Sample 3300026891

Overview

Basic Information
IMG/M Taxon OID	3300026891 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0099864 \| Gp0111012 \| Ga0208889
Sample Name	Soil and rhizosphere microbial communities from Laval, Canada - mgLPB (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	Y
Use Policy	Open

Dataset Contents
Total Genome Size	52137121
Sequencing Scaffolds	30
Novel Protein Genes	32
Associated Families	32

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria	5
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3
All Organisms → cellular organisms → Archaea	3
Not Available	13
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CNPAF512	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Soil And Rhizosphere Microbial Communities From Centre Inrs-Institut Armand-Frappier, Laval, Canada
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil And Rhizosphere Microbial Communities From Centre Inrs-Institut Armand-Frappier, Laval, Canada

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → rhizosphere → soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Laval, Canada
Coordinates	Lat. (^o)	45.54	Long. (^o)	-73.72	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000478	Metagenome / Metatranscriptome	1096	Y
F001436	Metagenome / Metatranscriptome	695	Y
F001440	Metagenome / Metatranscriptome	694	Y
F001604	Metagenome / Metatranscriptome	664	Y
F005950	Metagenome / Metatranscriptome	385	Y
F006148	Metagenome / Metatranscriptome	380	Y
F007147	Metagenome / Metatranscriptome	357	Y
F010126	Metagenome / Metatranscriptome	308	Y
F011453	Metagenome	291	Y
F012136	Metagenome / Metatranscriptome	283	Y
F016898	Metagenome / Metatranscriptome	244	N
F020931	Metagenome / Metatranscriptome	221	Y
F022746	Metagenome / Metatranscriptome	213	Y
F026329	Metagenome / Metatranscriptome	198	Y
F028011	Metagenome	193	Y
F029148	Metagenome	189	Y
F036354	Metagenome / Metatranscriptome	170	Y
F042319	Metagenome / Metatranscriptome	158	Y
F043118	Metagenome / Metatranscriptome	157	Y
F046352	Metagenome / Metatranscriptome	151	Y
F053116	Metagenome	141	N
F057972	Metagenome / Metatranscriptome	135	N
F061030	Metagenome / Metatranscriptome	132	Y
F067850	Metagenome / Metatranscriptome	125	Y
F067918	Metagenome / Metatranscriptome	125	N
F069724	Metagenome / Metatranscriptome	123	Y
F080390	Metagenome / Metatranscriptome	115	N
F082646	Metagenome / Metatranscriptome	113	Y
F084326	Metagenome / Metatranscriptome	112	N
F084328	Metagenome	112	N
F086124	Metagenome / Metatranscriptome	111	N
F105643	Metagenome	100	Y

Family

Category

Number of Sequences

3D Structure?

F000478

Metagenome / Metatranscriptome

1096

F001436

Metagenome / Metatranscriptome

695

F001440

Metagenome / Metatranscriptome

694

F001604

Metagenome / Metatranscriptome

664

F005950

Metagenome / Metatranscriptome

385

F006148

Metagenome / Metatranscriptome

380

F007147

Metagenome / Metatranscriptome

357

F010126

Metagenome / Metatranscriptome

308

F011453

Metagenome

291

F012136

Metagenome / Metatranscriptome

283

F016898

Metagenome / Metatranscriptome

244

F020931

Metagenome / Metatranscriptome

221

F022746

Metagenome / Metatranscriptome

213

F026329

Metagenome / Metatranscriptome

198

F028011

Metagenome

193

F029148

Metagenome

189

F036354

Metagenome / Metatranscriptome

170

F042319

Metagenome / Metatranscriptome

158

F043118

Metagenome / Metatranscriptome

157

F046352

Metagenome / Metatranscriptome

151

F053116

Metagenome

141

F057972

Metagenome / Metatranscriptome

135

F061030

Metagenome / Metatranscriptome

132

F067850

Metagenome / Metatranscriptome

125

F067918

Metagenome / Metatranscriptome

125

F069724

Metagenome / Metatranscriptome

123

F080390

Metagenome / Metatranscriptome

115

F082646

Metagenome / Metatranscriptome

113

F084326

Metagenome / Metatranscriptome

112

F084328

Metagenome

112

F086124

Metagenome / Metatranscriptome

111

F105643

Metagenome

100

Scaffold	Taxonomy	Length	IMG/M Link
Ga0208889_1002083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1267	Open in IMG/M
Ga0208889_1002425	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
Ga0208889_1002884	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
Ga0208889_1003353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	989	Open in IMG/M
Ga0208889_1003733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	936	Open in IMG/M
Ga0208889_1004620	All Organisms → cellular organisms → Archaea	840	Open in IMG/M
Ga0208889_1004745	Not Available	829	Open in IMG/M
Ga0208889_1004768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CNPAF512	827	Open in IMG/M
Ga0208889_1005422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
Ga0208889_1005635	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
Ga0208889_1005733	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
Ga0208889_1006165	Not Available	728	Open in IMG/M
Ga0208889_1006874	All Organisms → cellular organisms → Archaea	691	Open in IMG/M
Ga0208889_1007982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	646	Open in IMG/M
Ga0208889_1008542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	625	Open in IMG/M
Ga0208889_1008725	Not Available	619	Open in IMG/M
Ga0208889_1008747	Not Available	619	Open in IMG/M
Ga0208889_1009964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	585	Open in IMG/M
Ga0208889_1010098	Not Available	581	Open in IMG/M
Ga0208889_1010203	Not Available	578	Open in IMG/M
Ga0208889_1010312	All Organisms → cellular organisms → Archaea	574	Open in IMG/M
Ga0208889_1010978	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
Ga0208889_1011632	Not Available	543	Open in IMG/M
Ga0208889_1011655	Not Available	542	Open in IMG/M
Ga0208889_1012641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
Ga0208889_1012820	Not Available	518	Open in IMG/M
Ga0208889_1012853	Not Available	518	Open in IMG/M
Ga0208889_1013044	Not Available	514	Open in IMG/M
Ga0208889_1013175	Not Available	512	Open in IMG/M
Ga0208889_1013565	Not Available	505	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0208889_1002083

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium

1267

Open in IMG/M

Ga0208889_1002425

All Organisms → cellular organisms → Bacteria

1170

Open in IMG/M

Ga0208889_1002884

All Organisms → cellular organisms → Bacteria

1071

Open in IMG/M

Ga0208889_1003353

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium

989

Open in IMG/M

Ga0208889_1003733

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium

936

Open in IMG/M

Ga0208889_1004620

All Organisms → cellular organisms → Archaea

840

Open in IMG/M

Ga0208889_1004745

Not Available

829

Open in IMG/M

Ga0208889_1004768

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CNPAF512

827

Open in IMG/M

Ga0208889_1005422

All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium

776

Open in IMG/M

Ga0208889_1005635

All Organisms → cellular organisms → Bacteria

760

Open in IMG/M

Ga0208889_1005733

All Organisms → cellular organisms → Bacteria

753

Open in IMG/M

Ga0208889_1006165

Not Available

728

Open in IMG/M

Ga0208889_1006874

All Organisms → cellular organisms → Archaea

691

Open in IMG/M

Ga0208889_1007982

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia

646

Open in IMG/M

Ga0208889_1008542

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria

625

Open in IMG/M

Ga0208889_1008725

Not Available

619

Open in IMG/M

Ga0208889_1008747

Not Available

619

Open in IMG/M

Ga0208889_1009964

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium

585

Open in IMG/M

Ga0208889_1010098

Not Available

581

Open in IMG/M

Ga0208889_1010203

Not Available

578

Open in IMG/M

Ga0208889_1010312

All Organisms → cellular organisms → Archaea

574

Open in IMG/M

Ga0208889_1010978

All Organisms → cellular organisms → Bacteria

558

Open in IMG/M

Ga0208889_1011632

Not Available

543

Open in IMG/M

Ga0208889_1011655

Not Available

542

Open in IMG/M

Ga0208889_1012641

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium

521

Open in IMG/M

Ga0208889_1012820

Not Available

518

Open in IMG/M

Ga0208889_1012853

Not Available

518

Open in IMG/M

Ga0208889_1013044

Not Available

514

Open in IMG/M

Ga0208889_1013175

Not Available

512

Open in IMG/M

Ga0208889_1013565

Not Available

505

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0208889_1002083	Ga0208889_10020832	F007147	MVERAAKNDRVRRCLARGVVVFLWIVPLQIWALAEDDPLQKAVNYLFTGRNDPQDAPEILDRKSCVVVVSNLKFKQPIRYYLGRFRMDTAFINKTYAGSETIHSLDVKGGEVIVEYLDPGKSTVLHGHKSAQISLPGDIDQISKALELIASLCRNGKPAE
Ga0208889_1002425	Ga0208889_10024253	F001436	VSFRDARHSDIGVVVLLCVSSIAKGVVMDTHKQDVATLIELLKMAAERWPRSEADQVSQSELLREDHSLLEMWPEACRRTGIGRREFPPGVIKLWKQRLGREN
Ga0208889_1002884	Ga0208889_10028842	F011453	MKNRFTVAAAVVAGAGVLSACATEKSDTTRREYDRSVADYQNCIAANQMSTCEAERRIMEANKKVLQRSRPTY
Ga0208889_1003353	Ga0208889_10033531	F006148	VAESENTFPMDIREGSSRPWNFRPSGHLVVILASDDEAQRAERALVAQGFASRDIKLYTGKQILANQEEYVSRRGVPSTIVGSVVDDVEGRALYLGYARDDRCAMWVRIPDESNVPMALRVLADHNYLHTRYYGFGKLTDYQVS
Ga0208889_1003733	Ga0208889_10037332	F057972	MQKVRADGFDRLDPLEAARAEPTLGPLPLLEPESPHYPLAMVEWHDAWFDLDLESPDGCRQDYLVRTVGFLVSEGPRFVSLAQEILPDGEGLRAVTHIPVPIIERVIRLDRSAETFDRPASPHLPPG
Ga0208889_1004620	Ga0208889_10046202	F010126	SNVTNRTSSDQIAYRNPQYGIFLLFPSNWTFSTSGLPEYTQIAGFYAPLQNLSDPIPARFTISVMSYQQNVSLKDFTNVTLSSLNQTNQIKILSSGATTLAGRPGYQVIFSTLPNMGNPVSFEIMHSWTAVDNKIYVFQYSVESSKFDTYLPTVKQILGSLRINGIG
Ga0208889_1004745	Ga0208889_10047451	F084328	PSASDARPDWEAPAFTKLPIASRTGSGANVANDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK
Ga0208889_1004768	Ga0208889_10047681	F105643	VFIRKLKPGERAPETTDRIYIDRLADGRISWTGSVDVGGKARLGASRVDFATIQEAETDAIAWARGQGTTELQIEGRNN
Ga0208889_1005422	Ga0208889_10054222	F036354	VIAKRKGVAARWGLKEAWIKCASRWTRTGYKALAPDER
Ga0208889_1005635	Ga0208889_10056351	F016898	KWLYCFACEEPFELAGSPASCGCGRSSARLDGGIVEIQGPTRALAPVETVIRLDGGKWAPLPEDVFIRRVLPRAA
Ga0208889_1005733	Ga0208889_10057332	F000478	MRKDVREFIRRLEAVGLTVESTPGHYRVLRDGQPLRKANGMPFMLPFSPDTVRWRRAAIVELRKLGINV
Ga0208889_1006165	Ga0208889_10061651	F053116	MNILKRNRFDRRSDSTLIVLIAISLLYIMVTITALYPFDRLQIVAAATLQENNNNTKPVFLSTISTTIATGVGATGAILTVPGYLRARKQPKFLAAYLLKIHNKHDELCRYPKLSDKSKNEYRNFLDSLRCDIIYSLKNGDINENQY
Ga0208889_1006523	Ga0208889_10065231	F080390	MIIVLAIGMFCASIYMLLSGLTVKQREIAITLRKAKRYGTRDQREIETRRSVNDRIVGPLTQQIADITQKILPKSDPNEIHARLMAAGLSRSMSPQMYLALKGGLVATAL
Ga0208889_1006874	Ga0208889_10068741	F005950	MTYAKQKVKVKIHRTSDYDDKYTGIKDFPDEKAMLQYGLSKVHEVIIKKYTKDDEFMATARKTRGIKFDYDMELYDYIGTDVRESKR
Ga0208889_1007982	Ga0208889_10079822	F001440	MPNAKSIGWAIYAVGFAIWLFGYLSAGHVSVIDWPWWISSFVPNLEAELGLALMFASMIPIYWRAGRKRA
Ga0208889_1008542	Ga0208889_10085421	F061030	EGLKLRPKREAGGTQTLDGGRVAFPKYYRREGLKFHRSHALEGYLACMRAAGRK
Ga0208889_1008725	Ga0208889_10087252	F022746	MSQSGWYHDKAAECNRMALASTNAVIRGRYIRDRDSWQEIAARIDAAEEAEQRKE
Ga0208889_1008747	Ga0208889_10087471	F029148	MSSLDWKEIEIVLRGKRVKGPYNVSEGLVTVAAWSGTNTAPLGILPAERLAKKCCCAI
Ga0208889_1009964	Ga0208889_10099642	F069724	MVDVFMALLSFRGFDTPSLPAQGEQRRSTYFNIGRDIP
Ga0208889_1010098	Ga0208889_10100981	F067850	MVQLQLLDLMISRECGAVPMDAATRADLIDLTARVIAAVFHEEG
Ga0208889_1010203	Ga0208889_10102031	F086124	VIGSERLVAYRTGRPDPSFLLQSDGKTHMTDIIPTAAEAKDLADDCCEALAELLSRPTTTARRPITERVLAEMQKTLSDESWAEAMGSPIKTYLGFNSIHLCMRFLRSNGHLAQAARIEAALEAAAGRLSETRTMTLIPRSTD
Ga0208889_1010312	Ga0208889_10103121	F020931	FGFIKRKTSGFFQDRKSTANSAQSVTDKELLEIIETEKKILEKDLSTDLEPIRNSALHCLDNLKESAEELEEQEIKVENPQFESLINTSKKILITSIKKESFIGSSEIKNYEDAVKFKNNLELLVNRFGQVGDSHNKILNEFMRRQVNKLKSEFDNLSSLLKEVTKVLSVKESQINNCVACRDDLILLKEK
Ga0208889_1010643	Ga0208889_10106431	F084326	EVVNELDVPAYIYLPMIGFLNGGSSWEYAQMAATFRKGFGETGLLIVVLALVKPLSPPGDLSGQLICGPIEA
Ga0208889_1010978	Ga0208889_10109781	F028011	ISGNSAKTNHLLEKISHMDSKTYDRLLDLQKELQKPEVAQWYQTELLFTSADFNTIKNNVDQAVAILSGRKGNGLFLDANVSAAIGAAGNQAQPTETTPGSTNVAGTPSTVITGSVGRWEKGAGNLPADVETVQSLLQTAAQKLQAPQLDPKGVDGKIAQPPRKSNTVAAIEAFQSRFNISVDGL
Ga0208889_1011632	Ga0208889_10116321	F043118	MEQYDDTFETVDAPPTIKEIEKRLRKLGCTKEQVSRHLDQVTKSRIAPVSEKRNKNRPHKIDWP
Ga0208889_1011655	Ga0208889_10116551	F046352	VLLGVIAYAALVNRPAENAFASGANDACAAVQRSEGGVDLSRTPTRGELQRALNVRLQALGAIRALEQPEQDAVMASTFLSAFAETNASITRLEKAIGGGDHEVSRALRSLRGDVRHERELAVRAGIAGCGGLAIR
Ga0208889_1012641	Ga0208889_10126412	F082646	MVRVGYENGGAFSFGFLVVNDGPLPVKIQRIEVTGQSDLLVTVGLETAANRYAGSLGQGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCGRFAAGASETYTRFKVTYSVLGFTKH
Ga0208889_1012820	Ga0208889_10128201	F042319	MTDITYQTATAGIASPSALLSRIAAWCTHFAEGIREGREIAARYHALAQLSTPELARHGLNRQMIARAALTGF
Ga0208889_1012853	Ga0208889_10128532	F001604	MTDILDVARSSREEPKLIVRKAPHAAVWSVWAVLEGIPPEEIFEGSSEEEASSWINTGGQAWLKERRQKRNT
Ga0208889_1013044	Ga0208889_10130442	F026329	MDSALLQNLMAGAGSSSQFIGGLIVALLYVVIGLLGAIGSIVVFRRIFQGRWEQIFWASFLVVI
Ga0208889_1013175	Ga0208889_10131751	F067918	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHK
Ga0208889_1013565	Ga0208889_10135652	F012136	MKTITLLAAIAGVIIGAAGPASAQGIYLDFGNNPGPRYRDYDGPRYRDYDGPRYRDRQRYGERGERGYYPPSGRFKTFNGCQNGWTVQD

Scaffold ID

Protein ID

Family

Sequence

Ga0208889_1002083

Ga0208889_10020832

F007147

MVERAAKNDRVRRCLARGVVVFLWIVPLQIWALAEDDPLQKAVNYLFTGRNDPQDAPEILDRKSCVVVVSNLKFKQPIRYYLGRFRMDTAFINKTYAGSETIHSLDVKGGEVIVEYLDPGKSTVLHGHKSAQISLPGDIDQISKALELIASLCRNGKPAE

Ga0208889_1002425

Ga0208889_10024253

F001436

VSFRDARHSDIGVVVLLCVSSIAKGVVMDTHKQDVATLIELLKMAAERWPRSEADQVSQSELLREDHSLLEMWPEACRRTGIGRREFPPGVIKLWKQRLGREN

Ga0208889_1002884

Ga0208889_10028842

F011453

MKNRFTVAAAVVAGAGVLSACATEKSDTTRREYDRSVADYQNCIAANQMSTCEAERRIMEANKKVLQRSRPTY

Ga0208889_1003353

Ga0208889_10033531

F006148

VAESENTFPMDIREGSSRPWNFRPSGHLVVILASDDEAQRAERALVAQGFASRDIKLYTGKQILANQEEYVSRRGVPSTIVGSVVDDVEGRALYLGYARDDRCAMWVRIPDESNVPMALRVLADHNYLHTRYYGFGKLTDYQVS

Ga0208889_1003733

Ga0208889_10037332

F057972

MQKVRADGFDRLDPLEAARAEPTLGPLPLLEPESPHYPLAMVEWHDAWFDLDLESPDGCRQDYLVRTVGFLVSEGPRFVSLAQEILPDGEGLRAVTHIPVPIIERVIRLDRSAETFDRPASPHLPPG

Ga0208889_1004620

Ga0208889_10046202

F010126

SNVTNRTSSDQIAYRNPQYGIFLLFPSNWTFSTSGLPEYTQIAGFYAPLQNLSDPIPARFTISVMSYQQNVSLKDFTNVTLSSLNQTNQIKILSSGATTLAGRPGYQVIFSTLPNMGNPVSFEIMHSWTAVDNKIYVFQYSVESSKFDTYLPTVKQILGSLRINGIG

Ga0208889_1004745

Ga0208889_10047451

F084328

PSASDARPDWEAPAFTKLPIASRTGSGANVANDPARVVEPAAPGQPLSKLGFSFEMAFPMSSRSDK

Ga0208889_1004768

Ga0208889_10047681

F105643

VFIRKLKPGERAPETTDRIYIDRLADGRISWTGSVDVGGKARLGASRVDFATIQEAETDAIAWARGQGTTELQIEGRNN

Ga0208889_1005422

Ga0208889_10054222

F036354

VIAKRKGVAARWGLKEAWIKCASRWTRTGYKALAPDER

Ga0208889_1005635

Ga0208889_10056351

F016898

KWLYCFACEEPFELAGSPASCGCGRSSARLDGGIVEIQGPTRALAPVETVIRLDGGKWAPLPEDVFIRRVLPRAA

Ga0208889_1005733

Ga0208889_10057332

F000478

MRKDVREFIRRLEAVGLTVESTPGHYRVLRDGQPLRKANGMPFMLPFSPDTVRWRRAAIVELRKLGINV

Ga0208889_1006165

Ga0208889_10061651

F053116

MNILKRNRFDRRSDSTLIVLIAISLLYIMVTITALYPFDRLQIVAAATLQENNNNTKPVFLSTISTTIATGVGATGAILTVPGYLRARKQPKFLAAYLLKIHNKHDELCRYPKLSDKSKNEYRNFLDSLRCDIIYSLKNGDINENQY

Ga0208889_1006523

Ga0208889_10065231

F080390

MIIVLAIGMFCASIYMLLSGLTVKQREIAITLRKAKRYGTRDQREIETRRSVNDRIVGPLTQQIADITQKILPKSDPNEIHARLMAAGLSRSMSPQMYLALKGGLVATAL

Ga0208889_1006874

Ga0208889_10068741

F005950

MTYAKQKVKVKIHRTSDYDDKYTGIKDFPDEKAMLQYGLSKVHEVIIKKYTKDDEFMATARKTRGIKFDYDMELYDYIGTDVRESKR

Ga0208889_1007982

Ga0208889_10079822

F001440

MPNAKSIGWAIYAVGFAIWLFGYLSAGHVSVIDWPWWISSFVPNLEAELGLALMFASMIPIYWRAGRKRA

Ga0208889_1008542

Ga0208889_10085421

F061030

EGLKLRPKREAGGTQTLDGGRVAFPKYYRREGLKFHRSHALEGYLACMRAAGRK

Ga0208889_1008725

Ga0208889_10087252

F022746

MSQSGWYHDKAAECNRMALASTNAVIRGRYIRDRDSWQEIAARIDAAEEAEQRKE

Ga0208889_1008747

Ga0208889_10087471

F029148

MSSLDWKEIEIVLRGKRVKGPYNVSEGLVTVAAWSGTNTAPLGILPAERLAKKCCCAI

Ga0208889_1009964

Ga0208889_10099642

F069724

MVDVFMALLSFRGFDTPSLPAQGEQRRSTYFNIGRDIP

Ga0208889_1010098

Ga0208889_10100981

F067850

MVQLQLLDLMISRECGAVPMDAATRADLIDLTARVIAAVFHEEG

Ga0208889_1010203

Ga0208889_10102031

F086124

VIGSERLVAYRTGRPDPSFLLQSDGKTHMTDIIPTAAEAKDLADDCCEALAELLSRPTTTARRPITERVLAEMQKTLSDESWAEAMGSPIKTYLGFNSIHLCMRFLRSNGHLAQAARIEAALEAAAGRLSETRTMTLIPRSTD

Ga0208889_1010312

Ga0208889_10103121

F020931

FGFIKRKTSGFFQDRKSTANSAQSVTDKELLEIIETEKKILEKDLSTDLEPIRNSALHCLDNLKESAEELEEQEIKVENPQFESLINTSKKILITSIKKESFIGSSEIKNYEDAVKFKNNLELLVNRFGQVGDSHNKILNEFMRRQVNKLKSEFDNLSSLLKEVTKVLSVKESQINNCVACRDDLILLKEK

Ga0208889_1010643

Ga0208889_10106431

F084326

EVVNELDVPAYIYLPMIGFLNGGSSWEYAQMAATFRKGFGETGLLIVVLALVKPLSPPGDLSGQLICGPIEA

Ga0208889_1010978

Ga0208889_10109781

F028011

ISGNSAKTNHLLEKISHMDSKTYDRLLDLQKELQKPEVAQWYQTELLFTSADFNTIKNNVDQAVAILSGRKGNGLFLDANVSAAIGAAGNQAQPTETTPGSTNVAGTPSTVITGSVGRWEKGAGNLPADVETVQSLLQTAAQKLQAPQLDPKGVDGKIAQPPRKSNTVAAIEAFQSRFNISVDGL

Ga0208889_1011632

Ga0208889_10116321

F043118

MEQYDDTFETVDAPPTIKEIEKRLRKLGCTKEQVSRHLDQVTKSRIAPVSEKRNKNRPHKIDWP

Ga0208889_1011655

Ga0208889_10116551

F046352

VLLGVIAYAALVNRPAENAFASGANDACAAVQRSEGGVDLSRTPTRGELQRALNVRLQALGAIRALEQPEQDAVMASTFLSAFAETNASITRLEKAIGGGDHEVSRALRSLRGDVRHERELAVRAGIAGCGGLAIR

Ga0208889_1012641

Ga0208889_10126412

F082646

MVRVGYENGGAFSFGFLVVNDGPLPVKIQRIEVTGQSDLLVTVGLETAANRYAGSLGQGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCGRFAAGASETYTRFKVTYSVLGFTKH

Ga0208889_1012820

Ga0208889_10128201

F042319

MTDITYQTATAGIASPSALLSRIAAWCTHFAEGIREGREIAARYHALAQLSTPELARHGLNRQMIARAALTGF

Ga0208889_1012853

Ga0208889_10128532

F001604

MTDILDVARSSREEPKLIVRKAPHAAVWSVWAVLEGIPPEEIFEGSSEEEASSWINTGGQAWLKERRQKRNT

Ga0208889_1013044

Ga0208889_10130442

F026329

MDSALLQNLMAGAGSSSQFIGGLIVALLYVVIGLLGAIGSIVVFRRIFQGRWEQIFWASFLVVI

Ga0208889_1013175

Ga0208889_10131751

F067918

MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHK

Ga0208889_1013565

Ga0208889_10135652

F012136

MKTITLLAAIAGVIIGAAGPASAQGIYLDFGNNPGPRYRDYDGPRYRDYDGPRYRDRQRYGERGERGYYPPSGRFKTFNGCQNGWTVQD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300026891: Soil and rhizosphere microbial communities from Laval, Canada - mgLPB (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences