Sample 3300025802

Overview

Basic Information
IMG/M Taxon OID	3300025802 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0111376 \| Gp0101337 \| Ga0210111
Sample Name	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWC_D2 (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	250613017
Sequencing Scaffolds	26
Novel Protein Genes	26
Associated Families	24

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1
Not Available	8
All Organisms → cellular organisms → Bacteria	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Granulosicoccaceae → Granulosicoccus → Granulosicoccus antarcticus	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	1
All Organisms → cellular organisms → Bacteria → FCB group	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter phosphatis	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands → Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	USA: San Francisco Bay, California
Coordinates	Lat. (^o)	38.015041	Long. (^o)	-122.501831	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000816	Metagenome / Metatranscriptome	879	Y
F004591	Metagenome / Metatranscriptome	432	Y
F008223	Metagenome / Metatranscriptome	337	Y
F016304	Metagenome / Metatranscriptome	248	Y
F016971	Metagenome / Metatranscriptome	243	Y
F018371	Metagenome / Metatranscriptome	235	Y
F019205	Metagenome / Metatranscriptome	231	Y
F024682	Metagenome / Metatranscriptome	205	Y
F029294	Metagenome	189	Y
F042645	Metagenome / Metatranscriptome	158	Y
F048676	Metagenome / Metatranscriptome	148	Y
F049052	Metagenome	147	Y
F051294	Metagenome / Metatranscriptome	144	Y
F055469	Metagenome / Metatranscriptome	138	Y
F059980	Metagenome / Metatranscriptome	133	Y
F063710	Metagenome	129	Y
F074799	Metagenome / Metatranscriptome	119	Y
F076224	Metagenome	118	Y
F081707	Metagenome	114	Y
F085823	Metagenome / Metatranscriptome	111	Y
F088630	Metagenome	109	N
F094484	Metagenome	106	Y
F104552	Metagenome / Metatranscriptome	100	Y
F105196	Metagenome / Metatranscriptome	100	Y

Family

Category

Number of Sequences

3D Structure?

F000816

Metagenome / Metatranscriptome

879

F004591

Metagenome / Metatranscriptome

432

F008223

Metagenome / Metatranscriptome

337

F016304

Metagenome / Metatranscriptome

248

F016971

Metagenome / Metatranscriptome

243

F018371

Metagenome / Metatranscriptome

235

F019205

Metagenome / Metatranscriptome

231

F024682

Metagenome / Metatranscriptome

205

F029294

Metagenome

189

F042645

Metagenome / Metatranscriptome

158

F048676

Metagenome / Metatranscriptome

148

F049052

Metagenome

147

F051294

Metagenome / Metatranscriptome

144

F055469

Metagenome / Metatranscriptome

138

F059980

Metagenome / Metatranscriptome

133

F063710

Metagenome

129

F074799

Metagenome / Metatranscriptome

119

F076224

Metagenome

118

F081707

Metagenome

114

F085823

Metagenome / Metatranscriptome

111

F088630

Metagenome

109

F094484

Metagenome

106

F104552

Metagenome / Metatranscriptome

100

F105196

Metagenome / Metatranscriptome

100

Scaffold	Taxonomy	Length	IMG/M Link
Ga0210111_1000015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	42817	Open in IMG/M
Ga0210111_1000289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13478	Open in IMG/M
Ga0210111_1013239	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	2156	Open in IMG/M
Ga0210111_1013991	Not Available	2090	Open in IMG/M
Ga0210111_1014496	All Organisms → cellular organisms → Bacteria	2051	Open in IMG/M
Ga0210111_1016178	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1932	Open in IMG/M
Ga0210111_1020938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1673	Open in IMG/M
Ga0210111_1032244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Granulosicoccaceae → Granulosicoccus → Granulosicoccus antarcticus	1304	Open in IMG/M
Ga0210111_1052226	All Organisms → cellular organisms → Bacteria → Proteobacteria	991	Open in IMG/M
Ga0210111_1061596	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	902	Open in IMG/M
Ga0210111_1062553	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
Ga0210111_1063099	All Organisms → cellular organisms → Bacteria → FCB group	890	Open in IMG/M
Ga0210111_1066195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter phosphatis	866	Open in IMG/M
Ga0210111_1070352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	837	Open in IMG/M
Ga0210111_1075216	Not Available	807	Open in IMG/M
Ga0210111_1079796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	780	Open in IMG/M
Ga0210111_1092563	Not Available	718	Open in IMG/M
Ga0210111_1096543	Not Available	701	Open in IMG/M
Ga0210111_1108847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	656	Open in IMG/M
Ga0210111_1112977	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
Ga0210111_1116046	Not Available	633	Open in IMG/M
Ga0210111_1123631	Not Available	611	Open in IMG/M
Ga0210111_1130377	Not Available	593	Open in IMG/M
Ga0210111_1152469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	543	Open in IMG/M
Ga0210111_1168708	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	513	Open in IMG/M
Ga0210111_1170588	Not Available	510	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0210111_1000015

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales

42817

Open in IMG/M

Ga0210111_1000289

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria

13478

Open in IMG/M

Ga0210111_1013239

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae

2156

Open in IMG/M

Ga0210111_1013991

Not Available

2090

Open in IMG/M

Ga0210111_1014496

All Organisms → cellular organisms → Bacteria

2051

Open in IMG/M

Ga0210111_1016178

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium

1932

Open in IMG/M

Ga0210111_1020938

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria

1673

Open in IMG/M

Ga0210111_1032244

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Granulosicoccaceae → Granulosicoccus → Granulosicoccus antarcticus

1304

Open in IMG/M

Ga0210111_1052226

All Organisms → cellular organisms → Bacteria → Proteobacteria

991

Open in IMG/M

Ga0210111_1061596

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium

902

Open in IMG/M

Ga0210111_1062553

All Organisms → cellular organisms → Bacteria

894

Open in IMG/M

Ga0210111_1063099

All Organisms → cellular organisms → Bacteria → FCB group

890

Open in IMG/M

Ga0210111_1066195

All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter phosphatis

866

Open in IMG/M

Ga0210111_1070352

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria

837

Open in IMG/M

Ga0210111_1075216

Not Available

807

Open in IMG/M

Ga0210111_1079796

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales

780

Open in IMG/M

Ga0210111_1092563

Not Available

718

Open in IMG/M

Ga0210111_1096543

Not Available

701

Open in IMG/M

Ga0210111_1108847

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium

656

Open in IMG/M

Ga0210111_1112977

All Organisms → cellular organisms → Bacteria

642

Open in IMG/M

Ga0210111_1116046

Not Available

633

Open in IMG/M

Ga0210111_1123631

Not Available

611

Open in IMG/M

Ga0210111_1130377

Not Available

593

Open in IMG/M

Ga0210111_1152469

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium

543

Open in IMG/M

Ga0210111_1168708

All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon

513

Open in IMG/M

Ga0210111_1170588

Not Available

510

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0210111_1000015	Ga0210111_100001549	F019205	MFDTKKNFSTRAADAADLVIDFATLGEYGLEPVPPTAPACEGRRRSGTMRSTGAWRSAIDRFATHA
Ga0210111_1000289	Ga0210111_10002897	F016304	VLVGFLLAADAFVVAALAIARPGGWLPPFVAFGVILLGLIWFQAWALRHRDDDG
Ga0210111_1013239	Ga0210111_10132394	F059980	MEEAFCMGFSGGFEQGKPATALPELINCISTNIEGV
Ga0210111_1013991	Ga0210111_10139913	F019205	FEPMFETKKSFSGQLADATDLMIDFATLGEYGLEPVERPVPSCEGRRRSGSLRSTGAWRSAIDRFATQP
Ga0210111_1014496	Ga0210111_10144964	F004591	MRNPPILISVIGFFAALAGFAHLFFGLRVLGFDWFGALGDLPAFESVGIWGWMAIGMAVLWLLIAFGLWAL
Ga0210111_1016178	Ga0210111_10161782	F048676	KVLFRYSHLCGTASDAIDAVKLESPQGFKLLKFKITEYLKNIVIVTISKI
Ga0210111_1020938	Ga0210111_10209382	F074799	MNETRTREHVQGHAEAVERGDMDAVVADFSEELRPQAPEIAKALPQPVTSAEVLSLEVGDDESVALIRYSGDTGEVRIRSRWQDQGGRPVIVGAEPVA
Ga0210111_1032244	Ga0210111_10322443	F063710	QEAYVMNKPRQRSLRVRVEHEPNRFSDDCLERIYEQLHPTKSRKVTPDKNNKQGEVELQKGSGGRQ
Ga0210111_1052226	Ga0210111_10522261	F000816	MSYKKNARPNTMRKPGKRVLIGETREEEAARLEREIAAHPVTKCEPGEYKPTSSRPGWSNKPFVPQKDQAIAEGIAKKMMRKPKA
Ga0210111_1061596	Ga0210111_10615962	F042645	MAKISDLDVQEIRQCFEENLNQAQRADKRQKMRMRRKMRDEVFNLLTWEKPTPTGIMNRWEERLQDVFKVMPYGFKEELFKMLVAKMQHPLRMAKTK
Ga0210111_1062553	Ga0210111_10625532	F085823	MPEPTPEHPEDAGIAEEIPELTAIEGARLLGNDARSRLRADGFDDAQIDEWAETFIAEEGSGTVEQFVAWIVRMEQSG
Ga0210111_1063099	Ga0210111_10630991	F076224	NNTVAINPNLWNLRKALFADLLVAAQKLNKTKFDRIVPKGISENEEVVVVNAISKLKNTSGDKYIFVTPDSIFEESYLFDPVVAEKKLKWTEKHIKANEKQIKEFTLKLKYDSTFKFYAEMKNGQPFTVAFDSNICRVDIPNFAVSEVPIPEIAAIDPLIEQATNNIHFYAYKIPKIEKSKSEIKIEYYNDDSVYSYVVNYNTLNIDSLVQANAGTDLYNLENFKPVKPSDDTMLIKYQIDRNYFHKYYSDDEFKKQMEELQKQLQELSRDLQNKKIRVHTEVTKSPGK
Ga0210111_1066195	Ga0210111_10661951	F104552	MVICKASTHFLSRIACSQVWALLLLFGLLVPAQAAEVLKPDALPQAQATLERLEQQLASARATTAQELKAFKKEIAKVRSSALDCVQQAEPEIESLDSQLAILQPAPPKDTQAKTAEEPQPAEQPEAPVSSAIARQLQDLQSRKASLEGRIANCKLLLLGSNNLDSKVDDYLRSLQTRQLLTRGPDLVSVLQANLDERERWLDFTRQLAVTSTGWDAIRPIHLAGAAAVGLLGFILGRIVPRRLRARAARMKVGEEEVSAGLVQAAMACGASYAPILLALGGI
Ga0210111_1070352	Ga0210111_10703522	F105196	MAIIDRCRDPYGTLSDSRKALLEQLLEAPDQCLWERARGLIIRAVPIVTLENAVRSVRKCRDAGQVPDPFTLYRAVRYAVDYDTSGVVAGRGGICR
Ga0210111_1075216	Ga0210111_10752162	F088630	MKIEYHCPTHGKVEPHDEAAPIPTCPKLIRREVEGKVVPETCGQPLTAYMG
Ga0210111_1079796	Ga0210111_10797962	F094484	MKRLALAFLLCGLTVAAANTAHAEGRRMIVFALYGAAGTTGSTATTTVIDFTTQVACREARDELRRNAKAPGFGLFATCVEP
Ga0210111_1092563	Ga0210111_10925632	F008223	MRLFDWLFERKPRPPDPIEEINRIMARFTTATIMGVDRDDLGRYPAKQFKVMAFHYGAIEYLARRYGLDETQTLGLFVAFIDRYFNMPINETGSISERLQGFQDNADEHRFLEAGVDVFRRWHEQDERRAPLQLGQMLKDA
Ga0210111_1096543	Ga0210111_10965431	F081707	TMYVRIAQFEGGDRDWDEFADGIRDSIRSGAEGTPLEAALDAVKRVMLLVDRESNRGANMVLCETEDDVRRVDDALNEMTPAGGRGTRTSVDIFEVVLDEAP
Ga0210111_1108847	Ga0210111_11088472	F008223	MGILDRLFPGTPKPPGPEQEISRIIDRFTTATIMGIDREDLGRYPAKQYKVMAFHYGAIEYLAGQYGLEELQTLGLFVAFLDKYFNLPVTETGSIAERLQGFRDDPAQQRFLAAGVDIFRRWHEHNERRA
Ga0210111_1112977	Ga0210111_11129772	F051294	PGTGVVFTEFRGVPRSKFHLRVRDPGAPAMAIQVSNIEGMVAQMKAAGVNLISANGELVDFGNGIHNIFVEDPNGMNLELFERAE
Ga0210111_1116046	Ga0210111_11160461	F029294	MKQETGETRDAIIEDDEKQITEIINSNKNLKDPYWIVLFAKPSKTCVDGKYPTLLKHIKAYKTKPMSQVGMVIGEVDNSRGTISWEVNMPQRPFDFDKLQLYGAKSCNEVVVETTTIPGAYITK
Ga0210111_1123631	Ga0210111_11236311	F055469	MLKRTVVIFAAAAFFGGALPTQTAQAGDDIWDLMNPSWWADEIFDNNHDDDDWWYYQHYRYGPYWGGAYDQYPQVIVIQQEPETAQNPETRRPE
Ga0210111_1130377	Ga0210111_11303771	F049052	VADAEKSAAFLKQAVGFEAGVVMPMGTHPVVAQLLGLTGAEWRMTRGKIPGTTADFGLIQYSGVPREKMMSSAKDPGSPAFTMVVRDIQSATDEWVKAGGTVATTGGQPIVRANGAGNVFVRDINGLMWELIQAAKQ
Ga0210111_1152469	Ga0210111_11524691	F016971	MNQVAQDLPVEESCAVEVVVYIKKDLGEDQQGLVISALQQTNGIIGAEFCVMRNHLVLAKYDKDIMTSQDVLKSFNSLHLDAKLVGPI
Ga0210111_1168708	Ga0210111_11687082	F024682	MYLNAEDELISKLKKEIGKTLPAMFAGMAENMLENNKDVIIAWLKENKDLVKQVIES
Ga0210111_1170588	Ga0210111_11705881	F018371	MDYAHVITPKKLTNMQDMEVHVNGPDGANRLYIYSGMAEVELCGGLPHPRWSLEVICFNIGRKYNCSGGDEVLKIVASAALAGGRTDGVASFAGWEIFGAAGELDVEDHRVRMNIAAGARDTQAFLEQISFH

Scaffold ID

Protein ID

Family

Sequence

Ga0210111_1000015

Ga0210111_100001549

F019205

MFDTKKNFSTRAADAADLVIDFATLGEYGLEPVPPTAPACEGRRRSGTMRSTGAWRSAIDRFATHA

Ga0210111_1000289

Ga0210111_10002897

F016304

VLVGFLLAADAFVVAALAIARPGGWLPPFVAFGVILLGLIWFQAWALRHRDDDG

Ga0210111_1013239

Ga0210111_10132394

F059980

MEEAFCMGFSGGFEQGKPATALPELINCISTNIEGV

Ga0210111_1013991

Ga0210111_10139913

F019205

FEPMFETKKSFSGQLADATDLMIDFATLGEYGLEPVERPVPSCEGRRRSGSLRSTGAWRSAIDRFATQP

Ga0210111_1014496

Ga0210111_10144964

F004591

MRNPPILISVIGFFAALAGFAHLFFGLRVLGFDWFGALGDLPAFESVGIWGWMAIGMAVLWLLIAFGLWAL

Ga0210111_1016178

Ga0210111_10161782

F048676

KVLFRYSHLCGTASDAIDAVKLESPQGFKLLKFKITEYLKNIVIVTISKI

Ga0210111_1020938

Ga0210111_10209382

F074799

MNETRTREHVQGHAEAVERGDMDAVVADFSEELRPQAPEIAKALPQPVTSAEVLSLEVGDDESVALIRYSGDTGEVRIRSRWQDQGGRPVIVGAEPVA

Ga0210111_1032244

Ga0210111_10322443

F063710

QEAYVMNKPRQRSLRVRVEHEPNRFSDDCLERIYEQLHPTKSRKVTPDKNNKQGEVELQKGSGGRQ

Ga0210111_1052226

Ga0210111_10522261

F000816

MSYKKNARPNTMRKPGKRVLIGETREEEAARLEREIAAHPVTKCEPGEYKPTSSRPGWSNKPFVPQKDQAIAEGIAKKMMRKPKA

Ga0210111_1061596

Ga0210111_10615962

F042645

MAKISDLDVQEIRQCFEENLNQAQRADKRQKMRMRRKMRDEVFNLLTWEKPTPTGIMNRWEERLQDVFKVMPYGFKEELFKMLVAKMQHPLRMAKTK

Ga0210111_1062553

Ga0210111_10625532

F085823

MPEPTPEHPEDAGIAEEIPELTAIEGARLLGNDARSRLRADGFDDAQIDEWAETFIAEEGSGTVEQFVAWIVRMEQSG

Ga0210111_1063099

Ga0210111_10630991

F076224

NNTVAINPNLWNLRKALFADLLVAAQKLNKTKFDRIVPKGISENEEVVVVNAISKLKNTSGDKYIFVTPDSIFEESYLFDPVVAEKKLKWTEKHIKANEKQIKEFTLKLKYDSTFKFYAEMKNGQPFTVAFDSNICRVDIPNFAVSEVPIPEIAAIDPLIEQATNNIHFYAYKIPKIEKSKSEIKIEYYNDDSVYSYVVNYNTLNIDSLVQANAGTDLYNLENFKPVKPSDDTMLIKYQIDRNYFHKYYSDDEFKKQMEELQKQLQELSRDLQNKKIRVHTEVTKSPGK

Ga0210111_1066195

Ga0210111_10661951

F104552

MVICKASTHFLSRIACSQVWALLLLFGLLVPAQAAEVLKPDALPQAQATLERLEQQLASARATTAQELKAFKKEIAKVRSSALDCVQQAEPEIESLDSQLAILQPAPPKDTQAKTAEEPQPAEQPEAPVSSAIARQLQDLQSRKASLEGRIANCKLLLLGSNNLDSKVDDYLRSLQTRQLLTRGPDLVSVLQANLDERERWLDFTRQLAVTSTGWDAIRPIHLAGAAAVGLLGFILGRIVPRRLRARAARMKVGEEEVSAGLVQAAMACGASYAPILLALGGI

Ga0210111_1070352

Ga0210111_10703522

F105196

MAIIDRCRDPYGTLSDSRKALLEQLLEAPDQCLWERARGLIIRAVPIVTLENAVRSVRKCRDAGQVPDPFTLYRAVRYAVDYDTSGVVAGRGGICR

Ga0210111_1075216

Ga0210111_10752162

F088630

MKIEYHCPTHGKVEPHDEAAPIPTCPKLIRREVEGKVVPETCGQPLTAYMG

Ga0210111_1079796

Ga0210111_10797962

F094484

MKRLALAFLLCGLTVAAANTAHAEGRRMIVFALYGAAGTTGSTATTTVIDFTTQVACREARDELRRNAKAPGFGLFATCVEP

Ga0210111_1092563

Ga0210111_10925632

F008223

MRLFDWLFERKPRPPDPIEEINRIMARFTTATIMGVDRDDLGRYPAKQFKVMAFHYGAIEYLARRYGLDETQTLGLFVAFIDRYFNMPINETGSISERLQGFQDNADEHRFLEAGVDVFRRWHEQDERRAPLQLGQMLKDA

Ga0210111_1096543

Ga0210111_10965431

F081707

TMYVRIAQFEGGDRDWDEFADGIRDSIRSGAEGTPLEAALDAVKRVMLLVDRESNRGANMVLCETEDDVRRVDDALNEMTPAGGRGTRTSVDIFEVVLDEAP

Ga0210111_1108847

Ga0210111_11088472

F008223

MGILDRLFPGTPKPPGPEQEISRIIDRFTTATIMGIDREDLGRYPAKQYKVMAFHYGAIEYLAGQYGLEELQTLGLFVAFLDKYFNLPVTETGSIAERLQGFRDDPAQQRFLAAGVDIFRRWHEHNERRA

Ga0210111_1112977

Ga0210111_11129772

F051294

PGTGVVFTEFRGVPRSKFHLRVRDPGAPAMAIQVSNIEGMVAQMKAAGVNLISANGELVDFGNGIHNIFVEDPNGMNLELFERAE

Ga0210111_1116046

Ga0210111_11160461

F029294

MKQETGETRDAIIEDDEKQITEIINSNKNLKDPYWIVLFAKPSKTCVDGKYPTLLKHIKAYKTKPMSQVGMVIGEVDNSRGTISWEVNMPQRPFDFDKLQLYGAKSCNEVVVETTTIPGAYITK

Ga0210111_1123631

Ga0210111_11236311

F055469

MLKRTVVIFAAAAFFGGALPTQTAQAGDDIWDLMNPSWWADEIFDNNHDDDDWWYYQHYRYGPYWGGAYDQYPQVIVIQQEPETAQNPETRRPE

Ga0210111_1130377

Ga0210111_11303771

F049052

VADAEKSAAFLKQAVGFEAGVVMPMGTHPVVAQLLGLTGAEWRMTRGKIPGTTADFGLIQYSGVPREKMMSSAKDPGSPAFTMVVRDIQSATDEWVKAGGTVATTGGQPIVRANGAGNVFVRDINGLMWELIQAAKQ

Ga0210111_1152469

Ga0210111_11524691

F016971

MNQVAQDLPVEESCAVEVVVYIKKDLGEDQQGLVISALQQTNGIIGAEFCVMRNHLVLAKYDKDIMTSQDVLKSFNSLHLDAKLVGPI

Ga0210111_1168708

Ga0210111_11687082

F024682

MYLNAEDELISKLKKEIGKTLPAMFAGMAENMLENNKDVIIAWLKENKDLVKQVIES

Ga0210111_1170588

Ga0210111_11705881

F018371

MDYAHVITPKKLTNMQDMEVHVNGPDGANRLYIYSGMAEVELCGGLPHPRWSLEVICFNIGRKYNCSGGDEVLKIVASAALAGGRTDGVASFAGWEIFGAAGELDVEDHRVRMNIAAGARDTQAFLEQISFH

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300025802: Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWC_D2 (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences