Sample 3300026352

Overview

Basic Information
IMG/M Taxon OID	3300026352 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0111376 \| Gp0101408 \| Ga0210107
Sample Name	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqC_D2 (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	142362338
Sequencing Scaffolds	21
Novel Protein Genes	22
Associated Families	21

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	8
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	2
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	2
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Peregrinibacteria → Candidatus Peribacteria → Candidatus Peribacterales → Candidatus Peribacteraceae → unclassified Candidatus Peribacteraceae → Candidatus Peribacteraceae bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands → Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	USA: San Francisco Bay, California
Coordinates	Lat. (^o)	38.131752	Long. (^o)	-122.266335	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F009170	Metagenome / Metatranscriptome	322	Y
F009304	Metagenome	320	Y
F026445	Metagenome / Metatranscriptome	198	Y
F029294	Metagenome	189	Y
F034771	Metagenome / Metatranscriptome	174	Y
F036294	Metagenome / Metatranscriptome	170	Y
F037736	Metagenome / Metatranscriptome	167	Y
F048676	Metagenome / Metatranscriptome	148	Y
F055469	Metagenome / Metatranscriptome	138	Y
F056621	Metagenome	137	Y
F059979	Metagenome / Metatranscriptome	133	Y
F062568	Metagenome / Metatranscriptome	130	Y
F070131	Metagenome / Metatranscriptome	123	Y
F073570	Metagenome	120	Y
F076109	Metagenome	118	Y
F078289	Metagenome / Metatranscriptome	116	N
F090795	Metagenome	108	Y
F099323	Metagenome / Metatranscriptome	103	N
F099818	Metagenome / Metatranscriptome	103	Y
F103291	Metagenome	101	Y
F105216	Metagenome / Metatranscriptome	100	Y

Family

Category

Number of Sequences

3D Structure?

F009170

Metagenome / Metatranscriptome

322

F009304

Metagenome

320

F026445

Metagenome / Metatranscriptome

198

F029294

Metagenome

189

F034771

Metagenome / Metatranscriptome

174

F036294

Metagenome / Metatranscriptome

170

F037736

Metagenome / Metatranscriptome

167

F048676

Metagenome / Metatranscriptome

148

F055469

Metagenome / Metatranscriptome

138

F056621

Metagenome

137

F059979

Metagenome / Metatranscriptome

133

F062568

Metagenome / Metatranscriptome

130

F070131

Metagenome / Metatranscriptome

123

F073570

Metagenome

120

F076109

Metagenome

118

F078289

Metagenome / Metatranscriptome

116

F090795

Metagenome

108

F099323

Metagenome / Metatranscriptome

103

F099818

Metagenome / Metatranscriptome

103

F103291

Metagenome

101

F105216

Metagenome / Metatranscriptome

100

Scaffold	Taxonomy	Length	IMG/M Link
Ga0210107_1008458	Not Available	1495	Open in IMG/M
Ga0210107_1009562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1411	Open in IMG/M
Ga0210107_1020298	Not Available	989	Open in IMG/M
Ga0210107_1021761	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	958	Open in IMG/M
Ga0210107_1022612	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
Ga0210107_1022627	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8	941	Open in IMG/M
Ga0210107_1023676	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
Ga0210107_1024678	Not Available	905	Open in IMG/M
Ga0210107_1028247	Not Available	849	Open in IMG/M
Ga0210107_1029148	Not Available	837	Open in IMG/M
Ga0210107_1030915	Not Available	815	Open in IMG/M
Ga0210107_1032724	Not Available	793	Open in IMG/M
Ga0210107_1034077	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	778	Open in IMG/M
Ga0210107_1037299	All Organisms → cellular organisms → Bacteria → Proteobacteria	747	Open in IMG/M
Ga0210107_1038421	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	737	Open in IMG/M
Ga0210107_1048517	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	664	Open in IMG/M
Ga0210107_1049637	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Peregrinibacteria → Candidatus Peribacteria → Candidatus Peribacterales → Candidatus Peribacteraceae → unclassified Candidatus Peribacteraceae → Candidatus Peribacteraceae bacterium	657	Open in IMG/M
Ga0210107_1068360	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	570	Open in IMG/M
Ga0210107_1069673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	565	Open in IMG/M
Ga0210107_1074131	Not Available	550	Open in IMG/M
Ga0210107_1085883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	514	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0210107_1008458

Not Available

1495

Open in IMG/M

Ga0210107_1009562

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi

1411

Open in IMG/M

Ga0210107_1020298

Not Available

989

Open in IMG/M

Ga0210107_1021761

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium

958

Open in IMG/M

Ga0210107_1022612

All Organisms → cellular organisms → Bacteria

942

Open in IMG/M

Ga0210107_1022627

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8

941

Open in IMG/M

Ga0210107_1023676

All Organisms → cellular organisms → Bacteria

922

Open in IMG/M

Ga0210107_1024678

Not Available

905

Open in IMG/M

Ga0210107_1028247

Not Available

849

Open in IMG/M

Ga0210107_1029148

Not Available

837

Open in IMG/M

Ga0210107_1030915

Not Available

815

Open in IMG/M

Ga0210107_1032724

Not Available

793

778

All Organisms → cellular organisms → Bacteria → Proteobacteria

747

Open in IMG/M

Ga0210107_1038421

All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium

737

Open in IMG/M

Ga0210107_1048517

All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium

664

Open in IMG/M

Ga0210107_1049637

All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Peregrinibacteria → Candidatus Peribacteria → Candidatus Peribacterales → Candidatus Peribacteraceae → unclassified Candidatus Peribacteraceae → Candidatus Peribacteraceae bacterium

657

Open in IMG/M

Ga0210107_1068360

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

570

Open in IMG/M

Ga0210107_1069673

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49

565

Open in IMG/M

Ga0210107_1074131

Not Available

550

Open in IMG/M

Ga0210107_1085883

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium

514

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0210107_1008458	Ga0210107_10084581	F037736	VPYRVQLDGLQILWLLANPLWTHGIGESRSKTITGWLLMGAADANHIWWLNTNPFTGLLLHLNSYRILHLPCGLLNMLCFLLLCHRQRNDNY
Ga0210107_1009562	Ga0210107_10095621	F026445	VNIDQAKPKRQKRTITLHLGNTLAEYEATYLTEAGLKALIREVEIADSLNWGCLATEHEAGCPRQLHFTHHDSYTRWAKHFNGGQSRVVIPRVRCLDCGAVFSVQPSFIIRYKRYETDAVEKLMTLLFITEDSYRMAGISQSLALDKQQAGTWVALETQQAHAIQPMALWRLVQWLGQLSPAQLNLALGVEPPQTIIEDEKHATECGQKSYIPLVYAPKEALIWWVDYLHGVSEAELTASLERFKAISDRLADITGATVDGWEAAQNALRATFEGITLVECHFHALLKLGQHLATYKRQREQAGQPLSEVEETNIRAAFWRVLKATTPDQYQQALDQLPEAFDQAPLASRKQSLVEKQALFQAWTSDDRLVAVTTALDQCLKFLNRKLDNMQTFHSHQSGLATVNAWAITRNCWRFLKGAKRAGLSP
Ga0210107_1020298	Ga0210107_10202982	F029294	MTQETGETRDAIIEADNKMLQDILNANSSRTEKYWIVLFAKPSKRSVDGKPTLIKHMKAYPKRPSSQVGMLIGEVDNKKGSVEWEINMPQAPMDFNALGALGAKASRDVVTETTTIPQAYITK
Ga0210107_1021761	Ga0210107_10217611	F056621	LNDKERFALAERIQKWIQEQNPYLRLIKRRDEIEKKLKEKNENRKS
Ga0210107_1022612	Ga0210107_10226122	F078289	PKMRELGVSQEVIQYFISNQTSSVSSEDVIKMKQSGLKNDDIMSAIKSDLYRPEQKSTSMKEAELIAKLKESGMSDEAVLQFIQTVKSTRRVDSDGNMTKQYTNESQRTQYPTEGATFPKPDNYGYDPLNGRFLLLVKPQNQ
Ga0210107_1022627	Ga0210107_10226271	F055469	MLKRTVVILAAAAFFWGTVPTQTAQARDDIWDLMNPSWWADKMFDNDDDWRHYRHYAYNPYWGGPYAQRPRVIVIQ
Ga0210107_1023676	Ga0210107_10236761	F009304	MSPRRTIAVARKEFLHIRRDPRSLGMALASIQSRREFLRPAVQAVLDAIRVIVNQKDKTVPVLMKQLALSQDEAGYVYDALRSGWALDGRPTAEAIKLDAELSQRSLGLKELPRPGQTYDFSLLDEIVAGKR
Ga0210107_1024678	Ga0210107_10246781	F105216	AAACSDEAPKPWKAAEMRKLSEQFGHIAEAYAVVDICLPMIDADQDAKRSVIAKIEIRRYSQLSRINTEAEFANFLAYHRQTGGTDEQAAALDQIYRESYETAARHLTSVDNCAETVSDYANTILQTRVEPVP
Ga0210107_1028247	Ga0210107_10282471	F073570	MNESINQIVGILNTTFHQMYQNRVPVGSLTDAQVDNKKTSHKYTIENDLIVYEKYDRHGKLISRVPWSPKPVAEKA
Ga0210107_1029148	Ga0210107_10291481	F078289	MLIIVVFPLYGFNSLVRHEDIPKMRELGISQEVIQYIISNQTSSVSSEDVIKMKQSGLNNNDIMSAIKSDLYRPEQKSTSMKEVELIAKLKESGMSDEAVLQFIQTVKSTRRVDSDGNVTKQYTNESQRTQYPTTGATFPKLDNYGYDPSNGRFLFFIKPQNQE
Ga0210107_1030915	Ga0210107_10309152	F076109	MGVLFNILFVIAVIATIICLCVFLGSLFNLFKKNEMLDIEDV
Ga0210107_1032724	Ga0210107_10327241	F070131	MMGKMLTKIGIIGVFAFCFLLQVDLAGGDNRAYGQNKQKSNVPMEIELHFSSTPMLNEYTVLNVEIRALKDAPNTLIEIKIPSDGFELISGSTQHHEDLSSGSTTLYQLGVLPVALGQYKIAASAISGETDYIFGKREELYVNIGEGFSELSTSSFIPEIADNRSRAVKIGNLSEPPTRVLPDHKPVEGQEVSYLAAPGPGQIEVRGYWFYQDKSGINRPLRDAMVEIWDADLSGDTLLDTTYTNN
Ga0210107_1034077	Ga0210107_10340771	F048676	YSHLCGTASDAIDAVKLESPQGFKLLKFKITEYLKNIIIVTISKI
Ga0210107_1037299	Ga0210107_10372992	F036294	VTVTDRGSSEEAIVGVKPVADEDAVTYPRVKLSESDREVGAEGRHM
Ga0210107_1038421	Ga0210107_10384212	F090795	SGKVTRGSANIAWMPSEFSYVRLEYSHAKADAGVHPTDDRLTLQMSTRIGHHPAHAY
Ga0210107_1042945	Ga0210107_10429451	F099323	LATPTDVQLKNNQHPMNKILGFWRKFKAFLGHRLILELAIIGSFIAFTINPGSLGDIMRICGAFFLFNVLFGNYRIGDVTEGHLVVLGIFLIMLLINAFMPDEMIHRRSFRYFLALPGMMLAIHCLSKRTKPDSKNLVLYCSIAVLALTIQFVAYHTVERVVNSGGLESYGLSGNMHHFGSFAGLILPVLFYFSTQIKGWLRLLCVAGVIAAFYLLWESSSRIAWFAFFSSIL
Ga0210107_1048517	Ga0210107_10485171	F034771	MPRTRPQKLATLDVADEVARRVPGYKGYQDLAQCRDDDRRFRSSIAEYLNSEAHRLERIESHQLGDDYTDLLEEVDTGARKLEYLADSIAMPTTPKGELPSDQAVDELGGLDARIVDELEPLHRVVHELEKAYTHDERFEMNLSELRGITERIADFIEQRNVALAK
Ga0210107_1049637	Ga0210107_10496372	F062568	MPGDCITPAEISDLAQKDTQRLVGSIAKALAANAPFMNVIGGGVFPSGVSDEIKSTVQMQAAPGDSLAVPTFECDTDVCGTVGLQDLTDAVNFTTRLETKRGFGPRICVKKGYAAFRGSYMAAEDSLKKLIVQY
Ga0210107_1068360	Ga0210107_10683602	F059979	MKSFFLILAQLSLVTLVYVFAYRAGYRSAQSKAVSVVKKFADPVACLLDSLSETIDESIS
Ga0210107_1069673	Ga0210107_10696731	F099818	MGLERRGRVIVTGLGPTGHAGRSPLVQWKAAAFVRWQEPDDARVSSPDVRPAKAGM
Ga0210107_1074131	Ga0210107_10741311	F103291	VILQNFLGWLKSKEDYDIKNALASTIIAFIVGITIIGPQIEAIQDQMLSELSELTIFASLIASIAGFDVLTKNVFKIANSKIHLQNKPI
Ga0210107_1085883	Ga0210107_10858831	F009170	QTERRLLELGQPIPALGRQAQQVLEQANELTTGQRERLTGELTTALHAQEQIRHQSQRLTQGKKLRQCKIVNAYDPTIAPILKGKSNCPTQFGRKPGIMAEPATGFLFAALVPAGNPSDVSYVVPLLDKVQGAIQRVTTTPKRQVHSVAGDLGINDATLRHTLHARGILTV

Scaffold ID

Protein ID

Family

Sequence

Ga0210107_1008458

Ga0210107_10084581

F037736

VPYRVQLDGLQILWLLANPLWTHGIGESRSKTITGWLLMGAADANHIWWLNTNPFTGLLLHLNSYRILHLPCGLLNMLCFLLLCHRQRNDNY

Ga0210107_1009562

Ga0210107_10095621

F026445

VNIDQAKPKRQKRTITLHLGNTLAEYEATYLTEAGLKALIREVEIADSLNWGCLATEHEAGCPRQLHFTHHDSYTRWAKHFNGGQSRVVIPRVRCLDCGAVFSVQPSFIIRYKRYETDAVEKLMTLLFITEDSYRMAGISQSLALDKQQAGTWVALETQQAHAIQPMALWRLVQWLGQLSPAQLNLALGVEPPQTIIEDEKHATECGQKSYIPLVYAPKEALIWWVDYLHGVSEAELTASLERFKAISDRLADITGATVDGWEAAQNALRATFEGITLVECHFHALLKLGQHLATYKRQREQAGQPLSEVEETNIRAAFWRVLKATTPDQYQQALDQLPEAFDQAPLASRKQSLVEKQALFQAWTSDDRLVAVTTALDQCLKFLNRKLDNMQTFHSHQSGLATVNAWAITRNCWRFLKGAKRAGLSP

Ga0210107_1020298

Ga0210107_10202982

F029294

MTQETGETRDAIIEADNKMLQDILNANSSRTEKYWIVLFAKPSKRSVDGKPTLIKHMKAYPKRPSSQVGMLIGEVDNKKGSVEWEINMPQAPMDFNALGALGAKASRDVVTETTTIPQAYITK

Ga0210107_1021761

Ga0210107_10217611

F056621

LNDKERFALAERIQKWIQEQNPYLRLIKRRDEIEKKLKEKNENRKS

Ga0210107_1022612

Ga0210107_10226122

F078289

PKMRELGVSQEVIQYFISNQTSSVSSEDVIKMKQSGLKNDDIMSAIKSDLYRPEQKSTSMKEAELIAKLKESGMSDEAVLQFIQTVKSTRRVDSDGNMTKQYTNESQRTQYPTEGATFPKPDNYGYDPLNGRFLLLVKPQNQ

Ga0210107_1022627

Ga0210107_10226271

F055469

MLKRTVVILAAAAFFWGTVPTQTAQARDDIWDLMNPSWWADKMFDNDDDWRHYRHYAYNPYWGGPYAQRPRVIVIQ

Ga0210107_1023676

Ga0210107_10236761

F009304

MSPRRTIAVARKEFLHIRRDPRSLGMALASIQSRREFLRPAVQAVLDAIRVIVNQKDKTVPVLMKQLALSQDEAGYVYDALRSGWALDGRPTAEAIKLDAELSQRSLGLKELPRPGQTYDFSLLDEIVAGKR

Ga0210107_1024678

Ga0210107_10246781

F105216

AAACSDEAPKPWKAAEMRKLSEQFGHIAEAYAVVDICLPMIDADQDAKRSVIAKIEIRRYSQLSRINTEAEFANFLAYHRQTGGTDEQAAALDQIYRESYETAARHLTSVDNCAETVSDYANTILQTRVEPVP

Ga0210107_1028247

Ga0210107_10282471

F073570

MNESINQIVGILNTTFHQMYQNRVPVGSLTDAQVDNKKTSHKYTIENDLIVYEKYDRHGKLISRVPWSPKPVAEKA

Ga0210107_1029148

Ga0210107_10291481

F078289

MLIIVVFPLYGFNSLVRHEDIPKMRELGISQEVIQYIISNQTSSVSSEDVIKMKQSGLNNNDIMSAIKSDLYRPEQKSTSMKEVELIAKLKESGMSDEAVLQFIQTVKSTRRVDSDGNVTKQYTNESQRTQYPTTGATFPKLDNYGYDPSNGRFLFFIKPQNQE

Ga0210107_1030915

Ga0210107_10309152

F076109

MGVLFNILFVIAVIATIICLCVFLGSLFNLFKKNEMLDIEDV

Ga0210107_1032724

Ga0210107_10327241

F070131

MMGKMLTKIGIIGVFAFCFLLQVDLAGGDNRAYGQNKQKSNVPMEIELHFSSTPMLNEYTVLNVEIRALKDAPNTLIEIKIPSDGFELISGSTQHHEDLSSGSTTLYQLGVLPVALGQYKIAASAISGETDYIFGKREELYVNIGEGFSELSTSSFIPEIADNRSRAVKIGNLSEPPTRVLPDHKPVEGQEVSYLAAPGPGQIEVRGYWFYQDKSGINRPLRDAMVEIWDADLSGDTLLDTTYTNN

Ga0210107_1034077

Ga0210107_10340771

F048676

YSHLCGTASDAIDAVKLESPQGFKLLKFKITEYLKNIIIVTISKI

Ga0210107_1037299

Ga0210107_10372992

F036294

VTVTDRGSSEEAIVGVKPVADEDAVTYPRVKLSESDREVGAEGRHM

Ga0210107_1038421

Ga0210107_10384212

F090795

SGKVTRGSANIAWMPSEFSYVRLEYSHAKADAGVHPTDDRLTLQMSTRIGHHPAHAY

Ga0210107_1042945

Ga0210107_10429451

F099323

LATPTDVQLKNNQHPMNKILGFWRKFKAFLGHRLILELAIIGSFIAFTINPGSLGDIMRICGAFFLFNVLFGNYRIGDVTEGHLVVLGIFLIMLLINAFMPDEMIHRRSFRYFLALPGMMLAIHCLSKRTKPDSKNLVLYCSIAVLALTIQFVAYHTVERVVNSGGLESYGLSGNMHHFGSFAGLILPVLFYFSTQIKGWLRLLCVAGVIAAFYLLWESSSRIAWFAFFSSIL

Ga0210107_1048517

Ga0210107_10485171

F034771

MPRTRPQKLATLDVADEVARRVPGYKGYQDLAQCRDDDRRFRSSIAEYLNSEAHRLERIESHQLGDDYTDLLEEVDTGARKLEYLADSIAMPTTPKGELPSDQAVDELGGLDARIVDELEPLHRVVHELEKAYTHDERFEMNLSELRGITERIADFIEQRNVALAK

Ga0210107_1049637

Ga0210107_10496372

F062568

MPGDCITPAEISDLAQKDTQRLVGSIAKALAANAPFMNVIGGGVFPSGVSDEIKSTVQMQAAPGDSLAVPTFECDTDVCGTVGLQDLTDAVNFTTRLETKRGFGPRICVKKGYAAFRGSYMAAEDSLKKLIVQY

Ga0210107_1068360

Ga0210107_10683602

F059979

MKSFFLILAQLSLVTLVYVFAYRAGYRSAQSKAVSVVKKFADPVACLLDSLSETIDESIS

Ga0210107_1069673

Ga0210107_10696731

F099818

MGLERRGRVIVTGLGPTGHAGRSPLVQWKAAAFVRWQEPDDARVSSPDVRPAKAGM

Ga0210107_1074131

Ga0210107_10741311

F103291

VILQNFLGWLKSKEDYDIKNALASTIIAFIVGITIIGPQIEAIQDQMLSELSELTIFASLIASIAGFDVLTKNVFKIANSKIHLQNKPI

Ga0210107_1085883

Ga0210107_10858831

F009170

QTERRLLELGQPIPALGRQAQQVLEQANELTTGQRERLTGELTTALHAQEQIRHQSQRLTQGKKLRQCKIVNAYDPTIAPILKGKSNCPTQFGRKPGIMAEPATGFLFAALVPAGNPSDVSYVVPLLDKVQGAIQRVTTTPKRQVHSVAGDLGINDATLRHTLHARGILTV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300026352: Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqC_D2 (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences