLKFKMSEYLKLILKLTISKI
Ga0210106_10242401	3300025983	Natural And Restored Wetlands	ASDAVDAVKLEIPKGFKLLKFKMSEYLKNIVKLTISKI
Ga0210106_10380662	3300025983	Natural And Restored Wetlands	ASDAVDAVKLEIPKGFKLLKFKMSEYLKNIVKLPISKI
Ga0210082_10013232	3300025984	Natural And Restored Wetlands	MSFRYIRLWETASDAVDVVKLQIPQGFKFLKFRMPEYLKNMIQLTILKI
Ga0210082_10109291	3300025984	Natural And Restored Wetlands	LCGTASDAVDAVKSEIPQGFKLLKLKMSEYIKNIVELTISKI
Ga0210107_10340771	3300026352	Natural And Restored Wetlands	YSHLCGTASDAIDAVKLESPQGFKLLKFKITEYLKNIIIVTISKI
Ga0209536_1002043762	3300027917	Marine Sediment	MLFRYSRLCGTAPYAVDAVKLEIPKSFKYLKLRMAQYLKKIIKLTISKI
Ga0209536_1003263173	3300027917	Marine Sediment	MLFRYSRLCGTASDAVDAVTLEIPQGFKFLKFKMPEYLKNIAKLTISKI
Ga0134606_100351702	3300029827	Marine Sediment	RLCGTASDAVDAVKLEIPRGFKLLKFEMSEYLNNFVAITISKI
Ga0315556_11594582	3300031256	Salt Marsh Sediment	MASDAVDAVKLEIPKGFKSLKFKMSKYLKNNVKSTISKI
Ga0307425_10636772	3300031277	Salt Marsh	MASDAVDAVKLKIPQGFKLLKFKMSEYLKNIVKLTISKI
Ga0307425_11259211	3300031277	Salt Marsh	TASDAVDAVKLEIPQGFKFLKFRITEYLKNIIKITISKI
Ga0307423_10044099	3300031371	Salt Marsh	MLFRYSYLCGTTSDAVDAVKLEIPEGFKLLKFRMAEYLKNIIELTISKI
Ga0307423_11146121	3300031371	Salt Marsh	MLFRYSYLCGKTSDAVDAVKLEIPEGFKLLKFRMAEYLKNIIELTIS
Ga0315542_10139481	3300031552	Salt Marsh Sediment	TASDAVDAVKLEIPQGFKLLKFKMLEYLKNIVKLTSSKI
Ga0307376_102769312	3300031578	Soil	RYSRLCGTASDAVDAVKLEIPLGFKLLKFKTSEYLKNIVKLTISII
Ga0316575_100023582	3300031665	Rhizosphere	MSFRYSRLCGTASDAADAVKLEIPQGFKLLKFEMPEYLNNFVKITISKI
Ga0316575_100086951	3300031665	Rhizosphere	SDTVDVVKLKIPLGFKLLKFKMIEYLKNIAKLTISKI
Ga0316575_100774403	3300031665	Rhizosphere	RLCGTASDAVDAVKLEIPQGFKLLKFEMSEYLNNFVKSTISKI
Ga0316575_101304061	3300031665	Rhizosphere	MSFRYSRLCGTVSDAVDAVKLEIPQGFKLLKFEMSEYLNNFVKITIS
Ga0316579_102509231	3300031691	Rhizosphere	RYSRLCGTASDAVDAVKLEIPRGFKLLKFEMSEYLNNFVAITISKI
Ga0316579_102994462	3300031691	Rhizosphere	MLFRYSRLCGTASDAVDAVKLEILKGFKLLKLKLTEYLKNIIKLTISKI
Ga0316579_103425031	3300031691	Rhizosphere	RSFRYSRLCGTASDAADAVKLEIPQGFKLLKFEMPEYLNNFVKITISKI
Ga0315535_11637252	3300031699	Salt Marsh Sediment	RLCGMASDAVDAVKLEIPKGFKSLKFKMSKYLKNNVKSTISKI
Ga0315540_104388911	3300032061	Salt Marsh Sediment	MSFRYSRLCGTASDKADAVKLEIPLGFKLLKFKMLEYLKDIFKLAISKI
Ga0316583_100105861	3300032133	Rhizosphere	SDAVDAVKLEIPQGFKLLKFEMSEYLNNFVKITISKI
Ga0316583_100251031	3300032133	Rhizosphere	RLCGTTSDTVDVVKLEIPKGFKLLKFKMLEYLKNIFKLTISKI
Ga0316583_100386203	3300032133	Rhizosphere	DTVDVVKLKIPLGFKLLKFKMIEYLKNIVKLTISKI
Ga0316583_100437081	3300032133	Rhizosphere	SRLCGTASDAVDAVKLEIPQGFKLLKFEMSEYLNNFVKSTISKI
Ga0316583_100659153	3300032133	Rhizosphere	CGTASDAVDAVKLEIPQGFKLLKFEMSEYLNNYVKITISKI
Ga0316583_101616272	3300032133	Rhizosphere	DAVDAVKLEIPQGFKLLKFEMSEYLNNFVKITISKI
Ga0316585_102990581	3300032137	Rhizosphere	IRKMLFHYSRLCETASDTVDTVKLGIPQGFKFLKFKMSEYLKNVASHGLTPVALKI
Ga0316593_100060382	3300032168	Rhizosphere	MLFRYSRLCGTASDAIDAVKLEILKGFKLLKFKMTEYLKNIIKLTISKI
Ga0316593_101381861	3300032168	Rhizosphere	MLFRYSRLCGTTSDAVDAVKLEIPKGFKLLKFKMSGYLKNIIKLTILKI
Ga0316198_101477161	3300032251	Sediment	CGTASDAVDAVKLEIPKGFKLLTFKISECLKNMVKSPTSKI
Ga0316196_101284642	3300032252	Sediment	DAIDAVKLEIPKGFEFLKFKMSEYLKKIVNLTISKI
Ga0316191_113558021	3300032258	Worm Burrow	LCGTASDAVGAVKLGIPQGFKLLKFKMSEYLKNIVKLTISKILNAQLGS
Ga0316190_101207681	3300032259	Worm Burrow	MLFRYSRLCGTASDTVDAVKLGIPQGFKLLKFKMSEYLKNIVKVTLSK
Ga0316190_103897342	3300032259	Worm Burrow	FAADPRKMLFRYSRLCGTASDAVRRFRLRGDAVKLEIPQGFKLLKYKMSEYLKNIVKLTISKI
Ga0316192_102172073	3300032260	Worm Burrow	YSRLCGTASDAVDAVKLEIPKGSKLLKFKISEYLKNIVKLTIPKI
Ga0316195_101839542	3300032263	Sediment	RYSELCVTASGTVDAVKLEIPEGFNFLKFKMSEYLMNIIEVTISKN
Ga0316195_102388431	3300032263	Sediment	MLFRYRHLYVTASDAVDAVKLEIPQGFKLLKFKMTEYLKNIV
Ga0316193_109001671	3300033429	Sediment	MLFRYSRLCGTASDAVDAVKLEIPKGSKLLKFKISEYLKNIVKLTIPKI

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign