Metagenome / Metatranscriptome Family F070125

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070125
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	88 residues
Representative Sequence	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGSGS
Number of Associated Samples	79
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.36 %
% of genes near scaffold ends (potentially truncated)	40.65 %
% of genes from short scaffolds (< 2000 bps)	73.98 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.293 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment (25.203 % of family members)
Environment Ontology (ENVO)	Unclassified (47.967 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (34.146 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.33% β-sheet: 22.09% Coil/Unstructured: 25.58%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00383	dCMP_cyt_deam_1	45.53
PF11845	DUF3365	4.07
PF07498	Rho_N	3.25
PF11342	DUF3144	3.25
PF04828	GFA	2.44
PF00903	Glyoxalase	1.63
PF07883	Cupin_2	1.63
PF00006	ATP-synt_ab	1.63
PF10041	DUF2277	0.81
PF09832	DUF2059	0.81
PF00881	Nitroreductase	0.81
PF02152	FolB	0.81
PF14534	DUF4440	0.81
PF05728	UPF0227	0.81
PF06718	DUF1203	0.81
PF13302	Acetyltransf_3	0.81
PF00174	Oxidored_molyb	0.81
PF00581	Rhodanese	0.81
PF06094	GGACT	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG3791	Uncharacterized conserved protein	Function unknown [S]	2.44
COG1539	Dihydroneopterin aldolase	Coenzyme transport and metabolism [H]	0.81
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.81
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.29 %
Unclassified	root	N/A	31.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.29 %
Unclassified	root	N/A	31.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.29 %
Unclassified	root	N/A	31.71 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.77 %
Unclassified	root	N/A	31.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	23.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.71 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	2.44 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	2.44 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.63 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.71 %
Halieaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae	2.44 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	2.44 %
Woeseiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae	1.63 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.71 %
unclassified Halieaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → unclassified Halieaceae	2.44 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	2.44 %
Woeseia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → Woeseia	1.63 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.71 %
gamma proteobacterium HIMB55	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → unclassified Halieaceae → gamma proteobacterium HIMB55	2.44 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	2.44 %
Woeseia oceani	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → Woeseia → Woeseia oceani	1.63 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001687\|WOR8_10000257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	65325	Open in IMG/M
3300001687\|WOR8_10006829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	11267	Open in IMG/M
3300001687\|WOR8_10014341	All Organisms → cellular organisms → Bacteria → Proteobacteria	8149	Open in IMG/M
3300001855\|JGI2160J19893_10015290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1810	Open in IMG/M
3300004023\|Ga0055441_10007148	All Organisms → cellular organisms → Bacteria	1789	Open in IMG/M
3300004023\|Ga0055441_10043058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	1005	Open in IMG/M
3300004023\|Ga0055441_10123177	Not Available	678	Open in IMG/M
3300004026\|Ga0055443_10015678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1560	Open in IMG/M
3300004026\|Ga0055443_10217129	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300004028\|Ga0055447_10020434	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300004029\|Ga0055442_10206457	Not Available	648	Open in IMG/M
3300004029\|Ga0055442_10269005	Not Available	578	Open in IMG/M
3300004073\|Ga0055516_10131142	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300004074\|Ga0055518_10154051	Not Available	582	Open in IMG/M
3300004075\|Ga0055519_10056189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	775	Open in IMG/M
3300004075\|Ga0055519_10176188	Not Available	528	Open in IMG/M
3300005182\|Ga0069000_10026323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → unclassified Halieaceae → gamma proteobacterium HIMB55	1184	Open in IMG/M
3300005182\|Ga0069000_10063070	All Organisms → cellular organisms → Bacteria → Proteobacteria	860	Open in IMG/M
3300005182\|Ga0069000_10160490	Not Available	592	Open in IMG/M
3300005214\|Ga0069002_10170049	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300005215\|Ga0069001_10024438	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300005215\|Ga0069001_10111441	Not Available	716	Open in IMG/M
3300005590\|Ga0070727_10000582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	43960	Open in IMG/M
3300005590\|Ga0070727_10005298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	10599	Open in IMG/M
3300005590\|Ga0070727_10067686	All Organisms → cellular organisms → Bacteria	2098	Open in IMG/M
3300005600\|Ga0070726_10042239	Not Available	2585	Open in IMG/M
3300005600\|Ga0070726_10331140	Not Available	768	Open in IMG/M
3300005612\|Ga0070723_10704800	Not Available	512	Open in IMG/M
3300006467\|Ga0099972_11877026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	897	Open in IMG/M
3300007784\|Ga0102955_1024633	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300007784\|Ga0102955_1056904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	956	Open in IMG/M
3300007784\|Ga0102955_1234203	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300009027\|Ga0102957_1083865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1103	Open in IMG/M
3300009033\|Ga0102956_1110336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	883	Open in IMG/M
3300009035\|Ga0102958_1118978	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300009509\|Ga0123573_11140870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	727	Open in IMG/M
3300010392\|Ga0118731_100876118	Not Available	1162	Open in IMG/M
3300010392\|Ga0118731_106711368	All Organisms → cellular organisms → Bacteria → Proteobacteria	15288	Open in IMG/M
3300010392\|Ga0118731_109754044	All Organisms → cellular organisms → Bacteria → Proteobacteria	5979	Open in IMG/M
3300010392\|Ga0118731_111642937	All Organisms → cellular organisms → Bacteria → Proteobacteria	6480	Open in IMG/M
3300010412\|Ga0136852_10072794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3564	Open in IMG/M
3300010412\|Ga0136852_10227608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1856	Open in IMG/M
3300010412\|Ga0136852_10470178	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300010412\|Ga0136852_11821770	Not Available	574	Open in IMG/M
3300010412\|Ga0136852_12141258	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300010430\|Ga0118733_101936797	All Organisms → cellular organisms → Bacteria → Proteobacteria	1172	Open in IMG/M
3300010430\|Ga0118733_106373263	Not Available	616	Open in IMG/M
3300010430\|Ga0118733_106502541	Not Available	610	Open in IMG/M
3300010993\|Ga0139329_103180	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300010997\|Ga0139324_1002657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	2497	Open in IMG/M
3300019696\|Ga0194017_1023622	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300019698\|Ga0193986_1001351	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300019699\|Ga0193985_1000802	All Organisms → cellular organisms → Bacteria → Proteobacteria	2284	Open in IMG/M
3300019699\|Ga0193985_1008220	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300019699\|Ga0193985_1011067	Not Available	883	Open in IMG/M
3300019699\|Ga0193985_1048188	Not Available	522	Open in IMG/M
3300019700\|Ga0194006_1000111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4792	Open in IMG/M
3300019700\|Ga0194006_1026281	Not Available	651	Open in IMG/M
3300019701\|Ga0194015_1000691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	2486	Open in IMG/M
3300019702\|Ga0193997_1002220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1610	Open in IMG/M
3300019706\|Ga0193995_1007669	Not Available	1042	Open in IMG/M
3300019708\|Ga0194016_1039978	Not Available	573	Open in IMG/M
3300019709\|Ga0193967_1008876	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300019710\|Ga0194009_1040667	Not Available	585	Open in IMG/M
3300019711\|Ga0193993_1019453	Not Available	751	Open in IMG/M
3300019712\|Ga0193969_1049432	Not Available	549	Open in IMG/M
3300019713\|Ga0193987_1055694	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300019714\|Ga0193975_1054600	Not Available	521	Open in IMG/M
3300019719\|Ga0193977_1002189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1664	Open in IMG/M
3300019722\|Ga0193971_1010510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	999	Open in IMG/M
3300019727\|Ga0193976_1057945	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300019734\|Ga0193970_1038699	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300019735\|Ga0193990_1000876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2628	Open in IMG/M
3300019736\|Ga0194019_1063188	Not Available	535	Open in IMG/M
3300019743\|Ga0193992_1046371	Not Available	609	Open in IMG/M
3300019743\|Ga0193992_1066679	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300019744\|Ga0193998_1014021	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300019747\|Ga0193978_1086564	Not Available	503	Open in IMG/M
3300021337\|Ga0210341_1221720	All Organisms → cellular organisms → Bacteria → Proteobacteria	912	Open in IMG/M
3300021458\|Ga0193946_1010082	Not Available	1031	Open in IMG/M
3300021465\|Ga0193947_1012235	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300021465\|Ga0193947_1052388	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300022201\|Ga0224503_10000380	All Organisms → cellular organisms → Bacteria	13358	Open in IMG/M
3300022201\|Ga0224503_10151747	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300022202\|Ga0224498_10114037	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300022204\|Ga0224496_10407799	Not Available	548	Open in IMG/M
3300022206\|Ga0224499_10319557	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300022218\|Ga0224502_10001092	All Organisms → cellular organisms → Bacteria	9483	Open in IMG/M
3300022218\|Ga0224502_10002805	All Organisms → cellular organisms → Bacteria	6293	Open in IMG/M
3300022218\|Ga0224502_10127121	Not Available	972	Open in IMG/M
3300022218\|Ga0224502_10132422	Not Available	952	Open in IMG/M
3300022218\|Ga0224502_10184538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → unclassified Halieaceae → gamma proteobacterium HIMB55	800	Open in IMG/M
3300022220\|Ga0224513_10092440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1150	Open in IMG/M
3300022308\|Ga0224504_10025290	All Organisms → cellular organisms → Bacteria	2307	Open in IMG/M
3300022308\|Ga0224504_10095057	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300022389\|Ga0210318_1132335	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300022413\|Ga0224508_10334427	Not Available	964	Open in IMG/M
(restricted) 3300024057\|Ga0255051_10277038	Not Available	612	Open in IMG/M
(restricted) 3300024059\|Ga0255040_10019497	All Organisms → cellular organisms → Bacteria → Proteobacteria	2331	Open in IMG/M
(restricted) 3300024517\|Ga0255049_10036756	All Organisms → cellular organisms → Bacteria	2233	Open in IMG/M
(restricted) 3300024519\|Ga0255046_10546174	Not Available	557	Open in IMG/M
3300025539\|Ga0210109_1059346	Not Available	609	Open in IMG/M
3300025561\|Ga0210119_1007195	All Organisms → cellular organisms → Bacteria → Proteobacteria	1978	Open in IMG/M
3300025561\|Ga0210119_1013916	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300025566\|Ga0210140_1048989	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300025974\|Ga0210118_1023196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	916	Open in IMG/M
3300025995\|Ga0210079_1074636	Not Available	555	Open in IMG/M
3300026106\|Ga0209927_1035604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → unclassified Halieaceae → gamma proteobacterium HIMB55	681	Open in IMG/M
3300027790\|Ga0209273_10000582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → Woeseia → Woeseia oceani	44172	Open in IMG/M
3300027790\|Ga0209273_10030816	Not Available	2563	Open in IMG/M
3300027790\|Ga0209273_10048925	All Organisms → cellular organisms → Bacteria	1959	Open in IMG/M
3300027814\|Ga0209742_10000823	All Organisms → cellular organisms → Bacteria	15464	Open in IMG/M
3300027814\|Ga0209742_10001535	Not Available	10305	Open in IMG/M
3300027814\|Ga0209742_10004422	All Organisms → cellular organisms → Bacteria → Proteobacteria	5166	Open in IMG/M
3300027820\|Ga0209578_10319440	Not Available	719	Open in IMG/M
(restricted) 3300027856\|Ga0255054_10000003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → Woeseia → Woeseia oceani	123787	Open in IMG/M
(restricted) 3300027856\|Ga0255054_10001838	All Organisms → cellular organisms → Bacteria	12357	Open in IMG/M
(restricted) 3300027856\|Ga0255054_10024090	All Organisms → cellular organisms → Bacteria → Proteobacteria	3112	Open in IMG/M
(restricted) 3300027856\|Ga0255054_10360914	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300028599\|Ga0265309_10211611	Not Available	1217	Open in IMG/M
3300028600\|Ga0265303_10047040	All Organisms → cellular organisms → Bacteria → Proteobacteria	3021	Open in IMG/M
3300032231\|Ga0316187_10082129	All Organisms → cellular organisms → Bacteria → Proteobacteria	2539	Open in IMG/M
3300032252\|Ga0316196_10219690	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.12%
Terrestrial	Environmental → Terrestrial	4.88%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	62.60%
Freshwater	Environmental → Aquatic → Freshwater	26.83%
Sediment	Environmental → Aquatic → Sediment	4.88%
Soil	Environmental → Terrestrial → Soil	4.88%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.81%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Sediment	25.20%
Wetlands	Environmental → Aquatic → Marine → Wetlands	19.51%
Coastal	Environmental → Aquatic → Marine → Coastal	16.26%
Sediment	Environmental → Aquatic → Marine → Sediment	11.38%
Oceanic	Environmental → Aquatic → Marine → Oceanic	5.69%
Inlet	Environmental → Aquatic → Marine → Inlet	4.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.63%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.63%
Strait	Environmental → Aquatic → Marine → Strait	1.63%
Subtidal Zone	Environmental → Aquatic → Marine → Subtidal Zone	1.63%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	25.20%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	19.51%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	16.26%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	11.38%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	5.69%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	4.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.63%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.63%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	1.63%
Sediment	Environmental → Aquatic → Marine → Subtidal Zone → Sediment	1.63%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	25.20%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	19.51%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	11.38%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	10.57%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	5.69%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	4.88%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	4.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.88%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	4.06%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	1.63%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.63%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	1.63%
Sediment	Environmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment	1.63%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Sediment	0.81%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	0.81%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001687	Deep Marine Sediments WOR-3-8_10	Environmental	Open in IMG/M
3300001855	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12	Environmental	Open in IMG/M
3300004023	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordA_D2	Environmental	Open in IMG/M
3300004026	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordC_D2	Environmental	Open in IMG/M
3300004028	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordC_D2	Environmental	Open in IMG/M
3300004029	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordB_D2	Environmental	Open in IMG/M
3300004073	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_CordB_D2	Environmental	Open in IMG/M
3300004074	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D1	Environmental	Open in IMG/M
3300004075	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqB_D1	Environmental	Open in IMG/M
3300005182	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Tolay_CordA_D2	Environmental	Open in IMG/M
3300005214	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Tolay_CordC_D2	Environmental	Open in IMG/M
3300005215	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Tolay_CordB_D2	Environmental	Open in IMG/M
3300005590	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2	Environmental	Open in IMG/M
3300005600	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.1	Environmental	Open in IMG/M
3300005612	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2	Environmental	Open in IMG/M
3300006467	Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935	Environmental	Open in IMG/M
3300007784	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_D1_MG	Environmental	Open in IMG/M
3300009027	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG	Environmental	Open in IMG/M
3300009033	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_D2_MG	Environmental	Open in IMG/M
3300009035	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_D1_MG	Environmental	Open in IMG/M
3300009509	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11	Environmental	Open in IMG/M
3300010392	Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385	Environmental	Open in IMG/M
3300010412	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10	Environmental	Open in IMG/M
3300010430	Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples	Environmental	Open in IMG/M
3300010993	ECM15MPS05_Bassembled -- Sediment microbial communities from coastal marsh in Port Sulphur, LA sequencing method B (2X150bp)	Environmental	Open in IMG/M
3300010997	ECM15MPS05_Aassembled -- Sediment microbial communities from coastal marsh in Port Sulphur, LA sequencing method A (2X250bp)	Environmental	Open in IMG/M
3300019696	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_3-4_MG	Environmental	Open in IMG/M
3300019698	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRC_2-3_MG	Environmental	Open in IMG/M
3300019699	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRC_1-2_MG	Environmental	Open in IMG/M
3300019700	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLC_2-3_MG	Environmental	Open in IMG/M
3300019701	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_1-2_MG	Environmental	Open in IMG/M
3300019702	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_3-4_MG	Environmental	Open in IMG/M
3300019706	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_1-2_MG	Environmental	Open in IMG/M
3300019708	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_2-3_MG	Environmental	Open in IMG/M
3300019709	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_3-4_MG	Environmental	Open in IMG/M
3300019710	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLC_5-6_MG	Environmental	Open in IMG/M
3300019711	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLC_4-5_MG	Environmental	Open in IMG/M
3300019712	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_5-6_MG	Environmental	Open in IMG/M
3300019713	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRC_3-4_MG	Environmental	Open in IMG/M
3300019714	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRT_2-3_MG	Environmental	Open in IMG/M
3300019719	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRT_4-5_MG	Environmental	Open in IMG/M
3300019722	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_7-8_MG	Environmental	Open in IMG/M
3300019727	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRT_3-4_MG	Environmental	Open in IMG/M
3300019734	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_6-7_MG	Environmental	Open in IMG/M
3300019735	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLC_1-2_MG	Environmental	Open in IMG/M
3300019736	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_5-6_MG	Environmental	Open in IMG/M
3300019743	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLC_3-4_MG	Environmental	Open in IMG/M
3300019744	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_4-5_MG	Environmental	Open in IMG/M
3300019747	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRT_5-6_MG	Environmental	Open in IMG/M
3300021337	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.425 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021458	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_1-2_MG	Environmental	Open in IMG/M
3300021465	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRT_0-1_MG	Environmental	Open in IMG/M
3300022201	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_21	Environmental	Open in IMG/M
3300022202	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_21	Environmental	Open in IMG/M
3300022204	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_8_1	Environmental	Open in IMG/M
3300022206	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_24	Environmental	Open in IMG/M
3300022218	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_13	Environmental	Open in IMG/M
3300022220	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_21	Environmental	Open in IMG/M
3300022308	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_24	Environmental	Open in IMG/M
3300022389	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.24 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022413	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_21	Environmental	Open in IMG/M
3300024057 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_9	Environmental	Open in IMG/M
3300024059 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_2	Environmental	Open in IMG/M
3300024517 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3	Environmental	Open in IMG/M
3300024519 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_27	Environmental	Open in IMG/M
3300025539	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025561	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025566	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025974	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Tolay_CordA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025995	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_CordA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026106	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_D1_MG (SPAdes)	Environmental	Open in IMG/M
3300027790	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.1 (SPAdes)	Environmental	Open in IMG/M
3300027814	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-3-8_10 (SPAdes)	Environmental	Open in IMG/M
3300027820	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2 (SPAdes)	Environmental	Open in IMG/M
3300027856 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_23	Environmental	Open in IMG/M
3300028599	Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160524 (Illumina Assembly)	Environmental	Open in IMG/M
3300028600	Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160317 (Illumina Assembly)	Environmental	Open in IMG/M
3300032231	Coastal sediment microbial communities from Maine, United States - Cross River worm burrow 1	Environmental	Open in IMG/M
3300032252	Coastal sediment microbial communities from Maine, United States - Eddy sediment 2 cm	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
WOR8_1000025759	3300001687	Marine Sediment	VTTAEERRQWIEALQAYREDSERLFALVASLANLLDEEMVVETMESVLGIAAVHDEDCVIFDDLAIRFGSDGRVKSVFRTIDGSGKGT*
WOR8_1000682912	3300001687	Marine Sediment	VTTAEQRRQWIEALHAYQDDSDRLFGLVASLANLLDRALVIETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGSGS*
WOR8_100143419	3300001687	Marine Sediment	VTTAEERRQWIEALHAYRDDSERLFGLVASLANLLDRNLVIETMESVLGITAIHDGDCIIFDDLAIRFGSDGRVKSVFRTIDGSAGDMARPD*
JGI2160J19893_100152903	3300001855	Marine Sediment	VTTAEQRRQWIEALHAYQDDSDRLFELVASLANLLDRALVVETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGSGS*
Ga0055441_100071482	3300004023	Natural And Restored Wetlands	MTSADDRRRWIEALHAYRDDSERLFALVASLANLLDRTLVVETMESVLGVTAVHDGDCVIFDDFAIRFGSDDRVKSVFRTIDGSVKGD*
Ga0055441_100430583	3300004023	Natural And Restored Wetlands	TPCSGPLTSSGNAYPVTTAEERRQWIEALQAYRDDSERLFALVASLANLLDEEMVVETMESVLGIVAVHDNDCVIFNDLAIRFGSDGRVKSVFRTIDGSGNGT*
Ga0055441_101231771	3300004023	Natural And Restored Wetlands	VTSAEQRLQWIEALHAYRDDSERLFGLVANLANLLDHTLVVETMESVLGITAEHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGPGSGN*
Ga0055443_100156784	3300004026	Natural And Restored Wetlands	MTTAEQRRLWMEALHAYRDDSERLFGLVASVANLLDKALVIETMESVLGVVAVHDGDCVVFDDLAIRFGSDDRVKSVFRIIDGTAGDVTQAD*
Ga0055443_102171292	3300004026	Natural And Restored Wetlands	VTSADDKRRWTEALHAYRDDSERLFGLVASLANLLDRTLVVETIESVLGVTAVHEDDCVIFDDFAIRFGSDDRVKSVFRTIDDSDNGN*
Ga0055447_100204343	3300004028	Natural And Restored Wetlands	VTTAEERRQWIEALQAYRDDSERLFALVASLANLLDEEMVVETMESVLGIVAVHDNDCVIFNDLAIRFGSDGRVKSVFRTIDGSGNGT*
Ga0055442_102064571	3300004029	Natural And Restored Wetlands	SSGNAYPVTTAEERRQWIEALQAYRDDSERLFALVASLANLLDEEMVVETMESVLGIVAVHDNDCVIFNDLAIRFGSDGRVKSVFRTIDGSGNGT*
Ga0055442_102690051	3300004029	Natural And Restored Wetlands	VTSAEDRRRWIEALHAYRDDSERLFGLVASLANLLDRALVVETMESVLGVTAVHEGDCVIFDDFAIRFGSDDRVKSVFRTIDGSGNGG*
Ga0055516_101311421	3300004073	Natural And Restored Wetlands	VTSAEDKRRWIEALAAYRDDSERLFGLVASLANLLDRTLVVETMESVLGVTAVHEGDCVIFDDFAIRFGSDDRVKSVFRTIDGTINGD*
Ga0055518_101540511	3300004074	Natural And Restored Wetlands	MTSAEDKRRWIEALHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGVTAVHEGDCVIFDDFAIRFGSDDRVKSVFRTIDGTGSGG*
Ga0055519_100561892	3300004075	Natural And Restored Wetlands	VTSAEDKRRWIEALHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGVTAVHEGDCVIFDDFAIRFGSDDRVKSVFRTIDGTGSGG*
Ga0055519_101761882	3300004075	Natural And Restored Wetlands	ARYFELAGRPGNAAPVTSAEDRRGLIEALQAYREDSERMFTLVANLANLLDRPQVVETMESVLGVTAVHDGDCVIFDDLAIRFGSDDRVRSVFRTIDGSAHED*
Ga0069000_100263231	3300005182	Natural And Restored Wetlands	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRKLIIETMESVLGIAAVHDGDCIIFDDLAIRFGSDDRVKSVFRTIDGSGSDGTRAD*
Ga0069000_100630702	3300005182	Natural And Restored Wetlands	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDKNLVIETMESVLGITAVHDGDCIIFDDLAIRFGSDGRVKSVFRTIDGTGGNGTRAD*
Ga0069000_101604902	3300005182	Natural And Restored Wetlands	GRIYPIGPDPVTSAEQRLQWIEALHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGPGSGN*
Ga0069002_101700492	3300005214	Natural And Restored Wetlands	VTTAEERRQWIEALQAYRDDSERLFALVASLANLLDEEMVVETMESVLGIVAVHDNDCVIFNDLAIRFGSDGRVKSVFRTIDGSGN
Ga0069001_100244383	3300005215	Natural And Restored Wetlands	VTSEEDRLRWIEALHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGVTAVHEGDCVIFDDFAIRFGSDDRVKSVFRTIDGSVKGD*
Ga0069001_101114412	3300005215	Natural And Restored Wetlands	GDTVPVTSADDKRRWTEALHAYRDDSERLFGLVASLANLLDRTLVVETIESVLGVTAVHEDDCVIFDDFAIRFGSDDRVKSVFRTIDDSDNGN*
Ga0070727_1000058233	3300005590	Marine Sediment	LTDQDQKRQWMEALHEYSNDQERLFGLVASLANLLDKDLVVETMQSVLGIEPVHDGNRVIFDDLEIQFGQDNRVKSITRTIDGSREYEI*
Ga0070727_100052983	3300005590	Marine Sediment	MEALHAYSDDQDRLFGLVASLANLLDKDLVVETMQSVLGIEPVHDGDCVIFDDFAIQFGQDNRVKSVYRTIDGSKEFDT*
Ga0070727_100676861	3300005590	Marine Sediment	YSGRQALTDQDEKRQWMEALHEYSSDQERLFGLVANLANLLDKDLVVETMQSVLGIEPVHDGDCVIFDDLAIRFGKDGRVKSIFRTIDGSKEYET*
Ga0070726_100422393	3300005600	Marine Sediment	LTDQDEKRQWMEALHEYSSDQERLFGLVANLANLLDKDLVVETMQSVLGIEPVHDGDCVIFDDLAIRFGKDGRVKSIFRTIDGSKEYET*
Ga0070726_103311402	3300005600	Marine Sediment	LTDQEQKRQWMEALHEYSNDQERLFSLVASLANLLDKDLVVETMQSVLGIEPVHNGDCVIFDDLEIQFGKDDRVKSITRTIDGSREYEI*
Ga0070723_107048001	3300005612	Marine Sediment	LTDLDERRQWMEALHEYSNDQERLFGLVANLANLLDKDLVVETMQSVLGIEPVYDGDSVIFDDLAIRFGQDNRVKSIFR
Ga0099972_118770263	3300006467	Marine	RQWMEALHEYSNDQERLFGLVASLANLLDKDLVVETMQSVLGIEPVHDGNRVIFDDLEIQFGQDNRVKSITRTIDGSREYEI*
Ga0102955_10246333	3300007784	Soil	VTSAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGITAEHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGPGSGN*
Ga0102955_10569042	3300007784	Soil	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRKLIIETMESVLGIAAVHDGDCIIFDDLAIRFGSDDRVKSVFRTIDGLGSDGTRAD*
Ga0102955_12342032	3300007784	Soil	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRSLVVETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGPGAG
Ga0102957_10838653	3300009027	Pond Water	IYPIGLDPVTSAEQRLQWIEALHAYRDDSERLFGLVANLANLLDHTLVVETMESVLGITAEHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGPGSGN*
Ga0102956_11103362	3300009033	Soil	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRSLVVETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGPGAGN*
Ga0102958_11189783	3300009035	Soil	VTSADDKRRWTEALHAYRDDSERLFGLVASLANLLDRKLIIETMESVLGIAAVHDGDCIIFDDLAIRFGSDDRV
Ga0123573_111408702	3300009509	Mangrove Sediment	MTSADDRRRWIEALHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGVTAVHDGDCVIFDDFAIRFGSDDRVKSVFRTIDGSAKGD*
Ga0118731_1008761183	3300010392	Marine	MEALHEYSNDQERLFSLVASLANLLDKDLVVETMQSVLGIEPVHNGDCVIFDDLEIQFGKDDRVKSITRTIDGSREYEI*
Ga0118731_10671136815	3300010392	Marine	MEALHEYSNDQERLFGLVASLANLLDKDLVVETMQSVLGIEPVHDGNRVIFDDLEIQFGQDNRVKSITRTIDGSREYEI*
Ga0118731_1097540445	3300010392	Marine	MEALHEYSNDQERLFGLVANLANLLDKDLVVETMQSVLGIEPVYDGDSVIFDDLAIRFGQDNRVKSIFRTIDGSKEYDT*
Ga0118731_11164293712	3300010392	Marine	LTDQDEKRQWMEALHEYSSDQERLFGLVANLANLLDKDLVVETMQSVLGIEPVHDGDCVIFDDLAIRFGKDGR
Ga0136852_100727942	3300010412	Mangrove Sediment	VTTPEERRQWIEALHAYRDDSERLFTLVASLANLLDRALVIETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSVFRTIDGSAAMD*
Ga0136852_102276083	3300010412	Mangrove Sediment	LFGTVDRRGDAALMTSAEERRSWIEALHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGVTAVHEGDCVIFDDFAIRFGSDDRVKSVFRTIDGPAKGQ*
Ga0136852_104701782	3300010412	Mangrove Sediment	VTSAEDKRRWIEALHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGVTAVHEGDCVIFDDFAIRFGSDDRVKSVFRTIDGSGNGG*
Ga0136852_118217702	3300010412	Mangrove Sediment	AEERRQWIEALHAYRDDSERLFALVASLANLLDKALVIETMESVLGIPAVHDGDCVIFDDMAIRFGSDGRVKSVFRTIDGSGAMG*
Ga0136852_121412582	3300010412	Mangrove Sediment	MTSADDRRRWIEALHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGVTAVHDGDCVIFDDFAIRFGSDDRVKS
Ga0118733_1019367972	3300010430	Marine Sediment	MEALHEYSNDQERLFSLVASLANLLDKDLVVETMQSVLGIEPVHNGDCVIFDDIEIQFGQDDRVKSISRTIDGSKEYEI*
Ga0118733_1063732632	3300010430	Marine Sediment	MEALHEYSNDQEQLFGLVASLANLLDKDLVVETMESVLGIAPVHDGDCVIFDDLAIRFGEDDRVKSVFRTIDGSRNYEI*
Ga0118733_1065025411	3300010430	Marine Sediment	QKRQWMEALHEYSNDQERLFSLVASLANLLDKDLVVETMQSVLGIEPVHNGDCVIFDDLEIQFGKDDRVKSITRTIDGSREYEI*
Ga0139329_1031802	3300010993	Sediment	VTSADDRRRWIEALHAYRDDSERLFALVASLANLLDRTLVVETMESVLGVTAVHEGDCVIFDDFAIRFGSDDRVKSVFRTIDGTGSGG*
Ga0139324_10026573	3300010997	Sediment	VTSADDRRRWIEALHAYRDDSERLFALVASLANLLDRTLVVETMESVLGVTAVHDGDCVIFDDFAIRFGSDDRVRSVFRTIDGSVKGD*
Ga0194017_10236222	3300019696	Sediment	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGITAVHDGDCVIFDDLAIRFGSDD
Ga0193986_10013514	3300019698	Sediment	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGSGS
Ga0193985_10008022	3300019699	Sediment	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGSGTGN
Ga0193985_10082201	3300019699	Sediment	VTTAEERRQWIEALQAYRDDSERLFALVASLANLLDEEMVVETMESVLGIVAVHDNDCVIFDDLAIRFGSDGRVKSVFRIIDGSGNGT
Ga0193985_10110673	3300019699	Sediment	SDEHGRFHLFSTDPVTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRSLVVETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGPGAGN
Ga0193985_10481881	3300019699	Sediment	VTTAEQRRQWMEALHAYRDDSERLFGLVASLANLLDRDLVIETMESVLGITAVHDGDCIIFDDLAIRFGSDGRVKSVFRTIDGSGSDGARANPGDS
Ga0194006_10001117	3300019700	Sediment	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRSLVVETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGPGAGN
Ga0194006_10262811	3300019700	Sediment	VTTAEQRRQWMEALHAYRDDSERLFGLVASLANLLDRDLVIETMESVLGITAVHDGDCIIFDDLAIRFGSDGRVKSVFRTIDGSGSDGARA
Ga0194015_10006915	3300019701	Sediment	VTTAEERRQWIEALQAYRDDSERLFALVASLANLLDEEMVVETMESVLGIVAVHDNDCVIFNDLAIRFGSDGRVKSVFRTIDGSGNGT
Ga0193997_10022202	3300019702	Sediment	VTTAEERRQWIEALQAYRDDSERLFALVASLANLLDEEMVVETMESVLGIAAVHDEDCVIFDDLAIRFGSDGRVKSVFRTIDGSGKGT
Ga0193995_10076691	3300019706	Sediment	RNHLFDPDPVTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGPGAGN
Ga0194016_10399782	3300019708	Sediment	SHENTPCSGPLTSSGNAYPVTTAEERRQWIEALQAYRDDSERLFALVASLANLLDEEMVVETMESVLGIVAVHDNDCVIFNDLAIRFGSDGRVKSVFRTIDGSGNGT
Ga0193967_10088763	3300019709	Sediment	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSVFRTIGG
Ga0194009_10406671	3300019710	Sediment	ALHAYRDDSERLFGLVASLANLLDRDLVIETMESVLGITAVHDGDCIIFDDLAIRFGSDGRVKSVFRTIDGSGSDGARANPGDSNG
Ga0193993_10194532	3300019711	Sediment	EERRQWIEALQAYRDDSERLFALVASLANLLDEEMVVETMESVLGIAAVHDEDCVIFDDLAIRFGSDGRVKSVFRTIDGSGNGT
Ga0193969_10494322	3300019712	Sediment	SAIDNRRWYSHRHEPTQLFDTDPVTTAEQRRQWIEALHAYQDDSERLFGLVASLANLLDRTLVVETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGSGTGN
Ga0193987_10556942	3300019713	Sediment	VTTAEERRQWIEALQAYRDDSERLFALVASLANLLDEEMVVETMESVLGIVAVHDNDCVIFNDLAIRFGSDGRVKS
Ga0193975_10546002	3300019714	Sediment	QWIEALHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGSGTGN
Ga0193977_10021891	3300019719	Sediment	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRSLVVETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSVFRTIG
Ga0193971_10105103	3300019722	Sediment	PLTSSGNAYPVTTAEERRQWIEALQAYRDDSERLFALVASLANLLDEEMVVETMESVLGIVAVHDNDCVIFNDLAIRFGSDGRVKSVFRTIDGSGNGT
Ga0193976_10579451	3300019727	Sediment	VTTAEERRQWIEALQAYRDDSERLFALVASLANLLDEEMVVETMESVLGIAAVHDEDCVIFDDLAIRFGSDGRVK
Ga0193970_10386991	3300019734	Sediment	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRSLVVETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSV
Ga0193990_10008766	3300019735	Sediment	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRSLVVETMESVLGITAVHDGDCVIFDDLAIRFGSDD
Ga0194019_10631881	3300019736	Sediment	QWMEALHAYRDDSERLFGLVASLANLLDRDLVIETMESVLGITAVHDGDCIIFDDLAIRFGSDGRVKSVFRTNDGSGSDGARANPGDSNG
Ga0193992_10463712	3300019743	Sediment	RQVREVTTAEQRRQWMEALHAYRDDSERLVGLVASLANLLDRDLVIETMESVLGITAVHDGDCIIFDDLAIRFGSDGRVKSVFRTIDGSGSDGARANPGDSNG
Ga0193992_10666792	3300019743	Sediment	VTTAEERRQWIEALQAYRDDSERLFALVASLANLLDEEMVVETMESVLGIVAVHDNDCVIFNDLAIRFGSDGRVK
Ga0193998_10140213	3300019744	Sediment	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSVF
Ga0193978_10865641	3300019747	Sediment	SRAHRWRRQVREVTTAEQRRQWMEALHAYRDDSERLFGLVASLANLLDRDLVIETMESVLGITAVHDGDCIIFDDLAIRFGSDGRVKSVFRTIDGSGSDGARANPGDSNG
Ga0210341_12217202	3300021337	Estuarine	VTSAEDKRRWIEALHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGVTAVHQGDCVIFDDFAIRFGSDDRVKSVFRTIDGSGNGG
Ga0193946_10100823	3300021458	Sediment	MEALHAYRDDSERLFGLVASLANLLDRDLVIETMESVLGITAVHDGDCIIFDDLAIRFGSDGRVKSVFRTIDGSGSDGARANPGDSNG
Ga0193947_10122353	3300021465	Sediment	VTTAEERRQWIEALQAYRDDSERLFALVASLANLLDEEMVVETMESVLGIAAVHDEDCVIFDDLAIRFGSDGRVKSVFRTIDGSGK
Ga0193947_10523882	3300021465	Sediment	MTTAEQRRQWMEALHAYRDDSERLFGLVASVANLLDKALVVETMESVLGVTAVHDGDCVIFDDLAIRFGSDDRVRSVFRTIDGTAGDVTQAD
Ga0224503_100003807	3300022201	Sediment	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRKLIIETMESVLGIAAVHDGDCIIFDDLAIRFGSDDRVKSVFRTIDGSGSDGTRAD
Ga0224503_101517472	3300022201	Sediment	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDKNLVIETMESVLGITAVHDGDCIIFDDLAIRFGSDGRVKSVFRTIDGTGGNGTRAD
Ga0224498_101140372	3300022202	Sediment	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRKLIIETMESVLGIAAVHDGDCIIFDDLAIRFGSDDRVKSVFRTIDGLGSDGTRAD
Ga0224496_104077992	3300022204	Sediment	VTSAEDRRGLIEALQAYREDSERMFTLVANLANLLDRPQVVETMESVLGVTAVHDGDCVIFDDLAIRFGSDDRVRSVFRTIDGSAHED
Ga0224499_103195572	3300022206	Sediment	VTTAEERRQWIEALQAYRDDSERLFALVASLANLLDEEMVVETMESVLGIVAVHDNDCVIFNDLAIRFGSDGRVKSV
Ga0224502_1000109211	3300022218	Sediment	MTTAEQRRLWMEALHAYRDDSERLFGLVASVANLLDKALVIETMESVLGVVAVHDGDCVVFDDLAIRFGSDDRVKSVFRIIDGTAGDVTQAD
Ga0224502_100028059	3300022218	Sediment	VTSADDKRRWTEALHAYRDDSERLFGLVASLANLLDRTLVVETIESVLGVTAVHEDDCVIFDDFAIRFGSDDRVKSVFRTIDDSDNGN
Ga0224502_101271212	3300022218	Sediment	MTSADDRRRWIEALHAYRDDSERLFALVASLANLLDRTLVVETMESVLGVTAVHDGDCVIFDDFAIRFGSDDRVKSVFRTIDGSVKGD
Ga0224502_101324222	3300022218	Sediment	VTSAEQRLQWIEALHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGITAEHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGPGSGN
Ga0224502_101845381	3300022218	Sediment	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDKNLVIETMESVLGITAVHDGDCIIFDDLAIRFGSDGRVKSVFRTIDGTGGDGTRVD
Ga0224513_100924403	3300022220	Sediment	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDKNLVIETMESVLGITAVHDGDCIIFDDLAIRFGSDGRVKSVFRTIDGSGNGT
Ga0224504_100252901	3300022308	Sediment	VTTAEERRQWIEALQAYRDDSERLFALVASLANLLDEEMVVETMESVLGIVAVHDNDCVIFNDLAIRFGSDGRVKSVF
Ga0224504_100950572	3300022308	Sediment	VTSAEQRLQWIEALHAYRDDSERLFGLVANLANLLDHTLVVETMESVLGITAEHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGPGSGN
Ga0210318_11323351	3300022389	Estuarine	VTTAEERRQWIEALHAYRDDSERLFALVASLANLLDEEMVVETMESVLGIVAVHDNDCVIFDDLAIRFGSDGRVKSVFRTIDGSGNGT
Ga0224508_103344272	3300022413	Sediment	LTDQDQKRQWMEALHEYSNDQERLFGLVASLANLLDKDLVVETMQSILGIEPVHDGDSVKFDDLEIQFGQDDRVKSITRTIDGSREYEI
(restricted) Ga0255051_102770381	3300024057	Seawater	DQDQKCQWMEALHEYSNDQERLFSLVASLANLLDKDLVVETMQSVLGIEPVHDGDCVRFDDLEIQFGQDDRVKSITRTIDGSREYEI
(restricted) Ga0255040_100194973	3300024059	Seawater	MDQDEKRQWMEALHEYSNDQERLFSLVASLANLLDKDLVVETMQSVLGIEPVHEGDCVIFDDLEIQFGQDNRVKSITRTIDGSKKYEI
(restricted) Ga0255049_100367561	3300024517	Seawater	LALTDQDQKCQWMEALHEYSNDQERLFSLVASLANLLDKDLVVETMQSVLGIEPVHDGDCVRFDDLEIQFGQDDRVKSITRTIDGSREYEI
(restricted) Ga0255046_105461742	3300024519	Seawater	GHAALMDQDEKRQWMEALHEYSNDQERLFSLVASLANLLDKDLVVETMQSVLGIEPVHEGDCVIFDDLEIQFGQDNRVKSITRTIDGSKKYEI
Ga0210109_10593462	3300025539	Natural And Restored Wetlands	DVAGPRRNAAPMTSADDRRRWIEALHAYRDDSERLFALVASLANLLDRTLVVETMESVLGVTAVHDGDCVIFDDFAIRFGSDDRVKSVFRTIDGSVKGD
Ga0210119_10071953	3300025561	Natural And Restored Wetlands	VTSAEDRRRWTEALHAYRDDSERLFALVASLANLLDRTLVVETMESVLGVTAVHDGDCVIFDDFAIRFGSDDRVKSVFRTIDGSVKGD
Ga0210119_10139161	3300025561	Natural And Restored Wetlands	VTTAEERRQWIEALQAYRDDSERLFALVASLANLLDEEMVVETMESVLGVVAVHDGDCVVFDDLAIRFGSDDRVKSVFRII
Ga0210140_10489892	3300025566	Natural And Restored Wetlands	VTSADDRRRWIEALHAYRDDSERLFALVASLASLLDRTLVVETMVSVLGVTAVHDGDCVIFDDFAIRFGSDDRVRSVFRTIDGSVKGD
Ga0210118_10231961	3300025974	Natural And Restored Wetlands	CSGPLTSSGNASPVTTAEERRQWIEALQAYRDDSERLFALVASLANLLDEEMVVETMESVLGIVAVHDNDCVIFNDLAIRFGSDGRVKSVFRTIDGSGNGT
Ga0210079_10746362	3300025995	Natural And Restored Wetlands	VTSADDKRRWTEALHAYRDDSERLFGLVASLANLLDRTLVVETIESVLGVTAVHEDDCVIFDDFAIRFGSDDRVKSVFRTIDGTGSGG
Ga0209927_10356041	3300026106	Soil	VTTAEQRRQWIEALHAYRDDSERLFGLVASLANLLDRKLIIETMESVLGIAAVHDGDCIIFDDLAIRFGSDDRVKSVFRTIDGL
Ga0209273_1000058215	3300027790	Marine Sediment	LTDQDQKRQWMEALHEYSNDQERLFGLVASLANLLDKDLVVETMQSVLGIEPVHDGNRVIFDDLEIQFGQDNRVKSITRTIDGSREYEI
Ga0209273_100308163	3300027790	Marine Sediment	LTDQDEKRQWMEALHEYSSDQERLFGLVANLANLLDKDLVVETMQSVLGIEPVHDGDCVIFDDLAIRFGKDGRVKSIFRTIDGSKEYET
Ga0209273_100489252	3300027790	Marine Sediment	MEALHAYSDDQDRLFGLVASLANLLDKDLVVETMQSVLGIEPVHDGDCVIFDDFAIQFGQDNRVKSVYRTIDGSKEFDT
Ga0209742_1000082316	3300027814	Marine Sediment	VTTAEERRQWIEALQAYREDSERLFALVASLANLLDEEMVVETMESVLGIAAVHDEDCVIFDDLAIRFGSDGRVKSVFRTIDGSGKGT
Ga0209742_100015356	3300027814	Marine Sediment	VTTAEQRRQWIEALHAYQDDSDRLFGLVASLANLLDRALVIETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGSGS
Ga0209742_100044228	3300027814	Marine Sediment	VTTAEERRQWIEALHAYRDDSERLFGLVASLANLLDRNLVIETMESVLGITAVHDGDCIIFDDLAIRFGSDGRVKSVFRTIDGSAGDMARPD
Ga0209578_103194401	3300027820	Marine Sediment	EKRQWMEALHEYSSDQERLFGLVANLANLLDKDLVVETMQSVLGIEPVHDGDCVIFDDLAIRFGKDGRVKSIFRTIDGSKEYET
(restricted) Ga0255054_100000036	3300027856	Seawater	MISSEQRRMWIEALNAYTTDQDRLFALVASLANLLDRELVVETMESVLGIDAVHEDDCVIFDDLAIRFGSDNRVKSIFRTIDGSTKPR
(restricted) Ga0255054_100018389	3300027856	Seawater	LTDQDQKRQWMEALHEYSNDQERLFSLVASLANLLDKDLVVETMQSVLGIEPVHDGDCVRFDDLEIQFGQDDRVKSITRTIDGSREYEI
(restricted) Ga0255054_100240904	3300027856	Seawater	LTDLDEKRQWMEALHEYSNDQERLFGLVASLANLLDKDLVVETMQSVLGIEPVYDGDSVIFDDLAIRFGQDNRVKSVFRTIDGSREYET
(restricted) Ga0255054_103609142	3300027856	Seawater	MDQDEKRQWMEALHEYSNDQERLFSLVASLANLLDKDLVVETMQSVLGIEPVHKDDCVIFDDLEIRFGQDNRVKSITRTIDGSKEYEI
Ga0265309_102116112	3300028599	Sediment	MEALHEYSNDQERLFGLVASLANLLDKDLVVETMQSVLGIEAIHDGDCVIFDDFAIRFGEDGRVRSVFRTIDGSRNYEA
Ga0265303_100470403	3300028600	Sediment	VTDLDQRRQWMEALHEYSNDQERLFGLVASLANLLDKDLVVETMQSVLGIEAIHDGDCVIFDDFAIRFGEDDRVRSVFRTIDGSRNYEA
Ga0316187_100821293	3300032231	Worm Burrow	VTTAEQRRQWIEGLHAYRDDSERLFGLVASLANLLDRTLVVETMESVLGITAVHDGDCVIFDDLAIRFGSDDRVKSVFRTIGGSGTGN
Ga0316196_102196902	3300032252	Sediment	VTTAEERRQWIEALQAYRDDSERLFALVASLANLLDEEMVVETMESVLGIVAVHDNDCVIFDDLAIRFGSDGRVKSVFRTIDGSGNGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters