NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Sample 3300021909

3300021909: Metatranscriptome of freshwater microbial communities from post-fracked creek in Pennsylvania, United States - NH:C (Metagenome Metatranscriptome)



Overview

Basic Information
IMG/M Taxon OID3300021909 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0114818 | Gp0238659 | Ga0213846
Sample NameMetatranscriptome of freshwater microbial communities from post-fracked creek in Pennsylvania, United States - NH:C (Metagenome Metatranscriptome)
Sequencing StatusPermanent Draft
Sequencing CenterDOE Joint Genome Institute (JGI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size61557762
Sequencing Scaffolds88
Novel Protein Genes91
Associated Families74

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available75
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila4
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. DOA91
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Alismatales → Araceae → Pothoideae → Potheae → Anthurium → Anthurium amnicola1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameFreshwater And Sediment Microbial Communities From Various Areas In North America, Analyzing Microbe Dynamics In Response To Fracking
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds → Freshwater And Sediment Microbial Communities From Various Areas In North America, Analyzing Microbe Dynamics In Response To Fracking

Alternative Ecosystem Assignments
Environment Ontology (ENVO)freshwater biomestreamfresh water
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationUSA: Pennsylvania
CoordinatesLat. (o)41.5933Long. (o)-78.514Alt. (m)N/ADepth (m)N/A
Location on Map
Zoom:    Powered by OpenStreetMap ©


Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F000203Metagenome / Metatranscriptome1619Y
F000396Metagenome / Metatranscriptome1185Y
F000817Metagenome / Metatranscriptome879Y
F001024Metagenome / Metatranscriptome803Y
F001233Metagenome / Metatranscriptome741Y
F001296Metagenome / Metatranscriptome728Y
F001346Metagenome / Metatranscriptome718Y
F001380Metagenome / Metatranscriptome709Y
F001418Metagenome / Metatranscriptome698Y
F002557Metagenome / Metatranscriptome548Y
F003497Metagenome / Metatranscriptome483Y
F003556Metagenome / Metatranscriptome479Y
F004178Metagenome / Metatranscriptome449Y
F004452Metagenome / Metatranscriptome437Y
F005001Metagenome / Metatranscriptome415Y
F005410Metagenome / Metatranscriptome401Y
F005880Metagenome / Metatranscriptome387Y
F006508Metagenome / Metatranscriptome371Y
F007847Metagenome / Metatranscriptome343Y
F008133Metagenome / Metatranscriptome338Y
F008512Metagenome / Metatranscriptome332Y
F009606Metagenome / Metatranscriptome315Y
F010294Metagenome / Metatranscriptome305Y
F010305Metagenome / Metatranscriptome305Y
F010923Metagenome / Metatranscriptome297Y
F012875Metagenome / Metatranscriptome276Y
F012876Metagenome / Metatranscriptome276Y
F015340Metagenome / Metatranscriptome255Y
F015378Metagenome / Metatranscriptome255Y
F016975Metagenome / Metatranscriptome243Y
F018692Metagenome / Metatranscriptome233Y
F018722Metagenome / Metatranscriptome233Y
F020700Metagenome / Metatranscriptome222Y
F022652Metagenome / Metatranscriptome213Y
F023505Metagenome / Metatranscriptome209Y
F026908Metagenome / Metatranscriptome196Y
F030438Metagenome / Metatranscriptome185Y
F030679Metagenome / Metatranscriptome184Y
F031875Metagenome / Metatranscriptome181N
F035599Metagenome / Metatranscriptome171Y
F036023Metagenome / Metatranscriptome171Y
F036126Metagenome / Metatranscriptome170Y
F036359Metagenome / Metatranscriptome170Y
F037019Metagenome / Metatranscriptome168Y
F038530Metagenome / Metatranscriptome165Y
F041060Metagenome / Metatranscriptome160Y
F044936Metagenome / Metatranscriptome153N
F048323Metagenome / Metatranscriptome148Y
F052605Metagenome / Metatranscriptome142Y
F054425Metagenome / Metatranscriptome140Y
F055457Metagenome / Metatranscriptome138N
F056597Metagenome / Metatranscriptome137Y
F057922Metagenome / Metatranscriptome135N
F059539Metagenome / Metatranscriptome133N
F060965Metagenome / Metatranscriptome132Y
F062739Metagenome / Metatranscriptome130Y
F063716Metagenome / Metatranscriptome129Y
F063944Metagenome / Metatranscriptome129Y
F065468Metagenome / Metatranscriptome127Y
F065493Metagenome / Metatranscriptome127Y
F065812Metagenome / Metatranscriptome127Y
F067295Metagenome / Metatranscriptome125N
F068474Metagenome / Metatranscriptome124Y
F069751Metagenome / Metatranscriptome123N
F079648Metagenome / Metatranscriptome115N
F080934Metagenome / Metatranscriptome114Y
F082273Metagenome / Metatranscriptome113Y
F084293Metagenome / Metatranscriptome112Y
F085182Metagenome / Metatranscriptome111Y
F088337Metagenome / Metatranscriptome109N
F095062Metagenome / Metatranscriptome105Y
F096734Metagenome / Metatranscriptome104N
F099716Metagenome / Metatranscriptome103N
F100011Metagenome / Metatranscriptome103Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0213846_1001754Not Available566Open in IMG/M
Ga0213846_1002381All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium518Open in IMG/M
Ga0213846_1006216Not Available809Open in IMG/M
Ga0213846_1007266Not Available575Open in IMG/M
Ga0213846_1011462All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae590Open in IMG/M
Ga0213846_1013173All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia808Open in IMG/M
Ga0213846_1013505Not Available556Open in IMG/M
Ga0213846_1016374Not Available741Open in IMG/M
Ga0213846_1018613Not Available521Open in IMG/M
Ga0213846_1018841Not Available581Open in IMG/M
Ga0213846_1019583Not Available534Open in IMG/M
Ga0213846_1024013Not Available534Open in IMG/M
Ga0213846_1024131Not Available655Open in IMG/M
Ga0213846_1024150All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae542Open in IMG/M
Ga0213846_1025197Not Available961Open in IMG/M
Ga0213846_1026057Not Available657Open in IMG/M
Ga0213846_1028108Not Available510Open in IMG/M
Ga0213846_1032665Not Available516Open in IMG/M
Ga0213846_1033789Not Available513Open in IMG/M
Ga0213846_1037012Not Available603Open in IMG/M
Ga0213846_1040537Not Available506Open in IMG/M
Ga0213846_1041086Not Available705Open in IMG/M
Ga0213846_1042425Not Available546Open in IMG/M
Ga0213846_1042768Not Available593Open in IMG/M
Ga0213846_1046014Not Available629Open in IMG/M
Ga0213846_1048164All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi504Open in IMG/M
Ga0213846_1048670All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila670Open in IMG/M
Ga0213846_1051176Not Available504Open in IMG/M
Ga0213846_1051572Not Available808Open in IMG/M
Ga0213846_1051844Not Available579Open in IMG/M
Ga0213846_1053271Not Available624Open in IMG/M
Ga0213846_1053709Not Available742Open in IMG/M
Ga0213846_1054133Not Available727Open in IMG/M
Ga0213846_1054235Not Available513Open in IMG/M
Ga0213846_1054787Not Available715Open in IMG/M
Ga0213846_1055085Not Available510Open in IMG/M
Ga0213846_1057285Not Available542Open in IMG/M
Ga0213846_1060358Not Available582Open in IMG/M
Ga0213846_1062046Not Available557Open in IMG/M
Ga0213846_1062854Not Available777Open in IMG/M
Ga0213846_1063591Not Available501Open in IMG/M
Ga0213846_1065605Not Available710Open in IMG/M
Ga0213846_1066248All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila808Open in IMG/M
Ga0213846_1068572Not Available558Open in IMG/M
Ga0213846_1069103Not Available544Open in IMG/M
Ga0213846_1073924Not Available529Open in IMG/M
Ga0213846_1075482Not Available581Open in IMG/M
Ga0213846_1077059Not Available506Open in IMG/M
Ga0213846_1080650Not Available520Open in IMG/M
Ga0213846_1083319Not Available661Open in IMG/M
Ga0213846_1084545Not Available569Open in IMG/M
Ga0213846_1091300Not Available793Open in IMG/M
Ga0213846_1092056All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1033Open in IMG/M
Ga0213846_1092625Not Available519Open in IMG/M
Ga0213846_1092672Not Available533Open in IMG/M
Ga0213846_1093259Not Available519Open in IMG/M
Ga0213846_1096504Not Available576Open in IMG/M
Ga0213846_1099468Not Available545Open in IMG/M
Ga0213846_1100278Not Available504Open in IMG/M
Ga0213846_1101476Not Available657Open in IMG/M
Ga0213846_1102183Not Available549Open in IMG/M
Ga0213846_1103299Not Available639Open in IMG/M
Ga0213846_1104247Not Available648Open in IMG/M
Ga0213846_1105168All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila780Open in IMG/M
Ga0213846_1105901Not Available664Open in IMG/M
Ga0213846_1107432Not Available614Open in IMG/M
Ga0213846_1111203Not Available626Open in IMG/M
Ga0213846_1111945Not Available808Open in IMG/M
Ga0213846_1120380All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. DOA9629Open in IMG/M
Ga0213846_1121133Not Available704Open in IMG/M
Ga0213846_1121363Not Available586Open in IMG/M
Ga0213846_1122589Not Available584Open in IMG/M
Ga0213846_1122955Not Available607Open in IMG/M
Ga0213846_1122978Not Available569Open in IMG/M
Ga0213846_1123692Not Available789Open in IMG/M
Ga0213846_1124708Not Available530Open in IMG/M
Ga0213846_1124803Not Available807Open in IMG/M
Ga0213846_1124890Not Available502Open in IMG/M
Ga0213846_1125134Not Available572Open in IMG/M
Ga0213846_1126674Not Available719Open in IMG/M
Ga0213846_1128512Not Available579Open in IMG/M
Ga0213846_1129591Not Available501Open in IMG/M
Ga0213846_1129920All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi592Open in IMG/M
Ga0213846_1131250Not Available769Open in IMG/M
Ga0213846_1131515Not Available817Open in IMG/M
Ga0213846_1131580All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila807Open in IMG/M
Ga0213846_1133660All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Alismatales → Araceae → Pothoideae → Potheae → Anthurium → Anthurium amnicola733Open in IMG/M
Ga0213846_1133700Not Available583Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0213846_1001754Ga0213846_10017541F012875PGFTARLSEPPACSALDPQADIPKSTFAARRRRFSACAGSMQQMLPQRTYIRPEPETRNGLSLARNDAFATITRSMFLACPFESTYKLCADPFDRRLSTRFGFEAATGRIHHPRPVIHASLTRSRDATPSPLPFGLFRPPDQSVQRASSQEARLTGHPICLSLPAALSFDHALDQCSKLRSVLLGYRS
Ga0213846_1002381Ga0213846_10023811F052605TKRAVESKIKIVRFRIIPGDWGKVRSGWLIWLLINRSASFGEAEFTSSSGGVRTPSNANEGLGGEE
Ga0213846_1006216Ga0213846_10062162F001024MRPVTPLAVENGVGKLAANVRQMSARERECGELPSP
Ga0213846_1007266Ga0213846_10072661F004452VCREASILGQRNRPKGSGTAGHSGLLDAVLCAVHAGGEQGWESGHL
Ga0213846_1011462Ga0213846_10114621F065812MGDKLLLRLNKDGKPIEKKYCEGKMKRTLKRGLKDLKSLKRKR
Ga0213846_1013173Ga0213846_10131731F004178MRSKSSHAAESGVGEHTARESEAPNSVRRERARGERP
Ga0213846_1013505Ga0213846_10135051F022652GTIERTTRMLSVRSAAKCALSFACRSPLPPFSLPRVNAANALFGLRTLPEPESRYGLSLSRNDAFAPFRGQSSRPAPSIPHRTPSRVRSIPSSSAPFGFEADPGRSHRLTPVSRANFRRSRDFRPSPLPFRLFRAFRIKVFNWHPPREARLAGLRSPLAPRCGFFRSRPGSTLAVRCAPLDKSFR
Ga0213846_1016374Ga0213846_10163741F000817EQRRSVAFNRLPPEVSRIIPGDWGKAGPGWLAKPLLNRIERFGSGGRIHQFL
Ga0213846_1018613Ga0213846_10186131F065468IKTAGSGERRAIGRVDSVNLSIGIQVNALIGKGPKAPNGSGGLKNGRGRSEGTGQRVCRVEFARFGANQAARRSGQIERVRRRLSDEPKG
Ga0213846_1018841Ga0213846_10188411F044936SLAGSSGSGAVIRRAVIRDYFNAAGSRRKIGLLAKVSFSGWNRVEHYEPEGSKGPEGEWKPEDNGRVHESDLATGLVC
Ga0213846_1019583Ga0213846_10195831F005880FQVTFRQLALRPACTVRTWHPKVARREPFAPRRWFSPAADQCAGACLLSIPVEAHFSMRPFALQRRGLASRPIPETASTFPACIFKAILRSDPARSAPHSRPRSVFFDLAGHDPRMEPVARPDLRTHHSSSSLGSPPGSLDPSGSKPSARLRTTKLTLAGCPIFLRSPQRGNSFNHH
Ga0213846_1024013Ga0213846_10240131F059539PQFGRVLAKLNLRANRNTQVGDRDYMAGKYYSAAYEHRFVPGVKDLLLETAQQMSEKPHFDVRLTKMNEMGGVENIVEKVKNSDVLDPDSFSDYLRDVYGIGLEDLMDAYGRVASGAVGWLDQYTYVDKKGKQHSKHPPRAQVIGGETIEALIAHDI
Ga0213846_1024131Ga0213846_10241311F009606SQPTKGKDNESGRGPNVVRTKAKPKVNPVTGANFEYVSESRIGDSFVVVMAGPSGVQSFTFHHPIGVTDVDDEDWVCTPTADIPSLLARRDDPDEADRKAKRDKHRLDLVVAAGLLEKDDDDGVLNYPGTEVSRQDALAKARAEAKVAVKAEKGKPSPDLYIRFLPKEVQEAETSVRKLLADKKTIQAAETKFPSSGYRTRGGPLADREQEEVEYLS
Ga0213846_1024150Ga0213846_10241502F060965MRYSSINNVKLTLALFMTRFCADNTNYAFALDDLAVAAEPLD
Ga0213846_1025197Ga0213846_10251971F088337DGLVARRIMHRPIRPLDEDSSCLDSCIFRLGQQYVSGLPRTAHPLTAPATKFRVAPILQSIRLCRRRIFELPQISRPSAIPVMKLRVAPTLRCSGITFDESPSRPEHCIFRLYRRWIFELPRISHPSALLVVGSPGYPGLPPSCLASDKFSGLPRFPHLPAPAGCSPSFLGLHPPVLPVVIFRVTPNLRSSG
Ga0213846_1026057Ga0213846_10260571F035599FPFQATDMSNFPFSQALFDILNNLQKKGVTNQRLDVYLKFLGASSYLKTVAGSVVNDKDPGNVSMLDSLIVLSLPTTMTVDSFQNYLGLYGMSYRIPDMNVFFGELLHVFEEVDASAFNNEATSKSSLSVGAATGANVAGQFQIALKIQTGDIAVLKHVITPVTQKVLISKHVGFQAQYDADIQKGYPNFVILSRAAKFAQK
Ga0213846_1028108Ga0213846_10281081F005001IRLSAPRWPFSPAAGSMLPGSPLAASCPEPVARNGFSLARNSCRLSATSIPGSKLLACYFASFQVGFRARSALQLRHRVPVCAGCGGFIACGPLHFHHSVRLAAPAISTPLRDSYLPRDQSIQPRLLPAGPPGESARFPLAPRRPSRLKFGLRIIVPGPLRFRRLAVPQ
Ga0213846_1032665Ga0213846_10326651F001233LRWAAAVNRSTPSISRIIPGDWGKVESGWLAQPLINRTVRFGSGGRIHQFLWRRSRAVSNAKKELCG
Ga0213846_1033789Ga0213846_10337891F036126VNPASPKLALRFLRSQINQPDLTFPQSPGIIRETYNLNLTLSCRF
Ga0213846_1037012Ga0213846_10370121F054425LDGDESGDGSSPSSLSHAGIRRRLGCRLPDAILHGKRSYRPRSRAVQCVAAAGFLSEAFQLASPMIATPACEPGQDTSVISAPRLDRLAQGQPSLLAMRSPCATGLAS
Ga0213846_1040537Ga0213846_10405371F018722MLPAIAVARTEGRMAPAAIFLSPVARDYPSRALEGFFRPSRCD
Ga0213846_1041086Ga0213846_10410861F079648VRRSAKAPLTRFGATLRISVPVGLPDQQTTWASWSFVAFLPLLAASRLSSPPGPVAIKARARYVVFPTRLERRTGIRAGYPVYSPLMPLAEARLQGVPPLVKRRSRRNACLPGCSLLRGFPSPASCSGFPEDPFPALGRRQNTVSRPPRACSADELAAAPCGVRCHLSRALCRPP
Ga0213846_1042425Ga0213846_10424251F008133FQVIRFPARSPPACTALSFAIKSAGRFACLLPYGRFLRPPDQCFQARRLLPLSRDRVARNGLSLSYNGCHLSATSIPGSTFQTCYFAPFQIGFRTRSAFWLHYRVPVCPGHGRFNASGPLHFHHPVRLTAPTISTPPQDFYIPQDQSVQRRLLPAGPPGEFTRFPFAPRSLFFFKSGLRI
Ga0213846_1042768Ga0213846_10427681F008133FQVIRFPARSPPACTALSYAIESAGRFACLLPYERFLRPQDQCFQARRLLPLSRNRVARNGLSLTRNGCRLSATSIPGSEFLTCYFAPFRIGFRARSAFWLRYRVPVCPGHGRFNASSPLHFHLPVRLAAPTVSTPPRDFCIPQDQSVQQRLLPAGPPGEPARFPFAPRSPFLLQVWAMDQRSRSATFPPACCSSNL
Ga0213846_1046014Ga0213846_10460141F008512LLLCISTVRTALAGLSKIKTAQRKTPKGGQKKRTHREEHGNSAGSVKNFRAPAMLKTTPLDCEIKSNLRAKRRDPWPRANAPTKSVADPEPVVKTRMKIAGVS
Ga0213846_1048164Ga0213846_10481641F015378MTETKQTERNIHAHSEHSSYCECIWCVEKANRTARTADHAKSGIEQEMTAMLKDLPLSITIQREADLQGDEYIWQCMGTTGKAYSFVD
Ga0213846_1048670Ga0213846_10486701F038530MRPIAPLAAVSGVGKHTARESEAPNDVRMGKSAWRAPTP
Ga0213846_1051176Ga0213846_10511761F080934FQVTYPTIQLPSGMHGRSCAIQVIVRIASLLLVSNFRPARFNAPKRASRLTPDRDLFLGTAFRSPEKTARYRTTSPRSMFLAYPFGSPSSLSRTRSIQPLIHAIRLAPNRANSLRQTRCPSPSERSRSFFASPLPLGAFWTPPDQSVDPNTNREVHQIETPDFLRSP
Ga0213846_1051572Ga0213846_10515721F031875VLIRSSNLEPLGHCDSSVLETCPDYLTQLAAVSNRDSLPDSSFAFDDVRTPPEEPVNSASPNFRSVQRSRGNQPAPAFPRSPGIILKHTISILFFTAASF
Ga0213846_1051844Ga0213846_10518441F080934FQVTYPTIQLPSGMHGRSCAIWVIVRLASLLPASCFRPARISARKRASRLTPHRSLFLGTAFRSPEKTARFRATFPGSMFLAYPFGSPSSLSRTRSIHPLIHAFRLAPERANSSRRTRCPGPSVRPRSFFRSPLPFRAFWTPPDQSVDPNTNREVHQIETPDLLRSPLPAVLIEPATDHRSRLATSRLAYCL
Ga0213846_1053271Ga0213846_10532711F010294YDGSVGTNGQATYVLNGDGASAYLFAGSVNGTGNSNSIVGASYTNAAFLVNTVVNVSSYVYLSGNFGGVYNVQGIGAGYDGLETNSIEVRTNRSLSFTAAGFYGMGSAVGTIAYTMSLLQDYPTNGVVLSGTGVALIDDNFNGSTLNLNAITQLPLDGRATLQLTRQLTLTQAAQGARSYTAAGTIQVGVN
Ga0213846_1053709Ga0213846_10537092F007847LKRAEKPHSKFSGRKALDGPATRPETPLAVENGVGKLT
Ga0213846_1054133Ga0213846_10541331F010294MNFKKITLSLVCGSVAVAAMGQGLTNRVFTYDGSVGTNGQATYVLNGDGANAYLFAGSVNGTGNSNGIVGASYSNVAFLVNTVVNVSSYVYISGNFGGVYNVQGIGAGIDGSQTNQVEVRTNRSLTFTAAGFYPIGSAIGNIQYTMSLLQDYPTNGVVLSGTGVALADDNFNGATLNLNAITQLPLDGRVTLQLTRQLTLTQAAQGGRSYTAAGTIQVGVN
Ga0213846_1054235Ga0213846_10542351F068474AAFGSAFARNHGSRLFTLKLHFIHSPAVSFLTSPALGSFSRGLPGLRVLPGSYALFVPPFGVFLLAVPTFLFLNPPESSDRADTQ
Ga0213846_1054235Ga0213846_10542352F052605VRFRIIPGDWGKVRSGWLIWLLINRSASFGEAEFTGSSGGVRTPSNANEGLGGEGR
Ga0213846_1054787Ga0213846_10547871F001346VVSAGPVKTFRKAGDGKNATAGLRMKGSLRVKRRDPWHRANAPSKAAADPALSGEDADQQSQACLDLVCKPVAQPPVQAS
Ga0213846_1055085Ga0213846_10550851F085182AGALRFVLQGRETASKAQIEGHAAEESPDSKGRDGG
Ga0213846_1057285Ga0213846_10572853F030679MFVTQSPLPSRELKTLKRPSNFRSPSGLSSFRIVALSQRLGLRSLPWCPARFPFAPRKRQLPFNNYPLSDHRS
Ga0213846_1060358Ga0213846_10603581F062739FQVTRFPARSPPACTALSFAIKSAERFACQLPYERFRRPQDQCLQARRLLPLSRDRVARNGLSLAHNGCRLSATSIPGSTFQTCYFAPFQVPSAPVRLFGSATALRFAPVAAASTPQARCTFTTWFGWPRSRLHSPSGLLPPSGSKRSTAFAACRSAWRIRPISPRSPPPFPFSSIGLRITVPGPLRFRRLAV
Ga0213846_1062046Ga0213846_10620461F000396TPRRHATAQSFAAKDRRVPSLQLPAAFFQKQRLNASGLTCQLSWLEPASRSGLSLSRNECPSPGHHFEVKAPDLLLRHPAVHSSCPFGFRFPHALRFAPARARSLPKSRCLTPVRHSRPFLGSPLPFGAFRTLRDQSVQPDSWPGSSPSERSRLPITPRHRFWFISLDTGSPLQAR
Ga0213846_1062854Ga0213846_10628541F010305LKRAEKPHSKSSRRKALDGPATRPETPLAVENGVGKLTAPEKGAPNVS
Ga0213846_1063591Ga0213846_10635911F095062SQVAFYPQASGSVFTIAGVSEGFHGSCLDPVSSPVRKLTLSRLSASFLWLTPFQRPPESFARADPQ
Ga0213846_1065478Ga0213846_10654782F000203LGVRHALFPVLALGASLGKAASFPTLFSTASGVIGLVAGPFSASRRLNY
Ga0213846_1065605Ga0213846_10656051F006508VALANAPSKAVADQRQMVKTRKRNRRRVLTWFASRWRNHQPKRAEKPHSKSDVVRCQTALPRG
Ga0213846_1066248Ga0213846_10662482F038530MRPTAAHAALSSVGKHPARESEAPNAMRMEKSAWRAPTSD
Ga0213846_1068572Ga0213846_10685721F065468NKPNGTERVWNVDPLLVLPKNSRQRGAKENRAFRFGEPLGWYSGHRFDREGTKTPSGSGGRKNGRDRSEGTGQRVCREEFAPSGANQVAWMSGRVERARRKLSGEPKG
Ga0213846_1069103Ga0213846_10691031F065468NIDPLLVLPKNSRQRGAKEIGRFDSVSLSAGIQVTALIGRGIKAPNGSGGRKNGRDRSEGTGQRVCRDEFAPSGANQTTWMSGQVERARRRLGGEPKG
Ga0213846_1072531Ga0213846_10725311F002557VLIHSSNRLPSGNCDSPGPETCPGYLTELGTVSHRPSLLSPFFAFTDGARTPPEELVNPASATRPCGLALEGQSQPAWL
Ga0213846_1073924Ga0213846_10739241F003497QRSGDAALLLPVTAFIRLRIGAPEPIRLFYLLKASVSERPFARPQRLLSFENHRGEVKAPDLSLRRNSELFFQPVRPCAPTLAGVYHAPGDVRRPKPVAVSRAQNSQTSIQLSLPFGTFVPLDRSAQSAAQSDKLTFMPGPFSLRSPKASITFNNYPLSDHRSRFATVHQAYCSLN
Ga0213846_1075482Ga0213846_10754821F099716MRLQHRGAARLLRVSRILKAREILELSDKQLLQLRDNRVELAQKLIKLTAEIRTVRFGSLNTLATKPVNFENLRKNAKSISDLRLQRRTAVIDAFEKASNVLDDKQKHKLHEFIAEWVDEAYEDETEADEAEE
Ga0213846_1077059Ga0213846_10770591F036023MTRVSLRYAVLALSLTLAVSAFARPKSENITLYHDATLNGANVPAGEYVVKYDTEGPNAQVWFMHGNKQVASATGQVKTLDKKCAASQLVIDTQNNGRSISELDLG
Ga0213846_1080650Ga0213846_10806501F003497GSQRSGDAALLLPVTAFIRLRISAPELIRHFYLLEAFVSERPFARPQRLFSFENHRGEVKAPDLFLRRNSELFFQLVRPCTPTLDDVYHATGDVRRTKPVAVSRAQNSQTSIQLSLPFRTFVPPDRSAQSAARSEKPTLVSGPFSLRSPKASITF
Ga0213846_1083319Ga0213846_10833191F082273ELRWAAAVNRLSPKISRIIPGDWGKDESGWLVHPLINRAARSGSGGRIHQFLWRRSRAVGNAKRNCAVRSDKKPLRTELSTLGKFRAQANGSYPEGIRLLLCISTGE
Ga0213846_1084545Ga0213846_10845451F057922NSPFSDWHAQSELSLQCSGDALLLLPAAAFGRPRIGAPGPICLFYLLEARVSKQTFARPHRLLPFENHRGEVNAPALFLRRNSELFFQPVRPWTPILGCVLTPPGYVRRPKPVAVFQAQSSQTSIQLPLPFRTFILPDRSAQSAARSEKLAFVSGPFSLRSPQALINFVNYALTDHRFRFATVYQAYCS
Ga0213846_1091300Ga0213846_10913002F015340MVKTRKREITNVSLSGSQAGVRKRQPKRAERPHSKFSDRKALNGPAMRPATPLAVENGVGKLAANARQMPAREREHG
Ga0213846_1092056Ga0213846_10920561F060965MRYSSINNVKLTLALFMTRFCADNTNYAFALDDFAVAANPLD
Ga0213846_1092625Ga0213846_10926251F018692VRDLSDQITVVASLAPRQIDRGDVKWPYTLRQKQGSTEAGP
Ga0213846_1092672Ga0213846_10926721F016975MVKTRSEIADVSRPGSRTGGATTSSSELKSLTQNPELPQNGTLDGPATRPKTPLAVENSVGKLAA
Ga0213846_1093259Ga0213846_10932592F010923GRAAGSERKSGGFVRWTGRQQRRLNALIPRDVRVPEGSGDRRRGRPNRVVEVQRARGIEAAATGAIREAVVEPKGRTGMEANLEGSEVAGWEL
Ga0213846_1096504Ga0213846_10965041F001380GNTARFSDPSACGRSLCGRMLRINRSPLATAAFQHAAGHSNKRVFNRLSIPPESDSRYGLSLAHNDASATIARSMFLACTFVSTSKTHANPFDTQLLRSVRFRVRTGAISTPDTRFPHRSPTFPISARSPLPFRSSFENLPDQSVQPVQLQETRLTERPIVSRLPGAKPFDSASDQRSKLASFRLTYRSVN
Ga0213846_1099468Ga0213846_10994681F041060MTPLAVENSVGKLAASLWGAKCQHGKESMANSHPP
Ga0213846_1100278Ga0213846_11002781F065493SAPLKLGFPRLRINASWLAAACLSRLGPATRNGLSLPCDGSRFHEPHSRIDGPDLLLRLPRYKLGCPVRPSAPLPSPVRPGFGRFFASGPLQFRLLLRLAASPISTPLRGFYPPPDQSVRPVSLPVGPPSESARFPLAPRCRSFFKCGRGSPFQVRYVSGGLLFLKP
Ga0213846_1101476Ga0213846_11014761F023505RWETADGRKKIGGFPKIIPGDWGKVESGWLTQPLEAAPQGESWRQNSPVPLAAFARGQ
Ga0213846_1102183Ga0213846_11021831F001296MEVAERRQLLWASKKPLRATGSGQEAASGEPGSIDPWAGENGQRGAERRNVRRSCLRCSMPCMPVVDKAGNQVTWNH
Ga0213846_1103299Ga0213846_11032991F001418QGGTAEAGFTSSSGGVRAPSVNAKKELSDEERLEAAPSRVK
Ga0213846_1104247Ga0213846_11042471F063944DSRPSTKPGTYQKRFVLRSQEEHVKLKSLVVVMLLVLGCSAAFAQSYSFGFLSSSGSREYCNYESFTVGGKGNFYLQGYDVLSACPYSPVAGAAINGFAINVPIAAFAPVHGAAYVYADQLYDAYYGAWTQEQWVVITKLAPGKLQFGKETWAGYVGFFGYEFLGNYGFLTATIPGGSQPTLKTSTINTKSMKALRAAHHAQK
Ga0213846_1105168Ga0213846_11051681F100011MPVFRDCSQSEGEAEPASAFLSPVARDYPSRALRRFFMPATLRL
Ga0213846_1105901Ga0213846_11059011F063716MESDLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQPGSQAGGATTS
Ga0213846_1107432Ga0213846_11074321F030438VRFLCLLPACALQRLRINAPNSACSSNPAWCRLLVTAFRSLATAATSRGLHSKVDVPGLLLRCPTVPLSSPFRLLLHHSQRLRTRCGWLHRSDPLPDICPVSPASPRTSTPLWGCSSPSDQSVQPNLPPVSPPFESARFPLAPRNRFLLLVLRLRITVPGPLRFRRL
Ga0213846_1111203Ga0213846_11112031F084293MADFRKMLFVLAGLLIIISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILISCSGTLIGAQTGPQTLSLYVQGAAITSRQLYTGTAPTS
Ga0213846_1111945Ga0213846_11119451F001024MRPVTPLAVENGVGKLAARVRLMPAWERERGDLPLP
Ga0213846_1120380Ga0213846_11203802F012876TMTITKTTHHFAALALSALMALGVVAGMNGLATAQYAAADSHEMARYGQAHVAVHHVTVVGHRATA
Ga0213846_1121133Ga0213846_11211331F063716MKSNLRVKRRDPWHGANALSKAAADPVLMVETRKKIIGVSQPGSQAGGATTS
Ga0213846_1121363Ga0213846_11213631F005410LARVLPATEFLPSRISAPDRACLLIPDRNPCLGTTFRSLETTARYRATFSRSKLLAYPFGSTLKFHQTRSITSLLHAIWLAPNSANSSRATRCLVPPKLPQPFFNSPLPLGVFTPLPIKAFKLTTGREAHQIETPDFLRSPLPAVFNRTSSGSMFQTRYVPFGLLSNK
Ga0213846_1122589Ga0213846_11225891F001296MEAAERQQPLRESERPLRATGSGQKAASGEPGSIDPEAGENGLRGAERRIVRRFCLRCSMPCMPVVSQAGNQVTWN
Ga0213846_1122955Ga0213846_11229551F096734LQVARSSFTPRSAATILFITQRFGSSFQIRYFLPGSLS
Ga0213846_1122978Ga0213846_11229781F048323YFDSLTGITESESGESSEELKITGRPELHKNDNSKEMKKRVN
Ga0213846_1123692Ga0213846_11236921F012876RNASDHPTEHQEPTMTKTSTQAAALALSVLMTLATVAGMNGIATKQYAKADSLAMAPYGQTHVAVQHVTIVGHRA
Ga0213846_1124708Ga0213846_11247081F037019SPHGPISPTCAGKNSGIEPILQATCSWAWARLGSLSMDRQGAAFPHRRYDRDSFRRDRSPNRVAWRFPDWTAVGFAIPNPFLGSAPLGIPLPEHSRLFGLDPTIDGRLSLHGGQITCGDSNPDCQTRRFFAASSGGLIAGRRLSPCPHLFALHGLSLSESRTELSGAFSYFAGHFR
Ga0213846_1124803Ga0213846_11248031F000817ELRWMAAVNRLKPKVSRIIPGNWGKAESGWLARLLLSWIARFGSGGRIHQFL
Ga0213846_1124890Ga0213846_11248901F056597IFQRGGERRQIGQLAMASFTGWNRAERFEPEGSRGPEGERRLDNRRCVLESDLATGNER
Ga0213846_1125134Ga0213846_11251341F005880QLALRPACTVRTWHPEVARREPFAPHCWFSPAADQCTGACLLSIPVEARFSMRPFALQRRGLASRPIPETASTFPACIFETILRSDPARSAPHSRPRSVFCDLAGHDPRVKPVARPDLRTRDSLSSLGSPPGSLNPSGSKPSVRLRTTKLTLAGCPIFLRSPQRGNSFNRHSAPRIIVPDPLLPARLAVL
Ga0213846_1126674Ga0213846_11266741F002557VLIHSSNHLPSGNCDSLGIETLPSYLTEIGTASHRPFLHSSFFAFTDGARTPTEELVNPASQAQPCDSAQEGL
Ga0213846_1128512Ga0213846_11285123F020700MTARLSLHLRFAQATPKSFSSVFSDAAAGIAAIPIGLNFPVLFQAVRPERGGQFF
Ga0213846_1129591Ga0213846_11295912F001296MEVAERWQLLRASKKPLRATGSGQEAASGEPGSINPWAGENGQRGAERRNVRRSCLRCSMPCMPVVDKAGNQVTW
Ga0213846_1129920Ga0213846_11299201F036359LSLYSNVSSVRYKKLGSYQRRDGVGIMKVLKLGENAKLKHNAADGVALVNQVIITISA
Ga0213846_1131250Ga0213846_11312501F069751VASGQRTAKSGGCPDASGEDADVSHKRVFTWFAGRRRKRQPKRAKRPHSKSSGRKALDGPATRPATPLAVENSVGKLAAIGAQCQHG
Ga0213846_1131515Ga0213846_11315151F026908LVRFASRWRNHQSKRAEKPHSIIEHRKALNGPAMRPNTPLAVENSVGKLAVAAEAGRLMPARERERGELPSP
Ga0213846_1131580Ga0213846_11315801F067295VRRAENPAESTTGIIPGDRGKEGGSWCRPPLPTGNRWRGKITSSSGRCHDRSSDMTQELSGEARTRSRARAESGIREVSIRVPDAVTQRVRAATAQTRTQGRIPAGLKTPAKRPWPAKPVRARKGDVIVGSERDRQIPSNLLDWGGGAKHHHPTASQTQPES
Ga0213846_1133660Ga0213846_11336601F003556VYGDDNMTYTEQDRSGVSAGFEAVSTSIGMKSEVKVVEKREQATFLRKRFVPSVKRTFPVPSFGRVVSKLPVRSNYNKAVSDEDYMSGKLLSAAYEHRHIASLRTLLLGTAEQLSSTPHLDMRNQAMAYKYTAEELRTMTMEAPTVDPDMLGSFLQSVYGIWEPDLVDCYVSVCDGILGFQRVNRNKGKGNDRTLTLAPRVPRALWDTAFESIVTVDVSL
Ga0213846_1133700Ga0213846_11337001F055457MDLTTHPRSRVGAPGLRLQSSPKVLPDPFGPTLPPPFSLLLPHEMRSPHETRCPNQLQDSPFVFEPPLPSRISRSFGIKVLSPIPNSEACLCELPDLPSLPVALKIISYHHALRINVPDPLLPARLTVL

 ⦗Top⦘



© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.