NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Sample 3300021296

3300021296: Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R881 (Metagenome Metatranscriptome)



Overview

Basic Information
IMG/M Taxon OID3300021296 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0114516 | Gp0225683 | Ga0210300
Sample NameMetatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R881 (Metagenome Metatranscriptome)
Sequencing StatusPermanent Draft
Sequencing CenterDOE Joint Genome Institute (JGI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size46907019
Sequencing Scaffolds46
Novel Protein Genes60
Associated Families55

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available26
All Organisms → cellular organisms → Bacteria → Proteobacteria1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales4
All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Skeletonemataceae → Skeletonema → Skeletonema marinoi-dohrnii complex → Skeletonema marinoi1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Monogononta → Pseudotrocha → Ploima → Brachionidae → Brachionus1
All Organisms → cellular organisms → Eukaryota → Sar1
All Organisms → cellular organisms → Eukaryota1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Postciliodesmatophora → Heterotrichea → Heterotrichida1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameEstuarine Microbial Communities From The Columbia River Estuary, To Analyze Effect Of Nutrient Fluxes, A Time Series
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine → Estuarine Microbial Communities From The Columbia River Estuary, To Analyze Effect Of Nutrient Fluxes, A Time Series

Alternative Ecosystem Assignments
Environment Ontology (ENVO)estuarine biomeestuaryestuarine water
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Water (saline)

Location Information
LocationUSA: Oregon
CoordinatesLat. (o)46.217Long. (o)-123.782Alt. (m)N/ADepth (m)1
Location on Map
Zoom:    Powered by OpenStreetMap ©


Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F000039Metagenome / Metatranscriptome4032Y
F000044Metagenome / Metatranscriptome3572Y
F000049Metagenome / Metatranscriptome3277Y
F000068Metagenome / Metatranscriptome2731Y
F000080Metagenome / Metatranscriptome2485Y
F000237Metagenome / Metatranscriptome1498Y
F000306Metagenome / Metatranscriptome1332Y
F000354Metagenome / Metatranscriptome1244Y
F000947Metagenome / Metatranscriptome824Y
F001488Metagenome / Metatranscriptome686Y
F001503Metatranscriptome681Y
F002698Metagenome / Metatranscriptome536Y
F002706Metagenome / Metatranscriptome535Y
F002882Metagenome / Metatranscriptome523Y
F003946Metatranscriptome460Y
F004516Metagenome / Metatranscriptome434Y
F006296Metagenome / Metatranscriptome376Y
F007402Metagenome / Metatranscriptome352Y
F007421Metagenome / Metatranscriptome351Y
F010163Metagenome / Metatranscriptome307Y
F013645Metagenome / Metatranscriptome269Y
F017317Metagenome / Metatranscriptome241Y
F017797Metagenome / Metatranscriptome238N
F018020Metagenome / Metatranscriptome237Y
F019658Metagenome / Metatranscriptome228Y
F020094Metagenome / Metatranscriptome226Y
F020319Metagenome / Metatranscriptome224N
F023855Metagenome / Metatranscriptome208Y
F027186Metagenome / Metatranscriptome195Y
F027881Metagenome / Metatranscriptome193Y
F028089Metagenome / Metatranscriptome192Y
F028425Metagenome / Metatranscriptome191Y
F038233Metagenome / Metatranscriptome166Y
F039002Metagenome / Metatranscriptome164Y
F039672Metagenome / Metatranscriptome163N
F048997Metagenome / Metatranscriptome147N
F053809Metagenome / Metatranscriptome140N
F059945Metagenome / Metatranscriptome133Y
F063389Metagenome / Metatranscriptome129N
F064770Metagenome / Metatranscriptome128Y
F065427Metagenome / Metatranscriptome127N
F067436Metagenome / Metatranscriptome125Y
F069484Metagenome / Metatranscriptome124Y
F069703Metagenome / Metatranscriptome123Y
F078243Metagenome / Metatranscriptome116N
F079622Metagenome / Metatranscriptome115Y
F080036Metagenome / Metatranscriptome115Y
F080070Metagenome / Metatranscriptome115Y
F081389Metagenome / Metatranscriptome114N
F083434Metagenome / Metatranscriptome113N
F085780Metagenome / Metatranscriptome111Y
F097458Metagenome / Metatranscriptome104Y
F098681Metagenome / Metatranscriptome103N
F099352Metatranscriptome103Y
F100410Metagenome / Metatranscriptome102Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0210300_100035Not Available653Open in IMG/M
Ga0210300_100436Not Available1036Open in IMG/M
Ga0210300_101083All Organisms → cellular organisms → Bacteria → Proteobacteria1398Open in IMG/M
Ga0210300_101641Not Available590Open in IMG/M
Ga0210300_103510All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales558Open in IMG/M
Ga0210300_105442All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium682Open in IMG/M
Ga0210300_106808All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum500Open in IMG/M
Ga0210300_107427All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Skeletonemataceae → Skeletonema → Skeletonema marinoi-dohrnii complex → Skeletonema marinoi639Open in IMG/M
Ga0210300_111036Not Available607Open in IMG/M
Ga0210300_112358All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis579Open in IMG/M
Ga0210300_113050All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda555Open in IMG/M
Ga0210300_116515Not Available1198Open in IMG/M
Ga0210300_117555All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales530Open in IMG/M
Ga0210300_118688All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda510Open in IMG/M
Ga0210300_118828Not Available549Open in IMG/M
Ga0210300_119034All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales2491Open in IMG/M
Ga0210300_120309Not Available678Open in IMG/M
Ga0210300_125381All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales1892Open in IMG/M
Ga0210300_126021Not Available701Open in IMG/M
Ga0210300_128034All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica1604Open in IMG/M
Ga0210300_128891All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Monogononta → Pseudotrocha → Ploima → Brachionidae → Brachionus546Open in IMG/M
Ga0210300_131860Not Available632Open in IMG/M
Ga0210300_133152All Organisms → cellular organisms → Eukaryota → Sar612Open in IMG/M
Ga0210300_133450All Organisms → cellular organisms → Eukaryota548Open in IMG/M
Ga0210300_135317Not Available649Open in IMG/M
Ga0210300_136348Not Available605Open in IMG/M
Ga0210300_141402Not Available578Open in IMG/M
Ga0210300_144589Not Available1334Open in IMG/M
Ga0210300_147294Not Available686Open in IMG/M
Ga0210300_147813Not Available566Open in IMG/M
Ga0210300_148796All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales605Open in IMG/M
Ga0210300_151487Not Available781Open in IMG/M
Ga0210300_155981Not Available759Open in IMG/M
Ga0210300_156136Not Available583Open in IMG/M
Ga0210300_159360All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium947Open in IMG/M
Ga0210300_160749All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Postciliodesmatophora → Heterotrichea → Heterotrichida786Open in IMG/M
Ga0210300_160899Not Available698Open in IMG/M
Ga0210300_163805Not Available638Open in IMG/M
Ga0210300_170744Not Available585Open in IMG/M
Ga0210300_173278All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage508Open in IMG/M
Ga0210300_177732Not Available607Open in IMG/M
Ga0210300_185227Not Available529Open in IMG/M
Ga0210300_186317Not Available1371Open in IMG/M
Ga0210300_186729All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta516Open in IMG/M
Ga0210300_193123Not Available1131Open in IMG/M
Ga0210300_193930Not Available850Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0210300_100035Ga0210300_1000351F027186MVTNSDFNFTNNEAVILELPFSEHIEELRQRLFHIFWIILFL
Ga0210300_100436Ga0210300_1004361F006296LEGHIFTIGSGNKGKDGDMLRTSMEKMAMYIGTKYGDEAAQEWISGKKIALAEPVYSQVIKDRHAARVKATKERIELKLRGLRAEKVAIQDEIDNSTSIDRGLLKEMREVDDQIAKGEIELADEVEMKLTEDEKISHSNAWRTHRETTESLKKSRGKVYSLLLGQCTQVLVNKMKQD
Ga0210300_101083Ga0210300_1010831F019658MKTNRIKNRNYKLFKYNLLKLQIYSNQPHFTVANFSNSILEQIEAYLKQVLKIIFEYHVCQFKILFIGFPVISKMRQMKLLHFTNHNFISEKSXISGVLRNRFSILTYLQLTQSQNFSKSLKLLLTIKTKPHLVVMFNQKVETNTINEFYKAGIPILSFNXNSLRSLKIAYHTLGNFDFVEKNIKLTFFFLFYSLLKKTP
Ga0210300_101641Ga0210300_1016411F000354MTTINYDRFASFDINECCDHFDSEKQSNWKKINKFIIADGQEYAHIMETEFDFEDTGDGEYEAFQAGVKYALTKMNIAFEAAAVDLQVCEVDLVESMGFVLVRADDEPEDFVKRVLKKPV
Ga0210300_103510Ga0210300_1035101F010163SRNTITHGYIKHTSQTIKALYFIKEETFSYYVQWLLLFWYTNLSNLRIKTNHFILYIYSSFLNNQKLLSYVININLSLTNTVINVNNVNGNPKFFYSAGMFNLQKKQKTRQPKAIITILRALLLKSKFFKTKPVAVHFNNLFFKYQSYILKKLKQKIFAKLVTSYLYKAHNGCRLKKKKRIKIRT
Ga0210300_104686Ga0210300_1046861F000306VTESAEVCTPAFETVCEPVEIVKRNIVDKEQCFPVTRTVCSESTEEIANEICTYSYQQKTEATTAKTVEVTFVKECTQQMVTVCQPAKYGYGQGYGHNYCKEVAQETCYNTPVVTAVEPAVEVASPEPVKNCVQKPISLPKISCEDLTAEKCITVPEVEEETVTLEKCITQLSAPACQTVELTLPKEVCIEIVYGYAADSAKHEPAYPTAAPAYAPAPHYG
Ga0210300_105442Ga0210300_1054422F038233SANFRIEIYQSQADLTPASGAGYPGPYSGVSRNQQIGESLYVPMTKEVTETITVKRMVPVETTEEVTVPATEEGGEPTTQTVTRHSMEEQDVEQEVTKTVPDMSGAEEIDIFAFGYGKLKAKLDDLFGAEHVIDC
Ga0210300_105721Ga0210300_1057211F003946MRGLIVLALVGSSLAARQLQGTQLRQEKSLLNTFPFNAQASTSENHAHAHTNERRPSINIPARNALQAADTGLGGVAFGDVAAANPGSDGKRCIDKVEMIEETEYDEVVQCDHSYDRRCHTTYITNYESQQEEECEENYRKNCFIDYEKIAFNETVQVCRTPLVKDCDVQGPEICRTEYESECWTKQEEHDVQDDVVTCETIQDEKCADETSGYTTLTKCSKWPREVCSVTKKNVKKYTPITGCTKEPRELCAPAGCGFKEGAEQCFDKTQTIVQDAPKEECTLEPQRTCAHVTKLVPKLEPTEECVDVPKEVCTRSRTNPRKVKKPVVKKWCYIPSAESGLA
Ga0210300_106808Ga0210300_1068081F039672EGLQSVDSKDKSVVSSHTKTVHELLELNVVEDHGGDVVGVHFGHGLVSLGLNLSGDSVSVSEDSVSDLGAEGSGVVVSLLLGVGDSEREVLGDLVEIALDGGEELSLWVLLNLSSFSSGGLVSSDVLIGDGIGSNIWESRNVLNRVWVMVVSLDGSGGGDKSAISQ
Ga0210300_107427Ga0210300_1074271F099352EQFLIFGVGIMGFGNGSEAFKGVGAPSLKSEVSVSSNTNRVVLDSQELNASSTAFNLCCAEAYARFTELKRLKIHPGNMTAERDAVESCSAGVYNGIQSSCVAQYEAVKSCLSDNPDEWAKCAAARRELDVCSVKNKLGELKKL
Ga0210300_111036Ga0210300_1110361F080070GQQVWAQVTPVLSQLKDDLINHTGDAVTIVAQTIATLNQIIGAGKRDANQKDLISTIVSSLGLGSVWSTITALGSSVSSQFIQIGTQLLFAGQQVWAQVKPVLAQLVSDLTNHAGDAVTIVAQTIASLNQIIGGSGKRDLVSTIVSSLGLDQVWSTITSLGSAVYLQFIQIGTQLLFAGQQVWAQVTPVLNQLKDDLINHTG
Ga0210300_112358Ga0210300_1123581F017317WFCCADNMYCAATEADCPFVAAKKSLIKMAAKKVVLKKEPCDGTPCPAGCCPEYDWFCCADNMYCAATEADCPFVAAKRTLIKMAAAKKVVLKKEPCDGTPCPAGCCPEYDWFCCADNMYCAATEADCPFVAAKKALIKMAAKKEPCDGTACPAGCCPEYDWFCCADNMYCAATEADCPFVAAKKSLIKMAAK
Ga0210300_113050Ga0210300_1130501F001503WQAYLKNKIMNNIERYFYLIVFAMYVREVGPKGFPQSFSQFMDANSNLRTMIAEGRGKLEWERKIPDEKLEELKALLAAAEFKENMKLIIKRIYELSWDMFGDLPRGHHKNNSMHKLASKTMIEILPPNLAAHIEKKCGSLAGTPDFFDVIGQVSWYEPEA
Ga0210300_116515Ga0210300_1165152F000947VCFFEIVDHGGRRGDTAQALARWRHPVASSEALDVLHRAMRLASYRCIAMAIEIVVDLPAFLLSPISLLATTIAK
Ga0210300_117555Ga0210300_1175551F020094KINYFISYIYFSFFNNRKLISYIINISLSTTNTVINVNTIKGNPKFFYSAGMFKLQKTQKTRQPKAIITILRALLLKSKVFKTKPAALHFNNLFFNHQSYIFKRLKRKVFAKLITSYMYRPHNGCRLRKKRRIKIRTKTRKLQKK
Ga0210300_118688Ga0210300_1186881F007421LVFIMITYWLICSVLVSSGFADFVGHSHGQEVRSGRQETAIQGGIDFSGCVQDSETGLCCVEKEETVTSLEKEPILECTHKNVEQCHYSYVTQFTPSQEEVCEENFEKTCQITFKQQAFNETVKKCYKPVTKVCNGQGPEECRTVYESACTTKYVEKQPGKFVGDTSCEK
Ga0210300_118828Ga0210300_1188281F039002DKRLKLDKPTGHNYMSSETRPIKVTSLDSEKIRAKEIAIENSKTGKVTAVVAVMYLSKDKLCNSRSAKWKMLAKDCQKSANKSEKSKRLARIRQNVALHDDLAKDRGKASQTGTSESHDDVSTSLKVKTKTIRVLLDTGSSGDLLFMQKGKMTFLL
Ga0210300_119034Ga0210300_1190342F064770MDFNLKTYKCFKTKHYLKAINFFFFFQGTSVDNESXIKIEQGFVNHELKYYRILNKLMINTLKSSVFKNLVVLIHGPIIILNNNNNSTKLTFKELENINPLINLLGFRLNNKIYSKKQIKNLKKMSYLENVYIFHKSMKTFTKLPYYKLKSKKTLPISK
Ga0210300_119091Ga0210300_1190911F000039DNFHALCKDLERSEVKKWLAQILEILMAERAKDQKRDELEKLDITIKKHENLIPTVMKTQVMVDLYWKCYAYGDELKPHIEFLDGIMLSSTRDIAPSCVENVDELIERQEKSLVQLETKRGVVKDLIEKGKVLLQNPDKPRFLDSHVQRIEIGWDDTKEKAQDRLTLLNNTKAAWEGYADGNIKIAEEFDKCEEETKKVKKRFNLEAAFEDLARRQEIFNKTKETVHGMFDQLKTDYSTMCLTLPDDKKQQLKKELVPVEEKLALVKIFDEKVQKISEFCNSLKNFDSSLKTIDSWMVGATKELEDIKLSSDKLTPEDRVSRTMDLQEDIAAKVQIIDKNVADELELLPQGDKVPQDAQDFKDELNRIKKYVLDLKEKTVKECNNYSEDVKYWAEYRTGIKEFVPWLEQAEKASTSGLVKPTNLTEAEALYQNSSTFTNSCESHLKLLNAANEAAQKMTSHKESDEEVAKLKSRYDKVKAVSDEWMKKVDTLVKEWKLLDNTVSELNAWVAKDKTADGENQFSLEKM
Ga0210300_120309Ga0210300_1203091F028425MTAAAKPGRREGGGAMDCRARDLVLMAGGATRAAAVATWALVRARGNVLLGVAALRSRATLRFRMRSRLADSVGMFVGGTGLCTLGTDGCAIMERVILLLLLLLVAGTVGGTCTLGTRDMLGVCTLGTRCMLWLVEDVATSSNWSGRACTWAFVASMIRWRSCAA
Ga0210300_123838Ga0210300_1238381F000080MRHQKMAEWMENVEKAIARIMADKVYTSAEFKRERDNFHALCKDLERAEVKKWLAQILEILMAERAKDQKKNETEKLDITIKKHEELIPTVTKTQVMVDLYWKCYAYGDELKPHIEFLDGIMMSSTRDIAPSCVENVDELIERQEKSLVQLETKRGVVKDLIDKGKKILEHPDKPRFLEGHVQRIEIGWDDSKQKAQDRLKLLQETKDAWVGYAENNESIAAEFEKAEEEIKRVKKRFNLQSALDDLKKRQDIYNTSNNTINKLFESINANFKCMCITLPDDKKKIVEKEIKAVSEKLEVNGRFKDKVDKLGEFCTELTNFDSSLKAIDAWKD
Ga0210300_125381Ga0210300_1253812F001488MARLELTLNFPKSFHIKTFNVKSEKKLSPLTKLILQNVQFKHFYYVRDDISYLLKSNPSERDFLLQALYSIVISLQNNLSINFFDMWIYEIYINKVSTHNKFMSRKCQNIEPGEYITIKLAYGSSVSQEKK
Ga0210300_125926Ga0210300_1259261F078243RVAGETALWGTRRQSMNGGGTTPGERCPGTLIVKHEFGMSGRDHTYIKVEHKCVDNRDVTSAVARGVKDDRPQLERISPNIEYGNYLSRKGIEVVLRELKNAEKNDKNLWKNITGGNAMRKWIPDMYDNYVKRVALKVIVEKALKGYITIVQQRYPALKYFKVGALKSLPGAESQYLGHGRKLHSDYPQSVEELEPRFRPVSIIVGLNSFNFMWLNDRTSRESDIRKMTVYPGEMIMFTNHCL
Ga0210300_126021Ga0210300_1260211F065427MSSTKSTESLKDSECEKGQLAIRPPISYVPPTDLHSSMESETIKVRLPDGTTVSVKAFSSGNNEDYILHWAAIFVFLTRRA
Ga0210300_128034Ga0210300_1280342F080036VRWKRGRLRAHVFFSSARIYKFGQGIRRRRRPYVGLSGPTLDGFCEGKDFLSLFRLLSKFSSIDHVDNVTSLCGRVHTLRGTYGGTYENCCPPKHVPLDPKTLMLIWDTGASYGLTPFRSDFIDYVKCDIPVKDVTKVNKVIGIGTTLHKFTDTNGLPVYLPCVSYHLPETDVRLFSPQTYHQMHGGYSEVYGDRIRMLLKTSTVDIEIVREQNNLPAVFD
Ga0210300_128891Ga0210300_1288911F080070MKSFIIVLAICVASTLGAHLNAREVAQKDLISTIVSSLGLGQVWSTITSLGSAVYLQFINIGTQLLFAGQQVWAQVTPVLNQLKDDLINHTGDAVTIVAQTIASLNQIIGGSGKRDLVSTIVSSLGLDQVWATITSLGSSVYLQFVQIGTQLLFAGLVVP
Ga0210300_131860Ga0210300_1318601F059945MLKRVMRMDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILVTRIRKILYVGYRRIFP
Ga0210300_133152Ga0210300_1331522F013645VKIEDNKIMNPAFLLGTAFNIAYWDRKYHSGTICKGVSNTQASNALSGCEREEIP
Ga0210300_133450Ga0210300_1334501F018020TMEKVSIILSGYSSLTLEINNVPIPDPVPPPNEWVI
Ga0210300_135317Ga0210300_1353171F020319MKGAQVVSTERLGSLLGHVTHRGFDDLVDPKNQGIAYPTGNPEILVTGDPLFYTNLLATLDMFRLNSASLTFSTTDEGNQFRRKQKLTRTKFSFKCTRENPMPKHRWESYLRQVKAMVVDHFVRSIKHQSKNLPKHYEVLFTGSEVPTGPTELSQVQRDKRKLGTICHALIAEHMFTPNLNRHTGDDAIIDTFTREDSV
Ga0210300_136348Ga0210300_1363481F069703MIDVVVLGCGPIRTGEGVAAPFIGVHILGEIRPAGGFDTLAESRWEDRIGPPIPVQKFNHTTINRRGPLIVRRIG
Ga0210300_141402Ga0210300_1414021F023855VIQYDGSLKTERYGEVRVVSLSSLSDVYQDVSYEGVQKYGSRDVTESSLVSSRSKGGLAGRRTTTFPNSETKFC
Ga0210300_144589Ga0210300_1445891F085780MRSKLKSLRILQILPNGCVYFDNSVYLKTFIRYNFSKKSLLSNFLDKKKLI
Ga0210300_145316Ga0210300_1453161F000068DVEDDVVECETIQDEKCADETSGYTTLTKCSKWPREECKVTKKAVKKYTPITGCTKEPRELCAPAGCGFKEGAEECFDKTQTVVQDAPKEECSLEPQRTCAHVTKLVPKLEPTEECVDVPKEVCTRARTNPRKVKKPVVKKWCYTPSAESGLA
Ga0210300_147294Ga0210300_1472941F067436LLNSVYDESIDFFFLSVWYSSLQTSSLQLFLSVLLDNYITSNLFQFSLTDEWVRGFMSSKDSALFVIYHPEIIFFKSQLLNNYFFNFLGDVNISAINYLDSQSLLTPIMLFPQLLFITYLGFLFVSFYFSFYSSSSKEESTVDADYLSASITIESEKELGSIDDILMPSIIIIYTFG
Ga0210300_147813Ga0210300_1478131F028089PAQAAMEIKFELDTEKAAKAAVAIATSYGLCRVSEHTEHPQLAAANAIALIVIIAILYGPRPALKRAPSAS
Ga0210300_147813Ga0210300_1478132F100410MTPAAITLLFKEAYDSFPPIEGKPTDDDLLSIKETILPLLMDIPYDQLEGVHSLTAILTEPARYATDHGGNNFRRPARLPLYDASIANDATTVVRVKAEAAHKSRRDDFA
Ga0210300_148796Ga0210300_1487961F010163HTIKALDFIKEETFSYYVQXLLLFXFTNLSNLRIKTNYFISYMYFSFINNQKLLSYVINISLSLTNTLINVNNINGNPKFFYSAGMFNLQKKQKTRQPKAIITILRALLLKSKFFKTKPAAVHFNNLFFKHQSSIFKKLKRKIFAKLVISYLYKAHNGCRLRKKKRIKIRTRTRKL
Ga0210300_151487Ga0210300_1514871F069484MAEACYTARATTKQQVLDGIAKLILQTNEHGQYTHDAILLLQKGIQRVLVSQFNPSDPGKGMVKLLKDGNILTREQSTDAITAGSVLKSAKKRADDLSTTTGKTILPTFTTRTEAQEEADRLNVINQSVIGAKEGVVEAVSKLVGSDITDAILRTADGSDFKSIDDYTLYEVMKVAIDGADRPTTNDVLEQLLGVINHPF
Ga0210300_151978Ga0210300_1519781F017797VVTETVSPPSLHVIGQILREGELVITKDSSTEGWFLSEVLRVLPNLVEVRYFTTPTPALENYEHCSVQKRSERLSEICFRRTWHVRFGKHVGRATYKPPYPNNEDLQVWKGVINNSDLDGMFLLRNVRIDAEGKLDEASLRLAAQLPISHEKLDTIEDELEGSPLIRQAPNLFTSSREILCSCVECSRLLSRDYTVARHTSTEQRTATSQSDND
Ga0210300_154402Ga0210300_1544021F000080MTFWQENYSFIKDVYDMRHQKMAEWMENVEKAISRIMADKVYTSAEFKRERDNFHALCKDLERAEVKKWLAHILEILMAERAKDQRNDEMGKLDNIIKKHEELIPTVMKTQVMVDLYWKCYAYGDELKPHIEFLDGIMLSSTRDIAPSCVENVDELIERQEKSLLQLETKRGVVKELIEKGKIILMNPDKPRFLEGHVQRIEVGWDDTKTKAQDRLKLLQETKNAWVGYAENNETIAADFEKAEEEIKKIKKRFNLAAAMDDLRKRQDIYNKTNSGINGLFKSINDNLTCMSITLPEDKKKILDKEVKAVSEKLEVVSRLEEKVKKVEEFCTQLNSFDVSLKTINDWMATATKELEDIRAAAGTMLPEDRVARTMDLQEDIASMLKS
Ga0210300_155934Ga0210300_1559341F000049NVEKAISRIMADKVYTSAEFKRERDNFHALCKDLERGEVKKWLQQILEILMAERAKEERKEQIAKLDALIKKHEDLIPLVLKTQVKVDLYWRCYAYGDELKPHIEFLDGIMLSSTRDIAPSCVENVDELIERQEKSLMQLETKRAIVKDLITKGKQLLENPDKPKFLDSHVQRI
Ga0210300_155981Ga0210300_1559811F098681DKASINLTGKDAAKLLEGLTKDPQLRSEDDPSILAEEQFPTDHHALLQGKTDGSSTDNIITILRWERQHTPHLAEEQKAMLTEQKNKTVKLFQFTATANNPWEEVQFNFWKHKVTNMVLSSIRLALNDDARSDVNKLLFATGDQNNVTVSSGDKRNISGLLICHPILLNSPFEEPAGIDLLLDDLLLERHPYTVAKANDNSGSYEADKAYSKIETLKAAALLALRSIYQDASHTFHVYLWDLLPGARENGSH
Ga0210300_156136Ga0210300_1561361F027881ILHKFFVMSLTVARSERVRGVLTHASFTRIKFNLSSARVSNAL
Ga0210300_159360Ga0210300_1593601F002698NKFMKLKIDRIDQHALTEFINRVKLIDSFIYMKIKDGQINSTVYLPQRDAVKHHSIPADKIFQVSEWPDTEKEMKIAFFEGNKVIEAIKHFEHDAIKGEFEFIENDDEFVASTLRIFNDELEITLSCSEPSLGFKDLSQEQRDAIFARADSKFDFKLDTHSIGKVKNLFTLDKDETFGIKSDVAGINVNGKSFNVVLTPDTNGNGKVTVYKKYLNLLDKEEQTVYVSDSKVVFESNDSHTLLTISTCQTA
Ga0210300_160749Ga0210300_1607491F002706CNLSIFIIALLANIQLISSLSTETQCHPQCSWKCDDPHCPAICDPVCEPPKCHTSCAEPKNAICDVKCEKPQCEIKCPDKGCEMFDCPKCVTVCKQPHCVTHCQAPKPECEPVCEEPKCDWKCHKPACPKPKCELVCENPNCVPKVDCCPCGVGAGGKNPPFPFFKETEGNKRCCGCDKKRHGSGAPSEIPQVVGVDGALTNTMPMYGIVDTPSHVYGVQRNAKVSMLRNPVALGSPQLTNVAAPNSRDYQNSMDKINLDM
Ga0210300_160899Ga0210300_1608991F004516ECEKGQLTQRPPIPYATPKAETILKASRETIKMKTTEGNVKTAVLGDNPGAEEYLQHLNSFLRMLSRKKWDVEMTRLTKAVSGAAALARKLERVPKGESVGQTTNRLALWEAAEGELKKAEALETVKAGLVYDLFRKTLKEDPELQWDRIVDDMHAKDPWEDLRGVKHIGLRRKSIASLWDCIDFHKLTVYSVDAAEWQRFYMLCNLKKPIKSSIRSHVTRMETLNKYLGLL
Ga0210300_163065Ga0210300_1630651F000044NMKGFTLLLLVGAAAADFVGHDHGNQLARAGRQEGAIQGGIDFSGCVQDAETGLCCVEKEETVQTLKKDPILECTHKNTEQCHYTYVTKFVPSQEEVCEENFEKTCQITFKQQAFNETVEKCYKPSVKECNGQGEEICQTVYESACTTKYVEKQPGKFVADTSCEKLPVEICGAGCVFTEGEEECHNKVITSIVDVPEEVCDLNPQKICKYITKLVPRLAPEHQCTIVPKETCHLKFTAPVPVDKPLLTKWCLDPTPAAPGESYHEIDARAPV
Ga0210300_163805Ga0210300_1638052F063389MQIGLLQILVIGLVVLILFGKLPNIIQVLKSAYLELSKKN
Ga0210300_170744Ga0210300_1707441F083434MTYTPAAKTNEPTDWKALWISFGHGAFSKKNDSHGSDLSFNRSSRRGECGLSNDGTCLRFPIFCMGCCGEDEWVVDVAEIPVPTVIDRLFFEKVAKLIQFSCDCNPEYSVEAFDWDWASFHKNILLPNRMHIRSVMQLSDTITDRVVYSV
Ga0210300_171072Ga0210300_1710721F002882MQYAVQVLFLLAVGGSEAARQLRGQVNAERGQRSLLNTFPFNAHAHDHHAHVETPARLIPSQSIAPRGDRQGAADTDVSFPAVAASSPGADGKRCIDKVEMVEETEYDEVVQCDHSYDRRCHTTYVTNYESQQEEECEENFRKNCFINYEKIAFNETVQVCRTPLVKDCDVQGPEICRTEYESECWTKQEVHDVEDDVVECETIQDEKCA
Ga0210300_173278Ga0210300_1732782F048997MTLFFNLGLLESETQCDSTKLVETLRLHFIRKSIPKNQYSKIKPIFNLKGNSFLINPARLFTDTSTDIVHKAQYIRLAGRRNYAIYKHYGYTYLDLSFYSDIDLNAIKSNPLLKITENKINFKYEEK
Ga0210300_177732Ga0210300_1777321F007402GGKFLPKIKGFFPHDFTLIASVVGESVIGHGIGGKYIPIMARLAKARRWSKR
Ga0210300_178456Ga0210300_1784561F004516TKLTKAVSSAAALVRKHEKVPKGESTAQTTIRLGLWEAAEDGLKKAEALETVKAGLVYDLFRKTLKEDPELQWDRIVDDVHTKDPWEDLRGAKHDGIRRKSMASLWDCIDFHKLTVYSVDAAERQRFYMLCNLKKPSKSSIRSHVTRMETLNKYLGLLPTIKNSPQAVAS
Ga0210300_185227Ga0210300_1852271F006296TEPTYSQAIKTRHAARVKATKDRIDLRLRGLTTEKAAIEAELIAGSSTDRTLLKELREVEDQMAKAEIELIDEVDMKLTEDEKISHANAWRSHRETTESLKKSRGKVYSLLFGQCTQVLVDKMKQDTDWVMISESFDPTLLFKLIEKFVLKQSDNQYATAVLIAEQLSILSFRQDD
Ga0210300_186317Ga0210300_1863171F097458TWIIELNHTLHRSYKLPPISLSLTFAALLPRRGISALADTPRLFPQHRIPIDSRYELLGSPILFDTRTLVVRRQIEK
Ga0210300_186729Ga0210300_1867291F079622SPPPRHRRPQTQIDFEDRKLYDVGNDCLMTIDGTDFRVPQTGEAKTGNWFASHKYAGKSALRYEIGVSIIGGDLVWIQGPYPAGRFNDIAIFNKVLRHFLEEGERVEANNGYVGATDKIKCPDNPCNRVENEGMQSRARYRHETINGRFKSWGILRQTYRHDIRRHGEVFR
Ga0210300_189329Ga0210300_1893291F000237TLTIGANIFXSLFNFTYKTYYIIFTNKHLNVDQLTRLMVLHYFTPXYYLYLVKLHVMFCHESXDTDSGEGVYEDKSGTYISXFYDGMLKEFQDAXFXVLFVFIYFIEHHFNASTVNYFFFERXNISELDEIRFYGVAPHXYFRPLMGLLVVSPSHYEGLMXMGLXFVLLAVLPIIYNFYNANQSQLPVIPMQSSLLQTSCFVIFMLSMYCTASMLPCGRYYYDPEGGYVGNPXVKFSYQYSYLYLAXIIHHLDLIEHSSYQYTQSYLRKSQTQYLTCHRAVSRSSS
Ga0210300_193123Ga0210300_1931231F081389KGSEPLVEGFLWGRQEDSTRRFECQYVSETQILSCFRGLIECEAVANFELSQNYEIYGVGTTDMIKFNLYPRNLSDLAYGDCKQQANNGNWVELSFYASGEQTLATTRGLMVKDAKCFKRIIDSFKVIDNQVTVELSNKQKVTMLGYINYLSVDVLRVQREQNNGTLPFGEALRKPTVDLGVGKKMDRIETDSIVAGNPFLAPVSGFIWGSLEDTNRRFECQYSSDLFTLSCFRGLVRCETITRFGELSQTYEIFGLGTTDMINYHLYPRNLSDLTFADFRVPTVSGKTVELSLLKSGMEGYGLVIRDAVCYQRIVDFLRVITEPVMVDVTGDNTNTKVQMMSYIINV
Ga0210300_193930Ga0210300_1939301F053809EKADIISDISSITKILCLSPYVKLPMMVTMLRQEIYTHYLFHNSYQYNSIMRPYTYTPKSHIRPYIRNTLLLIKDQLPLLHLHVNYLSQLQLINRRRLHDFDVLSGKRHTRGAGAIRVAEIGAAYAEDRIRAHLGALIVDNNDLLAEWFRLKTYTDGHTPLICSNRPALQMNTMPFDTHGVCTIQGDGIPHPADMRSTIQIIERILLPHAQSAARCCTITDYRNHNAAYMCVREFVRETKRSLDDVRECLIFLQYDEIDLWHSVQNFEYNIEDSSTIICELFA

 ⦗Top⦘



© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.