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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F105643 |
| Family Type | Metagenome |
| Number of Sequences | 100 |
| Average Sequence Length | 81 residues |
| Representative Sequence | VFIRKLKPGERAPETTDRIYIDRLADGRISWTGSVDVGGKARLGASRVDFATIQEAETDAIAWARGQGTTELQIEGPNN |
| Number of Associated Samples | 83 |
| Number of Associated Scaffolds | 100 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Bacteria |
| % of genes with valid RBS motifs | 69.00 % |
| % of genes near scaffold ends (potentially truncated) | 36.00 % |
| % of genes from short scaffolds (< 2000 bps) | 84.00 % |
| Associated GOLD sequencing projects | 71 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.76 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Bacteria (55.000 % of family members) |
| NCBI Taxonomy ID | 2 |
| Taxonomy | All Organisms → cellular organisms → Bacteria |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere (13.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (63.000 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (70.000 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 14.02% β-sheet: 31.78% Coil/Unstructured: 54.21% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.76 |
| Powered by PDBe Molstar | |
| SCOP family | SCOP domain | Representative PDB | TM-score |
|---|---|---|---|
| c.51.5.1: CinA-like | d2a9sa1 | 2a9s | 0.60644 |
| d.87.2.1: CO dehydrogenase flavoprotein C-terminal domain-like | d1rm6b1 | 1rm6 | 0.60492 |
| d.87.2.1: CO dehydrogenase flavoprotein C-terminal domain-like | d1n62c1 | 1n62 | 0.60063 |
| d.50.2.0: automated matches | d4mlva2 | 4mlv | 0.59177 |
| c.55.4.1: Ribosomal protein L18 and S11 | d1vq8n1 | 1vq8 | 0.58489 |
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| Pfam ID | Name | % Frequency in 100 Family Scaffolds |
|---|---|---|
| PF01872 | RibD_C | 6.00 |
| PF00313 | CSD | 6.00 |
| PF02867 | Ribonuc_red_lgC | 4.00 |
| PF07568 | HisKA_2 | 2.00 |
| PF04366 | Ysc84 | 2.00 |
| PF02661 | Fic | 2.00 |
| PF00903 | Glyoxalase | 2.00 |
| PF06348 | DUF1059 | 1.00 |
| PF01176 | eIF-1a | 1.00 |
| PF12680 | SnoaL_2 | 1.00 |
| PF04209 | HgmA_C | 1.00 |
| PF04402 | SIMPL | 1.00 |
| PF03988 | DUF347 | 1.00 |
| PF01557 | FAA_hydrolase | 1.00 |
| PF01381 | HTH_3 | 1.00 |
| PF04964 | Flp_Fap | 1.00 |
| PF13545 | HTH_Crp_2 | 1.00 |
| COG ID | Name | Functional Category | % Frequency in 100 Family Scaffolds |
|---|---|---|---|
| COG0262 | Dihydrofolate reductase | Coenzyme transport and metabolism [H] | 6.00 |
| COG1985 | Pyrimidine reductase, riboflavin biosynthesis | Coenzyme transport and metabolism [H] | 6.00 |
| COG0209 | Ribonucleotide reductase alpha subunit | Nucleotide transport and metabolism [F] | 4.00 |
| COG2930 | Lipid-binding SYLF domain, Ysc84/FYVE family | Lipid transport and metabolism [I] | 2.00 |
| COG3920 | Two-component sensor histidine kinase, HisKA and HATPase domains | Signal transduction mechanisms [T] | 2.00 |
| COG0361 | Translation initiation factor IF-1 | Translation, ribosomal structure and biogenesis [J] | 1.00 |
| COG2859 | Outer membrane channel-forming protein BP26/OMP28, SIMPL family | Cell wall/membrane/envelope biogenesis [M] | 1.00 |
| COG2968 | Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain | Function unknown [S] | 1.00 |
| COG3471 | Predicted secreted (periplasmic) protein | Function unknown [S] | 1.00 |
| COG3508 | Homogentisate 1,2-dioxygenase | Secondary metabolites biosynthesis, transport and catabolism [Q] | 1.00 |
| COG3847 | Flp pilus assembly protein, pilin Flp | Extracellular structures [W] | 1.00 |
| COG4705 | Uncharacterized membrane-anchored protein | Function unknown [S] | 1.00 |
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| Name | Rank | Taxonomy | Distribution |
| All Organisms | root | All Organisms | 55.00 % |
| Unclassified | root | N/A | 45.00 % |
| Visualization |
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| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300000364|INPhiseqgaiiFebDRAFT_101222996 | Not Available | 653 | Open in IMG/M |
| 3300000364|INPhiseqgaiiFebDRAFT_105646608 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 2263 | Open in IMG/M |
| 3300000789|JGI1027J11758_12937650 | Not Available | 978 | Open in IMG/M |
| 3300001915|JGI24741J21665_1020214 | Not Available | 1048 | Open in IMG/M |
| 3300001989|JGI24739J22299_10070866 | Not Available | 1085 | Open in IMG/M |
| 3300002239|JGI24034J26672_10024325 | Not Available | 965 | Open in IMG/M |
| 3300002244|JGI24742J22300_10074892 | Not Available | 634 | Open in IMG/M |
| 3300002568|C688J35102_120959349 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales | 3162 | Open in IMG/M |
| 3300004463|Ga0063356_105797640 | All Organisms → cellular organisms → Bacteria | 530 | Open in IMG/M |
| 3300005093|Ga0062594_100548313 | Not Available | 995 | Open in IMG/M |
| 3300005093|Ga0062594_100738319 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 897 | Open in IMG/M |
| 3300005159|Ga0066808_1008483 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CNPAF512 | 894 | Open in IMG/M |
| 3300005163|Ga0066823_10019572 | Not Available | 1041 | Open in IMG/M |
| 3300005163|Ga0066823_10078367 | Not Available | 645 | Open in IMG/M |
| 3300005168|Ga0066809_10007395 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1981 | Open in IMG/M |
| 3300005168|Ga0066809_10113846 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Corallococcus → Corallococcus soli | 674 | Open in IMG/M |
| 3300005295|Ga0065707_10141989 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1760 | Open in IMG/M |
| 3300005328|Ga0070676_10191527 | Not Available | 1335 | Open in IMG/M |
| 3300005329|Ga0070683_101030380 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 790 | Open in IMG/M |
| 3300005331|Ga0070670_100664440 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 935 | Open in IMG/M |
| 3300005338|Ga0068868_101050709 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 747 | Open in IMG/M |
| 3300005366|Ga0070659_100106426 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2261 | Open in IMG/M |
| 3300005366|Ga0070659_100286666 | Not Available | 1371 | Open in IMG/M |
| 3300005457|Ga0070662_101998279 | Not Available | 501 | Open in IMG/M |
| 3300005458|Ga0070681_11365856 | Not Available | 632 | Open in IMG/M |
| 3300005459|Ga0068867_100025229 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0007 | 4264 | Open in IMG/M |
| 3300005547|Ga0070693_100469926 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Aquisediminimonas → Aquisediminimonas profunda | 886 | Open in IMG/M |
| 3300005548|Ga0070665_100041490 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. KRR8 | 4626 | Open in IMG/M |
| 3300005548|Ga0070665_101100424 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 806 | Open in IMG/M |
| 3300005564|Ga0070664_100555449 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 1062 | Open in IMG/M |
| 3300005564|Ga0070664_100875678 | Not Available | 841 | Open in IMG/M |
| 3300005614|Ga0068856_100479788 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SE220 | 1264 | Open in IMG/M |
| 3300005764|Ga0066903_101065557 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1486 | Open in IMG/M |
| 3300005841|Ga0068863_102409611 | Not Available | 536 | Open in IMG/M |
| 3300005843|Ga0068860_101515180 | Not Available | 692 | Open in IMG/M |
| 3300006175|Ga0070712_100325475 | All Organisms → cellular organisms → Bacteria | 1251 | Open in IMG/M |
| 3300006237|Ga0097621_101724213 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 596 | Open in IMG/M |
| 3300006881|Ga0068865_100005714 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 7561 | Open in IMG/M |
| 3300006904|Ga0075424_100593743 | Not Available | 1182 | Open in IMG/M |
| 3300006954|Ga0079219_11482871 | Not Available | 613 | Open in IMG/M |
| 3300009156|Ga0111538_10510440 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1524 | Open in IMG/M |
| 3300009162|Ga0075423_11434186 | Not Available | 740 | Open in IMG/M |
| 3300009177|Ga0105248_10062261 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 4190 | Open in IMG/M |
| 3300009545|Ga0105237_10555020 | Not Available | 1155 | Open in IMG/M |
| 3300010359|Ga0126376_11409749 | Not Available | 722 | Open in IMG/M |
| 3300010397|Ga0134124_10037791 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0007 | 4026 | Open in IMG/M |
| 3300012212|Ga0150985_109984954 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2623 | Open in IMG/M |
| 3300012212|Ga0150985_115289623 | Not Available | 829 | Open in IMG/M |
| 3300012955|Ga0164298_10474405 | Not Available | 829 | Open in IMG/M |
| 3300012961|Ga0164302_11482124 | Not Available | 558 | Open in IMG/M |
| 3300012988|Ga0164306_10751636 | Not Available | 780 | Open in IMG/M |
| 3300013102|Ga0157371_10138073 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0007 | 1736 | Open in IMG/M |
| 3300013296|Ga0157374_12313044 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 565 | Open in IMG/M |
| 3300013297|Ga0157378_10726782 | All Organisms → cellular organisms → Bacteria | 1014 | Open in IMG/M |
| 3300013297|Ga0157378_12625777 | Not Available | 556 | Open in IMG/M |
| 3300013306|Ga0163162_12834021 | Not Available | 558 | Open in IMG/M |
| 3300014497|Ga0182008_10853310 | Not Available | 532 | Open in IMG/M |
| 3300015371|Ga0132258_10224257 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 4575 | Open in IMG/M |
| 3300015371|Ga0132258_11062635 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales | 2046 | Open in IMG/M |
| 3300015372|Ga0132256_100385370 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 1501 | Open in IMG/M |
| 3300015372|Ga0132256_100457117 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales | 1384 | Open in IMG/M |
| 3300015373|Ga0132257_101768463 | Not Available | 793 | Open in IMG/M |
| 3300015373|Ga0132257_103785709 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 550 | Open in IMG/M |
| 3300015374|Ga0132255_102234159 | All Organisms → cellular organisms → Bacteria | 834 | Open in IMG/M |
| 3300015374|Ga0132255_103225890 | Not Available | 695 | Open in IMG/M |
| 3300017792|Ga0163161_11935248 | All Organisms → cellular organisms → Bacteria | 525 | Open in IMG/M |
| 3300025290|Ga0207673_1014609 | All Organisms → cellular organisms → Bacteria | 1037 | Open in IMG/M |
| 3300025900|Ga0207710_10099211 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → unclassified Sphingomonadales → Sphingomonadales bacterium | 1371 | Open in IMG/M |
| 3300025903|Ga0207680_10077512 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2079 | Open in IMG/M |
| 3300025909|Ga0207705_10505618 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 939 | Open in IMG/M |
| 3300025913|Ga0207695_11232311 | Not Available | 628 | Open in IMG/M |
| 3300025919|Ga0207657_10321735 | Not Available | 1223 | Open in IMG/M |
| 3300025919|Ga0207657_10959829 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. RB56-2 | 657 | Open in IMG/M |
| 3300025920|Ga0207649_10908483 | Not Available | 690 | Open in IMG/M |
| 3300025925|Ga0207650_10458816 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1061 | Open in IMG/M |
| 3300025931|Ga0207644_10061445 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 2721 | Open in IMG/M |
| 3300025932|Ga0207690_10375526 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 1129 | Open in IMG/M |
| 3300025932|Ga0207690_10595801 | All Organisms → cellular organisms → Bacteria | 902 | Open in IMG/M |
| 3300025932|Ga0207690_10600745 | All Organisms → cellular organisms → Bacteria | 898 | Open in IMG/M |
| 3300025938|Ga0207704_10524737 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 958 | Open in IMG/M |
| 3300025945|Ga0207679_11120268 | Not Available | 722 | Open in IMG/M |
| 3300025961|Ga0207712_10066472 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 2577 | Open in IMG/M |
| 3300025986|Ga0207658_11899966 | Not Available | 542 | Open in IMG/M |
| 3300026035|Ga0207703_11129412 | Not Available | 753 | Open in IMG/M |
| 3300026078|Ga0207702_10667833 | Not Available | 1023 | Open in IMG/M |
| 3300026088|Ga0207641_12155231 | Not Available | 558 | Open in IMG/M |
| 3300026891|Ga0208889_1004768 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CNPAF512 | 827 | Open in IMG/M |
| 3300027288|Ga0208525_1019486 | Not Available | 783 | Open in IMG/M |
| 3300027560|Ga0207981_1047250 | All Organisms → cellular organisms → Bacteria | 785 | Open in IMG/M |
| 3300027560|Ga0207981_1066156 | All Organisms → cellular organisms → Bacteria | 662 | Open in IMG/M |
| 3300028379|Ga0268266_10023400 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. KRR8 | 5261 | Open in IMG/M |
| 3300028381|Ga0268264_11238804 | Not Available | 756 | Open in IMG/M |
| 3300028592|Ga0247822_10072330 | Not Available | 2444 | Open in IMG/M |
| 3300031548|Ga0307408_100493281 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SE220 | 1071 | Open in IMG/M |
| 3300031824|Ga0307413_10106471 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SE220 | 1866 | Open in IMG/M |
| 3300032005|Ga0307411_10705063 | Not Available | 880 | Open in IMG/M |
| 3300032126|Ga0307415_101751764 | Not Available | 600 | Open in IMG/M |
| 3300032144|Ga0315910_10225208 | Not Available | 1412 | Open in IMG/M |
| 3300032179|Ga0310889_10566942 | Not Available | 582 | Open in IMG/M |
| 3300033412|Ga0310810_10468302 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1268 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 13.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 9.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 8.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 6.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 5.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 5.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 4.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 4.00% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 4.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 3.00% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 3.00% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 3.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 3.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 3.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 2.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 2.00% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 2.00% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 2.00% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 2.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 2.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 2.00% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.00% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 1.00% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.00% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 1.00% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 1.00% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 1.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.00% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 1.00% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300000789 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300001915 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 | Host-Associated | Open in IMG/M |
| 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Host-Associated | Open in IMG/M |
| 3300002239 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 | Host-Associated | Open in IMG/M |
| 3300002244 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 | Host-Associated | Open in IMG/M |
| 3300002568 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
| 3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
| 3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
| 3300005159 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPB | Environmental | Open in IMG/M |
| 3300005163 | Soil and rhizosphere microbial communities from Laval, Canada - mgHMB | Environmental | Open in IMG/M |
| 3300005168 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPC | Environmental | Open in IMG/M |
| 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 | Environmental | Open in IMG/M |
| 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
| 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
| 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
| 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Environmental | Open in IMG/M |
| 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Host-Associated | Open in IMG/M |
| 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Environmental | Open in IMG/M |
| 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
| 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
| 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
| 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
| 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) | Host-Associated | Open in IMG/M |
| 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
| 3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
| 3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
| 3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
| 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
| 3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
| 3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
| 3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
| 3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
| 3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
| 3300012988 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG | Environmental | Open in IMG/M |
| 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Host-Associated | Open in IMG/M |
| 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
| 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Host-Associated | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
| 3300025290 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 | Host-Associated | Open in IMG/M |
| 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026891 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPB (SPAdes) | Environmental | Open in IMG/M |
| 3300027288 | Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes) | Environmental | Open in IMG/M |
| 3300027560 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes) | Environmental | Open in IMG/M |
| 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028592 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30 | Environmental | Open in IMG/M |
| 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Host-Associated | Open in IMG/M |
| 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Host-Associated | Open in IMG/M |
| 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Host-Associated | Open in IMG/M |
| 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Host-Associated | Open in IMG/M |
| 3300032144 | Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil | Environmental | Open in IMG/M |
| 3300032179 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2 | Environmental | Open in IMG/M |
| 3300033412 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| INPhiseqgaiiFebDRAFT_1012229962 | 3300000364 | Soil | VFIRKLRPDERALGTADRIYLDRLERGNISWTGSVVVAGKEVFGASSAGFATILEAETDAIAWARRHGATDLQIEGPHS* |
| INPhiseqgaiiFebDRAFT_1056466087 | 3300000364 | Soil | MPTPCRRAIVSAGHGGGSLFIRKLRPGERAPDTVDRIYIGRVRDGRISWTGSVHAGGKAVLGASPADFATIQEAETDAIAWARGHGAIELQIEGPNG* |
| JGI1027J11758_129376502 | 3300000789 | Soil | MLSAGQGGHVFIRKLRPDERALGTADRIYLDRLERGNISWTGSVVVAGKEVFGASSAGFATILEAETDAIAWARRHGATDLQIEGPHS* |
| JGI24741J21665_10202144 | 3300001915 | Corn Rhizosphere | ILLYPRRQRGVSDMFIRKLKPGERASEEGDRISIARLSTGRISWSGLLDAGRTGVTAISPIDFPSIQEAETDAIAWARGHGATELQIEGPKI* |
| JGI24739J22299_100708664 | 3300001989 | Corn Rhizosphere | GVSDMFIRKLKPGERASEEGDRISIARLSTGRISWSGLLDAGRTGVTAISPIDFPSIQEAETDAIAWARGHGATELQIEGPKI* |
| JGI24034J26672_100243251 | 3300002239 | Corn, Switchgrass And Miscanthus Rhizosphere | VSDMFIRKLKPGERASEEGDRISIARLSTGRISWSGLLDAGRTGVTAISPIDFPSIQEAETDAIAWARGHGATELQIEGPKI* |
| JGI24742J22300_100748922 | 3300002244 | Corn, Switchgrass And Miscanthus Rhizosphere | MFIRKLKPGXRASEEGDRISIARLSTGRISWSGLLDAGRTGVTAISPIDFPSIQEAETDAIAWARGHGATELQIEGPKI* |
| C688J35102_1209593494 | 3300002568 | Soil | MFIRKLKPGERAPETADRICLDRLESGRISWTGLLDAGRKVVMAASRVDFASIQEAETDAIAWARGHGATELQIEGPSI* |
| Ga0063356_1057976402 | 3300004463 | Arabidopsis Thaliana Rhizosphere | VFIRKLKPGERAPETTDRIYIDRQVDGRIAWTGSVDVGGKAVLGASRSDFATIQEAETDAIAWAREQGTTELQIEGPNN* |
| Ga0062594_1005483134 | 3300005093 | Soil | EGDRISIARLSTGRISWSGLLDAGRTGVTAISPIDFPSIQEAETDAIAWARGHGATELQIEGPKI* |
| Ga0062594_1007383191 | 3300005093 | Soil | MLWFAPGLGERGVFIRKLQPGERAPDEADRICLSRLADGRISWTGSVDASGKAVCGVSLTDFATIQEAETDAIAWARARGTTKLQIEGPNQTLR* |
| Ga0066808_10084832 | 3300005159 | Soil | VFIRKLKPGERAPETTDRIYIDRLADGRISWTGSVDVGGKARLGASRVDFATIQEAETDAIAWARGQGTTELQIEGRNN* |
| Ga0066823_100195722 | 3300005163 | Soil | MGMGGHVFIRKLKPGERAPETADRICIDRLEDGRISWTGSVSVGGKAVLGASPADFSTIQEAETDAIAWARGHGATELQVEGPNP* |
| Ga0066823_100783672 | 3300005163 | Soil | VFIRKLKPGDRAPETTDRVFIDRLADGRISWTGSVDVGGKAVHGASPADFATIQEAETDAIAWARGHGATELQIEGPNI* |
| Ga0066809_100073952 | 3300005168 | Soil | VFIRKLKPGERAPETTDRIYIDRLADGRISWTGSVDVGGKARLGASRVDFATIQEAETDAIAWARGQGTTELQIEGPNN* |
| Ga0066809_101138462 | 3300005168 | Soil | VFIRKLKPGERAPETSDRIYIDRLADGRISWTGSVDVGGKAQLGASRADFATIQEAETDAIAWAREQGTTELQIEGPNN* |
| Ga0065707_101419891 | 3300005295 | Switchgrass Rhizosphere | VFIRKLKPGEQAPRTADRVCIDRLVDGRISWTGSLDVGGEAVFGTSPGDFATIQEAETDAISWARGHGATDLQIEGPNF* |
| Ga0070676_101915271 | 3300005328 | Miscanthus Rhizosphere | MFIRKLKPGERASEEGDRISIARLSTGRISWSGLLDAGRTGVTAISPIDFPSIQEAETDAIAWARGHGATELQIEGPKI* |
| Ga0070683_1010303801 | 3300005329 | Corn Rhizosphere | VFIRKLQPGERAPDEADRICLSRLADGRISWTGSVDASGKAVCGVSLTDFATIQEAETDAIAWARA |
| Ga0070670_1006644402 | 3300005331 | Switchgrass Rhizosphere | VFIRKLKPGERAPETSDRIYIDRMADGRISWTGSVDVGGKARLGASRTDFATIQEAETDAIAWARGQGTTELQIEGPNN* |
| Ga0068868_1010507092 | 3300005338 | Miscanthus Rhizosphere | VFIRKLQPGERAPDQADRICLSRLADGRISWTGSVDASGKAICGVSLTDFATIQEAETDAIAWARARGTT |
| Ga0070659_1001064261 | 3300005366 | Corn Rhizosphere | VFIRKLKPGDRASETADSIRIERLRDGRISWTASIDVSGSAVSGASRASFATIQEAETDAIAWARAQGATELQIEGPNA* |
| Ga0070659_1002866661 | 3300005366 | Corn Rhizosphere | GERAPDTADRIYIERLDDGRISWTGSVDVGGRAVSGASPVDFATIQEAETDAIAWARGHGATELQIEGPNA* |
| Ga0070662_1019982791 | 3300005457 | Corn Rhizosphere | MVAPGLGERGVFIRKLQPGERAPDEADRICLSRLADGRISWTGSVDASGKAVCGVSLTDFATIQEAETDAIAWARARGTTTLQIEGPNQTLR* |
| Ga0070681_113658561 | 3300005458 | Corn Rhizosphere | VFIRKLQPGERAPDTADRICINRLADGRISWTGSIDAGGRAVRGASPADFATVQEAETDAIAWARAR |
| Ga0068867_1000252298 | 3300005459 | Miscanthus Rhizosphere | RVFIRKLKPGERAPETTDRIYIDRQVDGRIAWTGSVDVGGKAVLGASRSDFATMQEAETDAIAWAREQGTTELQIEGPNN* |
| Ga0070693_1004699261 | 3300005547 | Corn, Switchgrass And Miscanthus Rhizosphere | VFIRKLRPGERAPETADRIYIDRLADGRISWTGSVDAAGKPVVGTSPTDFSTIQEAETDAIAWARSYGATDLQIEGPAL* |
| Ga0070665_1000414908 | 3300005548 | Switchgrass Rhizosphere | MFIRKLKPGERAAEEADRISIARLSTGRISWSCLLDAGRRAVMATSPIDFASIQEAETDAIAWARGHGATELQIEGPKI* |
| Ga0070665_1011004241 | 3300005548 | Switchgrass Rhizosphere | MFIRKLKPGERASEEGDRISIARLSTGRISWSGLLDAGRTGVTAISPIDFPSIQEAETDAIAWARGHGA |
| Ga0070664_1005554492 | 3300005564 | Corn Rhizosphere | VFIRKLQPGERAPDEADRICLSRLADGRISWTGSVDASGKAVCGVSLTDFATIQEAETDAIAWARARGTTKLQIEGPNQTLR* |
| Ga0070664_1008756781 | 3300005564 | Corn Rhizosphere | VFIRKLKPGERAPATVDRITINRLADGQISWIGLVGARGTAVSGASPAAFETVQEAETDAIAWARARGTTNLQIEGPHGTLS |
| Ga0068856_1004797882 | 3300005614 | Corn Rhizosphere | VFIRKLRPGERAPETADRIYIDRLADGRISWTGSVEASGKPVVGTSPTDFSTIQEAETDAIAWARSYGATDLQIEGPAL* |
| Ga0066903_1010655572 | 3300005764 | Tropical Forest Soil | VYIRRLRPGERAPDTADRININRLEGGRISWTGSVEAGGKAVLGASPGDFATIQEAETDAIAWAKGHGATELQIEGPNI* |
| Ga0068863_1024096111 | 3300005841 | Switchgrass Rhizosphere | GERGVFIRKLQPGERAPDQADRICLSRLADGRISWTGSVDASGKAICGVSLTDFATIQEAETDAIAWARARGTTKLQIEGPNQTLR* |
| Ga0068860_1015151802 | 3300005843 | Switchgrass Rhizosphere | LYIKKLKPGDRAPDTSDRIYIDRLADGRIAWTGSLGAGRRTVLGASPGDFATVQEAETDAIAWARGQGTTELQIEGPNP* |
| Ga0070712_1003254751 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | YDLPTCYHGVGHGGGSLFIRKLRPGERAPETADRIYIGRVEDGRISWTGSVYAGGKAVLGASPADFATIQEAETDAIAWARGHGAIELQIEGPNG* |
| Ga0097621_1017242132 | 3300006237 | Miscanthus Rhizosphere | VFIRKLQPGERAPDQADRICLSRLADGRISWTGSVDASGKAICGVSLTDFATIQEAETDAIAWARARGTTK |
| Ga0068865_1000057144 | 3300006881 | Miscanthus Rhizosphere | MFIRKLKPGERASEEGDRISIARLSTGRISWSGLLDAGRTGVTVISPIDFPSIQEAETDAIAWARGHGATELQIEGPKI* |
| Ga0075424_1005937431 | 3300006904 | Populus Rhizosphere | VFIRKLRPGERALNNADRIYIERLTDGRICWSGSVHAGGKAVLGASPTDFATIQEAETDAIAWARGHGTTKLEIEGPNA* |
| Ga0079219_114828712 | 3300006954 | Agricultural Soil | VVIRKLRPGKSAPEAANRIHIDRLADGRISWTGSVESAGRAVFGTSPTGFSTIQEAETDAIAWARRYGATDLQIEGPNP* |
| Ga0111538_105104401 | 3300009156 | Populus Rhizosphere | GGRVFIRKLKPGERAPETTDRIYIDRQVDGRIAWTGSVDVGGKAVLGASRSDFATIQEAETDAIAWAREQGTTELQIEGPNN* |
| Ga0075423_114341862 | 3300009162 | Populus Rhizosphere | RALNNADRIYIERLTDGRICWSGSVHAGGKAVLGASPTDFATIQEAETDAIAWARGHGTTKLEIEGPNA* |
| Ga0105248_100622616 | 3300009177 | Switchgrass Rhizosphere | MLWFAPGLGERGVFIRKLQPGERAPDEADRICLSRLADGRISWTGSVDASGKAVCGVSLTDFATIQEAETDAIAWARARGTTTLQIEGPNQTLR* |
| Ga0105237_105550201 | 3300009545 | Corn Rhizosphere | PREIVNHSLIPPTTTGVSDMFIRKLKPGERASEEGDRISIARLSTGRISWSGLLDAGRTGVTAISPIDFPSIQEAETDAIAWARGHGATELQIEGPKI* |
| Ga0126376_114097492 | 3300010359 | Tropical Forest Soil | VFIRKLKPGERALETADRICIIERGAGGRLSWIGSLAAGGKGLSGCGRTDFATVQEAETDAIAWARAHGADELQIEGPNIW* |
| Ga0134124_100377914 | 3300010397 | Terrestrial Soil | MGMGGNVFIRKLKPGERAPDTADRIYIERLDDGRISWTGSVDVGGRAVSGASPVDFATIQEAETDAIAWARGHGATELQIEGPNA* |
| Ga0150985_1099849544 | 3300012212 | Avena Fatua Rhizosphere | AAVFIRKLQPGERAPDTADRICINRLADGRISWTGSVEAGGKAVRGASPADFATVQEAETDAIAWARARGTTELQIEGPNQTQA* |
| Ga0150985_1152896231 | 3300012212 | Avena Fatua Rhizosphere | RVFIRKLKPGESASEAVDRVHVERLPNGRMSWTGTIHVGGKVRSGASRADFSTIQEAETDAIAWARGHGATELQVEGPNI* |
| Ga0164298_104744052 | 3300012955 | Soil | MFIRKLRPGERAPDSVDRIHIDRLTDGRISWTGSVAAAGKAILGAGSINFPTIQEAETDAIAWARRYGATDLQIEGPKA* |
| Ga0164302_114821241 | 3300012961 | Soil | MFIRKLRPGERAPEKVDRVCLDRLQSGRISWTGLLDARKKAVMAASPVDFATVQEAETDAIAWARGHGATELQIEGTSF* |
| Ga0164306_107516362 | 3300012988 | Soil | VLPSRMLWFVPGLGDRGVFIRKLQPGERAPDEADRICLSRLADGRISWTGSVDASGKAICGVSRTDFATIQEAETDAIAWARARGTTTLQIEGPNQTLR* |
| Ga0157371_101380733 | 3300013102 | Corn Rhizosphere | MGMGGNVFIRKLKPGERAPDTADRIYIERLDDGRISWTGSVDVSGRAVSGASPVDFATVQEAETDAIAWARGHGATELQIEGPNA* |
| Ga0157374_123130441 | 3300013296 | Miscanthus Rhizosphere | VFIRKLQPGERAPDEADRICLSRLADGRISWTGSVAASGKAVCGVSLTDFATIQEAETDAIAWARARGTTTLQIEGPNQTLR* |
| Ga0157378_107267823 | 3300013297 | Miscanthus Rhizosphere | VFIRKLKPGERAPETTDRIYIDRQVDGRIVWTGSVDVGGKAVLGASRSDFATIQEAETDAIAWAREQGTTELQIEGPNN |
| Ga0157378_126257772 | 3300013297 | Miscanthus Rhizosphere | VFIRKLRPGERAPETADRIYIDRLADGRISWTGSVEAAGKPVVGTSPTDFSTIQEAETDAIAWARSYGATDLQIEGPAL |
| Ga0163162_128340211 | 3300013306 | Switchgrass Rhizosphere | MGIGGRVFIRKLKPGERAPETADRIYIERLGDGRISWTGSVDVAGKAVFGASSADFATIQEAETDAIAWARGHGATELQIEGPNA* |
| Ga0182008_108533101 | 3300014497 | Rhizosphere | MFIRKLQPGERAPDEADRICINRLADGRISWTGSIDASGKAVHGASRTDFATIQEAETDAIAWARGRGTAKLQIEGPNQTLR* |
| Ga0132258_102242576 | 3300015371 | Arabidopsis Rhizosphere | VYIRKLKPGERAPETLDHVIINRLADGRISWSGSVDLAGKPVLGASPSNFATIQEAETDAIAWARKQGATELQIEGPSA* |
| Ga0132258_110626355 | 3300015371 | Arabidopsis Rhizosphere | VFIRKLKPGERAPETTDRIYIDRMADGRISWTASVDVGGKARLGASRSDFATIQEAETDAIAWARGQGTTELQIEGPNN* |
| Ga0132256_1003853702 | 3300015372 | Arabidopsis Rhizosphere | VFIRKLQPGERAPDQADRICLSRLADGRISWTGSVDASGKAICGVSLTDFATIQEAETDAIAWARARGTTKLQIEGPNQTLR* |
| Ga0132256_1004571172 | 3300015372 | Arabidopsis Rhizosphere | VFIRKLKPGERAPETTDRIYIDRMADGRISWTASIDVGGKARLGASRSDFATIQEAETDAIAWARGQGTTELQIEGPNN* |
| Ga0132257_1017684632 | 3300015373 | Arabidopsis Rhizosphere | VFIRKLKPGERAAETADRIYIHRLEDGRISWTGSVDVSGKAACGASPADFATIQEAETDAIAWARGHGATELQIEGPNA* |
| Ga0132257_1037857091 | 3300015373 | Arabidopsis Rhizosphere | IRKLRPGERAPEKVDRVCLDRLQSGRISWTGLLDARKKAVMAASPVDFATVQEAETDAIAWARGHGATELQIEGPSF* |
| Ga0132255_1022341592 | 3300015374 | Arabidopsis Rhizosphere | VYIRKLKPGERAPETLDHVIINRLADGRISWSGSVDLAGKPVLGASPSNFATIQEAETDAIAWARKQGATELQIEGP |
| Ga0132255_1032258901 | 3300015374 | Arabidopsis Rhizosphere | AAFPPNPVTTRTAARTLASPDRVLPSRMLWFAPGLGDRGVFIRKLQPGERAPDEADRICLSRLADGRISWTGSVDASGKAVCGVSLTDFATIQEAETDAIAWARARGTTTLQIEGPNQTLR* |
| Ga0163161_119352481 | 3300017792 | Switchgrass Rhizosphere | VFIRKLKPGERAPETTDRIYIDRQVDGRIAWTGSVDVGGKAVLGASRSDFATIQEAETDAIAWAREQGTTELQIEWTNN |
| Ga0207673_10146092 | 3300025290 | Corn, Switchgrass And Miscanthus Rhizosphere | VFIRKLKPGERAPETTDRIYIDRQVDGRIAWTGSVDVGGKAVLGASRSDFATIQEAETDAIAWAREQGTTELQIEGPNN |
| Ga0207710_100992111 | 3300025900 | Switchgrass Rhizosphere | AWGSRLYIKKLKPGDRAPDTSDRIYIDRLADGRIAWTGSLGAGRRTVLGASPGDFATVQEAETDAIAWARGQGTTELQIEGPNP |
| Ga0207680_100775122 | 3300025903 | Switchgrass Rhizosphere | MFIRKLKPGERASEEGDRISIARLSTGRISWSGLLDAGRTGVTAISPIDFPSIQEAETDAIAWARGHGATELQIEGPKI |
| Ga0207705_105056182 | 3300025909 | Corn Rhizosphere | VFIRKLQPGERAPDEADRICLSRLADGRISWTGSVDASGKAVYGVSLTDFATIQEAETDAIAWARARGTTKLQIEGPNQTLR |
| Ga0207695_112323111 | 3300025913 | Corn Rhizosphere | KPGERASEEGDRISIARLSTGRISWSGLLDAGRTGVTAISPIDFPSIQEAETDAIAWARGHGATELQIEGPKI |
| Ga0207657_103217351 | 3300025919 | Corn Rhizosphere | VFIRKLQPGERAPDEADRICLSRLADGRISWTGSVDASGKAVCGVSLTDFATIQEAETDAIAWARARGTTTLQIEGPNQTLR |
| Ga0207657_109598291 | 3300025919 | Corn Rhizosphere | VFIRKLKPGERAPDTADRIYIERLDDGRISWTGSVDVGGRAVSGASPVDFATIQEAETDAIAWARGHGATELQIEGQNA |
| Ga0207649_109084831 | 3300025920 | Corn Rhizosphere | VFIRKLQPGERAPDEADRICLSRLADGRISWTGSVDASGKAVCGVSLTDFATIQEAETDAIAWARARGTTKLQIEGPNQTLR |
| Ga0207650_104588161 | 3300025925 | Switchgrass Rhizosphere | VFIRKLKPGERAPETSDRIYIDRMADGRISWTGSVDVGGKARLGASRTDFATIQEAETDAIAWARGQGTTELQIEGPNN |
| Ga0207644_100614452 | 3300025931 | Switchgrass Rhizosphere | VFIRKLQPGERAPDQADRICLSRLADGRISWTGSVDASGKAICGVSLTDFATIQEAETDAIAWARARGTTKLQIEGPNQTLR |
| Ga0207690_103755262 | 3300025932 | Corn Rhizosphere | MLWFAPGLGERGVFIRKLQPGERAPDEADRICLSRLADGRISWTGSVDASGKAVCGVSLTDFATIQEAETDAIAWARARGTTKLQIEGPNQTLR |
| Ga0207690_105958011 | 3300025932 | Corn Rhizosphere | GERAPDTADRIYIERLDDGRISWTGSVDVGGRAVSGASPVDFATIQEAETDAIAWARGHGATELQIEGPNA |
| Ga0207690_106007453 | 3300025932 | Corn Rhizosphere | VFIRKLKPGDRASETADSIRIERLRDGRISWTASIDVSGSAVSGASRASFATIQEAETDAIAWARAQGATELQIEGPNA |
| Ga0207704_105247373 | 3300025938 | Miscanthus Rhizosphere | MFIRKLKPGERASEEGDRISIARLSTGRISWSGLLDAGRTGVTVISPIDFPSIQEAETDAIAWARGHGATELQIEGPKI |
| Ga0207679_111202681 | 3300025945 | Corn Rhizosphere | VFIRKLKPGERAPATVDRITINRLADGQISWIGLVGARGTAVSGASPAAFETVQEAETDAIAWARARGTTNLQIEGPHGTLSYCLPSTQARRSS |
| Ga0207712_100664723 | 3300025961 | Switchgrass Rhizosphere | KLKPGERAPETTDRIYIDRQVDGRIAWTGSVDVGGKAVLGASRSDFATIQEAETDAIAWAREQGTTELQIEGPNN |
| Ga0207658_118999661 | 3300025986 | Switchgrass Rhizosphere | VAPGLGERGVFIRKLQPGERAPDEADRICLSRLADGRISWTGSVDASGKAVCGVSLTDFATIQEAETDAIAWARARGTTKLQIEGPNQTLR |
| Ga0207703_111294121 | 3300026035 | Switchgrass Rhizosphere | MVAPGLGERGVFIRKLQPGERAPDEADRICLSRLADGRISWTGSVDASGKAVCGVSLTDFATIQEAETDAIAWARARGTTKLQIEGPNQTLR |
| Ga0207702_106678331 | 3300026078 | Corn Rhizosphere | VFIRKLRPGERAPETADRIYIDRLADGRISWTGSVEASGKPVVGTSPTDFSTIQEAETDAIAWARSYGATDLQIEGPAL |
| Ga0207641_121552311 | 3300026088 | Switchgrass Rhizosphere | LASPDRVLPSRMLWFAPGLGERGVFIRKLQPGERAPDEADRICLSRLADGRISWTGSVDASGKAVCGVSLTDFATIQEAETDAIAWARARGTTKLQIEGPNQTLR |
| Ga0208889_10047681 | 3300026891 | Soil | VFIRKLKPGERAPETTDRIYIDRLADGRISWTGSVDVGGKARLGASRVDFATIQEAETDAIAWARGQGTTELQIEGRNN |
| Ga0208525_10194861 | 3300027288 | Soil | VFIRKLKPGDRAPETTDRVFIDRLADGRISWTGSVDVGGKAVHGASPADFATIQEAETDAIAWARGHGATELQVEGPNP |
| Ga0207981_10472502 | 3300027560 | Soil | VFIRKLKPGERAPETTDRIYIDRLADGRISWTGSVDVGGKARLGASRVDFATIQEAETDAIAWARGQGTTELQIEGPNN |
| Ga0207981_10661562 | 3300027560 | Soil | VFIRKLKPGERAPETSDRIYIDRLADGRISWTGSVDVGGKAQLGASRADFATIQEAETDAIAWAREQGTTELQIEGPNN |
| Ga0268266_100234008 | 3300028379 | Switchgrass Rhizosphere | MFIRKLKPGERAAEEADRISIARLSTGRISWSCLLDAGRRAVMATSPIDFASIQEAETDAIAWARGHGATELQIEGPKI |
| Ga0268264_112388042 | 3300028381 | Switchgrass Rhizosphere | LYIKKLKPGDRAPDTSDRIYIDRLADGRIAWTGSLGAGRRTVLGASPGDFATVQEAETDAIAWARGQGTTELQIEGPNP |
| Ga0247822_100723305 | 3300028592 | Soil | VYIRKLKPGERAPETLDHVIINRLADGRISWSGSVDLAGKPVLGASPSNFATIQEAETDAIAWARKQGATELQIEGPSA |
| Ga0307408_1004932811 | 3300031548 | Rhizosphere | WTDAGLWLGGICATTEGGDVFIRKLKPGERAAGSADRIYIDRLEDGRISWTGSIGVGGKAVLGGSPTNFGTIQEAETDAIAWARAHGATEIQIEGPRL |
| Ga0307413_101064713 | 3300031824 | Rhizosphere | VFIRKLKPGERAAGSADRIYIDRLEDGRISWTGSIGVGGKAVLGGSPTNFGTIQEAETDAIAWARAHGATEIQIEGPRL |
| Ga0307411_107050632 | 3300032005 | Rhizosphere | VFIRKLTPGERAPDTADRICIDRLTDGRISWTGSIRAGGKTVLGASPTAFATVQEAETDAIAWARGKGATELQIEGPKA |
| Ga0307415_1017517642 | 3300032126 | Rhizosphere | ERAPDTADRICIDRLTDGRISWTGSIRAGGKTVLGASPTAFATVQEAETDAIAWARGKGATELQIEGPKA |
| Ga0315910_102252081 | 3300032144 | Soil | VYIRKLKPGERAPETLDHVIINRLADGRISWSGSVDLAGKPVLGASPSNFATIQEAETDAIAWARKQGATELQ |
| Ga0310889_105669422 | 3300032179 | Soil | VFIRKLKPGERAPESADRVYIDRSGEGRISWTATVAVGGKAVFGASPADFATIQEAETDAIAWAREHGATELQIEGPNI |
| Ga0310810_104683022 | 3300033412 | Soil | VFIRKLKPGERAAEKADRICIDRLGDGRISWTGSVDVGGKAVISSSPADFATIQEAETDAIAWARVHGATELQIEGPHA |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |