Sample 3300025969

Overview

Basic Information
IMG/M Taxon OID	3300025969 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0111376 \| Gp0101401 \| Ga0210080
Sample Name	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_CordB_D2 (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	97023445
Sequencing Scaffolds	24
Novel Protein Genes	26
Associated Families	24

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	1
All Organisms → cellular organisms → Bacteria	4
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3
Not Available	11
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium PC51MH44	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands → Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	USA: San Francisco Bay, California
Coordinates	Lat. (^o)	38.13147	Long. (^o)	-122.265465	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F004052	Metagenome / Metatranscriptome	455	Y
F005564	Metagenome / Metatranscriptome	396	Y
F008223	Metagenome / Metatranscriptome	337	Y
F009540	Metagenome / Metatranscriptome	316	Y
F012874	Metagenome / Metatranscriptome	276	Y
F016664	Metagenome / Metatranscriptome	245	Y
F042909	Metagenome	157	Y
F045180	Metagenome	153	Y
F046383	Metagenome / Metatranscriptome	151	Y
F048676	Metagenome / Metatranscriptome	148	Y
F053305	Metagenome / Metatranscriptome	141	Y
F054044	Metagenome / Metatranscriptome	140	Y
F054877	Metagenome / Metatranscriptome	139	Y
F058158	Metagenome / Metatranscriptome	135	Y
F070131	Metagenome / Metatranscriptome	123	Y
F072360	Metagenome / Metatranscriptome	121	Y
F072876	Metagenome	121	Y
F074893	Metagenome / Metatranscriptome	119	Y
F078289	Metagenome / Metatranscriptome	116	N
F087210	Metagenome / Metatranscriptome	110	Y
F092076	Metagenome / Metatranscriptome	107	Y
F093888	Metagenome / Metatranscriptome	106	Y
F099324	Metagenome / Metatranscriptome	103	Y
F099975	Metagenome / Metatranscriptome	103	Y

Family

Category

Number of Sequences

3D Structure?

F004052

Metagenome / Metatranscriptome

455

F005564

Metagenome / Metatranscriptome

396

F008223

Metagenome / Metatranscriptome

337

F009540

Metagenome / Metatranscriptome

316

F012874

Metagenome / Metatranscriptome

276

F016664

Metagenome / Metatranscriptome

245

F042909

Metagenome

157

F045180

Metagenome

153

F046383

Metagenome / Metatranscriptome

151

F048676

Metagenome / Metatranscriptome

148

F053305

Metagenome / Metatranscriptome

141

F054044

Metagenome / Metatranscriptome

140

F054877

Metagenome / Metatranscriptome

139

F058158

Metagenome / Metatranscriptome

135

F070131

Metagenome / Metatranscriptome

123

F072360

Metagenome / Metatranscriptome

121

F072876

Metagenome

121

F074893

Metagenome / Metatranscriptome

119

F078289

Metagenome / Metatranscriptome

116

F087210

Metagenome / Metatranscriptome

110

F092076

Metagenome / Metatranscriptome

107

F093888

Metagenome / Metatranscriptome

106

F099324

Metagenome / Metatranscriptome

103

F099975

Metagenome / Metatranscriptome

103

Scaffold	Taxonomy	Length	IMG/M Link
Ga0210080_1000610	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	4103	Open in IMG/M
Ga0210080_1001229	All Organisms → cellular organisms → Bacteria	3035	Open in IMG/M
Ga0210080_1001443	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	2830	Open in IMG/M
Ga0210080_1001812	All Organisms → cellular organisms → Bacteria	2557	Open in IMG/M
Ga0210080_1002576	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2196	Open in IMG/M
Ga0210080_1003589	Not Available	1885	Open in IMG/M
Ga0210080_1003973	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1803	Open in IMG/M
Ga0210080_1004268	Not Available	1744	Open in IMG/M
Ga0210080_1008092	Not Available	1309	Open in IMG/M
Ga0210080_1015646	Not Available	971	Open in IMG/M
Ga0210080_1016811	Not Available	939	Open in IMG/M
Ga0210080_1017757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	915	Open in IMG/M
Ga0210080_1019296	All Organisms → cellular organisms → Bacteria → Proteobacteria	881	Open in IMG/M
Ga0210080_1021171	Not Available	842	Open in IMG/M
Ga0210080_1024848	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
Ga0210080_1025250	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	775	Open in IMG/M
Ga0210080_1030664	Not Available	707	Open in IMG/M
Ga0210080_1035240	Not Available	662	Open in IMG/M
Ga0210080_1036514	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium PC51MH44	650	Open in IMG/M
Ga0210080_1044669	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
Ga0210080_1046143	Not Available	581	Open in IMG/M
Ga0210080_1047865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	571	Open in IMG/M
Ga0210080_1049437	Not Available	562	Open in IMG/M
Ga0210080_1054226	Not Available	537	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0210080_1000610

All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis

4103

Open in IMG/M

Ga0210080_1001229

All Organisms → cellular organisms → Bacteria

3035

Open in IMG/M

Ga0210080_1001443

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter

2830

Open in IMG/M

Ga0210080_1001812

All Organisms → cellular organisms → Bacteria

2557

Open in IMG/M

Ga0210080_1002576

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

2196

Open in IMG/M

Ga0210080_1003589

Not Available

1885

Open in IMG/M

Ga0210080_1003973

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

1803

Open in IMG/M

Ga0210080_1004268

Not Available

1744

Open in IMG/M

Ga0210080_1008092

Not Available

1309

Open in IMG/M

Ga0210080_1015646

Not Available

971

Open in IMG/M

Ga0210080_1016811

Not Available

939

Open in IMG/M

Ga0210080_1017757

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium

915

Open in IMG/M

Ga0210080_1019296

All Organisms → cellular organisms → Bacteria → Proteobacteria

881

Open in IMG/M

Ga0210080_1021171

Not Available

842

Open in IMG/M

Ga0210080_1024848

All Organisms → cellular organisms → Bacteria

781

Open in IMG/M

Ga0210080_1025250

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

775

Open in IMG/M

Ga0210080_1030664

Not Available

707

Open in IMG/M

Ga0210080_1035240

Not Available

662

Open in IMG/M

Ga0210080_1036514

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium PC51MH44

650

Open in IMG/M

Ga0210080_1044669

All Organisms → cellular organisms → Bacteria

590

Open in IMG/M

Ga0210080_1046143

Not Available

581

Open in IMG/M

Ga0210080_1047865

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium

571

Open in IMG/M

Ga0210080_1049437

Not Available

562

Open in IMG/M

Ga0210080_1054226

Not Available

537

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0210080_1000610	Ga0210080_10006101	F012874	VRNSVMPAKAGIQNYLKTLDSRLRGNDAKGRFKTFYETIRKGGRL
Ga0210080_1001229	Ga0210080_10012293	F042909	MVEFLTFIGSLNLGTFIVIWTSTIFLVIFISLLLAYVSQMNKETIRLSKNVKILIEELSEKNLKLGDDDL
Ga0210080_1001229	Ga0210080_10012294	F093888	MMIYNLFQQLSNVTGMTPLASICALVIIFSLTLFGILILIRVRNIKKVLNNLNDGLDIISQKLGRQSMEFKKIQPNRHKLGSHINNEIAAGGRASLEAGNGAVIAQKNGSEEHRINTEIGTKIQALLKKSGKPTPYHDLTKHLSKDYPDYDYDFFLKEVEDLQKEGKVEVQLIAGKLYFQIKKT
Ga0210080_1001443	Ga0210080_10014431	F099324	MFKQIIFVIMLGWVLVLSGCAAIDKDHNIEGEDYRGGYPPRGGYTRTSPHKALVSEACNIEANNLAGDKDFMADDRARRVYFSQCMQRNGYNAAGNYVGIPPK
Ga0210080_1001812	Ga0210080_10018123	F054044	MISKYYSNSDIFSVPADRLGISHTVGVLVLVFALTALILLFVDSSFRSAPDQEECLQLVRALGLNSLSLAPSGRPLRNPGAIDPSIDLRFGPKFGRLPIDGADLF
Ga0210080_1002576	Ga0210080_10025761	F099975	KFKEINKLRGGVLVYAAQAIPPIDAEIAEKGHLWTETT
Ga0210080_1003589	Ga0210080_10035891	F005564	MENDMNKIFIALMIIFFVGDPGMETLYWLGDIKNYVVAGAFALCSMPFIISQLDG
Ga0210080_1003973	Ga0210080_10039734	F058158	MRKSYMSDFTKTEKDDIDIWELHVKEREYILAQIANDRRTSRIRNWIELIFMLGFIYYMLYDIYKDEGLDTIFKFLKI
Ga0210080_1004268	Ga0210080_10042681	F074893	MGPGQLHAVAGDGALTIRINGPMDLLLTMPLREYCHNSGAAYRSYIVDFQNVSIVRDSGLALLLMLKRWTNRAGATLSVINGNRDLMRRCFSLGIGPA
Ga0210080_1008092	Ga0210080_10080922	F046383	MKSSFIALIQGILLGWTFIPGSAQACDPEQDGCLGCNDEELPVCLNLFVQEVCQSFGNLGNCDAPRIYDDVERHVLISTGSHMSHIRSMIRNPRKYQLR
Ga0210080_1015646	Ga0210080_10156461	F070131	MMGKMLTKIGIIGVFAFCFLLQVDLAGGDNRAYGQNKQKSNVPMEIELHFSSTPMLNEYTVLYVEIRALKDAPNTLIEIEIPSDGFELISGNTQLHEDLSSGSTTLYQLEVLPVALGQYKIAASAISGETDYIFGKREELYVNIGEEFSELSKSSFIPEIADNRSGATKIGNFSEPPTQVLPDQKPGEGQEDFYLAAPGPGEIVVRGYWLYQDKGGADRPLRDARVEIWDADSSGDTLL
Ga0210080_1016811	Ga0210080_10168112	F048676	SCLCGTASDAVDAVKSEIPQGFKLLKFKMSEYLKNIVKLTISKI
Ga0210080_1017757	Ga0210080_10177571	F016664	MEQAIHNRENEPAHSVEIVVHISENLEEQQRRNLITELNTNTGIVAAEFCPLRYHLMLVRYDRHQHSSQDVLSAVSGQKLQARLIGPI
Ga0210080_1019296	Ga0210080_10192962	F008223	MQLFKRLFRKRPRQPSAGEQAAAVLHRFTTATIMGVDREDLGRYPAKQRKVMAFHYGAIRCLAREFALDETETLAVFVMFVNRYFNLPVSETGSISERLQGFQDNPEERRYLVAGEDVFRRWHEQGERRAPLELGEMLQA
Ga0210080_1021171	Ga0210080_10211711	F078289	MKTAVSIFILIFVVFPLYGFNSLVRHEDIPKMRELGISQEVIQYIISNQTSSVSSEDVIKMKQSGLNNNDIMSAIKSDLYRPEQKSTSMKEVELIAKLKESGMSDEAVLQFIQTVKSTRRVDSDGNVTKQYTNESQRTQYPTTGATFPKLDNYGYDPSNGRFLFFIKPQNQE
Ga0210080_1022555	Ga0210080_10225553	F087210	MRFLSGALALASAETALAHTPDTGFLDNFSHQLTSLHHSPAAMLLGVLVLALLLVAVRALKT
Ga0210080_1024848	Ga0210080_10248482	F008223	TSNACAAGSEKMNLFTRLFRKQPQPPSPGEEATAILHRFTTATIMGVDREDLGRYPAKQRKVMAFHYGAIRCLAREFNLDETETLAVFVMFVTKYFNLPVSETGSISERLQGFQDNPDERRYLAAGEDVFRRWHDQGERRAPLELGEMLQA
Ga0210080_1025250	Ga0210080_10252502	F092076	LDGQISIIKLGAMFSHKIDKLQEIIFTQASGTPTTVTMMDHIQNVMNDPDFDAKYNSIIVLEEHTHIAGVPTEKIETIRRVLDGYAQQRTGRNWAVVAPNERLEAFVKLNLELISPVIFNIRIFRSEEDALNWIKGR
Ga0210080_1030664	Ga0210080_10306642	F054877	MKPVKSLRVLARYCPKTTDDLEPELSNLVGTEAVFSYHRYMDEDDTPYSNQWVLTAEDQRFGDYWFPECDLNILQEMHSA
Ga0210080_1035240	Ga0210080_10352401	F008223	MKLFSRLFSKKPAAPSPVEEVSRILERFATATSMGVDREDLSRYPAKQRQVMAFHFGAIEYLAREFQLDETQMLGVFVVFLDNYFIMPITESGSISERVQGFYDKPQEREYLEAGADIFRRWHKLNERRAPLQLGEMLKAS
Ga0210080_1036514	Ga0210080_10365141	F072360	GFFSNMLLSGMNRKLDILMVFSHKALCIAFTLLITLSLSAGGVLANSCQGGPDCINCATAVHPHIPGMDMEMVNQGCQSAEQNSSCGFKSSTSADDFYSMAAVVKSCTQPYFGIFTAASDESDQTHLFQKLISQFQYPYRGELTPIYLLNLSLLC
Ga0210080_1044669	Ga0210080_10446691	F072876	MEMSKQSYSDVMAMPVKRFQDYMKWKTDLEEEKQKMLLEGVGKKK
Ga0210080_1046143	Ga0210080_10461431	F053305	MLKKSVSMGLMALFVFSFIAVATVSADETQKITGTVMSVNVETGEVIVKDDAGEMKSLMADPKAEGAVDLKMLKEGDPVSVESDSNGVIKSLKAGE
Ga0210080_1047865	Ga0210080_10478651	F045180	PLVPDASLRQLKRAVRPLFSPELTWSELAAFFVGWLVVAQAVFHLARRQRSVDTFLVVIAVVLVGRTFTSGNTLAVAELAAIALLLPVLVLMSRIEDRGRSALIAAALGTWLVAVALAPVLAESHRAVAELPEVGEYLRRNAPPASQLAGKAFSYVALAWLLAGTGLLPHVAAGVTVLFVLLLGLLHVGA
Ga0210080_1049437	Ga0210080_10494371	F009540	FSGPLGAAASVQFLHGLGADVREDGGRVKAVCALPIPYCAQGFLIRADAGSGGGKLSLGVGARARVEEEDFNGTVGVALRAAFVRTWGHPIGTEPGVSYLGPELDLAILRVNVTLGVLWRVSGHGGKSALFSWGLGFGI
Ga0210080_1054226	Ga0210080_10542261	F004052	PPNMRILTLIVQLALTAFIVSCDQQHSAADIDPMLGVECFESHRTSFPPGTQYEGIEKLADNTLTIRIMNGVDVVTLDCRLNPDGTLQGAGK

Scaffold ID

Protein ID

Family

Sequence

Ga0210080_1000610

Ga0210080_10006101

F012874

VRNSVMPAKAGIQNYLKTLDSRLRGNDAKGRFKTFYETIRKGGRL

Ga0210080_1001229

Ga0210080_10012293

F042909

MVEFLTFIGSLNLGTFIVIWTSTIFLVIFISLLLAYVSQMNKETIRLSKNVKILIEELSEKNLKLGDDDL

Ga0210080_1001229

Ga0210080_10012294

F093888

MMIYNLFQQLSNVTGMTPLASICALVIIFSLTLFGILILIRVRNIKKVLNNLNDGLDIISQKLGRQSMEFKKIQPNRHKLGSHINNEIAAGGRASLEAGNGAVIAQKNGSEEHRINTEIGTKIQALLKKSGKPTPYHDLTKHLSKDYPDYDYDFFLKEVEDLQKEGKVEVQLIAGKLYFQIKKT

Ga0210080_1001443

Ga0210080_10014431

F099324

MFKQIIFVIMLGWVLVLSGCAAIDKDHNIEGEDYRGGYPPRGGYTRTSPHKALVSEACNIEANNLAGDKDFMADDRARRVYFSQCMQRNGYNAAGNYVGIPPK

Ga0210080_1001812

Ga0210080_10018123

F054044

MISKYYSNSDIFSVPADRLGISHTVGVLVLVFALTALILLFVDSSFRSAPDQEECLQLVRALGLNSLSLAPSGRPLRNPGAIDPSIDLRFGPKFGRLPIDGADLF

Ga0210080_1002576

Ga0210080_10025761

F099975

KFKEINKLRGGVLVYAAQAIPPIDAEIAEKGHLWTETT

Ga0210080_1003589

Ga0210080_10035891

F005564

MENDMNKIFIALMIIFFVGDPGMETLYWLGDIKNYVVAGAFALCSMPFIISQLDG

Ga0210080_1003973

Ga0210080_10039734

F058158

MRKSYMSDFTKTEKDDIDIWELHVKEREYILAQIANDRRTSRIRNWIELIFMLGFIYYMLYDIYKDEGLDTIFKFLKI

Ga0210080_1004268

Ga0210080_10042681

F074893

MGPGQLHAVAGDGALTIRINGPMDLLLTMPLREYCHNSGAAYRSYIVDFQNVSIVRDSGLALLLMLKRWTNRAGATLSVINGNRDLMRRCFSLGIGPA

Ga0210080_1008092

Ga0210080_10080922

F046383

MKSSFIALIQGILLGWTFIPGSAQACDPEQDGCLGCNDEELPVCLNLFVQEVCQSFGNLGNCDAPRIYDDVERHVLISTGSHMSHIRSMIRNPRKYQLR

Ga0210080_1015646

Ga0210080_10156461

F070131

MMGKMLTKIGIIGVFAFCFLLQVDLAGGDNRAYGQNKQKSNVPMEIELHFSSTPMLNEYTVLYVEIRALKDAPNTLIEIEIPSDGFELISGNTQLHEDLSSGSTTLYQLEVLPVALGQYKIAASAISGETDYIFGKREELYVNIGEEFSELSKSSFIPEIADNRSGATKIGNFSEPPTQVLPDQKPGEGQEDFYLAAPGPGEIVVRGYWLYQDKGGADRPLRDARVEIWDADSSGDTLL

Ga0210080_1016811

Ga0210080_10168112

F048676

SCLCGTASDAVDAVKSEIPQGFKLLKFKMSEYLKNIVKLTISKI

Ga0210080_1017757

Ga0210080_10177571

F016664

MEQAIHNRENEPAHSVEIVVHISENLEEQQRRNLITELNTNTGIVAAEFCPLRYHLMLVRYDRHQHSSQDVLSAVSGQKLQARLIGPI

Ga0210080_1019296

Ga0210080_10192962

F008223

MQLFKRLFRKRPRQPSAGEQAAAVLHRFTTATIMGVDREDLGRYPAKQRKVMAFHYGAIRCLAREFALDETETLAVFVMFVNRYFNLPVSETGSISERLQGFQDNPEERRYLVAGEDVFRRWHEQGERRAPLELGEMLQA

Ga0210080_1021171

Ga0210080_10211711

F078289

MKTAVSIFILIFVVFPLYGFNSLVRHEDIPKMRELGISQEVIQYIISNQTSSVSSEDVIKMKQSGLNNNDIMSAIKSDLYRPEQKSTSMKEVELIAKLKESGMSDEAVLQFIQTVKSTRRVDSDGNVTKQYTNESQRTQYPTTGATFPKLDNYGYDPSNGRFLFFIKPQNQE

Ga0210080_1022555

Ga0210080_10225553

F087210

MRFLSGALALASAETALAHTPDTGFLDNFSHQLTSLHHSPAAMLLGVLVLALLLVAVRALKT

Ga0210080_1024848

Ga0210080_10248482

F008223

TSNACAAGSEKMNLFTRLFRKQPQPPSPGEEATAILHRFTTATIMGVDREDLGRYPAKQRKVMAFHYGAIRCLAREFNLDETETLAVFVMFVTKYFNLPVSETGSISERLQGFQDNPDERRYLAAGEDVFRRWHDQGERRAPLELGEMLQA

Ga0210080_1025250

Ga0210080_10252502

F092076

LDGQISIIKLGAMFSHKIDKLQEIIFTQASGTPTTVTMMDHIQNVMNDPDFDAKYNSIIVLEEHTHIAGVPTEKIETIRRVLDGYAQQRTGRNWAVVAPNERLEAFVKLNLELISPVIFNIRIFRSEEDALNWIKGR

Ga0210080_1030664

Ga0210080_10306642

F054877

MKPVKSLRVLARYCPKTTDDLEPELSNLVGTEAVFSYHRYMDEDDTPYSNQWVLTAEDQRFGDYWFPECDLNILQEMHSA

Ga0210080_1035240

Ga0210080_10352401

F008223

MKLFSRLFSKKPAAPSPVEEVSRILERFATATSMGVDREDLSRYPAKQRQVMAFHFGAIEYLAREFQLDETQMLGVFVVFLDNYFIMPITESGSISERVQGFYDKPQEREYLEAGADIFRRWHKLNERRAPLQLGEMLKAS

Ga0210080_1036514

Ga0210080_10365141

F072360

GFFSNMLLSGMNRKLDILMVFSHKALCIAFTLLITLSLSAGGVLANSCQGGPDCINCATAVHPHIPGMDMEMVNQGCQSAEQNSSCGFKSSTSADDFYSMAAVVKSCTQPYFGIFTAASDESDQTHLFQKLISQFQYPYRGELTPIYLLNLSLLC

Ga0210080_1044669

Ga0210080_10446691

F072876

MEMSKQSYSDVMAMPVKRFQDYMKWKTDLEEEKQKMLLEGVGKKK

Ga0210080_1046143

Ga0210080_10461431

F053305

MLKKSVSMGLMALFVFSFIAVATVSADETQKITGTVMSVNVETGEVIVKDDAGEMKSLMADPKAEGAVDLKMLKEGDPVSVESDSNGVIKSLKAGE

Ga0210080_1047865

Ga0210080_10478651

F045180

PLVPDASLRQLKRAVRPLFSPELTWSELAAFFVGWLVVAQAVFHLARRQRSVDTFLVVIAVVLVGRTFTSGNTLAVAELAAIALLLPVLVLMSRIEDRGRSALIAAALGTWLVAVALAPVLAESHRAVAELPEVGEYLRRNAPPASQLAGKAFSYVALAWLLAGTGLLPHVAAGVTVLFVLLLGLLHVGA

Ga0210080_1049437

Ga0210080_10494371

F009540

FSGPLGAAASVQFLHGLGADVREDGGRVKAVCALPIPYCAQGFLIRADAGSGGGKLSLGVGARARVEEEDFNGTVGVALRAAFVRTWGHPIGTEPGVSYLGPELDLAILRVNVTLGVLWRVSGHGGKSALFSWGLGFGI

Ga0210080_1054226

Ga0210080_10542261

F004052

PPNMRILTLIVQLALTAFIVSCDQQHSAADIDPMLGVECFESHRTSFPPGTQYEGIEKLADNTLTIRIMNGVDVVTLDCRLNPDGTLQGAGK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300025969: Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_CordB_D2 (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences