Metagenome / Metatranscriptome Family F059945

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059945
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	82 residues
Representative Sequence	MRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP
Number of Associated Samples	64
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	48.12 %
% of genes near scaffold ends (potentially truncated)	27.07 %
% of genes from short scaffolds (< 2000 bps)	88.72 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (82.707 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton (54.887 % of family members)
Environment Ontology (ENVO)	Unclassified (55.639 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (61.654 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.80% β-sheet: 0.00% Coil/Unstructured: 42.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00665	rve	1.50
PF00078	RVT_1	1.50
PF07690	MFS_1	0.75
PF01728	FtsJ	0.75
PF00098	zf-CCHC	0.75
PF00397	WW	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	1.50
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	1.50
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	1.50
COG4584	Transposase	Mobilome: prophages, transposons [X]	1.50
COG0293	23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ	Translation, ribosomal structure and biogenesis [J]	0.75
COG1189	Predicted rRNA methylase YqxC, contains S4 and FtsJ domains	Translation, ribosomal structure and biogenesis [J]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.71 %
All Organisms	root	All Organisms	17.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.71 %
cellular organisms	root	All Organisms → cellular organisms	17.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.71 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	15.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.71 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	14.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.71 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	14.29 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.71 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	14.29 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	1.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.71 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	14.29 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	1.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.71 %
Coscinodiscophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae	13.53 %
Klebsiella/Raoultella group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group	1.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.71 %
Thalassiosirophycidae	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae	13.53 %
Klebsiella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella	1.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.71 %
Thalassiosirales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	13.53 %
Klebsiella aerogenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella aerogenes	1.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.71 %
Thalassiosiraceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae	13.53 %
Klebsiella aerogenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella aerogenes	1.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.71 %
Thalassiosira	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	13.53 %
Klebsiella aerogenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella aerogenes	1.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.71 %
Thalassiosira pseudonana	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	7.52 %
Thalassiosira oceanica	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	6.02 %
Klebsiella aerogenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella aerogenes	1.50 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352003\|2199772589	Not Available	2015	Open in IMG/M
3300001273\|B570J13893_104671	Not Available	911	Open in IMG/M
3300005044\|Ga0071351_1087887	Not Available	527	Open in IMG/M
3300005527\|Ga0068876_10547028	Not Available	631	Open in IMG/M
3300005528\|Ga0068872_10227342	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	1055	Open in IMG/M
3300005582\|Ga0049080_10197874	Not Available	665	Open in IMG/M
3300005941\|Ga0070743_10251896	Not Available	574	Open in IMG/M
3300005942\|Ga0070742_10121475	Not Available	723	Open in IMG/M
3300006484\|Ga0070744_10185409	Not Available	594	Open in IMG/M
3300007543\|Ga0102853_1084916	Not Available	583	Open in IMG/M
3300007551\|Ga0102881_1133954	Not Available	685	Open in IMG/M
3300007552\|Ga0102818_1053439	Not Available	796	Open in IMG/M
3300007557\|Ga0102821_1097478	Not Available	750	Open in IMG/M
3300007561\|Ga0102914_1237438	Not Available	558	Open in IMG/M
3300007561\|Ga0102914_1276320	Not Available	514	Open in IMG/M
3300007585\|Ga0102916_1144967	Not Available	641	Open in IMG/M
3300007600\|Ga0102920_1186626	Not Available	666	Open in IMG/M
3300007636\|Ga0102856_1011117	Not Available	1255	Open in IMG/M
3300007636\|Ga0102856_1092461	Not Available	504	Open in IMG/M
3300007658\|Ga0102898_1042424	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	1024	Open in IMG/M
3300007661\|Ga0102866_1091731	Not Available	753	Open in IMG/M
3300007708\|Ga0102859_1106883	Not Available	807	Open in IMG/M
3300007715\|Ga0102827_1129369	Not Available	577	Open in IMG/M
3300007716\|Ga0102867_1037861	Not Available	1261	Open in IMG/M
3300007861\|Ga0105736_1107013	Not Available	611	Open in IMG/M
3300007972\|Ga0105745_1258942	Not Available	560	Open in IMG/M
3300008021\|Ga0102922_1047140	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	1339	Open in IMG/M
3300008106\|Ga0114339_1050837	Not Available	1982	Open in IMG/M
3300008115\|Ga0114348_1066915	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	842	Open in IMG/M
3300008115\|Ga0114348_1105549	Not Available	620	Open in IMG/M
3300008115\|Ga0114348_1127779	Not Available	533	Open in IMG/M
3300008121\|Ga0114356_1291567	Not Available	1069	Open in IMG/M
3300008122\|Ga0114359_1226207	Not Available	662	Open in IMG/M
3300008263\|Ga0114349_1022271	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	3196	Open in IMG/M
3300008263\|Ga0114349_1022496	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	3177	Open in IMG/M
3300008263\|Ga0114349_1040633	Not Available	2287	Open in IMG/M
3300008263\|Ga0114349_1054149	Not Available	1921	Open in IMG/M
3300008263\|Ga0114349_1056611	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1868	Open in IMG/M
3300008263\|Ga0114349_1091484	Not Available	1353	Open in IMG/M
3300008263\|Ga0114349_1095012	Not Available	1316	Open in IMG/M
3300008263\|Ga0114349_1111097	Not Available	1173	Open in IMG/M
3300008263\|Ga0114349_1111158	Not Available	1787	Open in IMG/M
3300008263\|Ga0114349_1119445	Not Available	1603	Open in IMG/M
3300008263\|Ga0114349_1140226	Not Available	979	Open in IMG/M
3300008263\|Ga0114349_1145776	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	949	Open in IMG/M
3300008263\|Ga0114349_1160374	Not Available	878	Open in IMG/M
3300008263\|Ga0114349_1170770	Not Available	833	Open in IMG/M
3300008263\|Ga0114349_1180528	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	793	Open in IMG/M
3300008263\|Ga0114349_1184973	Not Available	776	Open in IMG/M
3300008263\|Ga0114349_1187830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella aerogenes	766	Open in IMG/M
3300008263\|Ga0114349_1214803	Not Available	675	Open in IMG/M
3300008263\|Ga0114349_1220132	Not Available	659	Open in IMG/M
3300008263\|Ga0114349_1230868	Not Available	627	Open in IMG/M
3300008263\|Ga0114349_1247705	Not Available	582	Open in IMG/M
3300008263\|Ga0114349_1248580	Not Available	580	Open in IMG/M
3300008263\|Ga0114349_1250189	Not Available	575	Open in IMG/M
3300008263\|Ga0114349_1265858	Not Available	538	Open in IMG/M
3300008263\|Ga0114349_1268916	Not Available	531	Open in IMG/M
3300008263\|Ga0114349_1269621	Not Available	530	Open in IMG/M
3300008265\|Ga0114361_1000488	All Organisms → cellular organisms → Eukaryota	10550	Open in IMG/M
3300008265\|Ga0114361_1001781	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	7424	Open in IMG/M
3300008265\|Ga0114361_1010432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella aerogenes	3599	Open in IMG/M
3300008265\|Ga0114361_1011618	Not Available	3386	Open in IMG/M
3300008265\|Ga0114361_1016996	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	2710	Open in IMG/M
3300008265\|Ga0114361_1018182	Not Available	2592	Open in IMG/M
3300008265\|Ga0114361_1018305	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	2579	Open in IMG/M
3300008265\|Ga0114361_1020462	Not Available	2399	Open in IMG/M
3300008265\|Ga0114361_1026059	Not Available	2036	Open in IMG/M
3300008265\|Ga0114361_1039764	Not Available	1533	Open in IMG/M
3300008265\|Ga0114361_1041668	Not Available	1488	Open in IMG/M
3300008265\|Ga0114361_1047076	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	1378	Open in IMG/M
3300008265\|Ga0114361_1050598	Not Available	1320	Open in IMG/M
3300008265\|Ga0114361_1057642	Not Available	1220	Open in IMG/M
3300008265\|Ga0114361_1064630	Not Available	1142	Open in IMG/M
3300008265\|Ga0114361_1067557	Not Available	1114	Open in IMG/M
3300008265\|Ga0114361_1072076	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1074	Open in IMG/M
3300008265\|Ga0114361_1079728	Not Available	1016	Open in IMG/M
3300008265\|Ga0114361_1086185	Not Available	974	Open in IMG/M
3300008265\|Ga0114361_1088250	Not Available	961	Open in IMG/M
3300008265\|Ga0114361_1088666	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	959	Open in IMG/M
3300008265\|Ga0114361_1089311	Not Available	955	Open in IMG/M
3300008265\|Ga0114361_1093341	Not Available	933	Open in IMG/M
3300008265\|Ga0114361_1098652	Not Available	906	Open in IMG/M
3300008265\|Ga0114361_1100334	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	898	Open in IMG/M
3300008265\|Ga0114361_1103319	Not Available	1168	Open in IMG/M
3300008265\|Ga0114361_1111494	Not Available	849	Open in IMG/M
3300008265\|Ga0114361_1119560	All Organisms → cellular organisms → Eukaryota	819	Open in IMG/M
3300008265\|Ga0114361_1122260	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	809	Open in IMG/M
3300008265\|Ga0114361_1122283	Not Available	809	Open in IMG/M
3300008265\|Ga0114361_1122844	Not Available	807	Open in IMG/M
3300008265\|Ga0114361_1134124	Not Available	771	Open in IMG/M
3300008265\|Ga0114361_1171772	Not Available	677	Open in IMG/M
3300008265\|Ga0114361_1174670	Not Available	671	Open in IMG/M
3300008265\|Ga0114361_1175699	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	668	Open in IMG/M
3300008265\|Ga0114361_1180711	Not Available	658	Open in IMG/M
3300008265\|Ga0114361_1256436	Not Available	537	Open in IMG/M
3300008265\|Ga0114361_1264824	Not Available	526	Open in IMG/M
3300008265\|Ga0114361_1266805	Not Available	524	Open in IMG/M
3300008265\|Ga0114361_1274287	Not Available	514	Open in IMG/M
3300008966\|Ga0114357_1167493	Not Available	910	Open in IMG/M
3300008996\|Ga0102831_1182218	Not Available	695	Open in IMG/M
3300009002\|Ga0102810_1223014	Not Available	580	Open in IMG/M
3300009024\|Ga0102811_1333508	Not Available	570	Open in IMG/M
3300009026\|Ga0102829_1201856	Not Available	646	Open in IMG/M
3300009059\|Ga0102830_1115197	Not Available	794	Open in IMG/M
3300009081\|Ga0105098_10273874	Not Available	803	Open in IMG/M
3300009086\|Ga0102812_10310451	Not Available	858	Open in IMG/M
3300009086\|Ga0102812_10691732	Not Available	562	Open in IMG/M
3300009169\|Ga0105097_10124222	Not Available	1416	Open in IMG/M
3300011910\|Ga0119893_100406	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	4676	Open in IMG/M
3300019207\|Ga0180034_1140636	Not Available	768	Open in IMG/M
3300019214\|Ga0180037_1187541	Not Available	622	Open in IMG/M
3300020565\|Ga0208718_1093066	Not Available	530	Open in IMG/M
3300021284\|Ga0210299_148375	Not Available	819	Open in IMG/M
3300021296\|Ga0210300_131860	Not Available	632	Open in IMG/M
3300021312\|Ga0210306_1147517	Not Available	831	Open in IMG/M
3300021845\|Ga0210297_1019839	Not Available	550	Open in IMG/M
3300021849\|Ga0210304_1090259	Not Available	695	Open in IMG/M
3300027196\|Ga0208438_1083126	Not Available	519	Open in IMG/M
3300027198\|Ga0208163_1076053	Not Available	533	Open in IMG/M
3300027204\|Ga0208924_116993	Not Available	588	Open in IMG/M
3300027223\|Ga0208169_1071535	Not Available	609	Open in IMG/M
3300027254\|Ga0208177_1064856	Not Available	683	Open in IMG/M
3300027256\|Ga0208932_1069005	Not Available	621	Open in IMG/M
3300027320\|Ga0208923_1094692	Not Available	528	Open in IMG/M
3300027800\|Ga0209800_10261996	Not Available	736	Open in IMG/M
3300027836\|Ga0209230_10722067	Not Available	547	Open in IMG/M
3300034050\|Ga0335023_0445929	Not Available	677	Open in IMG/M
3300034096\|Ga0335025_0535694	Not Available	585	Open in IMG/M
3300034105\|Ga0335035_0679743	Not Available	531	Open in IMG/M
3300034107\|Ga0335037_0747173	Not Available	507	Open in IMG/M
3300034121\|Ga0335058_0059502	Not Available	2228	Open in IMG/M
3300034355\|Ga0335039_0675419	Not Available	500	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.25%
Engineered	Engineered	0.75%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.25%
Wastewater	Engineered → Wastewater	0.75%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	67.67%
Marine	Environmental → Aquatic → Marine	31.58%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.75%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	59.40%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	27.82%
Lentic	Environmental → Aquatic → Freshwater → Lentic	6.02%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.26%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.50%
Coastal	Environmental → Aquatic → Marine → Coastal	1.50%
Pond	Environmental → Aquatic → Freshwater → Pond	0.75%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	59.40%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	27.82%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	3.76%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.26%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.26%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.50%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.50%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.75%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	54.89%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	27.82%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.51%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.26%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.26%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.50%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	1.50%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.50%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.75%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.75%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater, Plankton	0.75%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.75%
Wastewater	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Wastewater	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352003	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300001273	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300005044	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0048	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300005942	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.757	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007543	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-3	Environmental	Open in IMG/M
3300007551	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-3	Environmental	Open in IMG/M
3300007552	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.571	Environmental	Open in IMG/M
3300007557	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715	Environmental	Open in IMG/M
3300007561	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3	Environmental	Open in IMG/M
3300007585	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-3	Environmental	Open in IMG/M
3300007600	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3	Environmental	Open in IMG/M
3300007636	Estuarine microbial communities from the Columbia River estuary - metaG 1371A-3	Environmental	Open in IMG/M
3300007658	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-3	Environmental	Open in IMG/M
3300007661	Estuarine microbial communities from the Columbia River estuary - metaG 1546A-3	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300007715	Estuarine microbial communities from the Columbia River estuary - metaG S.751	Environmental	Open in IMG/M
3300007716	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-3	Environmental	Open in IMG/M
3300007861	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372B_3um	Environmental	Open in IMG/M
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental	Open in IMG/M
3300008021	Estuarine microbial communities from the Columbia River estuary - metaG 1569A-3	Environmental	Open in IMG/M
3300008106	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-53-LTR	Environmental	Open in IMG/M
3300008115	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-100-LTR	Environmental	Open in IMG/M
3300008121	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-100-LTR	Environmental	Open in IMG/M
3300008122	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample HABS-E2014-0124-100-LTR	Environmental	Open in IMG/M
3300008263	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-53-LTR	Environmental	Open in IMG/M
3300008265	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0126-100-LTR	Environmental	Open in IMG/M
3300008966	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-53-LTR	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009002	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.573	Environmental	Open in IMG/M
3300009024	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300011910	Wastewater microbial communities from municipal sewage treatment plant in Nanjing, China - JXZ_IW_meta	Engineered	Open in IMG/M
3300019207	Estuarine microbial communities from the Columbia River estuary - R.871 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019214	Estuarine microbial communities from the Columbia River estuary - R.1189 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020565	Freshwater microbial communities from Lake Mendota, WI - 29APR2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300021284	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R878 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021296	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R881 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021312	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1072 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021845	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R876 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021849	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1037 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027196	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545 (SPAdes)	Environmental	Open in IMG/M
3300027198	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.753 (SPAdes)	Environmental	Open in IMG/M
3300027204	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-3 (SPAdes)	Environmental	Open in IMG/M
3300027223	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3 (SPAdes)	Environmental	Open in IMG/M
3300027254	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3 (SPAdes)	Environmental	Open in IMG/M
3300027256	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-3 (SPAdes)	Environmental	Open in IMG/M
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental	Open in IMG/M
3300027800	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 8 (SPAdes)	Environmental	Open in IMG/M
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034096	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15Oct2015-rr0098	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034107	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M
3300034355	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Oct2015-rr0135	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2199925074	2199352003	Freshwater	MRSGVHVACFYMHARRVVSRFDAKGHQELSGYGLYESLLTYVAHMDLVGDPLQDTCHARXSKILITKIRKILYVGYRRIFP
B570J13893_1046712	3300001273	Freshwater	MRLDVLVACFYMHARRVVPRFDAKEHQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP*
Ga0071351_10878871	3300005044	Freshwater, Plankton	MLKRVMRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP*
Ga0068876_105470282	3300005527	Freshwater Lake	MRLDVLVACFYMHVRRVVSRLDAKEHQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP*
Ga0068872_102273423	3300005528	Freshwater Lake	CFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP*
Ga0049080_101978742	3300005582	Freshwater Lentic	MRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP*
Ga0070743_102518961	3300005941	Estuarine	VIRSDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP*
Ga0070742_101214752	3300005942	Estuarine	MRSGVHVACFYMHARRVVSRFDAKGHQELSGYGLYESLLTYVAHMDLVGDPLQDTCHARVSEILFTKIRKILYVGYRRIFP*
Ga0070744_101854091	3300006484	Estuarine	MRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARVSEILFTKIRKILYVGYRRIFP*
Ga0102853_10849161	3300007543	Estuarine	MLKRVMRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFL*
Ga0102881_11339541	3300007551	Estuarine	MLKRVMRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARVSKILITRICKILYVGYRRIFP*
Ga0102818_10534392	3300007552	Estuarine	MLKRVMRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPRQDTCHARASKILITRIRKILYVGYRRIFP*
Ga0102821_10974781	3300007557	Estuarine	MRSGVRVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP*
Ga0102914_12374381	3300007561	Estuarine	MLKRVMRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHVRASKILITRIRKILYVGYRRIFP*
Ga0102914_12763201	3300007561	Estuarine	MRSGVHVACFYMHARRVVSRFDAKGHQELSGCDLYESLLTCVAHMDLVGDPLQDTCHARVSKILFTKIRKILYVGYRRIFL*
Ga0102916_11449671	3300007585	Estuarine	MRSNVLGACFYMHARRVVSRFDAKGHQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARVSEILFTKIRKILYVGYRRIFP*
Ga0102920_11866261	3300007600	Estuarine	MLKRVMRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAPMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP*
Ga0102856_10111172	3300007636	Estuarine	MRSGVHVACFYMHARRVVSRFDAKGHQELSGYELYESLLTYVAHMDLVGDPLQDTCHARVSEILFTKIRKILYVGYRRIFP*
Ga0102856_10924612	3300007636	Estuarine	MRLDVLVACFYMHARRVVSRFDANADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARVFKILITRIRKILYIGYRRIFP*
Ga0102898_10424241	3300007658	Estuarine	MRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARVSKILITRIRKILYVGYRRIFP*
Ga0102866_10917312	3300007661	Estuarine	MRLDVLVACFYMHAWLVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP*
Ga0102859_11068831	3300007708	Estuarine	MRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARVSKILITRIRKILYVGYRRNFP*
Ga0102827_11293691	3300007715	Estuarine	ELILNCFKKERAMRSGVHVACFYMHARRVVSRFDAKGHQELSGYGLYESLLTYVAHMDLVGDPLQDTCHARVSEILFTKIRKILYVGYRRIFP*
Ga0102867_10378612	3300007716	Estuarine	MRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILCVGYRRIFP*
Ga0105736_11070132	3300007861	Estuary Water	MLKRVMRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARVSKILITRIRKILYVGYRRIFP*
Ga0105745_12589421	3300007972	Estuary Water	IRKLLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP*
Ga0102922_10471401	3300008021	Estuarine	ACFYMHARRVVSRFDAKADQELSGYDMYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP*
Ga0114339_10508371	3300008106	Freshwater, Plankton	MLKRVMRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILIT
Ga0114348_10669151	3300008115	Freshwater, Plankton	VLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHVRASKILITRIRKILYVGYRRIFP*
Ga0114348_11055491	3300008115	Freshwater, Plankton	MRLDVLVACFYMHARRVVSRFDAKAGQEMSGYDLYESLLTYVAHMDLVRDPLQDTCHARASKILITRIRKILYVVYRRIFP*
Ga0114348_11277791	3300008115	Freshwater, Plankton	MHARHVVSRFDARGHQELSGYGLYESLLTYVAHMDLVGDPLQDTCHALVSEILFTKIRTILYVGYRRIFP*
Ga0114356_12915672	3300008121	Freshwater, Plankton	MLKRVMRLDVLVACFYMHARRVVSRFDAEEHQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITKIRRILYVGYRRIFP*
Ga0114359_12262071	3300008122	Freshwater, Plankton	MRSGVRVACFYMHARHVVSRLDAKGHQELSGYDLYESLLTYVAHMDLVGDPLQDTSHACASKILITKIRNILYVGYRRIFPKYVA*
Ga0114349_10222713	3300008263	Freshwater, Plankton	MLKRVMRLDVLVACFCMHARRRVVSRFDAKADQELSGYDLCESLLTYVAHMDLVGDPLQDTCHARASKKLITRFCKILYVGYRRICP*
Ga0114349_10224965	3300008263	Freshwater, Plankton	LDVLIACFCMHARRVVPRLDAKEHQELSGFTLYECLLTYVAHLDLVGVPVQGTRHANASKILITKIRKIFYVGYRRIFP*
Ga0114349_10406333	3300008263	Freshwater, Plankton	MRLDVLVACFYMHARCVVSKFDAEEHQELSGYDLYESLLTYVAHMDLIGDPLQDTCHARASKILITKIRKILYVGYRRIFP*
Ga0114349_10541493	3300008263	Freshwater, Plankton	MDVLVACFYMRARRVVSRFDAKAGQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYGRIFP*
Ga0114349_10566111	3300008263	Freshwater, Plankton	MRLDVLVACFYMHARHVVSRFDAKEHQELSGYDLYESLFTNIAHMGLVGDPLQDTCHARASKILITKIRKILYVGYRRIFP
Ga0114349_10914841	3300008263	Freshwater, Plankton	MRLDVLVACFYMHARRVVSRLDAKADQELSGYGLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRK
Ga0114349_10950121	3300008263	Freshwater, Plankton	MRLDVLIACFYMHARRVVSRFDAKADQEWSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILKILYVGYRRIFP*
Ga0114349_11110972	3300008263	Freshwater, Plankton	MRLDVLVACFYMHARRVVSRFDAEEHQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARVSNILITKIRKMLYVGYRRIFP*
Ga0114349_11111582	3300008263	Freshwater, Plankton	MLKRVMRLDMLVACFYMHARHVVSRFDAEEHQHLSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILIT
Ga0114349_11194452	3300008263	Freshwater, Plankton	MHARRVVSRFDAKADQELSGYDLYESLLTYVVHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP
Ga0114349_11402262	3300008263	Freshwater, Plankton	MRLDVLVACFYMRARRVVSRFDAKAGQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARESKIHSEIRKILYVGYRRIFL*
Ga0114349_11457761	3300008263	Freshwater, Plankton	MRLDVLVACFYMHARRVVSRLDAEEHQELSGYDLYESLLTYVAHMDLVGDPLQDTSHARASKILITKIRNILYVGYRRIFPKYVA*
Ga0114349_11603742	3300008263	Freshwater, Plankton	MRLDVLVACFYMHARHVVSRLDAKEHQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITKIRKILYVGYRRIFP*
Ga0114349_11707701	3300008263	Freshwater, Plankton	MRLDVRVACFYIHARRVYRDLDVEKHQELSGYALYESLLTYVAHMDLVGDPLQGTCHAHVSEILITKIRKILYVGYCRILFP*
Ga0114349_11805282	3300008263	Freshwater, Plankton	MLKRVMRLDVLIACFYMHARRVVSRFDAKADQELSGYDLYESLLTHVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYHRIFP*
Ga0114349_11849732	3300008263	Freshwater, Plankton	MRLDGLVACFYMHARRVVSRFDAKADQELSGYDLNESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKIL
Ga0114349_11878302	3300008263	Freshwater, Plankton	MRLDVLVACFYMHARRVVSRFDAKAGQELSGYDLYESLLTFVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRR
Ga0114349_12148032	3300008263	Freshwater, Plankton	MLKGVMRLDVLVACFYMHARRVVSRFDAEEHQLLSGYDLYESLLTYVAHMNLVGDPLQDTCHARASKILITRIRKILDVGYRRIFP*
Ga0114349_12201321	3300008263	Freshwater, Plankton	MLKRVMRLDVLVACFYMHARRVVWRFDAKEHQELSGYDLYESLLTYVAHVDLVGDPLQDTCHAHASKILITKIRRILYVGYRRIFP*
Ga0114349_12308681	3300008263	Freshwater, Plankton	MLKRVMRLDVLVTCFYMHARRVVSRFDAKEHQELSGYDLYESLLTYIAHMDLVGDPLQDTCHARASKILITKIRRILYVRHRRIFP*
Ga0114349_12477052	3300008263	Freshwater, Plankton	MRSGVHVACFYMHARRVVSRFDAQGHQELSGYGLYESLLTYVAHMDLVGDPLQDTCHARVSEILFTKIRKILYVGYRRIFP*
Ga0114349_12485801	3300008263	Freshwater, Plankton	MRLDVLVVCFYMHARCVVSRLDAKEHQESSGYNLYESLLTYIAHMDLVGDPLQDTSHARASKILITKIRNILYVGYRRIFPKYVA*
Ga0114349_12501891	3300008263	Freshwater, Plankton	MRLDVLVACFYMRARRVVSRFDAKAGQELSGYNLYESLLTYVAHMDLVGDPLQDTCHVRASKILITRIRKILYVGYRRIFP*
Ga0114349_12658581	3300008263	Freshwater, Plankton	MRKRVMRLDVLVAYFYMHARRVVSRLDAKEHQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITKIHKILYVGYRRIFP*
Ga0114349_12689161	3300008263	Freshwater, Plankton	MRSGVHVACFYMHARRVVSRFDAKGHQELSGYGLYESLLTYVAHMDLIGDPLQDTCHARVSEILFTKIRKILYVGYRRIFP*
Ga0114349_12696212	3300008263	Freshwater, Plankton	MLKRVMRLDVLVACFYMHARHLVSRFDAKEHQELSGYDLYESLLTYIAHMDLVGDPLQDTCQACAPKILITKIRKILYVGYRRIFP*
Ga0114361_100048811	3300008265	Freshwater, Plankton	MLKRVMRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHACSSKILITRIRKILYVGYRRIFPQYVA*
Ga0114361_100178111	3300008265	Freshwater, Plankton	MRLDVLVACFYMRARRVVSRFDAKAGQELSGYDLYESLLTYVAHMDLIGDPLQDTCHTRASKILITRIHKFLYVGYRRIFP*
Ga0114361_10104321	3300008265	Freshwater, Plankton	MLKRVMRLDVLVACFYMHARRVVSRFDAKAGQELSGYDLYESLLTFVAHMDLVGDPLQDTCHARASKILITRIRKILYVG*
Ga0114361_10116185	3300008265	Freshwater, Plankton	MLKRVMRLDVLVACFYMHARRVVLRLDAEEHQDLSGYNLYESLLTYVAHMDLVGDPLQDTCHARASKILITKICKILYVGYRRIFRKYVA*
Ga0114361_10169961	3300008265	Freshwater, Plankton	MLKRVMRLDVLVACFYMHARCVVSRLDAKEHQESSGYNLYESLLTYVAHMDLVGDPLQDTSHARASKILITKIRNILYVGYRRI
Ga0114361_10181821	3300008265	Freshwater, Plankton	MRLDVLVACFYMHARHVVSRFDAEEHQELSGYDLYESLLTYIAHMDLVGDPLQDTCHARASKILITKIRKILYVGYCRIFL*
Ga0114361_10183051	3300008265	Freshwater, Plankton	MLKRVMRLDVLVACFYMHARHVVSRFDAEEHQELSGYDLYESLLTYVAHMDLIGDPLQDTCHARASKILITRIRKILYVGYRRIFP*
Ga0114361_10204625	3300008265	Freshwater, Plankton	MDVLVACFYMRARRVVSRFDAKAGQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILY
Ga0114361_10260591	3300008265	Freshwater, Plankton	LDVLVVCFYMHARHVVPRLDAEEHQELSGYALYESLLTYVAHLDLVGVPVQGIRHARASKILITKIRKIFYVGYRRIFP*
Ga0114361_10397642	3300008265	Freshwater, Plankton	MRLDVLVAYFYMHARRVVSRLDAKEHQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITKIHKILYVGYRRIFP*
Ga0114361_10416682	3300008265	Freshwater, Plankton	MRLDVLVASFYMHARRVVPRFDAKEHQELSGYALYESPLTYVAHLDLVGVLVQGIPVTRVRPRFITKIRKILYVGYRRIFPKYVA*
Ga0114361_10470763	3300008265	Freshwater, Plankton	MRLDVLVVCFYMHARCVVSRLDAKEHQESSGYNLYESLLTYIAHMDLVGDPLQDTSHARASKILITKIRNILYVGYRRI
Ga0114361_10505982	3300008265	Freshwater, Plankton	MRLDVLVACFYIHVLRVVSRLDDEEHQELSGYDLYESLFTYVARLDLVGDPLQDTCHARASKILITKIRKILYVGYRRIFP*
Ga0114361_10576421	3300008265	Freshwater, Plankton	MRSDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHIDLVGDPLQDTCHARASKILITRIRKILYIGYRRIFL*
Ga0114361_10646303	3300008265	Freshwater, Plankton	MLKRVMRLDVLVACFYMHAWRVVSRLDAKEHLELSGYDLYESLLTCIAHMDLVGDPLQDTCHAGASKILITKICRILYVGYRRIFP*
Ga0114361_10675572	3300008265	Freshwater, Plankton	MRVMRLDVLVACFYMHARRVVSRLDAKEHQELSGYDLYESLLTCVAHMDLVGDPLQNTSHARASKILITKIRRILYVGYRRIFP*
Ga0114361_10720761	3300008265	Freshwater, Plankton	VVSRLDAEEHQELSGYDLYESLLTYVAHMDLVGDPLQDTSHARASKILITKIRNILYVGYRRIFPKYVA*
Ga0114361_10797281	3300008265	Freshwater, Plankton	MRLDVLVACFYMHARRVVSRLDAKEHQESSGYDLYESLLTYVAHMDLVGDPLQDTSHARASKILITRIRNILYVGYRRIFPKYVAWTYLDL*
Ga0114361_10861851	3300008265	Freshwater, Plankton	MRLDVLVTCFYMHARHVVSRFDAKEHQELSGYDLYENLLTYVAHMDLVGDPLQDTCHARASKILITKIRRILYV
Ga0114361_10882501	3300008265	Freshwater, Plankton	MRLDVLVACFYMHVQCVVSRLDAKGHQELSGYDLYESLLTYVAHMDLAGDPLQDTCHARASKILITKIRKILYIGYRRIFPLYV
Ga0114361_10886661	3300008265	Freshwater, Plankton	MRLDVLVTCFYMQTRRVVSRFDAKAGQELSGYDLYESLLTYVAHMDLVGDSLQDTCHVRASKILITRIRKILYVGYRRIFP*
Ga0114361_10893111	3300008265	Freshwater, Plankton	MRSGVHVACFYMHARRVVSRFDAKGHQELSGCGLYESLLTYVAHMDLVGDALQDTCHARVSEILFTKIRKILYVGNRRIFP*
Ga0114361_10933411	3300008265	Freshwater, Plankton	FYMHARHVVSRFDAKEHQELSGYDLYESLLTYVAHMDLVGDPLQDTCHAGASKILITKIRRILYVGYRRIFP*
Ga0114361_10986521	3300008265	Freshwater, Plankton	MLKRVMRLDVLVACFYMHARRVVSRLDAKADQELSGYGLYESLLTYVAHMDLVGDPLQDTCHARASKILITRVRKILYVGYRRIFP*
Ga0114361_11003341	3300008265	Freshwater, Plankton	MPNRVMRLDVLVACFYMRAWRVVSRFDTKAGQELSGYDLYERLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYV
Ga0114361_11033191	3300008265	Freshwater, Plankton	MRARRVVSRFDAKAGQEMSGYDLYESLLTYVAHMDLVRDPLQDTCHARASKILITRIRKILYVGYRRIFP*
Ga0114361_11114941	3300008265	Freshwater, Plankton	MLKRVMRLDVRIACSDVEAHQELSGYALYESLLTYVAHMDLVGDPLQGTCHARASEILITKIHKILYVGYRRIFP*
Ga0114361_11195602	3300008265	Freshwater, Plankton	MRLDVLVACFYMHARRVVWRLDAKEHQELSGYDLYESLLTYAAHMDLVGDPLQDTCHARASKILITKIRKILYVGYRRI
Ga0114361_11222603	3300008265	Freshwater, Plankton	MLKRVMRLDVLDACFFMHALRVVSRLDAKEHQPLSGYALYESLLTCVAHLDLVGDPLQDTCQRTCPRFISKIRKIL
Ga0114361_11222831	3300008265	Freshwater, Plankton	RLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLPDTCHARVSKILITRIRKIRYVGYRRIFP*
Ga0114361_11228441	3300008265	Freshwater, Plankton	MRSGVHIACFYMHARRVVSRFDAEGHQELSGYGLYESLLTYVAHMDLIGDPLQDTCHARVSEILFTKIRKILYVGYRRIFP*
Ga0114361_11341241	3300008265	Freshwater, Plankton	MLKRVMRLDVLVACFYMHARRVVSRLDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTSHACASKILITKIRNILYVGYRRIFPKYVA*
Ga0114361_11717721	3300008265	Freshwater, Plankton	MLKRVMRLDVLVACFHMHARRVVSRFDAKADQELSGYDLCESLLTYVAHMDLVGDPLQDTCHARASKKLITRFCKILYVGYRRICP*
Ga0114361_11746701	3300008265	Freshwater, Plankton	MLKRVMRLDVLVACFYVHARRVVSRFDAKEHQELSGYDLYESLLTYVAYMDLVGDPLQDTYHARASKILITKIRRILYVGYRRIFP*
Ga0114361_11756991	3300008265	Freshwater, Plankton	MRSGVHVACFYMHARRVVLRFDAEGHQYLSGYDMYESLLTCVAHMDLVGDPLQDTCHARVSKILFTKICKI
Ga0114361_11807111	3300008265	Freshwater, Plankton	ARRVVSRFDAEGHQELSGYGLYESLLTYVAHMDLIGNPLQDTCHARVSKILFTKIRKILYVGYRRIFP*
Ga0114361_12564361	3300008265	Freshwater, Plankton	MLKRVMRLDVLVACFYMHARRVVSRLDAKEHQELSGYDLYESLLTNVAHMDLVGDPLQDTCHVRASKILITKIRKILYVGYRRIFPYYVA*
Ga0114361_12648241	3300008265	Freshwater, Plankton	MLKRVMRLDVLVACFYMHARRVVSRFDAKADQPLSGYDLYESLLTYIAHLDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP*
Ga0114361_12668051	3300008265	Freshwater, Plankton	MQSGVHVTCFYMHARRVVSRFDAKGHQELSGYDLYKSLLTCVAHMDLVGDPLQDTCHVRVSEILFTKIRKILYVGYRRIFP*
Ga0114361_12742871	3300008265	Freshwater, Plankton	MRLDVLVACFYMHAWHVVSRFDAKEHQELSGYDLYESLFTNIAHMGLVGDPLQDTCHARASKILITKIRKILYVGYRRIFP*
Ga0114357_11674931	3300008966	Freshwater, Plankton	MLKRVMRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITKIHKIFYLGIRRIFM*
Ga0102831_11822182	3300008996	Estuarine	MRLDVLVACFYMHARQVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP*
Ga0102810_12230141	3300009002	Estuarine	MRSGVHVACFYMHARRVVSRFDAEGHQELSGYGLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFLWYVA*
Ga0102811_13335081	3300009024	Estuarine	MLKRVMRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARVSKILFTKIRKILYVGYRRIFP*
Ga0102829_12018561	3300009026	Estuarine	MLKRVMRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFLWYVA*
Ga0102830_11151971	3300009059	Estuarine	MRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILY
Ga0105098_102738741	3300009081	Freshwater Sediment	VACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARVSKILITRIRKILYVGYRRIFP*
Ga0102812_103104511	3300009086	Estuarine	MRLDVLVACFYMHARRVVLRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP*
Ga0102812_106917321	3300009086	Estuarine	MRSGVHVACFYMHARRVVSRFDAEGHQELSGYGLYESLLTYVAHMDLVGDPLQDTCHARVSEILFTKIRKILYVGYRRIFP*
Ga0105097_101242221	3300009169	Freshwater Sediment	MLKRVMRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITKIRRILYVGYRRIFP*
Ga0119893_1004064	3300011910	Wastewater	MRSGVHVVCFYMHARRVVSRFDAKGHQELSGYELYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP*
Ga0180034_11406361	3300019207	Estuarine	FILKRVMRLDVFVVCFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP
Ga0180037_11875412	3300019214	Estuarine	MRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYHRIFP
Ga0208718_10930662	3300020565	Freshwater	MRSGVHVACFYMHARRVVSRFDAKGHQELSGYGLYESLLTYVAHMDLVGDPLQDTCHARVSEILFTKIRKILY
Ga0210299_1483751	3300021284	Estuarine	MRLDVLVACFYKHARRVVSRFDAKGHQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFLWYVA
Ga0210300_1318601	3300021296	Estuarine	MLKRVMRMDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILVTRIRKILYVGYRRIFP
Ga0210306_11475171	3300021312	Estuarine	MLKRVMRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP
Ga0210297_10198391	3300021845	Estuarine	VIRSDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGCRRIFQ
Ga0210304_10902592	3300021849	Estuarine	MLKRVMRLDVLVACFYMNARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP
Ga0208438_10831261	3300027196	Estuarine	MLERVMRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP
Ga0208163_10760531	3300027198	Estuarine	MRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARVSEILFTKIRKILYVGYRRIFP
Ga0208924_1169932	3300027204	Estuarine	MLKRVMRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARVSKILITRIRKILYVGYRRIFP
Ga0208169_10715351	3300027223	Estuarine	MRLDVLVACFYMHARRVVSRFDAKEHQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITKIRRILYVGYRRIFP
Ga0208177_10648561	3300027254	Estuarine	MRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP
Ga0208932_10690051	3300027256	Estuarine	MRSGVLVACFYMHARRVVSRFDAKGHQELSGYDLYESLLTCVAHMDLVGDPLQDTCHARVSKILFTKIRKILYVGYRRIFP
Ga0208923_10946921	3300027320	Estuarine	MLKRVMRLDVLVACFYMHARRVVSRFDAKADQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFLWYVA
Ga0209800_102619961	3300027800	Freshwater	MRLDVLVACFYMHAWRVVSRLDAEEHQPLSGYALYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP
Ga0209230_107220671	3300027836	Freshwater And Sediment	MRSGVHVACFYMHARRVVSRFDAKGHQELSGYGLYESLLTYVAHMDLVGDPLQDTCHARVSEILFTKIRKILYVGYRRIFP
Ga0335023_0445929_54_299	3300034050	Freshwater	MRSGVHVACFYMHARRVVSRFAARGHQELSGYGLYESLLTYVAHMDLVGDPLQDTCHARVSEILFTKIRKILYVGYRRIFP
Ga0335025_0535694_119_364	3300034096	Freshwater	MRSGVHVACFYMHARRVVSRFDAKGHQELSGYELYESLLTYVAHMDLVGDPLQDTCHARVSEILFTKIRKILYVGYRRIFP
Ga0335035_0679743_241_501	3300034105	Freshwater	MLKRVMRLDVLVACFYMHARRVVSRLDAKEHQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITKIRRILYVGYRRIFP
Ga0335037_0747173_116_361	3300034107	Freshwater	MRSGVHVACFYMHARRVVSRFDAEGHQELSGYGLYESLLTYVAHMDLVGDPLQDTCHARVSEILFTKIRKILYVGYRRIFP
Ga0335058_0059502_4_249	3300034121	Freshwater	MRSGVHVACFYMHARRVVSRSAARGHQELSGYGLYESLLTYVAHMDLVGDPLQDTCHARVSEILFTKIRKILYVGYRRIFP
Ga0335039_0675419_123_368	3300034355	Freshwater	MRLDVLVACFYMRARRVVSRFDAKAGQELSGYDLYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059945

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences