Basic Information | |
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IMG/M Taxon OID | 3300021518 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0131992 | Gp0256634 | Ga0224722 |
Sample Name | Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Balambano_FR1_MetaG |
Sequencing Status | Permanent Draft |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Published? | N |
Use Policy | Restricted |
Note: The use of this dataset is restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of the sequences below requires obtaining a license from the dataset's corresponding author(s).
Dataset Contents | |
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Total Genome Size | 603299675 |
Sequencing Scaffolds | 27 |
Novel Protein Genes | 28 |
Associated Families | 28 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria | 1 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 3 |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 2 |
All Organisms → cellular organisms → Bacteria → Proteobacteria | 1 |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 5 |
Not Available | 5 |
All Organisms → cellular organisms → Bacteria | 3 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium | 1 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 2 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium | 2 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus | 1 |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium | 1 |
Ecosystem Assignment (GOLD) | |
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Name | Freshwater Sediment Microbial Communities From Lake Towuti, South Sulawesi, Indonesia |
Type | Environmental |
Taxonomy | Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment → Freshwater Sediment Microbial Communities From Lake Towuti, South Sulawesi, Indonesia |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | freshwater lake biome → freshwater lake → lake sediment |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Sediment (non-saline) |
Location Information | ||||||||
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Location | Indonesia: South Sulawesi | |||||||
Coordinates | Lat. (o) | -2.651 | Long. (o) | 121.2318 | Alt. (m) | N/A | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F000197 | Metagenome / Metatranscriptome | 1652 | Y |
F001057 | Metagenome / Metatranscriptome | 791 | Y |
F001068 | Metagenome / Metatranscriptome | 787 | Y |
F001844 | Metagenome / Metatranscriptome | 627 | Y |
F002505 | Metagenome / Metatranscriptome | 553 | Y |
F003771 | Metagenome / Metatranscriptome | 469 | Y |
F004167 | Metagenome / Metatranscriptome | 450 | Y |
F004728 | Metagenome / Metatranscriptome | 426 | Y |
F006851 | Metagenome | 363 | Y |
F007038 | Metagenome / Metatranscriptome | 359 | Y |
F009406 | Metagenome / Metatranscriptome | 318 | Y |
F011188 | Metagenome / Metatranscriptome | 294 | Y |
F011630 | Metagenome / Metatranscriptome | 289 | Y |
F025574 | Metagenome / Metatranscriptome | 201 | Y |
F026415 | Metagenome / Metatranscriptome | 198 | Y |
F028447 | Metagenome / Metatranscriptome | 191 | Y |
F036582 | Metagenome / Metatranscriptome | 169 | Y |
F036908 | Metagenome | 169 | Y |
F040773 | Metagenome | 161 | Y |
F041359 | Metagenome | 160 | Y |
F059728 | Metagenome | 133 | Y |
F068909 | Metagenome / Metatranscriptome | 124 | Y |
F070322 | Metagenome | 123 | Y |
F091543 | Metagenome | 107 | Y |
F094045 | Metagenome | 106 | Y |
F097376 | Metagenome / Metatranscriptome | 104 | Y |
F098838 | Metagenome / Metatranscriptome | 103 | Y |
F100598 | Metagenome / Metatranscriptome | 102 | Y |
Scaffold | Taxonomy | Length | IMG/M Link |
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Ga0224722_1001310 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria | 13839 | Open in IMG/M |
Ga0224722_1019143 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 2689 | Open in IMG/M |
Ga0224722_1020336 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 2585 | Open in IMG/M |
Ga0224722_1024658 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2280 | Open in IMG/M |
Ga0224722_1026597 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2173 | Open in IMG/M |
Ga0224722_1029057 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 2052 | Open in IMG/M |
Ga0224722_1032206 | Not Available | 1924 | Open in IMG/M |
Ga0224722_1039020 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 1706 | Open in IMG/M |
Ga0224722_1042578 | All Organisms → cellular organisms → Bacteria | 1615 | Open in IMG/M |
Ga0224722_1043075 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium | 1603 | Open in IMG/M |
Ga0224722_1054594 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1388 | Open in IMG/M |
Ga0224722_1060230 | All Organisms → cellular organisms → Bacteria | 1308 | Open in IMG/M |
Ga0224722_1098320 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium | 981 | Open in IMG/M |
Ga0224722_1118188 | Not Available | 880 | Open in IMG/M |
Ga0224722_1129573 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 834 | Open in IMG/M |
Ga0224722_1159671 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 738 | Open in IMG/M |
Ga0224722_1174854 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus | 700 | Open in IMG/M |
Ga0224722_1180908 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 686 | Open in IMG/M |
Ga0224722_1188738 | Not Available | 669 | Open in IMG/M |
Ga0224722_1226585 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 601 | Open in IMG/M |
Ga0224722_1231849 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 593 | Open in IMG/M |
Ga0224722_1237012 | Not Available | 586 | Open in IMG/M |
Ga0224722_1245285 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium | 574 | Open in IMG/M |
Ga0224722_1253776 | All Organisms → cellular organisms → Bacteria | 563 | Open in IMG/M |
Ga0224722_1254915 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium | 561 | Open in IMG/M |
Ga0224722_1280872 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 530 | Open in IMG/M |
Ga0224722_1290039 | Not Available | 520 | Open in IMG/M |
Note: The use of this dataset is restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of the sequences below requires obtaining a license from the dataset's corresponding author(s).
Scaffold ID | Protein ID | Family | Sequence |
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Ga0224722_1001310 | Ga0224722_100131010 | F094045 | MKYLSIFFTILFIWIAVIFMALTRDRTSEIFQLYLAVMLSTVVLFLIGFAKK |
Ga0224722_1019143 | Ga0224722_10191433 | F011188 | METYNIYMDEAPAAGDVNGDEGWEVEFRVVGQSIDDGDPENNAVLAGLDLVDLINLRDALQQEIDNFALTALEAQAMVSDSGEELMP |
Ga0224722_1020336 | Ga0224722_10203362 | F001068 | VSTSPSILDELRQQYEAARTSDHGHSDVEGYEQINARMRKSYAWLDKAFSYLDGVKPAIAHRYDVGHGLVFENTRFARGYVGQHERRIVGFPVIDEINVYYEIAAAKPLTIEVAPGGVQMAEKSLDDAGLQYTCRRVEDGGGVVRKCVISVPPAIPAKVGFNVDYQSGMVTVALVNVDRFDRVTLAFHSQAIDETVLDDLLKFILGRDAAFLRRAPLAGLHGTPRG |
Ga0224722_1024658 | Ga0224722_10246581 | F002505 | MFGFLTSGTKDFADPLVTAKSTAAWLHQLPALDVIGRQQHVMRAFDAMRQSRKPVDIPRVQAVEFLDAALGADRRQLIKQYVENYDGNPKLAERIWQAIYDLSQGFMYAYQTALEEALRQAQNVRWKPMPPLLFGRLVHYYGTDAKLRVFRFERWIPAKWMELHRTYLRACEIGIERVPAVLHSSGPNATQWTVEQEYLNVLLVHQLNTGNMSPPQLDWAMSQLRAWSRRLSLDAVPRSPEGFFVDIAGKTGLVRRTGSDSGSMLRYLDTTPLAESLERAIGALR |
Ga0224722_1026597 | Ga0224722_10265971 | F006851 | VARAAKLDLRSFQQELASRLATKTAAQVESSRLGLSCGGDRWLVRLADAGEVVAM |
Ga0224722_1029057 | Ga0224722_10290574 | F036582 | VAEPSRFQHSLAEFCQATAAWRRRKAEEYDRDERNLRTAAALDELAAHVLSLPADDARVLRLQRLAGTGEDFTPDQRVLYELGRFRFHHPETGLDPFLDTLVTLAEAD |
Ga0224722_1032206 | Ga0224722_10322062 | F059728 | VQQRFGADKFKVVLIDVDPEYYKKPEEYLPKAKKILDKQKLDWPNTLAPKGFSDVVRTFNLSGYGNIVVDARGIVRGVNAHDKEFVSLVEKIMGASEAGKPEK |
Ga0224722_1039020 | Ga0224722_10390201 | F001844 | VVHPMFRWFRSFSDPLASAGNATRWIGQLPTVDAASLQKEALDLVATFPGVKREAGPGQVEALLRIDGRVEPVIADLTRQYAQNYQKSTNIESRLWHSVFDLVKAFIAAYQVALKAGYPRADNKRWRAILPWVIVRLAHYRGLDGKYRLFRYSHWIPAQWREFHELYEFARMRGWQREQLVFGVGAFAKPGVSFEQEYIKTLLLMRLDSGNFTPDQVEWVARQIEDWAPALTLTPPPSEGSPFVVDLAGSAGLRRRDRAQSGGRVMYLDPTPLYGRVVERLRWLPEQDTDTAGAGELPVREQRLLLMRLAALYGPDAIAKAPRAPR |
Ga0224722_1042578 | Ga0224722_10425782 | F004728 | MSKAIASLVRLGVGAQQDRKQEFLRKLKANLANGDPNAQDRLVDEFQALILGR |
Ga0224722_1043075 | Ga0224722_10430752 | F007038 | MARRVFLDTEWTAAPWSGGSDLMWIGLADEEGRSWYGISSEVEIDPTTNPFVSGAFRLIDRDEPRMSRQHLAQAVLDFCGDVDEFWAWVPTIESFADYSRLGDQALEVFQKCWDVDLQMLKSLISPWPVRWPNELNDLNRAAAAAGVQIPPRAANHLHPRVHAEWNRKLFGLIQAVRRSD |
Ga0224722_1054594 | Ga0224722_10545943 | F025574 | MSGVDQPAPESQLGERNLTTLHAVAQALAIGPMFSVALILGGISRPDIGAGWNAALAVLIATFGVLAIGYVVAMYARRFSGAGAVYEYLTHGAHPWLGVLTAGFFFVGVLFLG |
Ga0224722_1060230 | Ga0224722_10602302 | F001057 | VKTSIELDASNRVVLSRELRRAAGIPRRQRLLAYATPGRIVLEMEANTSGRLVKRGKLKVWTGAVPLTPIEEAVEQSRHYGR |
Ga0224722_1098320 | Ga0224722_10983201 | F028447 | MKDEARAENRLWVPDHPDGSGWADVDWVSAAKGSRYHYRHARSIQEERGSLPSYYRVVTRLESEVLHPHENSYFVSWEQLADFLAEVCLAGGAETIWHVEGCAAPPDESRVAPIKSG |
Ga0224722_1118188 | Ga0224722_11181881 | F091543 | MYYEPDTVWGRTIEGDDEVAVPKSGLSLTQRRVLRDLAQPRTFASIAAKQRMDAPKLENELIWLAERKLVAYQRPGTDGPRTAPRIHQPAANAASVADEPWRRPPLAVCLLAVALGIGSVLVILH |
Ga0224722_1129573 | Ga0224722_11295732 | F100598 | MDEFTIGAEVRVAMPRGVSKRGIPGISVLYSTWPEARFDGAVGTIVDIDPRSTYGIPLYLIDFSGHKNRVAIPWQRQWFRQEWIVPEGERVERPLATEGALVAASGAGKTTLSDE |
Ga0224722_1159671 | Ga0224722_11596711 | F011630 | LMFGFGNNAREPLADVKSVERWLASFPGNDPLTIHSEVLRELGRIAEPTAKRTPQRLEAVFHLDRHCASLRNNLTIQYIEHATRSSRIEHQLWSALFNLTQAFLFAYYAFAREVSNHAQSAKWQQLLPELLCRQVSHMGLDAKIRLYRYEQWIPAKWAELHALFTLACSRQIDRAPLSRGASGNTTIEHEYLVALLLQLMNAGNMTARHLEWVANELDEWAAPLRLSLEPSSVTSFYVDLGGREG |
Ga0224722_1174854 | Ga0224722_11748541 | F040773 | MGYGIAIFAVVAIGCVIAGAVAMRRRGDAGDDDTMSDAEFRRIEGFDEP |
Ga0224722_1176065 | Ga0224722_11760651 | F000197 | MTPASGPWPLVYGAAMAVTGVANLAVKVPDLDPAIQFYERAGAEVRDRAPWYGGERVDVYLGVLMITLFTRAIYEDDADLPDSGFLHVATFTDDLDAELEGHDVVWGPAIVEGTFGKRRIVFVDAPGNMRLEFMEQ |
Ga0224722_1180908 | Ga0224722_11809082 | F036908 | MLLALVCVAAGAAAGPVDLYLTGPKFCPQDRPRNAPRISEVQAIERTKAMLPDDFCGPSLFVSGCTFDVENEYDSWRVYAHQYKTVGGRQDKGGLKHTYLILDAVGNCLAHIPGTEFGAL |
Ga0224722_1188738 | Ga0224722_11887383 | F009406 | MKILGTFELERLVREAFPAKRLFSAETELGAAARRLPLVAFVHGGADPFLDRQFDAWLEGKPTYVALHQLLNRLC |
Ga0224722_1226585 | Ga0224722_12265851 | F068909 | SPKPPCPKCGRAEVERLWSTINTEWLPSDVAWDRVGRTWD |
Ga0224722_1231849 | Ga0224722_12318492 | F003771 | ARFHGLYLPPPSRPDKPLTVKTLIVPTQEYSEGRSVILTTGRSVYTVALRHLVEQRADWSWAAIQIVEKKARI |
Ga0224722_1237012 | Ga0224722_12370122 | F026415 | MSAAGTISVTVEDFTGQVRRKARGIPTDATVGDLVGSLMHELRLPANDSQGRSLTYSARARGESLAENDRVGDVLVEDDVVTLTQNVTAG |
Ga0224722_1245285 | Ga0224722_12452852 | F070322 | MLLSGIGPRLIGLVVGSAVPFAALIGFGLWSQWRNDQAAAVERALGEARLIASQVDDHFSNLR |
Ga0224722_1253776 | Ga0224722_12537762 | F004167 | MTNGAAAEPQAVVFVSDRSGAALRRRERCLKLAGIWHAIDAERRPSGTYYKLCVRQSDAVAAHLALQMGGCGRSLRLQDNRTSVSAALREIARAAWDELLLLLARVADVVRDVAPRLLTG |
Ga0224722_1254915 | Ga0224722_12549152 | F098838 | MISGNLGEDFGVLADTVEVVIAVILILGGIYITYAIQKWADRAGEQPPADNQGLSGAAQQYEQNTLRG |
Ga0224722_1280872 | Ga0224722_12808721 | F041359 | MFGFGNNAREPLADVKSVERWLASFPGNDPLTIHSEVLRELGRIAEPTAKRTPQRLEAVFQLDRHCASLRNNLTIQYIEHATRSSRIEHQLWSALFN |
Ga0224722_1290039 | Ga0224722_12900391 | F097376 | MKKAVAPKKNKTAKDVVPQDKQTKAGPVELDLETLKKVSGGLPRGGWIREK |
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