Metagenome / Metatranscriptome Family F085780

Basic Information
Family ID	F085780
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	62 residues
Representative Sequence	MGSKLKSLKILQVLPNGCVYFDNSVYLKTFTRYHFSKESLLSNFLDKKKLILTNSNFFYKKY
Number of Associated Samples	89
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	11.71 %
% of genes near scaffold ends (potentially truncated)	81.08 %
% of genes from short scaffolds (< 2000 bps)	76.58 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Most Common Taxonomy
Group	Unclassified (75.676 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (23.423 % of family members)
Environment Ontology (ENVO)	Unclassified (50.450 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (79.279 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.56% β-sheet: 6.67% Coil/Unstructured: 57.78%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00346	Complex1_49kDa	75.68
PF00329	Complex1_30kDa	8.11
PF13631	Cytochrom_B_N_2	4.50
PF10588	NADH-G_4Fe-4S_3	2.70
PF00507	Oxidored_q4	2.70
PF00033	Cytochrome_B	1.80
PF00032	Cytochrom_B_C	0.90
PF00384	Molybdopterin	0.90
PF03947	Ribosomal_L2_C	0.90
PF02790	COX2_TM	0.90
PF08388	GIIM	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0649	NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)	Energy production and conversion [C]	75.68
COG3261	Ni,Fe-hydrogenase III large subunit	Energy production and conversion [C]	75.68
COG0852	NADH:ubiquinone oxidoreductase 27 kD subunit (chain C)	Energy production and conversion [C]	8.11
COG3262	Ni,Fe-hydrogenase III component G	Energy production and conversion [C]	8.11
COG0838	NADH:ubiquinone oxidoreductase subunit 3 (chain A)	Energy production and conversion [C]	2.70
COG1290	Cytochrome b subunit of the bc complex	Energy production and conversion [C]	2.70
COG0090	Ribosomal protein L2	Translation, ribosomal structure and biogenesis [J]	0.90
COG1622	Heme/copper-type cytochrome/quinol oxidase, subunit 2	Energy production and conversion [C]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
All Organisms	root	All Organisms	24.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
cellular organisms	root	All Organisms → cellular organisms	24.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	19.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	5.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.60 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	5.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.60 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	5.41 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	1.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Hexapoda	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Insecta	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Dicondylia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Pterygota	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Endopterygota	cohort	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Diptera	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Brachycera	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Muscomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Eremoneura	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Cyclorrhapha	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Schizophora	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Acalyptratae	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Ephydroidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Drosophilidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Drosophilinae	subfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Drosophilini	tribe	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Drosophila	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Sophophora	subgenus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila → Sophophora	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
melanogaster group	species group	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila → Sophophora → melanogaster group	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
ananassae subgroup	species subgroup	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila → Sophophora → melanogaster group → ananassae subgroup	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
ananassae species complex	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila → Sophophora → melanogaster group → ananassae subgroup → ananassae species complex	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	5.41 %
Drosophila ananassae	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila → Sophophora → melanogaster group → ananassae subgroup → ananassae species complex → Drosophila ananassae	1.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000792\|BS_KBA_SWE02_21mDRAFT_10050790	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	1175	Open in IMG/M
3300002349\|B570J29580_100005	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	45395	Open in IMG/M
3300002835\|B570J40625_100047832	Not Available	6171	Open in IMG/M
3300002835\|B570J40625_101418319	Not Available	572	Open in IMG/M
3300003270\|JGI26113J46593_1026419	Not Available	635	Open in IMG/M
3300003549\|Ga0008452J51689_104658	Not Available	1322	Open in IMG/M
3300003553\|Ga0008454J51686_111656	Not Available	1263	Open in IMG/M
3300003554\|Ga0008451J51688_102867	Not Available	1391	Open in IMG/M
3300003555\|Ga0008453J51685_103434	Not Available	1393	Open in IMG/M
3300003566\|Ga0008455J51687_1006617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1374	Open in IMG/M
3300003682\|Ga0008456_1018427	Not Available	1434	Open in IMG/M
3300003683\|Ga0008459J53047_1017474	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300005527\|Ga0068876_10042196	Not Available	2808	Open in IMG/M
3300006357\|Ga0075502_1616756	Not Available	775	Open in IMG/M
3300006379\|Ga0075513_1356962	Not Available	1387	Open in IMG/M
3300006383\|Ga0075504_1407115	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila → Sophophora → melanogaster group → ananassae subgroup → ananassae species complex → Drosophila ananassae	1371	Open in IMG/M
3300006384\|Ga0075516_1371824	Not Available	1472	Open in IMG/M
3300006390\|Ga0075509_1474239	Not Available	834	Open in IMG/M
3300006390\|Ga0075509_1474454	Not Available	1361	Open in IMG/M
3300006393\|Ga0075517_1577968	Not Available	1426	Open in IMG/M
3300006394\|Ga0075492_1471741	Not Available	1216	Open in IMG/M
3300006396\|Ga0075493_1511027	Not Available	1031	Open in IMG/M
3300006397\|Ga0075488_1539385	All Organisms → cellular organisms → Eukaryota	1340	Open in IMG/M
3300006400\|Ga0075503_1539203	Not Available	558	Open in IMG/M
3300006484\|Ga0070744_10094169	All Organisms → cellular organisms → Eukaryota	867	Open in IMG/M
3300006571\|Ga0075505_1451441	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila → Sophophora → melanogaster group → ananassae subgroup → ananassae species complex → Drosophila ananassae	1564	Open in IMG/M
3300007321\|Ga0102692_1563895	Not Available	1130	Open in IMG/M
3300007692\|Ga0102823_1199948	Not Available	534	Open in IMG/M
3300008937\|Ga0103740_1013962	Not Available	885	Open in IMG/M
3300009054\|Ga0102826_1174259	Not Available	514	Open in IMG/M
3300009080\|Ga0102815_10021921	All Organisms → cellular organisms → Eukaryota	3553	Open in IMG/M
3300009543\|Ga0115099_10224952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2385	Open in IMG/M
3300009543\|Ga0115099_10469413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2862	Open in IMG/M
3300009543\|Ga0115099_10528296	Not Available	1379	Open in IMG/M
3300009543\|Ga0115099_10779443	Not Available	1422	Open in IMG/M
3300009592\|Ga0115101_1092419	All Organisms → cellular organisms → Eukaryota	5374	Open in IMG/M
3300009592\|Ga0115101_1679071	Not Available	1403	Open in IMG/M
3300009599\|Ga0115103_1124088	Not Available	1478	Open in IMG/M
3300009599\|Ga0115103_1222136	Not Available	1428	Open in IMG/M
3300009599\|Ga0115103_1795819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2058	Open in IMG/M
3300009606\|Ga0115102_10979882	Not Available	1331	Open in IMG/M
3300009728\|Ga0123371_168081	Not Available	1355	Open in IMG/M
3300010885\|Ga0133913_11448391	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	1743	Open in IMG/M
3300011381\|Ga0102688_1663096	Not Available	1415	Open in IMG/M
3300012408\|Ga0138265_1154145	Not Available	4862	Open in IMG/M
3300012408\|Ga0138265_1166536	Not Available	1390	Open in IMG/M
3300012408\|Ga0138265_1185965	Not Available	1398	Open in IMG/M
3300012412\|Ga0138266_1086502	Not Available	1391	Open in IMG/M
3300012412\|Ga0138266_1228649	Not Available	818	Open in IMG/M
3300012414\|Ga0138264_1234553	Not Available	2997	Open in IMG/M
3300012415\|Ga0138263_1023496	Not Available	6811	Open in IMG/M
3300012415\|Ga0138263_1172590	Not Available	1403	Open in IMG/M
3300012415\|Ga0138263_1819650	Not Available	1126	Open in IMG/M
3300012416\|Ga0138259_1426017	Not Available	1732	Open in IMG/M
3300012416\|Ga0138259_1473323	Not Available	1378	Open in IMG/M
3300012417\|Ga0138262_1435685	Not Available	1195	Open in IMG/M
3300012418\|Ga0138261_1681252	Not Available	1385	Open in IMG/M
3300012418\|Ga0138261_1841995	Not Available	1442	Open in IMG/M
3300012711\|Ga0157607_1169779	Not Available	790	Open in IMG/M
3300012734\|Ga0157615_1370007	Not Available	1329	Open in IMG/M
3300012935\|Ga0138257_1398732	Not Available	917	Open in IMG/M
3300012966\|Ga0129341_1152990	Not Available	1362	Open in IMG/M
3300012968\|Ga0129337_1147143	Not Available	1428	Open in IMG/M
3300018683\|Ga0192952_1001259	All Organisms → cellular organisms → Eukaryota	1395	Open in IMG/M
3300018930\|Ga0192955_10000794	Not Available	2876	Open in IMG/M
3300018980\|Ga0192961_10000099	Not Available	7720	Open in IMG/M
3300018982\|Ga0192947_10046843	Not Available	1334	Open in IMG/M
3300019000\|Ga0192953_10000861	Not Available	2320	Open in IMG/M
3300019001\|Ga0193034_10079503	Not Available	725	Open in IMG/M
3300019036\|Ga0192945_10034083	All Organisms → cellular organisms → Eukaryota	1361	Open in IMG/M
3300019198\|Ga0180033_173024	Not Available	901	Open in IMG/M
3300019200\|Ga0180036_1033611	Not Available	1257	Open in IMG/M
3300019201\|Ga0180032_1029394	Not Available	1360	Open in IMG/M
3300019201\|Ga0180032_1107457	Not Available	923	Open in IMG/M
3300019201\|Ga0180032_1109915	Not Available	1368	Open in IMG/M
3300019201\|Ga0180032_1170271	Not Available	1425	Open in IMG/M
3300019207\|Ga0180034_1015479	Not Available	1191	Open in IMG/M
3300019214\|Ga0180037_1231413	Not Available	1033	Open in IMG/M
3300019704\|Ga0193979_1037696	Not Available	582	Open in IMG/M
3300019726\|Ga0193974_1000116	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	4817	Open in IMG/M
3300019734\|Ga0193970_1007896	All Organisms → cellular organisms → Eukaryota	1108	Open in IMG/M
3300019737\|Ga0193973_1000021	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	10445	Open in IMG/M
3300019739\|Ga0194012_1060568	All Organisms → cellular organisms → Eukaryota	543	Open in IMG/M
3300019747\|Ga0193978_1005406	Not Available	1270	Open in IMG/M
3300020183\|Ga0194115_10004042	All Organisms → cellular organisms → Eukaryota	16081	Open in IMG/M
3300021108\|Ga0214162_1000085	All Organisms → cellular organisms → Eukaryota	20672	Open in IMG/M
3300021282\|Ga0210303_1013521	Not Available	1342	Open in IMG/M
3300021282\|Ga0210303_1119954	Not Available	638	Open in IMG/M
3300021284\|Ga0210299_102195	Not Available	2849	Open in IMG/M
3300021296\|Ga0210300_144589	Not Available	1334	Open in IMG/M
3300021323\|Ga0210295_1062351	Not Available	872	Open in IMG/M
3300021323\|Ga0210295_1167392	Not Available	946	Open in IMG/M
3300021323\|Ga0210295_1233437	Not Available	1370	Open in IMG/M
3300021373\|Ga0213865_10000113	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	51603	Open in IMG/M
3300021845\|Ga0210297_1003746	Not Available	1090	Open in IMG/M
3300021847\|Ga0210305_1135373	Not Available	828	Open in IMG/M
3300021849\|Ga0210304_1034765	Not Available	1327	Open in IMG/M
3300021957\|Ga0222717_10006672	Not Available	8241	Open in IMG/M
3300022374\|Ga0210311_1005803	Not Available	1472	Open in IMG/M
3300022375\|Ga0210313_1005434	Not Available	1430	Open in IMG/M
3300022375\|Ga0210313_1040259	Not Available	558	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10423690	All Organisms → cellular organisms → Eukaryota	597	Open in IMG/M
3300024546\|Ga0256356_1043784	Not Available	823	Open in IMG/M
3300027315\|Ga0208949_1059817	All Organisms → cellular organisms → Eukaryota	685	Open in IMG/M
3300027757\|Ga0208671_10000937	Not Available	13256	Open in IMG/M
3300027771\|Ga0209279_10000456	All Organisms → cellular organisms → Eukaryota	26925	Open in IMG/M
3300027806\|Ga0209985_10060969	Not Available	2055	Open in IMG/M
3300027833\|Ga0209092_10008309	All Organisms → cellular organisms → Eukaryota	7885	Open in IMG/M
3300028524\|Ga0210314_104149	Not Available	1186	Open in IMG/M
3300031857\|Ga0315909_10206481	Not Available	1551	Open in IMG/M
3300034280\|Ga0334997_0005792	Not Available	8669	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	23.42%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	16.22%
Polar Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine	13.51%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	12.61%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	6.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	5.41%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.60%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	3.60%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.70%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.80%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.80%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.90%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.90%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.90%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.90%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.90%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine	0.90%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.90%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.90%
Ice Edge, Mcmurdo Sound, Antarctica	Environmental → Aquatic → Marine → Oceanic → Unclassified → Ice Edge, Mcmurdo Sound, Antarctica	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000792	Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBA sample SWE 02_21m	Environmental	Open in IMG/M
3300002349	Freshwater microbial communities from Lake Mendota, WI - 20JUL2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003270	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_17_M020	Environmental	Open in IMG/M
3300003549	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_08_M0_20 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300003553	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_18_M0_10 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300003554	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_04_M0_20 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300003555	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_17_M020 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300003566	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_07_M0_10 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300003682	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_03_M0_10 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300003683	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_54_BLW_10 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300006357	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006379	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006383	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006384	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006390	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006393	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006394	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006396	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006397	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006400	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006571	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007321	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300007692	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743	Environmental	Open in IMG/M
3300008937	Eukaryotic and microbial communities from ice edge, McMurdo Sound, Antarctica - 3C	Environmental	Open in IMG/M
3300009054	Estuarine microbial communities from the Columbia River estuary - metaG S.737	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300009543	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009592	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009599	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009606	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009728	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_213_2m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011381	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel7S_1600h metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012408	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 192hr light incubation - RNA23.A_192.20151118 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012412	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 192hr light incubation - RNA24.B_192.20151118 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012414	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA16.ICE_1m.20151115 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012415	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA15.ICE_1m.20151115 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012416	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 24hr light incubation - RNA9.A_24.20151111 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012417	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 72hr light incubation - RNA13.B_72.20151113 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012418	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 72hr light incubation - RNA12.A_72.20151113 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012711	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES133 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012734	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES144 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012935	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA5.ICE_1m.20151110 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012966	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012968	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300018683	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001394 (ERX1782475-ERR1712204)	Environmental	Open in IMG/M
3300018930	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001396 (ERX1782254-ERR1712008)	Environmental	Open in IMG/M
3300018980	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_083 - TARA_N000001372 (ERX1782312-ERR1712127)	Environmental	Open in IMG/M
3300018982	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001384 (ERX1782271-ERR1711935)	Environmental	Open in IMG/M
3300019000	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001394 (ERX1782320-ERR1712129)	Environmental	Open in IMG/M
3300019001	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_009 - TARA_X000001043 (ERX1782383-ERR1712007)	Environmental	Open in IMG/M
3300019036	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001382 (ERX1782404-ERR1712086)	Environmental	Open in IMG/M
3300019198	Estuarine microbial communities from the Columbia River estuary - R8.48AS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019200	Estuarine microbial communities from the Columbia River estuary - R.1175 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019201	Estuarine microbial communities from the Columbia River estuary - R6.10AS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019207	Estuarine microbial communities from the Columbia River estuary - R.871 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019214	Estuarine microbial communities from the Columbia River estuary - R.1189 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019704	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLT_0-1_MG	Environmental	Open in IMG/M
3300019726	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_10-11_MG	Environmental	Open in IMG/M
3300019734	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_6-7_MG	Environmental	Open in IMG/M
3300019737	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_9-10_MG	Environmental	Open in IMG/M
3300019739	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLC_8-9_MG	Environmental	Open in IMG/M
3300019747	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRT_5-6_MG	Environmental	Open in IMG/M
3300020183	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surface	Environmental	Open in IMG/M
3300021108	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300021282	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1035 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021284	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R878 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021296	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R881 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021323	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R9.63AS (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300021845	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R876 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021847	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1070 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021849	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1037 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300022374	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1166 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022375	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1183 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023210 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MG	Environmental	Open in IMG/M
3300024546	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027315	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_03_M0_10 (SPAdes)	Environmental	Open in IMG/M
3300027757	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759 (SPAdes)	Environmental	Open in IMG/M
3300027771	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes)	Environmental	Open in IMG/M
3300027806	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG (SPAdes)	Environmental	Open in IMG/M
3300027833	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028524	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300034280	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085780

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BS_KBA_SWE02_21mDRAFT_100507901	3300000792	Marine	MGSKLKSLKILQVLPNGCVYFDNSVYLKTFTRYHFSKESLLSNFLDKKKLILTNSNFFYKKYRN*
B570J29580_1000056	3300002349	Freshwater	MRSKLKSLKVLQVLPNGCVYFDNLVYLKIFRRYHFSKESLLSNFLDKKKLLLINSNFFYKKYRN*
B570J40625_1000478329	3300002835	Freshwater	MSFKLKSLKILQVLPNGCVYFDNSVYLKTFIRYHFSKESLLSNFLDKKKLILTNSNFFYKKYRN*
B570J40625_1014183192	3300002835	Freshwater	MRSKLKSLKILQILPNGCVYFDNSVYLKTFIRYHFSKDSLLSNFLDKKNLILTNSNFFYKKYRT*
JGI26113J46593_10264192	3300003270	Marine	MRSKLKSLKIVQVLPNGCVHFDHLVYLKTYTRYNFSKKSLFFSLLDKKKLFFENSNFFYKKYRNQSVNNLINEFKTDYRKY*
Ga0008452J51689_1046582	3300003549	Seawater	MRSKLKSLKIVQVLPNGCVHFDHLVYLKTYTRYNFSKKSLFFSLLDKKKLFFENSNFFYKKYR
Ga0008454J51686_1116562	3300003553	Seawater	MRSKLKSLKIVQVLPNGCVHFDHLVYLKTYTRYNFSKKSLFFSLLDKKKLFFENSNFFYKKYRNQ
Ga0008451J51688_1028672	3300003554	Seawater	MRSKLKSLKIVQVLPNGCVHFDHLVYLKTYTRYNFSKKSLFFSLLDKKKLFFENSNFFYKKYRNQS
Ga0008453J51685_1034342	3300003555	Seawater	MRSKLKSLKIVQVLPNGCVHFDHLVYLKTYTRYNFSKKSLFFSLLDKKKLFFENSNFFYKKYRNQSV
Ga0008455J51687_10066173	3300003566	Seawater	MRSKLKSLKIVQVLPNGCVHFDHLVYLKTYTRYNFSKKSLFFSLLDKKKLFFENSNFFYKKY
Ga0008456_10184272	3300003682	Seawater	MHSKLKSFKILQILPNGCIYFDHSVYLKTYARYKFSKKSLFSNLLDKKKLISQNSNFFYKKYRNQNTNK*
Ga0008459J53047_10174742	3300003683	Seawater	MHSKLKSFKILQILPNGCIYFDHSVYLKTYARYKFSKKNLFSNLLDKKKLIS
Ga0068876_100421961	3300005527	Freshwater Lake	MGSKLKSLKILQVLPNGCVYFDNSVYLKTFTRYHFSKESL
Ga0075502_16167561	3300006357	Aqueous	MSLKLKSLKVLQISPNGSVYFDHSTYFKTYKKYNFLKKSFFFKLLNKKNLILTNSNFFYK
Ga0075513_13569622	3300006379	Aqueous	MGLKLKSFKVMQISSDGCIYFDYSMYLKTYKKYRFSKKNVFSNLLNKDELTLTNSNFFYK
Ga0075504_14071153	3300006383	Aqueous	MCAKLKSFKILQISPNGCVYFDYFAYLKTYKRYNFSKKSLYTNLSDKKETTLTTSTFFYKKY
Ga0075516_13718242	3300006384	Aqueous	MGLKLKSFKVMQISSDGCIYFDYSMYLKTYKKYRFSKKNVFSNLLNKDELTLTNSNFFYKINKTKAW*
Ga0075509_14742392	3300006390	Aqueous	MSLKLKSLKVLQISPNGSVYFDHSTYFKTYKKYNFLKKSFFFKLLNKKNLILTNSNFFYKKYR
Ga0075509_14744542	3300006390	Aqueous	MGLKLKSFKVMQISSDGCIYFDYSMYLKTYKKYRFSKKNVFSNLLNKDELTLTNSNFFYKKYR
Ga0075517_15779682	3300006393	Aqueous	MGLKLKSFKVMQISSDGCIYFDYSMYLKTYKKYRFSKKNVFSNLLNKDELTLTNSNFFYKKY
Ga0075492_14717412	3300006394	Aqueous	MRFKLKSFKILQILPNGCVFFDHAAYLKTHTRYNFSKKSLFSSVLGKKKLISENSNFF
Ga0075493_15110273	3300006396	Aqueous	MRFKLKSFKILQILPNGCVFFDHAAYLKTHTRYNFSKKSLFSSVLGKKKLISENSNFFYR
Ga0075488_15393851	3300006397	Aqueous	VRSKLKSFKILQIFPNGSVYFDYLAYLKMYKRHYFAKKSFFSNLLNKKKSFLTNSTFFYK
Ga0075503_15392032	3300006400	Aqueous	MCAKLKSFKILQISPNGCVYFDYFAYLKTYKRYNFSKKSLYTNLSDKKETTLTTSTFFYK
Ga0070744_100941691	3300006484	Estuarine	KLKSLKILQVLPNGCVYFDNSVYLKTFIRYHFSKESLLSNFLDKKKLILTNSNFFYKKYRN*
Ga0075505_14514411	3300006571	Aqueous	MCAKLKSFKILQISPNGCVYFDYFAYLKTYKRYNFSKKSLYTNLSDKKETTLTTSTFFYKKYR
Ga0102692_15638951	3300007321	Freshwater Lake	MGSKLKSLKILQVLPNGCVYFDNSVYLKTFTRYHFSKESLLSNFLDKKKLILTNSNFFYK
Ga0102823_11999481	3300007692	Estuarine	MRPKLKTLKTLQILPNGCVYFDNSVYLKTFIRYHFSKDSLLSNFSDKKNLILTN
Ga0103740_10139621	3300008937	Ice Edge, Mcmurdo Sound, Antarctica	MRSKLKSLKILNICPNGSVYFNYSAYLKTYKRYNFSKESFFSNLLNKKKLISTNSNFFYKKYHSQT
Ga0102826_11742591	3300009054	Estuarine	MCFKLKSLKGLQISPNGCIYFDHLIYFKTYKKYNFSKKSLLSKLLHKKKLTSTSSNFFYKKYR
Ga0102815_100219211	3300009080	Estuarine	MGSKLKSLKILQVLPNGCVYFDNSVYLKTFTRYHFSKESLLSNFLDKKKLILTNSNFF
Ga0115099_102249524	3300009543	Marine	MRAKLKSLKNLQIFPNGCVYFDYSVYVKTYKKYNLSKKSLFFKLLDRKTLLSTNSNFFYKKYRN*
Ga0115099_104694136	3300009543	Marine	MCSKLKSLKTLQISSNGCVFFDHSIYLKTYKRYNFSKKSLLFSPLNKEELTLTNSNFFYKKYRN
Ga0115099_105282963	3300009543	Marine	MRYNLKSLKTLHIFPNGSVYFDYSSYLKTYKKYNFSKESFFYDLLNKKKLTSSNSNLFYK
Ga0115099_107794431	3300009543	Marine	VCSKLKTFKILQIFPNGSVYFDYSAYLKTYKRHYFSKKSFFSNLLNEKKTFLTNS
Ga0115101_10924198	3300009592	Marine	MYSCLKSLKSLQISANGCVCFDHLAYLKMYKRYNFSKKSFFFTPLNKKEFTLNNSNFFYK
Ga0115101_16790713	3300009592	Marine	VCSKLKTFKILQIFPNGSVYFDYSAYLKTYKRHYFSKKSFFSNLLNEKKTFLTNSTFFYKKYCNKIIKNL
Ga0115103_11240881	3300009599	Marine	MRSKLKSLKIVQVLPNGCVHFDHLVYLKTYTRYNFSKKSLFFSLLDKKKLFFENSNFFYKKYRNQSVNNLINEFKTDYRK
Ga0115103_12221361	3300009599	Marine	MRYNLKSLKTLHIFPNGSVYFNYSFYLKTYKKYNFSKESFFYDLLNKKKLTSSNSNFFYKKYR
Ga0115103_17958193	3300009599	Marine	MRYNLKSLKTLHIFPNGSVYFDYSSYLKTYKKYNFSKESFFYDLLNKKKLTSSNSNLFYKKYRNQIVKN*
Ga0115102_109798824	3300009606	Marine	MVHSKLKSLKILQIFPNGSVCLDYSAYLKTYKRYNFSKEGFFSNVLNKKKLTLTHSNFFYKKY
Ga0123371_1680814	3300009728	Marine	MCSKLKSLKIVQILPNGCIYFDYSVFLKTYVKYNFSKKSLFSSALNKKKFAS
Ga0133913_114483911	3300010885	Freshwater Lake	GSNLKSLKILHILPNGCVYFDNLTYLKTFVRYNFSKKSLLSNILDKKKIILTNSNFFYKKYRN*
Ga0102688_16630961	3300011381	Freshwater Lake	MRFKLKSLRILQILPNGCVYFDNSVYLKTFIRYNFSKKSLLSNFLDKKKL
Ga0138265_11541451	3300012408	Polar Marine	MCSKLKTLKILHIFPNGCVYFNYSAYLKTYKRYNFSKESFFSNLLNKKKVTSGNSNFFYKKY
Ga0138265_11665363	3300012408	Polar Marine	MRSKLKSLKILQVLPNGCVHFDHLVYLKTYTRYNFSKKSLFFSLLDKKKLFFENSNFFYKKYRNQSV
Ga0138265_11859653	3300012408	Polar Marine	VRFKLKSLKILQIFPNGSVYFDYLAYLKTYKKYNFSKKSFFSNLLNKKKLILANSNFFYK
Ga0138266_10865023	3300012412	Polar Marine	MRSKLKSLKILQVLPNGCVHFDHLVYLKTYTRYNFSKKSLFFSLLDKKKLFFENSNFFYKKYRNQ
Ga0138266_12286491	3300012412	Polar Marine	VYSKLKSLKIVHIFPNGSVYFDYSAYLKMYKRYNFSKESFYYNLLSKKKLMLSNSNFFYK
Ga0138264_12345531	3300012414	Polar Marine	VRFKLKSLKILQIFPNGSVYFDYLAYLKTYKKYNFSKKSFFSNLLNKKKLILANSNFFYKKYCTQ
Ga0138263_10234965	3300012415	Polar Marine	MRSKLKSLKILQVLPNGCVHFDHLVYLKTYTRYNFSKKSLFFSLLDKKKLFFENSNFFYKKYRNQSVNNLINEFKTDYRKY*
Ga0138263_11725904	3300012415	Polar Marine	VRLIDNFIIVYSKLKSLKIVHIFPNGSVYFDYSAYLKMYKRYNFSKESFYYNLLSKKKLMLSNSNFFYKKY
Ga0138263_18196501	3300012415	Polar Marine	VRFKLKSLKILQIFPNGSVYFDYLAYLKTYKKYNFSKKSFFSNLLNKKKLILANSNFFYKKYCT
Ga0138259_14260174	3300012416	Polar Marine	VRFKLKSLKILQIFPNGSVYFDYLAYLKTYKKYNFSKKSFFSNLLNKKKLILANSNFFYKKYC
Ga0138259_14733231	3300012416	Polar Marine	MRSKLKSLKILNICPNGSVYFNYSAYLKTYKRYNFSKESFFSNLLNKKKLISTNSNFFYKKYR
Ga0138262_14356851	3300012417	Polar Marine	VRFKLKSFKVLQIFPNGSVYFDYLAYLKTYKKYNFSKKSFYSNLLNKKKLILVNSNFFYKKYC
Ga0138261_16812521	3300012418	Polar Marine	MRSKLKSLKILQVLPNGCVHFDHLVYLKTYTRYNFSKKSLFFSLLDKKKLFF
Ga0138261_18419954	3300012418	Polar Marine	MCSKLKTLKILHIFPNGCVYFNYSAYLKTYKRYNFSKESFFSNLLNKKKVTSGNSNFFYKKYRN
Ga0157607_11697791	3300012711	Freshwater	MRSKLKSLKVLQVLPNGCVYFDNLVYLKIFRRYHFSKESLLSNFLDKKKLLLINS
Ga0157615_13700071	3300012734	Freshwater	MRSKLKSLKVLQVLPNGCVYFDNLVYLKIFRRYHFSKESLLSNFLDKKKLLLINSNFFYKKY
Ga0138257_13987321	3300012935	Polar Marine	VRFKLKSLKILQIFPNGSVYFDYLAYLKTYKKYNFSKKSFFSNLLNKKKLILANSNFF
Ga0129341_11529903	3300012966	Aqueous	MRYNLKSLKILHIFPNGSVYFDYSFYLKTYRKYNFSKESFFYDLLDKKKLISSNSN
Ga0129337_11471431	3300012968	Aqueous	MSFKLKSLKILQISPNGSVYFDHSIYFKTYKKYNFSKKSFLFKLLNKKNFTLMNSNFFYK
Ga0192952_10012591	3300018683	Marine	VRFKLKSFKVLQIFPNGSVYFDYLAYLKTYKKYNFSKKSFYSNLLNKKKLILVNSNFFY
Ga0192955_100007941	3300018930	Marine	VRFKLKSFKVLQIFPNGSVYFDYLAYLKTYKKYNFSKKSFYSNLLNKKKLILVNSNFFYKKYCT
Ga0192961_100000994	3300018980	Marine	MRSKLKSFKILQIFPNGSVYFDSLAYLKMYKRHYFXKKSFFSNLLNKKKSFLINSTFFYKKYCNKTVKTL
Ga0192947_100468431	3300018982	Marine	MCSKLKTLKILHIFPNGCVYFNYSAYLKTYKRYNFSKESFFSNLLNKKKVTSGNSNFFYKKYRNQ
Ga0192953_100008611	3300019000	Marine	VRFKLKSFKVLQIFPNGSVYFDYLAYLKTYKKYNFSKKSFYSNLLNKKKLILVNSNFFYKKYCTQ
Ga0193034_100795031	3300019001	Marine	MHSKLKSFKILQILPNGCIYFDHSVYLKTYARYKFSKKSLFSNLLDKKKLISQ
Ga0192945_100340831	3300019036	Marine	VRFKLKSFKVLQIFPNGSVYFDYLAYLKTYKKYNFSKKSFYSNLLNKKKLILVNSNFFYKKYCTQKKK
Ga0180033_1730241	3300019198	Estuarine	VSQLKSFKNLQISWNGCVYFDNSVYLKTYKRYKFLNKNLFSNLLNKKPFNSTNSNFFYKKYRN
Ga0180036_10336111	3300019200	Estuarine	MGSKLKSLKILQVLPNGCVYFDNSVYLKTFTRYHFSKESLLSNFLDKKKLI
Ga0180032_10293942	3300019201	Estuarine	MRSKLKSLKILQILPNGCVYFDNSVYLKTFIRYHFSKNSLLSNFLSKKNLMLMNSNFFYKKYR
Ga0180032_11074571	3300019201	Estuarine	MSFKLKSLKILQVLPNGCVYFDNSVYLKTFIRYHFSKESLLSNFLDKKKL
Ga0180032_11099151	3300019201	Estuarine	MRPKLKTLKTLQILPNGCVYFDNSVYLKTFIRYHFSKNSLLSNFLSKKNLMLMNSNFFYKKYR
Ga0180032_11702712	3300019201	Estuarine	MGSKLKSLKILQVLPNGCVYFDNSVYLKTFTRYHFSKESLLSNFLDKKKLILTNSNFFYKKY
Ga0180034_10154793	3300019207	Estuarine	MRSKLKSLKVLQVLPNGCVYFDNLVYLKIFRRYHFSKESLLSNFLDKKKLILTN
Ga0180037_12314132	3300019214	Estuarine	MVHSKLKSLKILQIFPNGSVCLDYSAYLKTYKRYNFSKEGFFSNVLNKKKLTLTHSNFFYKKYRN
Ga0193979_10376962	3300019704	Sediment	MRFKLKSFKILQILPNGCVFFDHAAYLKTHTRYNFSKKSLFSSVLGKKKLISENSNFFY
Ga0193974_10001161	3300019726	Sediment	NGCVYFDNLVYLKTYTRYKFSKKSLFFSLLDKKKLIFENSNFFYKKYRNQSVNNSINEFKIDYRKY
Ga0193970_10078961	3300019734	Sediment	ILQILPNGCVFFDHAAYLKTHTRYNFSKKSLFSSVLGKKKLISENSNFFYRKYRN
Ga0193973_100002117	3300019737	Sediment	MRFKLKSFKILQILPNGCVFFDHAAYLKTHTRYNFSKKSLFSSVLGKKKLISENSNFFYRKYRN
Ga0194012_10605681	3300019739	Sediment	RSKLKSLKILQVLPNGCVYFDNLVYLKTYTRYKFSKKSLFFSLLDKKKLIFENSNFFYKKYRNQSVNNSINEFKIDYRKY
Ga0193978_10054062	3300019747	Sediment	MRSKLKSLKILQVLPNGCVYFDNLVYLKTYTRYKFSKKSLFFSLLDKKKLIFENSNFFYKKYRNQSVNNSINEFNIDYRKY
Ga0194115_1000404213	3300020183	Freshwater Lake	MRSKLKSFKILQILPNGCVYFDNSVYLKTFTRYHFSKDSLLSTFLDKKTLIVTNSNFFYKKYRT
Ga0214162_100008510	3300021108	Freshwater	MSFKLKSLKILQVLPNGCVYFDNSVYLKTFIRYHFSKESLLSNFLDKKKLILTNSNFFYKKYRN
Ga0210303_10135212	3300021282	Estuarine	MRSKLKSLRILQILPNGCVYFDNSVYLKTFIRYNFSKKSLLSNFLDKKKLIL
Ga0210303_11199541	3300021282	Estuarine	MSSKLKSLKILQVLPNGCVYFDNSVYLKTFIRYHFSKESLLSNFLDKKKLILTNSNFFYKKYRN
Ga0210299_1021951	3300021284	Estuarine	MRFKLKSLKILQILPNGCIYFDSSVYLKTFIRYHFSKESLFSNFLDKKKLILTNSNFFYKKYRN
Ga0210300_1445891	3300021296	Estuarine	MRSKLKSLRILQILPNGCVYFDNSVYLKTFIRYNFSKKSLLSNFLDKKKLI
Ga0210295_10623511	3300021323	Estuarine	MRSKLKSLKILQILPNGCVYFDNSVYLKTFIRYHFSKNSLLSNFLSKKNLMLMNSNFFYKKYRT
Ga0210295_11673921	3300021323	Estuarine	MRPKLKTLKTLQILPNGCVYFDNSVYLKTFIRYHFSKDSLLSNF
Ga0210295_12334371	3300021323	Estuarine	MRSKLKSLKILQILPNGCVYFDNSVYLKTFIRYHFSKDSLLSNFLDKKNLILTNSNFFYKKYRT
Ga0213865_1000011378	3300021373	Seawater	MHSKLKSFKILQILPNGCIYFDHSVYLKTYARYKFSKKSLFSNLLDKKKLISQNSNFFYKKYRNQNTNK
Ga0210297_10037462	3300021845	Estuarine	MSSKLKSLKILQVLPNGCVYFDNSVYLKTFIRYHFSKESLLSNFLDKKKLILTNSNFFYK
Ga0210305_11353731	3300021847	Estuarine	MSFKLKSLKILQVLPNGCVYFDNSVYLKTFIRYHFSKESLLSNFLDKKKLI
Ga0210304_10347652	3300021849	Estuarine	MRSKLKSLRILQILPNGCVYFDNSVYLKTFIRYNFSKKSLLSNFLDKKKL
Ga0222717_100066728	3300021957	Estuarine Water	MRSKLKSLKIVQVLPNGCVHFDHLVYLKTYTRYNFSKKSLFFSLLDKKKLFFENSNFFYKKYRNQSVNNLINEFKTDYRKY
Ga0210311_10058031	3300022374	Estuarine	MCFKLKSLKGLQISPNGCIYFDHLIYFKTYKKYNFSKKSLLSKLLHKKKLTSTSSNFFYKKY
Ga0210313_10054342	3300022375	Estuarine	MRPKLKTLKTLQILPNGCVYFDNSVYLKTFIRYHFSKDSLLSNFSDKKNLILTNSNFFYKKYR
Ga0210313_10402592	3300022375	Estuarine	MRLKLKSLKILQILPNGCVFFDHAAYLKTHTRYNFSKKSLFSSVLGKKKLISENSNFFYRKYR
(restricted) Ga0233412_104236902	3300023210	Seawater	IVQVLPNGCVHFDHLVYLKTYTRYNFSKKSLFFSLLDKKKLFFENSNFFYKKYRNQSVNNLINEFKTDYRKY
Ga0256356_10437842	3300024546	Freshwater	MRPKLKTLKTLQILPNGCVYFDNSVYLKTFIRYHFSKDSLLSNFSDKKNLILTNSNFFYKKYRT
Ga0208949_10598171	3300027315	Marine	VILMRSKLKSLKIVQVLPNGCVHFDHLVYLKTYTRYNFSKKSLFFSLLDKKKLFFENSNFFYKKYRNQSVNNLINEFKTDYRKY
Ga0208671_1000093715	3300027757	Estuarine	MCFKLKSLKGLQISPNGCIYFDHLIYFKTYKKYNFSKKSLLSKLLHKKKLTSTSSN
Ga0209279_1000045631	3300027771	Marine	VRFKLKSLKILQIFPNGSVYFDYLAYLKTYKKYNFSKKSFFSNLLNKKKLILANSNFFYKKYCTQIIKK
Ga0209985_100609691	3300027806	Freshwater Lake	MSFKLKSLKILQVLPNGCVYFDNSVYLKTFIRYHFSKESLLS
Ga0209092_1000830914	3300027833	Marine	MNAKLKSFKFLQIFPNGCVYFDHLAYLKSYKKYNFSKKSLFSKLLNKKKGLLTNSNFFYRKYRN
Ga0210314_1041491	3300028524	Estuarine	MRSKLKSLKVLQVLPNGCVYFDNLVYLKIFRRYHFSKESLLSNFLDKKKLLLINSNFFYKKYR
Ga0315909_102064813	3300031857	Freshwater	MGSKLKSLKILQVLPNGCVYFDNSVYLKTFTRYHFSKESLLSNFLDKKKLILTNSNFFYKKYRN
Ga0334997_0005792_4607_4801	3300034280	Freshwater	MRSKLKSLKILQILPNGCVYFDNSVYLKTFIRYHFSKNSLLSNFLDKKNLMLMNSNFFYKKYRT

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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