Metagenome / Metatranscriptome Family F084703

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084703
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	44 residues
Representative Sequence	AVEVLPSSLPRELFSTTAPRFLPDKLEPLGFSLSGQLRVAS
Number of Associated Samples	86
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.79 %
% of genes near scaffold ends (potentially truncated)	97.32 %
% of genes from short scaffolds (< 2000 bps)	81.25 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (73.214 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (35.714 % of family members)
Environment Ontology (ENVO)	Unclassified (84.821 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (75.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.16
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.16
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF03054	tRNA_Me_trans	77.68
PF00459	Inositol_P	8.93
PF12073	DUF3553	5.36
PF00216	Bac_DNA_binding	1.79
PF01323	DSBA	1.79
PF02631	RecX	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	77.68
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	1.79
COG2137	SOS response regulatory protein OraA/RecX, interacts with RecA	Posttranslational modification, protein turnover, chaperones [O]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.21 %
All Organisms	root	All Organisms	26.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.21 %
cellular organisms	root	All Organisms → cellular organisms	26.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.21 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.21 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.21 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	10.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.21 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	10.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.21 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	10.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.21 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	3.57 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000152\|LPjun08P12500mDRAFT_c1055856	Not Available	536	Open in IMG/M
3300000179\|LPjun09P16500mDRAFT_c1006248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2342	Open in IMG/M
3300000222\|LPjun09P12500mDRAFT_1006920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2688	Open in IMG/M
3300000222\|LPjun09P12500mDRAFT_1014210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1701	Open in IMG/M
3300000971\|JGI12060J13090_102645	Not Available	1028	Open in IMG/M
3300001126\|JGI12156J13080_102544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1153	Open in IMG/M
3300001459\|MCRcombined_1448363	Not Available	554	Open in IMG/M
3300001676\|TuiMalila_1026451	Not Available	1328	Open in IMG/M
3300001678\|Mariner_1001638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	12078	Open in IMG/M
3300001679\|TahiMoana_1033441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1684	Open in IMG/M
3300001680\|KiloMoana_10032841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2322	Open in IMG/M
3300001680\|KiloMoana_10059489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2176	Open in IMG/M
3300001769\|supr60_1011074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1866	Open in IMG/M
3300001783\|Vondamm_10037113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1579	Open in IMG/M
3300005398\|Ga0066858_10137520	Not Available	708	Open in IMG/M
3300005399\|Ga0066860_10069166	Not Available	1286	Open in IMG/M
3300005399\|Ga0066860_10225490	Not Available	632	Open in IMG/M
3300005408\|Ga0066848_10011052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2660	Open in IMG/M
3300005425\|Ga0066859_10167628	Not Available	651	Open in IMG/M
3300005429\|Ga0066846_10051993	Not Available	1461	Open in IMG/M
3300005430\|Ga0066849_10257933	Not Available	671	Open in IMG/M
3300005592\|Ga0066838_10209496	Not Available	544	Open in IMG/M
3300005605\|Ga0066850_10014400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3450	Open in IMG/M
3300005948\|Ga0066380_10279724	Not Available	511	Open in IMG/M
3300005953\|Ga0066383_10017174	All Organisms → cellular organisms → Bacteria → Proteobacteria	2458	Open in IMG/M
3300005953\|Ga0066383_10132917	Not Available	743	Open in IMG/M
3300006002\|Ga0066368_10016583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2594	Open in IMG/M
3300006012\|Ga0066374_10086185	Not Available	897	Open in IMG/M
3300006012\|Ga0066374_10122929	Not Available	750	Open in IMG/M
3300006013\|Ga0066382_10021693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2303	Open in IMG/M
3300006013\|Ga0066382_10035765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1778	Open in IMG/M
3300006019\|Ga0066375_10035726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1725	Open in IMG/M
3300006166\|Ga0066836_10930015	Not Available	524	Open in IMG/M
3300006308\|Ga0068470_1153219	Not Available	1172	Open in IMG/M
3300006330\|Ga0068483_1595383	Not Available	543	Open in IMG/M
3300006341\|Ga0068493_10342441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1664	Open in IMG/M
3300006736\|Ga0098033_1142890	Not Available	672	Open in IMG/M
3300006793\|Ga0098055_1158776	Not Available	868	Open in IMG/M
3300006902\|Ga0066372_10068064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1775	Open in IMG/M
3300006902\|Ga0066372_10108632	Not Available	1441	Open in IMG/M
3300006902\|Ga0066372_10307276	Not Available	898	Open in IMG/M
3300006902\|Ga0066372_10361051	Not Available	832	Open in IMG/M
3300006902\|Ga0066372_10724583	Not Available	599	Open in IMG/M
3300007291\|Ga0066367_1014598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2586	Open in IMG/M
3300007291\|Ga0066367_1339352	Not Available	595	Open in IMG/M
3300007770\|Ga0105015_1146123	Not Available	762	Open in IMG/M
3300009104\|Ga0117902_1479365	Not Available	1065	Open in IMG/M
3300009409\|Ga0114993_10563431	Not Available	841	Open in IMG/M
3300009481\|Ga0114932_10376385	Not Available	844	Open in IMG/M
3300009593\|Ga0115011_11937708	Not Available	536	Open in IMG/M
3300010883\|Ga0133547_11426884	Not Available	1305	Open in IMG/M
3300020254\|Ga0211669_1038678	Not Available	669	Open in IMG/M
3300020389\|Ga0211680_10109812	Not Available	1136	Open in IMG/M
3300020415\|Ga0211553_10092769	Not Available	1259	Open in IMG/M
3300020419\|Ga0211512_10400726	Not Available	618	Open in IMG/M
3300020425\|Ga0211549_10009647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3527	Open in IMG/M
3300020425\|Ga0211549_10096586	Not Available	1133	Open in IMG/M
3300020425\|Ga0211549_10190820	Not Available	811	Open in IMG/M
3300020425\|Ga0211549_10262907	Not Available	693	Open in IMG/M
3300020426\|Ga0211536_10191946	Not Available	796	Open in IMG/M
3300020434\|Ga0211670_10349114	Not Available	618	Open in IMG/M
3300020435\|Ga0211639_10219121	Not Available	788	Open in IMG/M
3300020443\|Ga0211544_10022466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2542	Open in IMG/M
3300020444\|Ga0211578_10021247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2508	Open in IMG/M
3300020444\|Ga0211578_10051468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1565	Open in IMG/M
3300020458\|Ga0211697_10028889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2362	Open in IMG/M
3300020466\|Ga0211714_10600964	Not Available	514	Open in IMG/M
3300020472\|Ga0211579_10064539	Not Available	2242	Open in IMG/M
3300020472\|Ga0211579_10192140	Not Available	1189	Open in IMG/M
3300021089\|Ga0206679_10027235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3611	Open in IMG/M
3300021345\|Ga0206688_10675698	Not Available	544	Open in IMG/M
3300021352\|Ga0206680_10384391	Not Available	545	Open in IMG/M
3300021443\|Ga0206681_10431930	Not Available	507	Open in IMG/M
3300021791\|Ga0226832_10237498	Not Available	725	Open in IMG/M
3300022225\|Ga0187833_10027101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	4336	Open in IMG/M
3300025199\|Ga0208331_122571	Not Available	568	Open in IMG/M
3300025204\|Ga0208063_1015735	Not Available	1243	Open in IMG/M
3300025221\|Ga0208336_1000557	Not Available	14451	Open in IMG/M
3300025265\|Ga0208467_1049502	Not Available	642	Open in IMG/M
3300025863\|Ga0208833_1063481	Not Available	584	Open in IMG/M
3300026087\|Ga0208113_1033360	Not Available	1461	Open in IMG/M
3300026119\|Ga0207966_1017281	Not Available	2281	Open in IMG/M
3300026119\|Ga0207966_1029268	Not Available	1586	Open in IMG/M
3300026207\|Ga0208895_1121670	Not Available	694	Open in IMG/M
3300026207\|Ga0208895_1124964	Not Available	683	Open in IMG/M
3300026208\|Ga0208640_1027003	Not Available	1536	Open in IMG/M
3300026268\|Ga0208641_1067378	Not Available	1065	Open in IMG/M
3300026269\|Ga0208766_1010034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3941	Open in IMG/M
3300027630\|Ga0209432_1125780	Not Available	744	Open in IMG/M
3300028190\|Ga0257108_1037306	Not Available	1466	Open in IMG/M
3300028488\|Ga0257113_1159648	Not Available	675	Open in IMG/M
3300028489\|Ga0257112_10046379	Not Available	1617	Open in IMG/M
3300028489\|Ga0257112_10113578	Not Available	979	Open in IMG/M
3300028489\|Ga0257112_10137486	Not Available	875	Open in IMG/M
3300028535\|Ga0257111_1055454	Not Available	1301	Open in IMG/M
3300031757\|Ga0315328_10322582	Not Available	901	Open in IMG/M
3300031757\|Ga0315328_10705576	Not Available	570	Open in IMG/M
3300031773\|Ga0315332_10908874	Not Available	528	Open in IMG/M
3300031800\|Ga0310122_10225054	Not Available	857	Open in IMG/M
3300031800\|Ga0310122_10272331	Not Available	755	Open in IMG/M
3300031801\|Ga0310121_10600928	Not Available	596	Open in IMG/M
3300031802\|Ga0310123_10485123	Not Available	781	Open in IMG/M
3300031803\|Ga0310120_10638272	Not Available	519	Open in IMG/M
3300031804\|Ga0310124_10118194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1643	Open in IMG/M
3300031886\|Ga0315318_10277898	Not Available	960	Open in IMG/M
3300032032\|Ga0315327_10863940	Not Available	546	Open in IMG/M
3300032278\|Ga0310345_12016041	Not Available	561	Open in IMG/M
3300032278\|Ga0310345_12453998	Not Available	503	Open in IMG/M
3300032360\|Ga0315334_10163940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1776	Open in IMG/M
3300032360\|Ga0315334_10704658	Not Available	873	Open in IMG/M
3300032360\|Ga0315334_11750986	Not Available	528	Open in IMG/M
3300032360\|Ga0315334_11904396	Not Available	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	62.50%
Unclassified	Environmental → Aquatic → Marine → Unclassified	16.07%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	10.71%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	8.04%
Coastal	Environmental → Aquatic → Marine → Coastal	1.79%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	56.25%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	16.07%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	10.71%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	5.36%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	4.46%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.79%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.89%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.89%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	35.71%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	16.07%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	10.71%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	10.71%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	6.25%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	5.36%
Black Smokers Hydrothermal Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume	4.46%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	2.68%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	2.68%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.79%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.89%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.89%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.89%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000152	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P12 500m	Environmental	Open in IMG/M
3300000179	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P16 500m	Environmental	Open in IMG/M
3300000222	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P12 500m	Environmental	Open in IMG/M
3300000971	Marine microbial communities from the Deep Pacific Ocean - MP2052	Environmental	Open in IMG/M
3300001126	Marine microbial communities from the Deep Atlantic Ocean - MP0440	Environmental	Open in IMG/M
3300001459	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - All Sites - lt1k	Environmental	Open in IMG/M
3300001676	Black smokers hydrothermal plume microbial communities from Tui Malila, Lau Basin, Pacific Ocean	Environmental	Open in IMG/M
3300001678	Black smokers hydrothermal plume microbial communities from Mariner, Lau Basin, Pacific Ocean -IDBA	Environmental	Open in IMG/M
3300001679	Black smokers hydrothermal plume microbial communities from Tahi Moana, Lau Basin, Pacific Ocean	Environmental	Open in IMG/M
3300001680	Black smokers hydrothermal plume microbial communities from Kilo Moana, Pacific Ocean	Environmental	Open in IMG/M
3300001769	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Shallow Background Supr60	Environmental	Open in IMG/M
3300001783	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Vondamm Sites	Environmental	Open in IMG/M
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005399	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F14-07SV275	Environmental	Open in IMG/M
3300005408	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72	Environmental	Open in IMG/M
3300005425	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199	Environmental	Open in IMG/M
3300005429	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV76	Environmental	Open in IMG/M
3300005430	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69	Environmental	Open in IMG/M
3300005592	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89	Environmental	Open in IMG/M
3300005605	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67	Environmental	Open in IMG/M
3300005948	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_O2min_ad_571m_LV	Environmental	Open in IMG/M
3300005953	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_Bottom_ad_3770_LV_A	Environmental	Open in IMG/M
3300006002	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A	Environmental	Open in IMG/M
3300006012	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_AAIW_ad_750m_LV_A	Environmental	Open in IMG/M
3300006013	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B	Environmental	Open in IMG/M
3300006019	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_NADW_ad_2500m_LV_A	Environmental	Open in IMG/M
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006330	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_1000m	Environmental	Open in IMG/M
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300007291	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_A	Environmental	Open in IMG/M
3300007770	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300009104	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300020254	Marine microbial communities from Tara Oceans - TARA_B100001013 (ERX555924-ERR599085)	Environmental	Open in IMG/M
3300020389	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX556139-ERR599008)	Environmental	Open in IMG/M
3300020415	Marine microbial communities from Tara Oceans - TARA_B100001146 (ERX555973-ERR599166)	Environmental	Open in IMG/M
3300020419	Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955)	Environmental	Open in IMG/M
3300020425	Marine microbial communities from Tara Oceans - TARA_B100001765 (ERX556083-ERR598964)	Environmental	Open in IMG/M
3300020426	Marine microbial communities from Tara Oceans - TARA_B100000378 (ERX555992-ERR599112)	Environmental	Open in IMG/M
3300020434	Marine microbial communities from Tara Oceans - TARA_B100001013 (ERX555944-ERR599071)	Environmental	Open in IMG/M
3300020435	Marine microbial communities from Tara Oceans - TARA_B100000586 (ERX556070-ERR599086)	Environmental	Open in IMG/M
3300020443	Marine microbial communities from Tara Oceans - TARA_B100001179 (ERX556000-ERR598944)	Environmental	Open in IMG/M
3300020444	Marine microbial communities from Tara Oceans - TARA_B100001245 (ERX556114-ERR598980)	Environmental	Open in IMG/M
3300020458	Marine microbial communities from Tara Oceans - TARA_B100000749 (ERX556123-ERR599000)	Environmental	Open in IMG/M
3300020466	Marine microbial communities from Tara Oceans - TARA_B100001540 (ERX556059-ERR598968)	Environmental	Open in IMG/M
3300020472	Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)	Environmental	Open in IMG/M
3300021089	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015	Environmental	Open in IMG/M
3300021345	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021352	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 150m 12015	Environmental	Open in IMG/M
3300021443	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300025199	Marine microbial communities from the Deep Pacific Ocean - MP1648 (SPAdes)	Environmental	Open in IMG/M
3300025204	Marine microbial communities from the Deep Atlantic Ocean - MP0203 (SPAdes)	Environmental	Open in IMG/M
3300025221	Marine microbial communities from the Deep Atlantic Ocean - MP0372 (SPAdes)	Environmental	Open in IMG/M
3300025265	Marine microbial communities from the Deep Pacific Ocean - MP2098 (SPAdes)	Environmental	Open in IMG/M
3300025863	Marine microbial communities from the Deep Pacific Ocean - MP1788 (SPAdes)	Environmental	Open in IMG/M
3300026087	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026119	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300026207	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV82 (SPAdes)	Environmental	Open in IMG/M
3300026208	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72 (SPAdes)	Environmental	Open in IMG/M
3300026268	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253 (SPAdes)	Environmental	Open in IMG/M
3300026269	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263 (SPAdes)	Environmental	Open in IMG/M
3300027630	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_800m (SPAdes)	Environmental	Open in IMG/M
3300028190	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000m	Environmental	Open in IMG/M
3300028488	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1320m	Environmental	Open in IMG/M
3300028489	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1000m	Environmental	Open in IMG/M
3300028535	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_500m	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300031773	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915	Environmental	Open in IMG/M
3300031800	Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051	Environmental	Open in IMG/M
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental	Open in IMG/M
3300031802	Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057	Environmental	Open in IMG/M
3300031803	Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983	Environmental	Open in IMG/M
3300031804	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M
3300032032	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPjun08P12500mDRAFT_10558561	3300000152	Marine	SHFRDRTFXFCDAVEVLPSSHPQGMFSTAVPRFLPDKLEPLGFSLPGQLRVAS*
LPjun09P16500mDRAFT_10062484	3300000179	Marine	VYERKFCDAVEVLPSSHPQGMFSTAVPRFLPDKLEPLGFSLPGQLRVAS*
LPjun09P12500mDRAFT_10069201	3300000222	Marine	TFKFCDAVEVLPSSPPRELFSTTAPRFLPYKLEPLGFSLSGQLRVAS*
LPjun09P12500mDRAFT_10142101	3300000222	Marine	AVEVLPSSHPQGMFSTPVPHFLPVELTPLGLSSTGQLRVAS*
JGI12060J13090_1026452	3300000971	Deep Ocean	LPSSLPQGLFSTTDPCFLPGKLEPLGFSPPGQLRVAS*
JGI12156J13080_1025443	3300001126	Deep Ocean	SSLPQGLFSTTDPCFLPGKLEPLGFSSPGQLRVAS*
MCRcombined_14483631	3300001459	Hydrothermal Vent Plume	SHLRGMFSTAVPRFLPDKLEPLGLSLSGQLRVAS*
TuiMalila_10264512	3300001676	Black Smokers Hydrothermal Plume	TFKFCDAVEVLPSSLPRELFSTTAPRFLPGKLEPLGLSLPGQLRVAS*
Mariner_10016381	3300001678	Black Smokers Hydrothermal Plume	VLPSSLPRELFSTTAPRFLPDKLEPLGLSLSGQLRVAS*
TahiMoana_10334414	3300001679	Black Smokers Hydrothermal Plume	AVEVLPSSHLRGMFSTAVPRFLPDKLEPLGFSLPGQLRVAS*
KiloMoana_100328414	3300001680	Black Smokers Hydrothermal Plume	AVEVLPSSLPRELFSTTAPRFLPDKLEPLGFSLSGQLRVAS*
KiloMoana_100594891	3300001680	Black Smokers Hydrothermal Plume	AVEVLPSSHLRGMFSTAVPRFLPDKLEPLGLSLSGQLRVAS*
supr60_10110741	3300001769	Hydrothermal Vent Plume	VLPSSHLRGMFSTAVPRFLPDKLEPLGLSLSGQLRVAS*
Vondamm_100371131	3300001783	Hydrothermal Vent Plume	AVEVLPSSLPRELFSTTAPRFLPDKLEPLGLSLSGQLRVAS*
Ga0066858_101375201	3300005398	Marine	AVEVLPSSLPRELFSTTAPRFLPDKLGPLGFSLPGQLRVAS*
Ga0066860_100691661	3300005399	Marine	VCDAVEVLPSSLPQGLFSTTDPCFLPGKLEPLGFSSPGQLRVAS*
Ga0066860_102254901	3300005399	Marine	VCDAVEVLPSSLPQGLFSTTDPCFLPGKLEPLGFSPPGQLRVAS*
Ga0066848_100110524	3300005408	Marine	EVLPSSLPRELFSTTAPRFLPDKLGPLGFSLPGQLRVAS*
Ga0066859_101676282	3300005425	Marine	FCDAVEVLPSSPPRELFSTTAPRFLPDKLEPLGFSLPGQLRVAS*
Ga0066846_100519932	3300005429	Marine	FCDAVEVLPSSPPRELFSTTAPRFLPDKLGPLGFSLPGQLRVAP*
Ga0066849_102579331	3300005430	Marine	HFRDRTFKFCDAVEVLPSSHPQGLFSTTAPRFLPDELEPLGFSSPGQLRVAS*
Ga0066838_102094961	3300005592	Marine	SLPRELFSTTAPRFLPDKLGPLGFSLPGQLRVAS*
Ga0066850_100144006	3300005605	Marine	SHFRDRTFKFCDAVEVLPSSHPQGLFSTTAPRFLPDELEPLGFSSPGQLRVAS*
Ga0066380_102797242	3300005948	Marine	FCDAVEVLPSSHPQGMFSTAVPRFLPDKLEPLGLSLPGQLRVAS*
Ga0066383_100171744	3300005953	Marine	VLPSSLPRELFSTTAPRFLPDKLEPLGLSLPGQLRVAS*
Ga0066383_101329172	3300005953	Marine	PSSLPRELFSTTAPRFLPDKLEPLGLSLSGQLRVAS*
Ga0066368_100165831	3300006002	Marine	FCDAVEVLPSSLPRELFSTTAPRFLPDKLEPLGLSLPGQLRVAS*
Ga0066374_100861852	3300006012	Marine	RTFNFCDAVEVLPSSLPRELFSTTAPRFLPDKLEPLGLSLPGQLRVAS*
Ga0066374_101229291	3300006012	Marine	VEVLPSSLPRELFSTTAPRFLPYKLEPLGFSLSGQLRVAS*
Ga0066382_100216931	3300006013	Marine	SLPRELFSTTAPRFLPDKLEPLGFSLSGQLRVAS*
Ga0066382_100357654	3300006013	Marine	RTFKFCDAVEVLPSSLPRELFSTTAPRFLPGKLEPLGLSLPGQLRVAS*
Ga0066375_100357264	3300006019	Marine	RTFKFCDAVEVLPSSLPRELFSTTAPRFLPYKLEPLGFSLSGQLRVAS*
Ga0066836_109300151	3300006166	Marine	YRTFKFCDAVEVLPSSQSREMFSTAVSRFLPFKLEPLGFSLNGQLRVAS*
Ga0068470_11532192	3300006308	Marine	VLPSPQLRGMFSTAVPRFLPYKLEPLGFSLPGQLRVAS*
Ga0068483_15953831	3300006330	Marine	PSSHLRGMFSTAVPRFLPDKLGPLGFSLSGQLRVAS*
Ga0068493_103424413	3300006341	Marine	FNFCDAVEVLPSPPPRGLFSTTSPHFLPDKLEPLGFSLPGQLRVAS*
Ga0098033_11428902	3300006736	Marine	PSSQPRGMFSTAVPRFLPVELKPLGLSPTGQLRVAS*
Ga0098055_11587761	3300006793	Marine	MNKKGKGIKNQRLSSFRYLTFKFCDAVEVLPSSQSREMFSTAVSRFLPFKLEPLGQSRD*
Ga0066372_100680644	3300006902	Marine	YRTFNFCDAVEVLPSSLPRELFSTTAPRFLPDKLEPLGFSLPGQLRVAY*
Ga0066372_101086322	3300006902	Marine	RYRTFNFCDAVEVLPSSPPRGLFSTTSPHFLPDKLEPLSFSLPGQLRVAS*
Ga0066372_103072762	3300006902	Marine	FKFCDAVEVLPSSPLRELFSTTAPRFLPGKLEPLGLSLPGQLRVAS*
Ga0066372_103610511	3300006902	Marine	KTERFSHFRDRTFKFCDAVEVLPSSPLRELFSTTAPRFLPGKLEPLGLSLPGQLRVAS*
Ga0066372_107245832	3300006902	Marine	RTFKFCDAVEVLPSSPPRELFSTTAPRFLPYKLEPLGFSLSGQLRVAS*
Ga0066367_10145985	3300007291	Marine	CDAVEVLPSSPPRELFSTTAPRFLPYKLEPLGFSLSGQLRVAS*
Ga0066367_13393521	3300007291	Marine	PSSHPQGMFSTAVPRFLPDKLEPLGLFLPGQLRVAS*
Ga0105015_11461231	3300007770	Marine	HFRVRTLKVCDAVEVLPSSLPQGLFSTTAPRFLPFRLEPLGFSLNGQLRVAS*
Ga0117902_14793651	3300009104	Marine	FCDAVEVLPSSPPRELFSTTAPRFLPCKLEPFGLSLPGQLRVAP*
Ga0114993_105634311	3300009409	Marine	ELLSSPPRELFSSTYSHFLPVKLEPLGFSLTGQLRVAS*
Ga0114932_103763852	3300009481	Deep Subsurface	DAVEVLPSSLSQEMFSTAFSHFLPFKLEPLGFSLNGQLRVAS*
Ga0115011_119377081	3300009593	Marine	VALKKTERFSHFRDRTFKFCDAVEVLPSSHPQGLFSTTAPHFLPDELEPLGFSSPGQLRVAS
Ga0133547_114268841	3300010883	Marine	GVVFKNQRFSHFRDRTFNFCDAVEVLPSSLPRELFSTTAPRFLPGKLEPLGFSLPGQLRVAP*
Ga0211669_10386782	3300020254	Marine	LQVIKNQRFSHFRDRTFNFCDAVEVLPSSLPRELFSTTAPRFLPGKLEPLGFSLPGQLRVAS
Ga0211680_101098121	3300020389	Marine	DAVEVLPSSLPQGLFSTTNPCFLPGKLEPLGFSSPGQLRVAS
Ga0211553_100927691	3300020415	Marine	SSFRYRTFNFCDAVEVLPSSPPRGLFSTTSPHFLPDKLEPLGFSLPGQLRVAS
Ga0211512_104007262	3300020419	Marine	TFKFCDAVEVLPSSLSQEMFSTAVSCFLPFKLEPLGFSLNGQLRVAS
Ga0211549_100096471	3300020425	Marine	PSSPPRELFSTTAPRFLPDKLEPLGLSLSGQLRVAS
Ga0211549_100965861	3300020425	Marine	YRTFNFCDAVEVLPSSLPQGLFSTTSPHFLPDKLEPFGFSLPGQLRVAS
Ga0211549_101908201	3300020425	Marine	AVEVLPSSPPRELFSTTAPRFLPYKLEPFGFSLSGQLRVAS
Ga0211549_102629071	3300020425	Marine	PSSQLRGMFSTAVPRFLPGKLGPLGLSLPGQLRVAS
Ga0211536_101919462	3300020426	Marine	TFKFCDAVEVLPSSLPRELFSTTAPRFLPGKLEPLGFSLPGQLRVAS
Ga0211670_103491141	3300020434	Marine	VLPSSPPRELFSTTAPRFLPDKLEPLGLSLSGQLRVAS
Ga0211639_102191211	3300020435	Marine	VYERKFCDAVEVLPSSHPQGMFSTAVPHFLPDKLEPLGFSLPGQLR
Ga0211544_100224661	3300020443	Marine	VLPSSLPRKLFSTTAPRFLPYKLEPFGLSLSGQLRVAS
Ga0211578_100212474	3300020444	Marine	CDAVEVLPSSPPRELFSTTAPRFLPDKLEPLGFSLPGQLRVAS
Ga0211578_100514683	3300020444	Marine	CDAVEVLPSSPPRELFSTTAPRFLPYKLEPLGFSLSGQLRVAS
Ga0211697_100288894	3300020458	Marine	PSSLPRELFSTTAPRFLPGKLEPLGLSLSGQLRVAS
Ga0211714_106009641	3300020466	Marine	TFKFCDAVEVLPSSPPQEMFSTAVSRFLPFKLEPLGFSLNGQLRVAS
Ga0211579_100645391	3300020472	Marine	VEVLPSSLSQEMFSTAFSHFLPLKLEPLGFSLNGQLRVAS
Ga0211579_101921401	3300020472	Marine	IKNQRFSRFPYRTFKFCDAVEVLPSPLPQEMFSTAVSRFLPFKIEPLGFSLNGQLRVAS
Ga0206679_100272351	3300021089	Seawater	VEVLPSSQSREMFSTAVSRFLPFKLEPLGFSLNGQLRVAS
Ga0206688_106756981	3300021345	Seawater	AVEVLPSSQPRGMFSTAVPRFLPDKLEPLGFSLPGQLRVAS
Ga0206680_103843911	3300021352	Seawater	VEVLPSSHPQGMFSTAVPRFLPDKLEPLGFSLPGQLRVAS
Ga0206681_104319301	3300021443	Seawater	SSLPQELFSTTAPCFLPGKLEPLGFSLPGQLRVAS
Ga0226832_102374981	3300021791	Hydrothermal Vent Fluids	SPLPRELFSTTAPRFLPDNLEPLGLFLPGQLRVAS
Ga0187833_100271017	3300022225	Seawater	CDAVEVLPSSLPRELFSTTAPRFLPDKLGPLGFSLPGQLRVAS
Ga0208331_1225711	3300025199	Deep Ocean	EVLPSSHLRGMFSTAVPRFLPDKLEPLGLSLSGQLRVAS
Ga0208063_10157351	3300025204	Deep Ocean	DAVEVLPSSLPQGLFSTTDPCFLPGKLEPLGFSPPGQLRVAS
Ga0208336_10005571	3300025221	Deep Ocean	DRTFKFCDAVEVLPSSLPRELFSTTAPRFLPDKLEPLGLSLSGQLRVAS
Ga0208467_10495021	3300025265	Deep Ocean	SSLPRELFSTTAPRFLPDKLGPLGFSLPGQLRVAS
Ga0208833_10634811	3300025863	Deep Ocean	FCDAVEVLPSSLPRELFSTTAPRFLPDKLEPLGLSLSGQLRVAS
Ga0208113_10333601	3300026087	Marine	VLPSSLPRELFSTTAPRFLPDKLEPLGLSLPGQLRVAS
Ga0207966_10172814	3300026119	Marine	AVEVLPSSLPRELFSTTAPRFLPDKLEPLGLSLPGQLRVAS
Ga0207966_10292683	3300026119	Marine	AVEVLPSSLPRELFSTTAPRFLPDKLEPLGLSLSGQLRVAS
Ga0208895_11216702	3300026207	Marine	TFNFCDAVEVLPSPLPRELFSTTAPRFLPGKLEPLGFSLPGQLRVAP
Ga0208895_11249641	3300026207	Marine	EVLPSSRPQGMFSTAVPRFLPDKLEPLGFSLPGQLRVAS
Ga0208640_10270031	3300026208	Marine	VEVLPSSPPRELFSTTAPRFLPDKLGPLGFSLPGQLRVAS
Ga0208641_10673782	3300026268	Marine	CDAVEVLPSSHPQGLFSTTAPRFLPDELEPLGFSSPGQLRVAS
Ga0208766_10100341	3300026269	Marine	TFKFCDAVEVLPSSQSREMFSTAVSRFLPFKLEPLGFSLNGQLRVAS
Ga0209432_11257802	3300027630	Marine	EVLPSSLPRELFSTTAPRFLPDKLEPLGFSLSGQLRVAS
Ga0257108_10373061	3300028190	Marine	FCDAVEVLPSPLPRELFSTTAPRFLPDKLEPLGLSLPGQLRVAS
Ga0257113_11596481	3300028488	Marine	EVLPSSPPRELFSTTAPRFLPDKLKPLGLSLPGQLRVAS
Ga0257112_100463791	3300028489	Marine	SHFRDRTFNFCDAVEVLPSSLPRELFSTTAPRFLPDKLEPLGFSLSGQLRVAS
Ga0257112_101135781	3300028489	Marine	EVLPSSPPRELFSTTAPRFLPYKLEPLGFSLSGQLRVAS
Ga0257112_101374861	3300028489	Marine	NQRFSHFRDRTFNFCDAVEVLPSSPPRELFSTTAPRFLPDKLEPLGLSLSGQLRVAS
Ga0257111_10554541	3300028535	Marine	NKPKFTHPKVYEQKFCDAVEVLPSSPLRELFSTTAPRFLPGKLEPLGLSLSGQLRVAS
Ga0315328_103225821	3300031757	Seawater	VLPSSHPQGLFSTTAPRFLPDELEPLGFSSPGQLRVAS
Ga0315328_107055761	3300031757	Seawater	SSLPQELFSTTAPCFLPGKLEPLGFSLSGQLRVAS
Ga0315332_109088741	3300031773	Seawater	FNFCDAVEVLPSSPPRGLFSTTSPHFLPDKLEPLGFSLPGQLRVAS
Ga0310122_102250541	3300031800	Marine	MGSFKKTERFSHFRDRTFKFCDAVEVLPSSLPQGMFSTAVPCFLPDELEPLGFSSSGQLRVAS
Ga0310122_102723311	3300031800	Marine	VEVLPSSLPRELFSTTAPRFLPDKLEPLGLSLSGQLRVAS
Ga0310121_106009281	3300031801	Marine	EVLPSPLPRELFSTTAPRFLPDKLEPLGLSLSGQLRVAS
Ga0310123_104851232	3300031802	Marine	AVEVLPSSLPQELFSTTAPCFLPGKLEPLGFSLPGQLRVAS
Ga0310120_106382721	3300031803	Marine	RTFKFCDAVEVLPSSHPQGMFSTAVPRFLPDKLEPLGLSLPGQLRVAS
Ga0310124_101181943	3300031804	Marine	QRFSHFRDRTFNFCDAVEVLPSSLPRELFSTTAPRFLPGKLEPLGFSLPGQLRVAP
Ga0315318_102778981	3300031886	Seawater	EVLPSSHPQGMFSTAVPHFLPDKLEPLGLSLPGQLRVAS
Ga0315327_108639401	3300032032	Seawater	DRTFKFCDAVEVLPSSHPQGMFSTAIPHFLPDKLEPLGLSLPGQLRVAS
Ga0310345_120160411	3300032278	Seawater	VEVLPSSRPQGMFSTPVPHFLPVELIPLGLSSTGQLRVAS
Ga0310345_124539981	3300032278	Seawater	SSHPRGMFSTAVPRFLPDKLEPLGLSLSGQLRVAS
Ga0315334_101639401	3300032360	Seawater	VEVLPSSPPRKLFSTTAPRFLPYKLEPLGFSSSGQLRVAS
Ga0315334_107046581	3300032360	Seawater	DEVLPSSLPQGLFSTTDPCFLPGKLEPLGFFPPGQLRVAS
Ga0315334_117509861	3300032360	Seawater	VEVLPSSPPRELFSTTAPRFLPYKLEPLGFSLPGQLRVAS
Ga0315334_119043961	3300032360	Seawater	CDAVEVLPSSLPRELFSTTAPRFLPYKLEPLGFSLSGQLRVAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084703

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences