Metagenome / Metatranscriptome Family F098838

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098838
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	67 residues
Representative Sequence	MLSNNLAGDFGVLADTVEVVIAVIMILGGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG
Number of Associated Samples	64
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.29 %
% of genes near scaffold ends (potentially truncated)	21.36 %
% of genes from short scaffolds (< 2000 bps)	90.29 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (33.010 % of family members)
Environment Ontology (ENVO)	Unclassified (33.981 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.340 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.71% β-sheet: 0.00% Coil/Unstructured: 57.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF13473	Cupredoxin_1	60.19
PF00127	Copper-bind	14.56
PF04961	FTCD_C	5.83
PF01208	URO-D	0.97
PF01042	Ribonuc_L-PSP	0.97
PF00355	Rieske	0.97
PF08735	DUF1786	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG3404	Formiminotetrahydrofolate cyclodeaminase	Amino acid transport and metabolism [E]	5.83
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.97
COG0407	Uroporphyrinogen-III decarboxylase HemE	Coenzyme transport and metabolism [H]	0.97
COG4012	Uncharacterized protein, DUF1786 family, actin-like ATPase superfamily	General function prediction only [R]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	70.87 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	70.87 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	48.54 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	6.80 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia	48.54 %
Sphaerobacteridae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae	5.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	48.54 %
Sphaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales	5.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	48.54 %
Sphaerobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae	5.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	48.54 %
Sphaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	5.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	48.54 %
Nitrolancea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea	5.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	48.54 %
Nitrolancea hollandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	5.83 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2081372006\|FNTS_GKKEVUV02JWQLE	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	500	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0814883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	591	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11388176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	519	Open in IMG/M
3300000750\|JGI12272J11983_1076970	All Organisms → cellular organisms → Bacteria	3455	Open in IMG/M
3300000829\|JGI12397J12024_1228787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	541	Open in IMG/M
3300002568\|C688J35102_118431158	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005366\|Ga0070659_100389512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1175	Open in IMG/M
3300005505\|Ga0068898_10005400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1209	Open in IMG/M
3300005530\|Ga0070679_101643559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	590	Open in IMG/M
3300005834\|Ga0068851_10968824	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300006038\|Ga0075365_10096197	All Organisms → cellular organisms → Bacteria	2023	Open in IMG/M
3300006092\|Ga0082021_1105312	All Organisms → cellular organisms → Bacteria	100499	Open in IMG/M
3300006846\|Ga0075430_101303273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	597	Open in IMG/M
3300006853\|Ga0075420_100348924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	1281	Open in IMG/M
3300006853\|Ga0075420_101777637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	527	Open in IMG/M
3300006876\|Ga0079217_11768602	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300006894\|Ga0079215_10238262	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300006894\|Ga0079215_11223908	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300006918\|Ga0079216_11485853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	566	Open in IMG/M
3300009094\|Ga0111539_11773288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	716	Open in IMG/M
3300009100\|Ga0075418_12546419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	558	Open in IMG/M
3300009540\|Ga0073899_10874737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	637	Open in IMG/M
3300009789\|Ga0126307_10057821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	3039	Open in IMG/M
3300009789\|Ga0126307_10126880	All Organisms → cellular organisms → Bacteria	2035	Open in IMG/M
3300009789\|Ga0126307_10213042	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300009789\|Ga0126307_10247023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1434	Open in IMG/M
3300009789\|Ga0126307_10339892	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300009789\|Ga0126307_10711063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	810	Open in IMG/M
3300009789\|Ga0126307_11519760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	543	Open in IMG/M
3300009840\|Ga0126313_10167999	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300009840\|Ga0126313_10577074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	905	Open in IMG/M
3300010036\|Ga0126305_10616450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	730	Open in IMG/M
3300010036\|Ga0126305_10853100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	621	Open in IMG/M
3300010036\|Ga0126305_10877596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	612	Open in IMG/M
3300010036\|Ga0126305_11013743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	570	Open in IMG/M
3300010039\|Ga0126309_10715131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	645	Open in IMG/M
3300010040\|Ga0126308_10240014	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300010040\|Ga0126308_10459169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	856	Open in IMG/M
3300010040\|Ga0126308_11104365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	559	Open in IMG/M
3300010040\|Ga0126308_11228695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	531	Open in IMG/M
3300010041\|Ga0126312_11243075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	550	Open in IMG/M
3300010041\|Ga0126312_11349715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	528	Open in IMG/M
3300010042\|Ga0126314_10078355	All Organisms → cellular organisms → Bacteria	2210	Open in IMG/M
3300010042\|Ga0126314_10107074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1906	Open in IMG/M
3300010042\|Ga0126314_10439110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	943	Open in IMG/M
3300010042\|Ga0126314_10671378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	758	Open in IMG/M
3300010042\|Ga0126314_11099262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	592	Open in IMG/M
3300010044\|Ga0126310_10070237	All Organisms → cellular organisms → Bacteria	2024	Open in IMG/M
3300010044\|Ga0126310_10261672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1172	Open in IMG/M
3300010044\|Ga0126310_10908993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	686	Open in IMG/M
3300010044\|Ga0126310_11212672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	606	Open in IMG/M
3300010045\|Ga0126311_11077099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	660	Open in IMG/M
3300010045\|Ga0126311_11798003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	519	Open in IMG/M
3300010045\|Ga0126311_11812428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	517	Open in IMG/M
3300010166\|Ga0126306_10314926	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300010166\|Ga0126306_10471443	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300010371\|Ga0134125_12249285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	593	Open in IMG/M
3300012212\|Ga0150985_108345410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	681	Open in IMG/M
3300012212\|Ga0150985_110969215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	654	Open in IMG/M
3300012212\|Ga0150985_112413135	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300012212\|Ga0150985_113970220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	602	Open in IMG/M
3300012212\|Ga0150985_115253232	All Organisms → cellular organisms → Bacteria	2038	Open in IMG/M
3300012212\|Ga0150985_115444062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	978	Open in IMG/M
3300012212\|Ga0150985_116383645	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300012212\|Ga0150985_117214380	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300012212\|Ga0150985_118478526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	757	Open in IMG/M
3300012212\|Ga0150985_119074970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1541	Open in IMG/M
3300012212\|Ga0150985_121730721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	565	Open in IMG/M
3300012469\|Ga0150984_123607501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	688	Open in IMG/M
3300012678\|Ga0136615_10193287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	934	Open in IMG/M
3300012680\|Ga0136612_10031056	All Organisms → cellular organisms → Bacteria	2678	Open in IMG/M
3300012681\|Ga0136613_10186807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1173	Open in IMG/M
3300012684\|Ga0136614_10396955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1009	Open in IMG/M
3300012911\|Ga0157301_10434625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	517	Open in IMG/M
3300017789\|Ga0136617_10014547	All Organisms → cellular organisms → Bacteria	7021	Open in IMG/M
3300017965\|Ga0190266_10595960	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300018422\|Ga0190265_11833492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	714	Open in IMG/M
3300018432\|Ga0190275_11678405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	713	Open in IMG/M
3300018466\|Ga0190268_10331452	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300018469\|Ga0190270_10287503	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300018920\|Ga0190273_12034043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	533	Open in IMG/M
3300019135\|Ga0193602_1089522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	713	Open in IMG/M
3300019377\|Ga0190264_10319031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	954	Open in IMG/M
3300019767\|Ga0190267_11386238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	532	Open in IMG/M
(restricted) 3300021518\|Ga0224722_1254915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	561	Open in IMG/M
3300022467\|Ga0224712_10369653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	680	Open in IMG/M
3300025313\|Ga0209431_11226628	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300025921\|Ga0207652_11476250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	584	Open in IMG/M
3300027909\|Ga0209382_12223896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	518	Open in IMG/M
3300028592\|Ga0247822_11343634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	600	Open in IMG/M
3300028705\|Ga0307276_10048655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	933	Open in IMG/M
3300028872\|Ga0307314_10240205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	559	Open in IMG/M
3300031229\|Ga0299913_11074016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	769	Open in IMG/M
3300031548\|Ga0307408_101056918	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300031731\|Ga0307405_10747764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	814	Open in IMG/M
3300031852\|Ga0307410_11374950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	619	Open in IMG/M
3300031852\|Ga0307410_11427951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	608	Open in IMG/M
3300031852\|Ga0307410_11813289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	542	Open in IMG/M
3300031938\|Ga0308175_100808453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1026	Open in IMG/M
3300031938\|Ga0308175_101272603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	819	Open in IMG/M
3300031949\|Ga0214473_11841965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	596	Open in IMG/M
3300032002\|Ga0307416_101786891	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300032005\|Ga0307411_10288880	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.87%
Host-Associated	Host-Associated	27.18%
Engineered	Engineered	1.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.05%
Plants	Host-Associated → Plants	27.18%
Aquatic	Environmental → Aquatic	5.83%
Wastewater	Engineered → Wastewater	1.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.65%
Freshwater	Environmental → Aquatic → Freshwater	5.83%
Activated Sludge	Engineered → Wastewater → Activated Sludge	1.94%
Roots	Host-Associated → Plants → Roots	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	10.68%
Ice	Environmental → Aquatic → Freshwater → Ice	4.85%
Sand	Environmental → Terrestrial → Soil → Sand	4.85%
Loam	Environmental → Terrestrial → Soil → Loam	3.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.94%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	1.94%
Lake	Environmental → Aquatic → Freshwater → Lake	0.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.97%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	10.68%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	4.85%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	4.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.94%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.94%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	1.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	33.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	10.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.83%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	4.85%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	4.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.97%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.97%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.97%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.97%
Wastewater Treatment Plant	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater Treatment Plant	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2081372006	Soil microbial communities from sample at FACE Site NTS_071 Nevada Test Site	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000750	Soil microbial communities from Moab, Utah, sample - Soil Crust Dry out, 3 days (biological replicate A) D5A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300000829	Soil microbial communities from Moab, Utah, sample - Soil Crust Prior wet up (biological replicate A) 0A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005505	Soil microbial communities from Colorado Plateau and Sonoran desert - Soil Crust after wet up 5A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006092	Activated sludge microbial communities from wastewater treatment plant in Ulu Pandan, Singapore	Engineered	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009540	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB5-Ph	Engineered	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019135	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300021518 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Balambano_FR1_MetaG	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
FNTS_03583100	2081372006	Soil	MISNNLAEDFGVLADTVEVVIAVIMIIGGILLTYAVQKWADKAGEPPPADNQGLSGAAQPYEPNSLRG
ICChiseqgaiiDRAFT_08148832	3300000033	Soil	MLSNNLAGDFGVLADTVEVVIAVIMILGGIYLTXAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
ICChiseqgaiiFebDRAFT_113881762	3300000363	Soil	MLSENLALDFGVLADTVEVVIAVIMILGGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
JGI12272J11983_10769705	3300000750	Soil	MISNNLAEDFGVLADTVEVVIAVIMIIGGILLTYAVQKWADKAGEPPPADNQGLSGAAQPYEPNSLRG*
JGI12397J12024_12287872	3300000829	Soil	MISNNLAEDFGVLADTVEVVIAVIMIIGGILLTYAVQKWADKAGEPPPADNQGLSGAA
C688J35102_1184311582	3300002568	Soil	MLSENLALDFGVLADTVEVTIAVIMVIAGIYLTYAVQKWADRAGEPPSADNQGLSGAAQPYEPNSLRG*
Ga0070659_1003895122	3300005366	Corn Rhizosphere	MIVNNLADNFGVLADTVEVVIAVIMIVGGIYITYAIQKWADRAGEPPPADNQGLSG
Ga0068898_100054002	3300005505	Soil	VIVQNLADQFGALADTVEVIIAVILIIGGIVLTYLVQRWADRAGEPPPADNQGMSGAAQQYEPNSLRG*
Ga0070679_1016435591	3300005530	Corn Rhizosphere	MIVNNLADNFGVLADTVEVVIAVIMIVGGIYTTHAIQKWADRAGEPPPADNQGLSGAAQPYEPNTIRG*
Ga0068851_109688242	3300005834	Corn Rhizosphere	MIVNNLADNFGVLADTVEVVIAVIMIVGGIYITYAIQKWADRAGEPPPADNQGLSGAAQPYEPNTIRG*
Ga0075365_100961972	3300006038	Populus Endosphere	VISPNLADQFGALADTVEVLIAVVLIIGGLVLTYLIQRWADKAGEPPPADNQGLSGAAQQYQPNSMRG*
Ga0082021_110531271	3300006092	Wastewater Treatment Plant	VISPNLADQFGALADTVEVVIAVILILSGIVITYLIQRWADRAGEPPPADNQGLSGAVTRYEPNQLRG*
Ga0075430_1013032732	3300006846	Populus Rhizosphere	TERRVADAEREVISNNLAGDFGVLADTVEVVIAVIMIIGGILLTYWVQKWADRAGEPPPADNQGLSGAAQPYEPNTLRG*
Ga0075420_1003489242	3300006853	Populus Rhizosphere	MISNNLAADFGVLADTIEVVIATVMIVGGLYLTYVVQKWADRAGEPPPADNQGLSGAAQQYEPNTLRG*
Ga0075420_1017776371	3300006853	Populus Rhizosphere	NLAGDFGVLADTVEVVIAVIMIIGGILLTYWVQKWADRAGEPPPADNQGLSGAAQPYEPNTLRG*
Ga0079217_117686022	3300006876	Agricultural Soil	MISENLAEDFGVLADTVEVVIAVIMILGGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0079215_102382622	3300006894	Agricultural Soil	MISNNLADDFGVLADTVEVVIAVILILAGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0079215_112239081	3300006894	Agricultural Soil	MISNNLAGDFGVLADTVEVVIAVVFIIAGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0079216_114858532	3300006918	Agricultural Soil	MISNNLADDFGVLADTVEVVIAVVFIIGGILLTYWVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0111539_117732883	3300009094	Populus Rhizosphere	MLSNNLAGDFGVLADTVEVTIAVIMIIAGIHLTYAVRKWADRAGEPPPADNQGLSGAAQPYEPN
Ga0075418_125464191	3300009100	Populus Rhizosphere	MISNNLAADFGVLADTVEVIIAAVMIVGGLYLTYVVQKWADRAGEPPPADNQGLSGA
Ga0073899_108747372	3300009540	Activated Sludge	MISPNLADQFGALADTVEVLIAVLLIIGGLVLTYLIQRWADRAGEPPPADNQGRSGAAQQYEPNSLRG*
Ga0126307_100578214	3300009789	Serpentine Soil	MLSNNLAGDFGVLADTVEVVIAVIMILGGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0126307_101268801	3300009789	Serpentine Soil	MISNNLAGDFGVLADTVEVVIAVVLIIGGILLTYGVQKWADRAGEAPPADNQGLSGAAQPYEPNSLRG*
Ga0126307_102130422	3300009789	Serpentine Soil	MISNNLAGDFGVLADTIEVVIAVILILGGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNTLRG*
Ga0126307_102470231	3300009789	Serpentine Soil	MISNNLAGDFGVLADTVEVVIAVILILGGIYLTYMVQKWADRAGEPPPADNQGLSGAAQPYEPNTLRG*
Ga0126307_103398923	3300009789	Serpentine Soil	MISNNLAGDFGVLADTVEVVIAVVLIIGGILLTYGVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0126307_107110632	3300009789	Serpentine Soil	MISNNLAGDFGVLADTVEVVIAVIMILGGIYRTYVVQKWADRAGEPPPADNQGLSGAAQPYEPNTLRG*
Ga0126307_115197602	3300009789	Serpentine Soil	MLSNNLAGDFGVLADTVEVTIAVIMVLAGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0126313_101679992	3300009840	Serpentine Soil	MISNNLAGDFGVLADTVEVVIAVILIIAGILLTYGVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0126313_105770742	3300009840	Serpentine Soil	MISNNLAGDFGVLADTVEVVIAVIMILGGIYLTYMVQKWADRAGEPPPADNQGLSGAAQPYEPNTLRG*
Ga0126305_106164502	3300010036	Serpentine Soil	VDAERQMISNNLAGDFGVLADTVEVVIAVILILGGIYLTYMVQKWADRAGEPPPADNQGLSGAAQPYEPNTLRG*
Ga0126305_108531002	3300010036	Serpentine Soil	MISNNLAGDFGVLADTVEVVIAVIMILGGIYLTYMVQKWADRAGEPPPADNQGLSGAAQPYEPNTL
Ga0126305_108775961	3300010036	Serpentine Soil	MISNNLAEDFGVLADTVEVVIAVIMIIGGIFLTYGVQKWADRAGEPPPADNQGLSGAAQPYEPNTLRG*
Ga0126305_110137431	3300010036	Serpentine Soil	NLAGDFGVLADTVEVVIAVILILGGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNTLRG*
Ga0126309_107151311	3300010039	Serpentine Soil	QMISNNLAGDFGVLADTVEVVIAVTLIIGGILLTYGVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0126308_102400141	3300010040	Serpentine Soil	MISSNLALDFEHLADTLEVSIAVIMILGGILLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0126308_104591692	3300010040	Serpentine Soil	GRHVDRRVAEKLMISNNLAGDFGVLADTVEVVIAVVLIIGGILLTYGVQKWADRAGEAPPADNQGLSGAAQPYEPNSLRG*
Ga0126308_111043651	3300010040	Serpentine Soil	MLSNNLAGDFGVLADTVEVTIAVIMILGGIVLTYGVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0126308_112286951	3300010040	Serpentine Soil	MLSNNLAGDFGVLADTVEVTIAVIMVLGGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0126312_112430752	3300010041	Serpentine Soil	MLSNNLAGDFGVLADTVEVTIAVIMIIGGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0126312_113497152	3300010041	Serpentine Soil	MLSNNLAGDFGVLADTVEVVIAVAMIIGGILLTYGVQKWADRAGEPPPADNQGLSGAAQPYEPNTLRG*
Ga0126314_100783553	3300010042	Serpentine Soil	MISNNLDGDFGVLADTVEVVIAVVLIIGGILLTYGVQKWADRAGEAPPADNQGLSGAAQPYEPNSLRG*
Ga0126314_101070742	3300010042	Serpentine Soil	MISNNLAGDFGVLADTVEVVIAVTLIIGGILLTYGVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0126314_104391102	3300010042	Serpentine Soil	MISNNLAGDFGVLADTIEVVIAVILILGGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0126314_106713782	3300010042	Serpentine Soil	MLSNNLAGDFGVLADTVEVTIAVIMILAGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0126314_110992622	3300010042	Serpentine Soil	MLSNNLAGDFGVLADTVEVTIAVIMVLGGIYLTYAVQKWADRAGEPPSADNQGLSGAAQPYEPNSLRG*
Ga0126310_100702372	3300010044	Serpentine Soil	MISSNLALDFEHLADTIEVSIAVIMILGGILLTYAVQKWADRAGEPPSADNQGLSGAAQPYEPNSLRG*
Ga0126310_102616722	3300010044	Serpentine Soil	MLSNNLAGDFGVLADTVEVVIAVVMILAGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0126310_109089932	3300010044	Serpentine Soil	MLSENLALDFGVLADTVEVVIAVIMILGGIYLTYGVQKWADRAGEPPPADNQGLSGAAQPYEPNTLRG*
Ga0126310_112126722	3300010044	Serpentine Soil	MLSNNLAGDFGVLADTVEVVIAVIMILGGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYE
Ga0126311_110770992	3300010045	Serpentine Soil	MLSNNLAGDFGVLADTVEVVIAVIMILGGIYLTYAVQKWADRAGEPPPADNQGLSGA
Ga0126311_117980032	3300010045	Serpentine Soil	ADTVEVVIAVIMILGGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNTLRG*
Ga0126311_118124282	3300010045	Serpentine Soil	MLSNNLAGDFGVLADTVEVTIAVIMVLAGIYLTYAVQKWADRAGEPPPADNQGLSGAAQP
Ga0126306_103149262	3300010166	Serpentine Soil	MISNNLAGDFGVLADTVEVVIAVVFIIGGILLTYWVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0126306_104714432	3300010166	Serpentine Soil	MISNNLADDFGVLADTVEVVIAVILILGGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0134125_122492851	3300010371	Terrestrial Soil	MISPNLADQFGALADTVEVVIAVILIIGGLVLTYLIQRWADRAGEPPPADNQGMSGAAQQYQPNSMRG*
Ga0150985_1083454101	3300012212	Avena Fatua Rhizosphere	MIVSNLAENFGVLADTVEVVIAFILILGGIWITYAIQKWADRASEPPPADNQGLSGAAQPYEPNTLRG*
Ga0150985_1109692151	3300012212	Avena Fatua Rhizosphere	MLSENLALDFGVLADTVEVTIAVIMVLAGIYLTYAVQKWADRAGEPPSADNQGLSGAAQPYEPNSLRG*
Ga0150985_1124131352	3300012212	Avena Fatua Rhizosphere	MISNNLAGDFGVLADTVEVVIAVLMILGGILLTFGIQKWADKAGEAPPADNQGLSGAAQPYEPNSLRG*
Ga0150985_1139702202	3300012212	Avena Fatua Rhizosphere	MISNNLALNFGVLADTIEVSIAVIMIIGGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG*
Ga0150985_1152532322	3300012212	Avena Fatua Rhizosphere	MIISNLAENFGVLADTVEVVIAVVLIIGGIYLTYAIQKWADKATATPPADNQGLSGAAQAYEPNSLRG*
Ga0150985_1154440622	3300012212	Avena Fatua Rhizosphere	MLSENLALDFGVLADTVEVAIAVILILGGIYLTYAVQKWADRAGEPPSADNQGLSGAAQPYEPNTLRG*
Ga0150985_1163836451	3300012212	Avena Fatua Rhizosphere	MIVSNLAENFGVLSDTVEVVIAFILILGGIFLTYAIQKWADKATETPPADNQGLSGAAQPYEPNTMRG*
Ga0150985_1172143802	3300012212	Avena Fatua Rhizosphere	MISSNLALDFEHLADTIEVSIAVIMILGGILLTYAVQKWADRAGEPPSADNQGMSGAAHPYEPNSLRG*
Ga0150985_1184785261	3300012212	Avena Fatua Rhizosphere	MIVNNLAENFGVLSDTVEVVVAFVLILGGIYVTYAIQKWADRATETPPADNQGFSGAAQPYEPNSLRG*
Ga0150985_1190749701	3300012212	Avena Fatua Rhizosphere	MISSNLALDFEHLADTVEVSIAVIMILGGILLTYAVQKWADRAGEPPSADNQGLSGAAQPYEPNSLRG*
Ga0150985_1217307212	3300012212	Avena Fatua Rhizosphere	MIVSNLAENFGVLADTVEVVIAVVLIIGGIIITYAIQKWADKASEPPPADNQGLSGAAQPYEPNTLRG*
Ga0150984_1236075011	3300012469	Avena Fatua Rhizosphere	MIVSNLAENFGVLADTVEVVIAVVLIIGGIIITYAIQKWADKASEPPPADNQGLSGAARPYEPNTLRG*
Ga0136615_101932872	3300012678	Polar Desert Sand	MIIENMANFGVLADTVEVVIAVIMIIAGILLTYFVQKWADRAGEPPPADNQGLSGAAQQYEPNSLRG*
Ga0136612_100310562	3300012680	Polar Desert Sand	MIFSNLADNFGALADTVEVLIAVIMIIGGLVLTYAIQQWADKAGEPPAADNQGLSGAAQQYEPNSLRG*
Ga0136613_101868071	3300012681	Polar Desert Sand	MISNNLADDFGVLADTVEVVIAVVMIIGGILLTFWVQKWADRAGEPPPADNQGLSGAAQPYEPNTLRG*
Ga0136614_103969552	3300012684	Polar Desert Sand	MIFNNLAENFGVLADTVEVVIAVIMIIAGILLTYFVQKWADRAGEPPPADNQGLSGAAQQYEPNSLRG*
Ga0157301_104346251	3300012911	Soil	MLSENLALDLGVLADTVEVTIAVIMVLGGIYLTYAVQKWADRAGEPPSADNQGLSGAAQPYEPNSLRG*
Ga0136617_100145473	3300017789	Polar Desert Sand	MIFNNLAENFGVLADTVEVVIAVIMIIAGILLTYFVQKWADRAGEPPPADNQGLSGAAQQYEPNSLRG
Ga0190266_105959602	3300017965	Soil	MLSNNLAGDFGVLADTVEVTIAVIMIIGGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG
Ga0190265_118334921	3300018422	Soil	MISNNLADDFGVLADTVEVVIAVILIIGGIYLTYAVQKWADRAGEPPPADNQGLSGAARPYEPNSLRG
Ga0190275_116784052	3300018432	Soil	MISNNLADDFGVLADTVEVVIAVIMILGGIYLTFVVQKWADKAGEPPPADNQGLSGAAQQYEPNSMRS
Ga0190268_103314522	3300018466	Soil	MISNNLADDFGVLADTVEVVIAVILVVGGIYLTYMVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG
Ga0190270_102875032	3300018469	Soil	MISNNLADDFGVLADTVEVVIAVVFIIGGILLTYWVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG
Ga0190273_120340432	3300018920	Soil	MLSNNLAGDFGVLADTVEVVIAVAMIIGGILLTYGVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG
Ga0193602_10895221	3300019135	Soil	MISNNLAEDFGVLADTVEVVIAVIMIIGGIVLTYGVQKWADRAGEPPPADNQGLSGAAQPYEPNSLR
Ga0190264_103190312	3300019377	Soil	MISNNLAEDFGVLADTVEVLIAVIMIVGGIVLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLR
Ga0190267_113862382	3300019767	Soil	MLSENLALDFGVLADTVEVVIAVIMILGGIVLTYGVQKWADRAGEPPPADNQGLSGAAQPYEPNTLRG
(restricted) Ga0224722_12549152	3300021518	Freshwater Sediment	MISGNLGEDFGVLADTVEVVIAVILILGGIYITYAIQKWADRAGEQPPADNQGLSGAAQQYEQNTLRG
Ga0224712_103696531	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MIVNNLADNFGVLADTVEVVIAVIMIVGGIYITYAIQKWADRAGEPPPADNQGLSGAAQPYEPNTIRG
Ga0209431_112266282	3300025313	Soil	MIVPNLAENFGVLADTVEVVIAVILIVGGIFLTYGIQKWADKAGAIPPADNQGLSGAAQPYE
Ga0207652_114762502	3300025921	Corn Rhizosphere	MIVNNLADNFGVLADTVEVVIAVIMIVGGIYTTHAIQKWADRAGEPPPADNQGLSGAAQPYEPNTIRG
Ga0209382_122238962	3300027909	Populus Rhizosphere	MISNNLAADFGVLADTVEVIIAAVMIVGGLYLTYVVQKWADRAGEPPPADNQGLSGAAQQYEPNTLRG
Ga0247822_113436341	3300028592	Soil	VISNNLAADFGVLADTIEVIIAVIMIVGGIYLTYVIQKWADRAGEPPPADNQGLSGAAQQYEPNTLRG
Ga0307276_100486551	3300028705	Soil	MISSNLALDFEHLADTIEVSIAVIMILGGILLTYAVQKWADRAGEPPSADNQGLSGAAQPYEPNSLRG
Ga0307314_102402051	3300028872	Soil	MISSNLALDFEHLADTIEVSIAVIMILGGILLTYAVQKWADRAGEPPSADNQGLSGAAQPYEP
Ga0299913_110740161	3300031229	Soil	DDFGVLADTVEVVIAVIMILGGIYLTYVVQKWADKAGEPPPADNQGLSGAAQPYEPNTLR
Ga0307408_1010569182	3300031548	Rhizosphere	MISNNLAGDFGVLADTVEVVIAVVFIIGGILLTYWVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG
Ga0307405_107477642	3300031731	Rhizosphere	MLSENLALDFGVLADTVEVVIAVIMILGGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNTLRG
Ga0307410_113749501	3300031852	Rhizosphere	MLSNNLAGDFGVLADTVEVVIAVIMILGGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG
Ga0307410_114279512	3300031852	Rhizosphere	MISNNLAEDFGVLADTVEVVIAVIIILGGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG
Ga0307410_118132892	3300031852	Rhizosphere	MISPNLADQFGALADTVEVLIAVILIIGGLVLTYLIQRWADRAGEPPPADNQGMSGAAQQYQPNSMRG
Ga0308175_1008084532	3300031938	Soil	MLSENLALDFGVLADTVEVAIAVIMILGGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNTLRG
Ga0308175_1012726031	3300031938	Soil	MISNNLALNFGVLADTIEVSIAVIMIIGGIYLTYAVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG
Ga0214473_118419651	3300031949	Soil	MLSNNLAADFGVLADTVEVVIAVIMIVGGILLTYWVQKWADKAGEIAAADNQGLSGAAQRYEPNTLRG
Ga0307416_1017868912	3300032002	Rhizosphere	MISNNLAGDFGVLADTVEVVIAVILIIAGILLTYGVQKWADRAGEPPPADNQGLSGAAQPYEPNSLRG
Ga0307411_102888803	3300032005	Rhizosphere	EDFGVLADTVEVVIAVIIILGGIYLTYVVQKWADRAGEPPPADNQGLSGAAQPYEPNTLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters