Metagenome / Metatranscriptome Family F036104

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F036104
Family Type	Metagenome / Metatranscriptome
Number of Sequences	170
Average Sequence Length	35 residues
Representative Sequence	MGQDGIPLSIGIIIAAAILGATFIAGMVLLAILFA
Number of Associated Samples	91
Number of Associated Scaffolds	170

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.12 %
% of genes near scaffold ends (potentially truncated)	4.71 %
% of genes from short scaffolds (< 2000 bps)	64.71 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.412 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface (23.529 % of family members)
Environment Ontology (ENVO)	Unclassified (27.059 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (28.235 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.86% β-sheet: 0.00% Coil/Unstructured: 57.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 170 Family Scaffolds
PF00137	ATP-synt_C	33.53
PF00430	ATP-synt_B	21.18
PF00213	OSCP	11.18
PF00119	ATP-synt_A	11.18
PF02577	BFN_dom	3.53
PF09527	ATPase_gene1	2.94
PF02874	ATP-synt_ab_N	2.94
PF00231	ATP-synt	1.76
PF02896	PEP-utilizers_C	1.18
PF02823	ATP-synt_DE_N	1.18
PF13247	Fer4_11	1.18
PF13286	HD_assoc	1.18
PF05239	PRC	1.18
PF13662	Toprim_4	0.59
PF16177	ACAS_N	0.59
PF01326	PPDK_N	0.59
PF00027	cNMP_binding	0.59
PF00886	Ribosomal_S16	0.59
PF04023	FeoA	0.59
PF00076	RRM_1	0.59
PF12675	DUF3795	0.59
PF13404	HTH_AsnC-type	0.59

COG ID	Name	Functional Category	% Frequency in 170 Family Scaffolds
COG0636	FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K	Energy production and conversion [C]	33.53
COG0711	FoF1-type ATP synthase, membrane subunit b or b'	Energy production and conversion [C]	21.18
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	11.18
COG0712	FoF1-type ATP synthase, delta subunit	Energy production and conversion [C]	11.18
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	3.53
COG0224	FoF1-type ATP synthase, gamma subunit	Energy production and conversion [C]	1.76
COG0355	FoF1-type ATP synthase, epsilon subunit	Energy production and conversion [C]	1.18
COG0228	Ribosomal protein S16	Translation, ribosomal structure and biogenesis [J]	0.59
COG0574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	Carbohydrate transport and metabolism [G]	0.59
COG1918	Fe2+ transport protein FeoA	Inorganic ion transport and metabolism [P]	0.59

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.41 %
Unclassified	root	N/A	10.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.41 %
Unclassified	root	N/A	10.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.41 %
Unclassified	root	N/A	10.59 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.59 %
Unclassified	root	N/A	10.59 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	80.59 %
Unclassified	root	N/A	10.59 %

Name	Rank	Taxonomy	Distribution
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	57.65 %
Unclassified	root	N/A	10.59 %

Name	Rank	Taxonomy	Distribution
Dehalococcoidales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales	18.82 %
Unclassified	root	N/A	10.59 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	8.24 %
Dehalogenimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas	1.18 %

Name	Rank	Taxonomy	Distribution
Dehalococcoidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae	18.82 %
Unclassified	root	N/A	10.59 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	8.24 %
Dehalogenimonas formicexedens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas → Dehalogenimonas formicexedens	0.59 %

Name	Rank	Taxonomy	Distribution
Dehalococcoides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides	18.82 %
Unclassified	root	N/A	10.59 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	8.24 %
Dehalogenimonas formicexedens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas → Dehalogenimonas formicexedens	0.59 %

Name	Rank	Taxonomy	Distribution
Dehalococcoides mccartyi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	17.65 %
Unclassified	root	N/A	10.59 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	8.24 %
Dehalogenimonas formicexedens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas → Dehalogenimonas formicexedens	0.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001687\|WOR8_10011666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	8836	Open in IMG/M
3300001751\|JGI2172J19969_10034858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1774	Open in IMG/M
3300001751\|JGI2172J19969_10053421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1318	Open in IMG/M
3300001782\|WOR52_10024713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	6281	Open in IMG/M
3300002052\|SMTZ1_10009759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	13951	Open in IMG/M
3300002053\|SMTZ23_10034087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	6990	Open in IMG/M
3300002481\|JGI24020J35080_1016178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1595	Open in IMG/M
3300005645\|Ga0077109_1000701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	18992	Open in IMG/M
3300005645\|Ga0077109_1063347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1140	Open in IMG/M
3300005782\|Ga0079367_1039350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	2071	Open in IMG/M
3300005822\|Ga0078744_1032674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1158	Open in IMG/M
3300007351\|Ga0104751_1223779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	649	Open in IMG/M
3300008516\|Ga0111033_1100528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	5330	Open in IMG/M
3300008516\|Ga0111033_1233029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	9485	Open in IMG/M
3300009009\|Ga0105105_10324023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	839	Open in IMG/M
3300009034\|Ga0115863_1004915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	20372	Open in IMG/M
3300009034\|Ga0115863_1032709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	6895	Open in IMG/M
3300009034\|Ga0115863_1034636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	6664	Open in IMG/M
3300009034\|Ga0115863_1037638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	6343	Open in IMG/M
3300009034\|Ga0115863_1535519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1335	Open in IMG/M
3300009034\|Ga0115863_1609344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1235	Open in IMG/M
3300009034\|Ga0115863_1641457	Not Available	1197	Open in IMG/M
3300009034\|Ga0115863_1683875	Not Available	1152	Open in IMG/M
3300009127\|Ga0118724_1000719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	47445	Open in IMG/M
3300009127\|Ga0118724_1026412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	5144	Open in IMG/M
3300009127\|Ga0118724_1086875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1919	Open in IMG/M
3300009127\|Ga0118724_1133325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1352	Open in IMG/M
3300009127\|Ga0118724_1278297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	708	Open in IMG/M
3300009127\|Ga0118724_1294294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	641	Open in IMG/M
3300009136\|Ga0118735_10001869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	7349	Open in IMG/M
3300009136\|Ga0118735_10167589	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300009136\|Ga0118735_10338647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	524	Open in IMG/M
3300009150\|Ga0114921_10003476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	7740	Open in IMG/M
3300009150\|Ga0114921_10004610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	6914	Open in IMG/M
3300009150\|Ga0114921_10022623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	3645	Open in IMG/M
3300009150\|Ga0114921_10041137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2841	Open in IMG/M
3300009150\|Ga0114921_10097933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1943	Open in IMG/M
3300009150\|Ga0114921_10204238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1380	Open in IMG/M
3300009150\|Ga0114921_10216041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1344	Open in IMG/M
3300009150\|Ga0114921_10413914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	977	Open in IMG/M
3300009150\|Ga0114921_10423522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	966	Open in IMG/M
3300009150\|Ga0114921_10970920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	633	Open in IMG/M
3300009311\|Ga0117906_1105062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	978	Open in IMG/M
3300009488\|Ga0114925_10057538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	2364	Open in IMG/M
3300009488\|Ga0114925_11155645	Not Available	567	Open in IMG/M
3300009499\|Ga0114930_10034088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	3296	Open in IMG/M
3300009528\|Ga0114920_10050140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2522	Open in IMG/M
3300009528\|Ga0114920_10081904	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300009528\|Ga0114920_10139244	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300009528\|Ga0114920_10372515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	968	Open in IMG/M
3300009528\|Ga0114920_10644881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	724	Open in IMG/M
3300009528\|Ga0114920_10814487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	639	Open in IMG/M
3300009528\|Ga0114920_10879262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	614	Open in IMG/M
3300009528\|Ga0114920_11056671	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300009529\|Ga0114919_10044753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	3294	Open in IMG/M
3300009529\|Ga0114919_10212056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1377	Open in IMG/M
3300009529\|Ga0114919_10266621	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300009538\|Ga0129287_10501043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	546	Open in IMG/M
3300009538\|Ga0129287_10527572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	531	Open in IMG/M
3300009874\|Ga0131789_10057347	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300010284\|Ga0129301_1000838	All Organisms → cellular organisms → Bacteria	16205	Open in IMG/M
3300010324\|Ga0129297_10182518	Not Available	968	Open in IMG/M
3300010324\|Ga0129297_10541929	Not Available	508	Open in IMG/M
3300010328\|Ga0129298_10036591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	2345	Open in IMG/M
3300010413\|Ga0136851_10185457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2153	Open in IMG/M
3300010995\|Ga0139323_146515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	711	Open in IMG/M
3300010996\|Ga0139308_116424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1010	Open in IMG/M
3300011340\|Ga0151652_11218612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1052	Open in IMG/M
3300011340\|Ga0151652_12856919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1031	Open in IMG/M
3300012931\|Ga0153915_13184858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	533	Open in IMG/M
3300012964\|Ga0153916_11253709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	819	Open in IMG/M
3300012964\|Ga0153916_11668471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	711	Open in IMG/M
3300012964\|Ga0153916_11956716	Not Available	657	Open in IMG/M
3300013086\|Ga0163202_1004132	All Organisms → cellular organisms → Bacteria	2732	Open in IMG/M
3300013089\|Ga0163203_1001920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	5856	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10072565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	2232	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10531855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	702	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10693407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	598	Open in IMG/M
3300015370\|Ga0180009_10171667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1012	Open in IMG/M
3300015370\|Ga0180009_10323814	Not Available	634	Open in IMG/M
3300017963\|Ga0180437_10007831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	13782	Open in IMG/M
3300017963\|Ga0180437_10453298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	951	Open in IMG/M
3300017963\|Ga0180437_10732927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	715	Open in IMG/M
3300017963\|Ga0180437_10746887	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300017971\|Ga0180438_10413014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1020	Open in IMG/M
3300017989\|Ga0180432_10224073	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300020074\|Ga0194113_10113435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	2337	Open in IMG/M
3300020083\|Ga0194111_10898993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	526	Open in IMG/M
3300020814\|Ga0214088_1388637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1865	Open in IMG/M
3300020814\|Ga0214088_1431030	Not Available	862	Open in IMG/M
3300021603\|Ga0226659_10327629	Not Available	682	Open in IMG/M
3300022221\|Ga0224506_10028855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	2906	Open in IMG/M
3300022221\|Ga0224506_10381841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	623	Open in IMG/M
3300022223\|Ga0224501_10148247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1348	Open in IMG/M
3300022551\|Ga0212089_10235488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	885	Open in IMG/M
3300022553\|Ga0212124_10002096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	16318	Open in IMG/M
3300022553\|Ga0212124_10030218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	3359	Open in IMG/M
3300022553\|Ga0212124_10049544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2489	Open in IMG/M
3300024263\|Ga0209978_10001511	All Organisms → cellular organisms → Bacteria	9941	Open in IMG/M
3300024263\|Ga0209978_10003318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	7232	Open in IMG/M
3300024263\|Ga0209978_10004026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	6661	Open in IMG/M
3300024263\|Ga0209978_10015631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	3670	Open in IMG/M
3300024263\|Ga0209978_10017234	All Organisms → cellular organisms → Bacteria	3502	Open in IMG/M
3300024263\|Ga0209978_10328733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	757	Open in IMG/M
3300024263\|Ga0209978_10459021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	614	Open in IMG/M
3300024353\|Ga0209979_1079033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1422	Open in IMG/M
3300024353\|Ga0209979_1091579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1273	Open in IMG/M
3300024353\|Ga0209979_1170246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	793	Open in IMG/M
3300024429\|Ga0209991_10130200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1255	Open in IMG/M
3300024429\|Ga0209991_10242760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	878	Open in IMG/M
3300024429\|Ga0209991_10481325	Not Available	567	Open in IMG/M
3300024433\|Ga0209986_10000066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	87830	Open in IMG/M
3300024433\|Ga0209986_10157769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1168	Open in IMG/M
3300024433\|Ga0209986_10541226	Not Available	506	Open in IMG/M
3300025309\|Ga0209212_1210464	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300025313\|Ga0209431_11253585	Not Available	503	Open in IMG/M
3300025326\|Ga0209342_10355235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1256	Open in IMG/M
3300025824\|Ga0208325_1153656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	522	Open in IMG/M
3300027051\|Ga0209269_1000098	All Organisms → cellular organisms → Bacteria	146121	Open in IMG/M
3300027323\|Ga0209426_1003248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides	6425	Open in IMG/M
3300027690\|Ga0209164_1169289	Not Available	763	Open in IMG/M
3300027740\|Ga0214474_1245383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	644	Open in IMG/M
3300027888\|Ga0209635_10150516	Not Available	1905	Open in IMG/M
3300027888\|Ga0209635_10163010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides	1822	Open in IMG/M
3300027888\|Ga0209635_10865132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	641	Open in IMG/M
3300027893\|Ga0209636_10299136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1418	Open in IMG/M
3300027893\|Ga0209636_10426930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1119	Open in IMG/M
3300027893\|Ga0209636_11229354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	525	Open in IMG/M
3300027893\|Ga0209636_11251051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	518	Open in IMG/M
3300027901\|Ga0209427_10006569	All Organisms → cellular organisms → Bacteria	13250	Open in IMG/M
3300027917\|Ga0209536_101741768	Not Available	753	Open in IMG/M
3300028156\|Ga0268281_1111682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	617	Open in IMG/M
3300028161\|Ga0265596_1030034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1644	Open in IMG/M
3300029693\|Ga0257137_1039189	Not Available	796	Open in IMG/M
3300029799\|Ga0311022_12665047	Not Available	1093	Open in IMG/M
3300030714\|Ga0307925_130762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	579	Open in IMG/M
3300031257\|Ga0315555_1014376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas → Dehalogenimonas formicexedens	4796	Open in IMG/M
3300031257\|Ga0315555_1108362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1258	Open in IMG/M
3300031365\|Ga0307443_1009624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	4274	Open in IMG/M
3300031539\|Ga0307380_10204971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1901	Open in IMG/M
3300031551\|Ga0315548_1045271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2094	Open in IMG/M
3300031566\|Ga0307378_10602213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	964	Open in IMG/M
3300031566\|Ga0307378_11083061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas	645	Open in IMG/M
(restricted) 3300031587\|Ga0315308_1080074	Not Available	1382	Open in IMG/M
(restricted) 3300031593\|Ga0315307_1025137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2406	Open in IMG/M
(restricted) 3300031604\|Ga0315309_1089649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1335	Open in IMG/M
3300031624\|Ga0315545_1071669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1694	Open in IMG/M
3300031707\|Ga0315291_11096292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	661	Open in IMG/M
3300031862\|Ga0315280_10004985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	19256	Open in IMG/M
3300031862\|Ga0315280_10010283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	11773	Open in IMG/M
3300031862\|Ga0315280_10014316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	9272	Open in IMG/M
3300031862\|Ga0315280_10028760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	5511	Open in IMG/M
3300031862\|Ga0315280_10211489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1086	Open in IMG/M
3300031862\|Ga0315280_10408370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	623	Open in IMG/M
(restricted) 3300031876\|Ga0315310_10246575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	776	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1075575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1500	Open in IMG/M
(restricted) 3300031898\|Ga0315312_1020784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	3033	Open in IMG/M
3300031999\|Ga0315274_10004942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	19558	Open in IMG/M
3300031999\|Ga0315274_10332787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1795	Open in IMG/M
3300032020\|Ga0315296_10000215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	54588	Open in IMG/M
3300032020\|Ga0315296_10002711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	14968	Open in IMG/M
3300032020\|Ga0315296_10013991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	5938	Open in IMG/M
3300032020\|Ga0315296_10014186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	5890	Open in IMG/M
3300032020\|Ga0315296_10171042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1322	Open in IMG/M
3300032046\|Ga0315289_10352918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1490	Open in IMG/M
3300032118\|Ga0315277_11276255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	646	Open in IMG/M
3300033486\|Ga0316624_10427705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1115	Open in IMG/M
3300033487\|Ga0316630_10479035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1014	Open in IMG/M
3300033513\|Ga0316628_101081949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1066	Open in IMG/M
3300033991\|Ga0334965_0005086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	8171	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.47%
Engineered	Engineered	3.53%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	90.00%
Terrestrial	Environmental → Terrestrial	6.47%
Bioreactor	Engineered → Bioreactor	2.35%
Lab Enrichment	Engineered → Lab Enrichment	1.18%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	50.00%
Freshwater	Environmental → Aquatic → Freshwater	29.41%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	5.88%
Soil	Environmental → Terrestrial → Soil	5.88%
Sediment	Environmental → Aquatic → Sediment	2.94%
Anaerobic	Engineered → Bioreactor → Anaerobic	2.35%
Unclassified	Environmental → Aquatic → Unclassified	1.18%
Defined Media	Engineered → Lab Enrichment → Defined Media	1.18%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.59%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.59%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	31.76%
Lake	Environmental → Aquatic → Freshwater → Lake	22.35%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	8.82%
Coastal	Environmental → Aquatic → Marine → Coastal	6.47%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.71%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	3.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.94%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	2.35%
Clay	Environmental → Terrestrial → Soil → Clay	2.35%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	2.35%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.76%
Sediment	Environmental → Aquatic → Marine → Sediment	1.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.76%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.18%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	1.18%
Loam	Environmental → Terrestrial → Soil → Loam	1.18%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	1.18%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.59%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.59%
Aquifer	Environmental → Terrestrial → Deep Subsurface → Aquifer	0.59%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	31.18%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	17.65%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	5.88%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	4.71%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.12%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	3.53%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	2.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.35%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.35%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	2.35%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	2.35%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	2.35%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	2.35%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.76%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	1.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.76%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.18%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	1.18%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.18%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	1.18%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.59%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	0.59%
Microbial Mats	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Microbial Mats	0.59%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.59%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Aquifer → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	23.53%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	15.29%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	7.65%
Sediment, Intertidal	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Sediment, Intertidal	4.71%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	4.12%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.53%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	3.53%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	2.35%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.35%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	2.35%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	2.35%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	2.35%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	1.76%
Marine Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Sediment	1.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.76%
Granular Sludge	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Granular Sludge	1.76%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.18%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	1.18%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	1.18%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.18%
Marine Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Sediment	1.18%
Deep Oceanic, Basalt-Hosted Subsurface Hydrothermal Fluid	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Oceanic, Basalt-Hosted Subsurface Hydrothermal Fluid	1.18%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	1.18%
Brackish Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Brackish Water	1.18%
Beach Aquifer Porewater	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater	1.18%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.18%
Enrichment Culture	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture	1.18%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.59%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.59%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.59%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.59%
Hot Spring Microbial Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Microbial Mats → Hot Spring Microbial Mat	0.59%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.59%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.59%
Deep Subsurface Aquifer	Environmental → Terrestrial → Deep Subsurface → Aquifer → Unclassified → Deep Subsurface Aquifer	0.59%
Anaerobic Digester Digestate	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester Digestate	0.59%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001687	Deep Marine Sediments WOR-3-8_10	Environmental	Open in IMG/M
3300001751	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32	Environmental	Open in IMG/M
3300001782	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR_deep_samples	Environmental	Open in IMG/M
3300002052	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30	Environmental	Open in IMG/M
3300002053	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR_SMTZ	Environmental	Open in IMG/M
3300002481	Deep oceanic, basalt-hosted subsurface ecosystem from Juan de Fuca Ridge flank, Pacific Ocean, CORK Borehole 1362A_J2.573	Environmental	Open in IMG/M
3300005645	Brackish water microbial communities from Lake Sakinaw in Canada: eDNA_2 (120m)	Environmental	Open in IMG/M
3300005782	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf, PM3	Environmental	Open in IMG/M
3300005822	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 25 cmbsf, MM1	Environmental	Open in IMG/M
3300007351	Combined Assembly of Gp0115775, Gp0115815	Environmental	Open in IMG/M
3300008516	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf. Combined Assembly of MM3PM3	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009034	Intertidal mud flat sediment archaeal communities from Garolim Bay, Chungcheongnam-do, Korea	Environmental	Open in IMG/M
3300009127	Combined Assembly of Gp0137036, Gp0137038	Environmental	Open in IMG/M
3300009136	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 82 cmbsf	Environmental	Open in IMG/M
3300009150	Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaG	Environmental	Open in IMG/M
3300009311	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 900m, 2.7-0.2um, replicate b	Environmental	Open in IMG/M
3300009488	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG	Environmental	Open in IMG/M
3300009499	Deep subsurface microbial communities from Anholt, Denmark to uncover new lineages of life (NeLLi) - Anholt_01485 metaG	Environmental	Open in IMG/M
3300009528	Deep subsurface microbial communities from South Pacific Ocean to uncover new lineages of life (NeLLi) - Chile_00310 metaG	Environmental	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300009538	Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - H-2W	Environmental	Open in IMG/M
3300009874	Sea floor sediment microbial communities from Gulf of Mexico Methane Seep - MPC1T	Environmental	Open in IMG/M
3300010284	Hot spring microbial mat communities from California, USA to study Microbial Dark Matter (Phase II) - Cone Pool mat layer H metaG	Environmental	Open in IMG/M
3300010324	Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I18A1 metaG	Environmental	Open in IMG/M
3300010328	Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I19B2 metaG	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300010995	ECM14MPS05_Aassembled -- Sediment microbial communities from coastal marsh in Port Sulphur, LA sequencing method A (2X250bp)	Environmental	Open in IMG/M
3300010996	ELM11109_Aassembled -- Sediment microbial communities from coastal marsh in Port Sulphur, LA sequencing method A (2X250bp)	Environmental	Open in IMG/M
3300011340	Combined Assembly of Wetland Metatranscriptomes	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013086	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_300m	Environmental	Open in IMG/M
3300013089	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_330m	Environmental	Open in IMG/M
3300013127 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cm	Environmental	Open in IMG/M
3300013128 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 69cm	Environmental	Open in IMG/M
3300015370	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - OS_PC_MetaG	Environmental	Open in IMG/M
3300017963	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaG	Environmental	Open in IMG/M
3300017971	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaG	Environmental	Open in IMG/M
3300017989	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_2 metaG	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020083	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300m	Environmental	Open in IMG/M
3300020814	Granular sludge microbial community from anaerobic digester, University of Toronto, Ontario, Canada - UASBVu03_granules megahit	Engineered	Open in IMG/M
3300021603	Granular sludge microbial community from anaerobic digester, University of Toronto, Ontario, Canada - UASBVu03_granules spades	Engineered	Open in IMG/M
3300022221	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_8_1	Environmental	Open in IMG/M
3300022223	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_8_1	Environmental	Open in IMG/M
3300022551	Boni_combined assembly	Environmental	Open in IMG/M
3300022553	Powell_combined assembly	Environmental	Open in IMG/M
3300024263	Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaG (SPAdes)	Environmental	Open in IMG/M
3300024353	Deep subsurface microbial communities from Anholt, Denmark to uncover new lineages of life (NeLLi) - Anholt_01485 metaG (SPAdes)	Environmental	Open in IMG/M
3300024429	Deep subsurface microbial communities from South Pacific Ocean to uncover new lineages of life (NeLLi) - Chile_00310 metaG (SPAdes)	Environmental	Open in IMG/M
3300024433	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes)	Environmental	Open in IMG/M
3300025309	Soil microbial communities from Rifle, Colorado, USA - Groundwater C2	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025824	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_330m (SPAdes)	Environmental	Open in IMG/M
3300027051	Enrichment culture microbial communities from Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKM (Arthur Kill Methanogenic) MetaG (SPAdes)	Engineered	Open in IMG/M
3300027323	Deep oceanic, basalt-hosted subsurface ecosystem from Juan de Fuca Ridge flank, Pacific Ocean, CORK Borehole 1362B_J2.571 (SPAdes)	Environmental	Open in IMG/M
3300027690	Enrichment culture microbial communities from rom New York Harbor, USA that are MTBE-degrading - MTBE-NYH (New York Harbor Sulfidogenic) MetaG (SPAdes)	Engineered	Open in IMG/M
3300027740	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214 HiSeq	Environmental	Open in IMG/M
3300027888	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32 (SPAdes)	Environmental	Open in IMG/M
3300027893	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54 (SPAdes)	Environmental	Open in IMG/M
3300027901	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30 (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300028156	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2011_5_24_50m	Environmental	Open in IMG/M
3300028161	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2013_06_06_60m	Environmental	Open in IMG/M
3300029693	Metatranscriptome of saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2010_1_5_50m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029799	Metagenomes from anaerobic digester of solid waste, Toronto, Canda. Combined Assembly of Gp0238878, Gp0238879, Gp0242100, Gp0242119	Engineered	Open in IMG/M
3300030714	Metatranscriptome of soil microbial communities from Risofladan, Vaasa, Finland - UN-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031257	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-80	Environmental	Open in IMG/M
3300031365	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1601-220	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031551	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-110	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031587 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP3	Environmental	Open in IMG/M
3300031593 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP2	Environmental	Open in IMG/M
3300031604 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP4	Environmental	Open in IMG/M
3300031624	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-10	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031862	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40	Environmental	Open in IMG/M
3300031876 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP5	Environmental	Open in IMG/M
3300031877 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP9	Environmental	Open in IMG/M
3300031898 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP7	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032020	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_18	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033991	Sediment microbial communities from Lake Vrana, Zadar, Croatia - 4 bact	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
WOR8_1001166610	3300001687	Marine Sediment	MGQDGIPISIGIIIAAAILGACFVLGMVLTAILFA*
JGI2172J19969_100348583	3300001751	Marine Sediment	MGQDGIPISIGIIIAAAILGACFVLGMVLMAILFA*
JGI2172J19969_100534213	3300001751	Marine Sediment	MEQQGIPLSISIIIAAAVLGATFIIGMVLFAVLSAM*
WOR52_100247134	3300001782	Marine Sediment	MGDNGIPLSIGIIIAAAVLGAAFIAGMVLLAILFA*
SMTZ1_1000975915	3300002052	Marine Sediment	MGEEGIPLSISIIISASVLGATFVSGMVLLAILFG*
SMTZ23_100340878	3300002053	Marine Sediment	MGDNGIPLSIGIIIAAAVLGAAFIAGMVLLAVLFA*
JGI24020J35080_10161784	3300002481	Deep Oceanic, Basalt-Hosted Subsurface Hydrothermal Fluid	MGQDGIPVSIGMIIAAAILGACFVLGMVLMAVLFASGGNLG
Ga0077109_10007019	3300005645	Brackish Water	MGQEGIPLSIGIIIAAAILGATFIAGMVLLAILFV*
Ga0077109_10633472	3300005645	Brackish Water	MGQDGFPLAIGIIIAAAVLGAAFIAGLVLLAVLAI*
Ga0079367_10393503	3300005782	Marine Sediment	MGQDGIPLSIGIIIAAAILGATFIAGMVLLAILFV*
Ga0078744_10326743	3300005822	Marine Sediment	MGQDGIPISIGIIIAAAILGACFVLGMVLMAVLSA*
Ga0104751_12237791	3300007351	Deep Subsurface Aquifer	MQDGIPLSLGIIIAAAILGTTFVLGMVLLAILGA*
Ga0111033_11005284	3300008516	Marine Sediment	MGQEGIPLSIGIIIAAAILGVAFVAGMVLSAVLAAI*
Ga0111033_12330295	3300008516	Marine Sediment	LKEVIMGENGIPLSIGIIIAAAVLGAAFIAGMVLLAVLFA*
Ga0105105_103240233	3300009009	Freshwater Sediment	MGENGLPLSVGIIIAAAVLGVLLIAGLVLLAILGA*
Ga0115863_100491512	3300009034	Sediment, Intertidal	MGQDGIPLSIGIIIAAGILGATFIAGMVLLAILLSVV*
Ga0115863_10327097	3300009034	Sediment, Intertidal	MQQQQDGIPLSIGIIIAAVVLGAAFIAGMVLLAILLV*
Ga0115863_10346367	3300009034	Sediment, Intertidal	MGQDEIPISIGIIIAAAILGATFILGMVLMAVLSA*
Ga0115863_10376382	3300009034	Sediment, Intertidal	MGQDGIPLSIGIIVAAAILGATFVAGMVLVAVLSI*
Ga0115863_15355193	3300009034	Sediment, Intertidal	MGQEGIPLSIGIIIAAGILGATFIAGMVLLAILFST*
Ga0115863_16093441	3300009034	Sediment, Intertidal	MEQDGIPLSIGIIIAAAVLGATFIAGMVLFAVLSAM*
Ga0115863_16414573	3300009034	Sediment, Intertidal	MGQDGIPLSIGIIIAAAILGATFIAGMVLLAILFA*
Ga0115863_16838752	3300009034	Sediment, Intertidal	MGQDGIPISIGIIIAAAILGATFIAGVVLMAILFV*
Ga0118724_100071931	3300009127	Marine	MGQDGIPLSIGVIIAAAILGATFIMGMVLSAVLGA*
Ga0118724_10264126	3300009127	Marine	MGQDGIPLSIGIIIAAAILGATFIVGMVLLAVLIA*
Ga0118724_10868753	3300009127	Marine	MGQDGIPLSIGIIIAAAILGATFIAGMVLMAVLSNT*
Ga0118724_11333253	3300009127	Marine	MGQDGIPLSIGIIIAAAVLGATFIAGMVLLAVLSA*
Ga0118724_12782972	3300009127	Marine	MGQDGDGIPLSIGIIIAAAILGATFIVGMVLMAVLSV*
Ga0118724_12942942	3300009127	Marine	MEQQGIPLSIGIIIAAAVLGATFIAGVVLMAILSV*
Ga0118735_100018699	3300009136	Marine Sediment	MQQQQNGIPLSIGIIIAAAILGATFISGMVLLAILLAW*
Ga0118735_101675892	3300009136	Marine Sediment	MEQNGIPLSLGIIIAAAILGATFITGMVLLAILFG*
Ga0118735_103386472	3300009136	Marine Sediment	MEQDGIPISIGIIIAAAILGATFVAGMVLMAILFV*
Ga0114921_100034767	3300009150	Deep Subsurface	MEQDGIPLSIGIIIAAGILGATFIAGMVLLAILLSVV*
Ga0114921_100046104	3300009150	Deep Subsurface	MGQDGIPISIGIIIAATILGATFIIGMILLAVLSA*
Ga0114921_100226232	3300009150	Deep Subsurface	MGQEGIPLSLGIIIGTAILGATFIMGMVLMAVLGA*
Ga0114921_100411375	3300009150	Deep Subsurface	MEQNGIPLSIGIIIGAAVLGVTFIAGMVLMAILFA*
Ga0114921_100979334	3300009150	Deep Subsurface	MGQNGIPLSIGIIIASAILGVMFVGGMVLLAVLST*
Ga0114921_102042382	3300009150	Deep Subsurface	MEQNGIPLSIGIVIGAAILGVMFVCGMVLMAVLSA*
Ga0114921_102160412	3300009150	Deep Subsurface	MGQDGIPLSIGIIIAAAILGATFVAGMVLMAILSA*
Ga0114921_104139143	3300009150	Deep Subsurface	MGEDGIPISIGIIIAAAILGATFVAGVVLMAILFA*
Ga0114921_104235222	3300009150	Deep Subsurface	MEQNGIPLSIGIVIGAAILGVMFVCGMVLMAVLFT*
Ga0114921_109709202	3300009150	Deep Subsurface	MEQNGIPLSIGIIIAAAILGVTFVAGVVVMAILLA*
Ga0117906_11050623	3300009311	Marine	MGQEGIPLSIGLIIGAAILGAALVAGLVIMAVVGAFS*
Ga0114925_100575385	3300009488	Deep Subsurface	MEQDGIPLSIGIIIAAAILGATFIAGMVLLAILLSA*
Ga0114925_111556452	3300009488	Deep Subsurface	MEQDGIPLSIGIIIAAVILGAAFVVGMVLMAVLSA*
Ga0114930_100340884	3300009499	Deep Subsurface	MQQQQDGIPLSIGIIIAAAVLGAAFIAGMVLLAILLA*
Ga0114920_100501403	3300009528	Deep Subsurface	MGQDGIPISIGIIIAATILGATFIIGMILLAILSA*
Ga0114920_100819041	3300009528	Deep Subsurface	MTQNGIPLSIGIIIAAVILGATFIAGVVLMAILFAQV*
Ga0114920_101392443	3300009528	Deep Subsurface	MGQNGIPLSIGIIIASAILGVMFVGGMVPLAVLST*
Ga0114920_103725152	3300009528	Deep Subsurface	MEQNGIPLSIGIIIGAAVLGVTFIAGMVLMAILLA*
Ga0114920_106448813	3300009528	Deep Subsurface	MGQDGIPLSIGIIIAAAILGVTFIAGMVLLAILFV*
Ga0114920_108144872	3300009528	Deep Subsurface	MGQNGIPLSIGVIIAAAILGATFVVGMVLMAVLSA*
Ga0114920_108792623	3300009528	Deep Subsurface	MGQDGIPLSIGIIIAAAILGVMFVAGMVLMAILSV*
Ga0114920_110566712	3300009528	Deep Subsurface	MEEGIPLSIGIIIAAAILGVTFVAGMVLLAVLFV*
Ga0114919_100447532	3300009529	Deep Subsurface	MGQDGIPISIGIIIAAVILGACFVMGMVLMAILFA*
Ga0114919_102120561	3300009529	Deep Subsurface	MGQDGIPISIGIIIAAAILGVTFVAGMVLMAILFT*
Ga0114919_102666212	3300009529	Deep Subsurface	MRQDGIPISIGIIIAAAILGATFIAGVVLMAILFT*
Ga0129287_105010431	3300009538	Beach Aquifer Porewater	MEQQGIPLSIGIIIAAAVIGATFIAGMALMAILSALK*
Ga0129287_105275721	3300009538	Beach Aquifer Porewater	MEQQGLPVSISIIIAAAVIGVMFAAGMVLLAVLSSK*
Ga0131789_100573473	3300009874	Sediment	KGVIMGENGIPISVGIIIGAAILGAMTIAGMILMAIIGGAIG*
Ga0129301_10008382	3300010284	Hot Spring Microbial Mat	MQDGIPLSLGIIVAAAILGATFVLGMVLMAVLFP*
Ga0129297_101825183	3300010324	Lake Sediment	MGPDGIPVSIGIIIAAAILGASFVLGMVLMAILFA*
Ga0129297_105419292	3300010324	Lake Sediment	MGQDGIPLSLGIIIAAAILGATFVLGMVLMAVLSA*
Ga0129298_100365914	3300010328	Lake Sediment	MGQDGIPVSIGIIIAAAILGASFVLGMVLMAILFA*
Ga0136851_101854575	3300010413	Mangrove Sediment	MGQDGIPISIGIIIAAAILGACFVLGMVLMAVLTA*
Ga0139323_1465152	3300010995	Sediment	MGQDGIPLSISIIIAAAVLGATFIIGMLLFAVLSAA*
Ga0139308_1164242	3300010996	Sediment	MNQEGIPLSIGIIVAASVLGAAFIAGMVLLAVLFA*
Ga0151652_112186122	3300011340	Wetland	MGENGLPLSVGIIIAAAVLGVLVIVGMVLAAILGA*
Ga0151652_128569192	3300011340	Wetland	MGENSLPLSVGIIIAAAVLGVLVIVGLVLLAILGA*
Ga0153915_131848582	3300012931	Freshwater Wetlands	MNQDGIPLSLGVVIAAAILGAFIVAGMVIFAVISII*
Ga0153916_112537092	3300012964	Freshwater Wetlands	MGQDGIPISITIIVAAAILGAAFIAGMVLLAVLFP*
Ga0153916_116684713	3300012964	Freshwater Wetlands	MGQDGIPVSIGIIIAAAILGACFVLGMVLMAILFA*
Ga0153916_119567162	3300012964	Freshwater Wetlands	MNQDGIPMSLAAIIAAAILGAAFVAGMVLLAVLFG*
Ga0163202_10041322	3300013086	Freshwater	MGQDGIPISIGIIIAAAILGACFVLGMVLLAILFA*
Ga0163203_10019205	3300013089	Freshwater	MGDNGIPLSIGIIIAAAVLGATFIAGMVLLAVLFG*
(restricted) Ga0172365_100725652	3300013127	Sediment	MNQDGIPLSIGIIIAAVVLGAAFVAGMVLLAVLFV*
(restricted) Ga0172366_105318552	3300013128	Sediment	MGQDGIPLSIGIIIAAAILGATFIIGMVMLAILSA*
(restricted) Ga0172366_106934072	3300013128	Sediment	MMGDNGVPLSIGIIIAAAILGAAFIAGMVLLAVLFT*
Ga0180009_101716673	3300015370	Groundwater	MGQDGIPLSIGIIIAAAILGVTFVAGMVLMAILSA*
Ga0180009_103238141	3300015370	Groundwater	MGQNGIPIAITIIVAAAILGATFIVGMVLMAVLFT*
Ga0180437_1000783115	3300017963	Hypersaline Lake Sediment	MGQDGIPISIGIIIAAAILGACFVLGMVLMAILFA
Ga0180437_104532982	3300017963	Hypersaline Lake Sediment	MGQDGIPVSIGMIIAAAILGACFVLGMVLMAVLFA
Ga0180437_107329272	3300017963	Hypersaline Lake Sediment	MGQDGIPISIGIIIAAAILGACFVLGMVLMAILFT
Ga0180437_107468872	3300017963	Hypersaline Lake Sediment	MGENGIPLSIGLIVAAAILGATFVIGMVLMAVLFA
Ga0180438_104130143	3300017971	Hypersaline Lake Sediment	MGQEGIPLAIGVIVGAAILGVMIVAGFVLLAILST
Ga0180432_102240732	3300017989	Hypersaline Lake Sediment	MGQDGIPLSIGLVIAAAILGVAFVAGMVLMAVLFV
Ga0194113_101134353	3300020074	Freshwater Lake	MGQDGIPISIGIIIAAAILGACFVLGMVLMAVLFT
Ga0194111_108989932	3300020083	Freshwater Lake	MEQGGIPLSLGIIVAAAILGATFVLGMILMAVLSI
Ga0214088_13886375	3300020814	Granular Sludge	MGDNGIPVTMGVIIAAAVLGAMIIAGLVLLAVFLV
Ga0214088_14310302	3300020814	Granular Sludge	MNQEGIPLSLGVVMAAAILGAFIVAGMVIFAVFSII
Ga0226659_103276292	3300021603	Granular Sludge	MNQEGIPLSLGVVIAAAILGAFIVAGMVIFAVFSII
Ga0224506_100288554	3300022221	Sediment	MGDNGIPLSIGIIIAAAILGATFIAGMVLLAVLLQLTAL
Ga0224506_103818412	3300022221	Sediment	MEQEGIPLSIGIIIAAAILGATFIAGMVLLAVLFT
Ga0224501_101482472	3300022223	Sediment	MGDNGIPLSIGIIIAAAILGATFIAGMVLLAVLFS
Ga0212089_102354882	3300022551	Lake Sediment	MGQDGIPVSIGIIIAAAILGASFVLGMVLMAILFA
Ga0212124_1000209612	3300022553	Freshwater	MGQDGIPISIGIIIAAAILGACFVLGMVLLAILFA
Ga0212124_100302185	3300022553	Freshwater	EQDGMPLSIGIIIAAAILGATFIAGMVLLAVLFGA
Ga0212124_100495441	3300022553	Freshwater	MGDNGIPLSIGIIIAAAVLGATFIAGMVLLAVLFG
Ga0209978_100015112	3300024263	Deep Subsurface	MEQNGIPLSIGIVIGAAILGVMFVCGMVLMAVLFT
Ga0209978_100033182	3300024263	Deep Subsurface	MGQDGIPISIGIIIAAAILGATFIAGVVLMAILFV
Ga0209978_100040262	3300024263	Deep Subsurface	MEQNGIPLSIGIVIGAAILGVMFVCGMVLMAVLSA
Ga0209978_100156316	3300024263	Deep Subsurface	MGQDGIPISIGIIIAATILGATFIIGMILLAVLSA
Ga0209978_100172342	3300024263	Deep Subsurface	MEQDGIPLSIGIIIAAGILGATFIAGMVLLAILLSVV
Ga0209978_103287332	3300024263	Deep Subsurface	MGQDGIPLSIGIIIAAAILGATFVAGMVLMAILSA
Ga0209978_104590213	3300024263	Deep Subsurface	MEQNGIPLSIGIIIGAAVLGVTFIAGMVLMAILFA
Ga0209979_10790333	3300024353	Deep Subsurface	MQQQQDGIPLSIGIIIAAAVLGAAFIAGMVLLAILLA
Ga0209979_10915793	3300024353	Deep Subsurface	MGQDGIPLSIGIIIAAGILGATFIAGMVLLAILLSVV
Ga0209979_11702462	3300024353	Deep Subsurface	MGQDGIPLSIGIIIAAAILGATFIAGMVLLAILFV
Ga0209991_101302001	3300024429	Deep Subsurface	MGQDGIPLSIGIIIAAAILGVMFVAGMVLMAILSV
Ga0209991_102427603	3300024429	Deep Subsurface	MGQDGIPISIGIIIAATILGATFIIGMILLAILSA
Ga0209991_104813252	3300024429	Deep Subsurface	MGQEGIPLSLGVIIAAAILGATFVAGLVLMAVLLG
Ga0209986_1000006688	3300024433	Deep Subsurface	MGDNGIPLSIGIIIAAAVLGATFIAGMVLLAILSA
Ga0209986_101577693	3300024433	Deep Subsurface	MGQDGIPLSIGIIIGAAILGVMFVGGMVLVAILFT
Ga0209986_105412262	3300024433	Deep Subsurface	GVIMGQDGIPISIGIIIAAAILGATFIAGVVLMAILFT
Ga0209212_12104641	3300025309	Soil	MQDGIPLSIGIIIVAALLGATFIAGVVVFSVLSAAF
Ga0209431_112535852	3300025313	Soil	MQDGIPLSIGIIIAAAVLGATFIAGMVVFAVLSAPF
Ga0209342_103552351	3300025326	Soil	PVSIGIIIAAAILGAVLGGAFIVGMAVQAVLGAGQ
Ga0208325_11536563	3300025824	Freshwater	MGQDGIPLSIGIIIAAAILGATFIVGMVLLAVLIA
Ga0209269_10000984	3300027051	Enrichment Culture	MGQEGIPISISIIVAAAILGAMFFIVGMALVLVLAG
Ga0209426_10032484	3300027323	Deep Oceanic, Basalt-Hosted Subsurface Hydrothermal Fluid	MGQDGIPVSIGMIIAAAILGACFVLGMVLMAVLFASG
Ga0209164_11692892	3300027690	Enrichment Culture	MGQDGIPVSIGMIIAAAILGACFVLGMVLMAVLFT
Ga0214474_12453832	3300027740	Soil	MAQEGIPLSIGIIIGAAILGVTFIAGMVLLAVLFT
Ga0209635_101505162	3300027888	Marine Sediment	MGENGIPLSIGLIVAAAILGATFIIGMVLMAVLFA
Ga0209635_101630104	3300027888	Marine Sediment	MEQQGIPLSISIIIAAAVLGATFIIGMVLFAVLSAM
Ga0209635_108651322	3300027888	Marine Sediment	MGQDGIPISIGIIIAAAILGACFVLGMVLMAVLFA
Ga0209636_102991363	3300027893	Marine Sediment	MGQDGIPLSIGIIIAAGILGATFIVGMILLAILFA
Ga0209636_104269302	3300027893	Marine Sediment	MGQNGIPLSIGIIIAAAILGVTFVAGMVLMAILSI
Ga0209636_112293542	3300027893	Marine Sediment	MEQDGIPLSLGIIIGAAILGATFIAGMVLFAILSGL
Ga0209636_112510512	3300027893	Marine Sediment	MGDNGIPLSIGIIIAAAVLGAAFIAGMVLLAILFA
Ga0209427_100065699	3300027901	Marine Sediment	MGQDGIPISIGIIIAAAILGACFVLGMVLTAILFA
Ga0209536_1017417683	3300027917	Marine Sediment	MGQDGIPLSIGVIIAAAVLGTVLVGGMVLLAIIMIS
Ga0268281_11116823	3300028156	Saline Water	MGQDGFPLAIGIIIAAAVLGAAFIAGLVLLAVLAI
Ga0265596_10300343	3300028161	Saline Water	MGQEGIPLSIGIIIAAAILGATFIAGMVLLAILFV
Ga0257137_10391891	3300029693	Marine	VMGQDGFPLAIGIIIAAAVLGAASIAGLVLLAVLAI
Ga0311022_126650472	3300029799	Anaerobic Digester Digestate	MNQEGIPLSLGVVIAAAILGALIVAGMVIFAVFSII
Ga0307925_1307621	3300030714	Soil	MGQDGIPISIGIIIAAAILGACFVLGMVLMAVLSA
Ga0315555_10143764	3300031257	Salt Marsh Sediment	MEDNGIPLSIGIIIAAAVLGAAFIAGMVLLAILLA
Ga0315555_11083622	3300031257	Salt Marsh Sediment	MGDNGIPLSIGIIIAAAVLGATFIAGMVLLAVLLG
Ga0307443_10096241	3300031365	Salt Marsh	MGDNGIPLAIGIIIAAAVLGAAFIAGMVLLAILLA
Ga0307380_102049713	3300031539	Soil	MGEEGIPLSISLIIAASILGATFVIGMVLLAILSG
Ga0315548_10452712	3300031551	Salt Marsh Sediment	MEQDGIPLSIGIIIGAAILGATFIAGMVLFAVLSTL
Ga0307378_106022132	3300031566	Soil	MGQDGFPLAIGIIIAATVLGATFIAGMVLLAVLFG
Ga0307378_110830613	3300031566	Soil	MGQDSFPLAIGIIIAAAILGATFIAGMVLLAVLAL
(restricted) Ga0315308_10800743	3300031587	Sediment	MGQDGIPLSLGIIIAAAILGAIFVLGVLLMAVLSA
(restricted) Ga0315307_10251376	3300031593	Sediment	MGQDGIPLSLGIIIAAAILGAIFVLGVVLMAVLSA
(restricted) Ga0315309_10896492	3300031604	Sediment	MGQDGIPLSLGIIIAAAILGATFVLGMVLMAVLSA
Ga0315545_10716693	3300031624	Salt Marsh Sediment	MEDGIPLSIGIIIGAAILGATFIAGMVLFAVLSAM
Ga0315291_110962922	3300031707	Sediment	MGQDGIPVSIGIIIAAAILGACFVLGMVLMAILFA
Ga0315280_1000498516	3300031862	Sediment	MGQEGLPISLAIIVAATILGAAFIAGMVLLAVLFT
Ga0315280_1001028312	3300031862	Sediment	MNQEGIPLSIGIIVAAAVLGATFIAGMVLLAVLFG
Ga0315280_100143165	3300031862	Sediment	MEQNGVPLSIGIIIAAAILGATFIAGMVLLAVLFT
Ga0315280_100287602	3300031862	Sediment	MGENGIPLSLGIIIAAAVLGATFIAGMVLLAVLFS
Ga0315280_102114893	3300031862	Sediment	MGQDGIPISITIIVAAAILGAAFIAGMVLLAVLFT
Ga0315280_104083702	3300031862	Sediment	MGDNGIPLSIAIIIAAAILGATFVAGMVLLAVLFT
(restricted) Ga0315310_102465752	3300031876	Sediment	MEQDGIPLSLGIIIAAAILGATFVLGMVLMAVLSA
(restricted) Ga0315314_10755753	3300031877	Sediment	MGQDGIPISIGIIIAAAILGACFVLGMVLMAVILA
(restricted) Ga0315312_10207843	3300031898	Sediment	MGQEGIPLSLGVIIAAAVLGAIVVLGMVLLAVLSA
Ga0315274_1000494217	3300031999	Sediment	MGQDGIPISVVIIIATAILGVCFVMSMVLIAVFFS
Ga0315274_103327873	3300031999	Sediment	MAQEGIPLSIGIIIGAAILGVTFIAGMVLMAVLFT
Ga0315296_1000021521	3300032020	Sediment	MGDNGIPLSIGIIIAAAILGATFIVGMVLLAVLFT
Ga0315296_100027119	3300032020	Sediment	MGQDGIPISVVIIIATAILGACFVWGMVLMAIILA
Ga0315296_100139914	3300032020	Sediment	MGDNGIPLSIGIIIAAAILGATFIAGMVLLAVLFT
Ga0315296_100141867	3300032020	Sediment	MGQDGIPISLAIIIAAAILGATFVAGMVLLALLFT
Ga0315296_101710423	3300032020	Sediment	MGDNGIPLSIGIIIAAAILGAMFVAGMVLLAVLFT
Ga0315289_103529181	3300032046	Sediment	MGQDGIPISITIIVAAAILGATFIAGMVLLAVLFT
Ga0315277_112762551	3300032118	Sediment	MAQEGIPLSIGIIIGAAILGFTFIAGMVLLAVLFT
Ga0316624_104277052	3300033486	Soil	MNQDGIPLSLGVIIAAAIMGAFIVAGMVIFAVFSII
Ga0316630_104790352	3300033487	Soil	MNQDGIPLSLGVVIAAAILGAFIVAGMVIFAVFSII
Ga0316628_1010819492	3300033513	Soil	MNQDGIPLSLGVVIAAAILGAFIVTGMVIFAVFSMI
Ga0334965_0005086_7603_7710	3300033991	Sediment	MGQDGVPLSIGIIIAAAILGATFIAGMVLLAILFG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters